>input_sequence_27747
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-----------------------------------------------------ATGAGGTTGTGGTCTCTCCTTCTTCTT
CTTGTTTGCTTGCCTACGCTGATCGTGTCGGAAGATTACTCCGATGTAACCGTCATCGTACGGGGCTCCAAGACGATCGC
TGCGACCAGTGATGAGTTTATTTGTGCTACCCTTGATTGGTGGCCTCCGGAGAAGTGCAACTATGATCAGTGCCCATGGG
GAAAGGCTTCTATCTTGAATATGGTAGGTCCTGAATCCCAAGAATACTCTTATTAATCACATGAATTTGGATTTTATGCA
AATTACTAAGTTTGGTCTTTCTCCGAATTTCCAGGACTTGACTAATCCGTTGCTAGCTAAAGCTATCCAGGGTTAGTGTT
CTGACCATTGTCAATTGAAGAATTTTCTACTTATCAGTTACAGCTCCCCTATTTTCTACTGTAATTTGTTCCCCCACCTT
TC------------------------------------------------------------------------------
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-------------------------------------------------AATGGAAAGAAACGCAAAGTCTTTGCGTTTT
CTCGGAAAAAGAAAACTACTCCCTATGGAGGCTCAGTTTATTCTTAAATTTTTGGAAGGGTAAAATATCCTTCTGAGTCA
TTTACAACCTAGCATCTAACAATAATTGAGCTGCCACTCAAATATCCTTGTGAATCTTCACTAAGCAAGTTTTTCC--TT
TTTGTGTAGCCAGTTTCTTCACCTTTTTGTTTACCGTCTTTTCATAACGGTCTAGTTTATGGTCTTGATGGCACCTCATC
TTCTTCCCCTGATGAATATTTCTGCCGAATTTATTCTTGTAGCTTTTAGCCCACTACGCATCAGAGTCGGAGGCTCCTTA
CAAGATCAAGTGGTATATGAAACACCAAATTTAGGATCTCCATGCAGACCATTTACAAAGGCTTCAAGTGGCTTGTTTGG
ATTTTCTAAAGGATGCATAACCATGGAAAGATGGGATGCAATGAATGATCTGTTCCTCAATACAGGGTGAATGCCTTTGC
CAGTTGCTTATCTTTAGGAATTTCCATCTATATTTTCTTCTAAGCGAGTTGTGATTGATTACATCAGACTTCTGAACATG
CAACATATATTATGGGATAAAGTATTAGTGCATTAAAAATAC-CCCCATCATCTTTCTTTTAAAATCTTAGCAGCGTATA
ATAATATATGCAGTGCATTTTCTAATTATTTTTTGTTTAATTTCTTCAGTGCAGTTATTACTTTTGGTCTTAATGCACTT
CGAGGGCGAAAGCAGATACGCAAAGGTGTTTGGGGAGGTGCTTGGAATTCAAGCAACGCTCAGGAGTTTATGGGGTATAC
TGTTTCAATGAACTATCCTATTGATTCATGGGAATTTGGTAATACATTGTCAAACCCAAAACTATATTTGCTGCTCGCAA
AGCAAGGAACATCTTTCATGTGTGCAAAGCGCTATATAAGTAACTATGCTCATTTACTAGGTAATGAACTGAGTGGAAGT
GGAATCGGTGCAAGCGTGGGAGCTGAACAATACGGAAAAGACCTGGTTGAACTTCAAAAGATCGTCAATCAGTTATATGA
AAACTCTAGCAAACCATTGGTGCTAGCCCCAGGAGGATTCTATGACAAACAATGGTTTGCTAAGCTCCTTGACGTCTCTG
GGCCAAATGTTGTCAGAGGAATGACTCACCATATTTACAATCTTGGTGCTGGTGAGTGTTTTTTCAGTTCTTGGTAGTAC
ACCTTAATTCTTTCTATTTTTTCTCCTATATCAAAGATGGCACAAGATAATTTATTCAATCTTGATTAGGTAATGATCCA
CATGTGGCCAATAGAATCTTGGACCCGCAGTATTTAAGCAGGGTTTCAGACACATTCAGAGATCTCCAGCTCACGATACA
ACGACATGGACCATGGTCGGCTCCGTGGGTCGGGGAAGCTGGCGGAGCGTATAACAGCGGCAGCCGTACCGTTTCCAATA
CTTTCCTGGATAGCTTCTGGTAATTACTTGTCAGAAGAACAAATGACTATCACGGCCATCACTCTTCTCGTGTCTTCTCA
TCCTGAAATTTGTTGTTTTAACTAGGTATCTTGATCAACTTGGTCAGTCAGCAAAGTATGACACCAAGGTCTACTGCAGA
CAGACTTTAATTGGAGGCAACTATGGCCTCCTCGACACCGATACTTACGTGCCGAACCCTGATTACTACAGGCAAGTATC
TGTAGTGTATATTCCTGCCAGAAACATACTTTACCGTTCGCATACGCTTCAGATTACTAAACTTTGATAAATGTTCAGTG
CCTTGTTGTGGCATCGACTAATGGGGAATGGAGTTCTTTCCATAGACTTCGGCGGTACTTCATACTTGCGTGCCTATGCG
CATTGCGGAAAGCAGAAGGTAAGAGTGGCCCCATGAGATTGATTTAGGCTTGGTAAACATAGCAGAGTGCTGTGACTTTA
GTCACTGGTTGGCTGATTGGTGTGCTCT-----------TTTCAGGGCGGTATCGCTCTCCTCTTGATCAACCTGAGCCA
AAACATGGGGTCCATGGTCACCGTCAGGAATGACCTCAACGTCGGCCTAGCGCAAGGGCAGGGGATAACAAGGGACAGCT
CCTTTGTTCATGGCCTGAAGAGGACGGTCTCCTGGGTCGGGAGCAAAGCCTCCGATGGGCTGGAGAAGAGGGAAGAATAC
CACCTGACGGCTCAAGACGGGAACCCTCTTGCGCGCACCATGCTGCTGAACGGAGTTCCTCTGGAGCTCACTGAGGATGG
TGACATCCCTCCGATGTACCCGGTGCAAGTTTCTGCCAGTTCGCCGATCTATGTCGCACCGCTGTCCATTGCCTTTGTCG
TCTTCCCAGATTTTGAGGCTGACGCTTGCTAG------------------------------------------------
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------------------------------
>chr5B_1_TraesCS5B01G080400
AGGCCACCCCTAGAGGGTTGTGCCAGTTCCCCCAAAGCCTATTGTCTTACACAAAGGGAGAGATATAAAGAGGACCAG--
----ACCTCCGGATTTTTCCTCCTTCAAGAATCTCTCTC--TCTCTCTCTCGGAGGAGCACCGCTCGACTCTTTGCAGCC
TCTGACAAACGGCGCCGGCGACGGCGAGGATCTCCGGGCGAAGGAAGCCATATTTTCCTTTGATCCGCTGGGCCCCATTC
TGGTCGCAGAGACCTGTCACTTCTTCGAGCATTAGTTTTTTTCCTGTGACTCTCCGAGCGGGCTCCGGAGCATCCCTTGG
CTTGGCTGTGATCTCCAGGTAATTAATGGCCCTCGTCTCCGTTTCCGTTTGCTTTCGCCTTCTCTGCACAGCCTAGCTTG
CAAATCTGCAGCAAATCGCCACTGCGCCCGGCTTGGTTTTACTTGCTTCAATAGATTCGATACTGTTTAGGTGTATGTTG
GGAAAGGAGTTGGTGTTGCTTAGTTTCATTCTCTGAACAACTGCTACTAGAGCCGTAGAGCGTGTTCTTGCTCCGTTGGA
GCTTCAGATTCAGCTGGATTTCGATGTGCTCAAAT-TTGAGCGCAACAGGTAGTACAGGTTTGTAGATCATTTCTTCAGT
ATCTTTGGGGCAATTTGTTAAAAAATG---ATAATGTTTTCAACTTTACCCTCCGATTGATGAAGTTCAAAATCTTGAAA
GAAACATGCAAAGTGGAAAACATTTTTGTAAAATGTGAGTTAAAATGGCGTTTCATCAGCGACGAATCGTACATGAATAA
AGCTAAGCTGATAATGAATTGACCTGTTAAAACTTGGAAAAAGGTGACATATGGAAG-AAAATGGGCCTGTGGCTGTCAC
TTTCAGCTATGCCAACAGAGCAGGAATTTGGACCTTTCCATACCAACTAATCACGTTATTTAAAGAGCATGATAAGCCTG
AACCGCTCTAGTTGTCTATTTGGTGGACAACACCATTTGCAGGTGGTGAAAGCATGAGGTTGTGGTCTCTCCTTCTTCTT
CTTGTTTGCTTGCCTACGCTGATCGTGTCGGAAGATTACTCCGATGTAACCGTCATCGTACGGGGCTCCAAGACGATCGC
TGCGACCAGTGATGAGTTTATTTGTGCTACCCTTGATTGGTGGCCTCCGGAGAAGTGCAACTATGATCAGTGCCCATGGG
GAAAGGCTTCTATCTTGAATATGGTAGGTCCTGAATCCCAAGAATACTCTTATTAATCACATGAATTTGGATTTTATGCA
AATTACTAAGTTTGGTCTTTCTCCGAATTTCCAGGACTTGACTAATCCGTTGCTAGCTAAAGCTATCCAGGGTTAGTGTT
CTGACCATTGTCAATTGAAGAATTTTCTACTTATCAGTTACAGCTCCCCTATTTTCTACTGTAATTTGTTCCCCCACCTT
TC------------------------------------------------------------------------------
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-------------------------------------------------AATGGAAAGAAACGCAAAGTCTTTGCGTTTT
CTCGGAAAAAGAAAACTACTCCCTATGGAGGCTCAGTTTATTCTTAAATTTTTGGAAGGGTAAAATATCCTTCTGAGTCA
TTTACAACCTAGCATCTAACAATAATTGAGCTGCCACTCAAATATCCTTGTGAATCTTCACTAAGCAAGTTTTTCC--TT
TTTGTGTAGCCAGTTTCTTCACCTTTTTGTTTACCGTCTTTTCATAACGGTCTAGTTTATGGTCTTGATGGCACCTCATC
TTCTTCCCCTGATGAATATTTCTGCCGAATTTATTCTTGTAGCTTTTAGCCCACTACGCATCAGAGTCGGAGGCTCCTTA
CAAGATCAAGTGGTATATGAAACACCAAATTTAGGATCTCCATGCAGACCATTTACAAAGGCTTCAAGTGGCTTGTTTGG
ATTTTCTAAAGGATGCATAACCATGGAAAGATGGGATGCAATGAATGATCTGTTCCTCAATACAGGGTGAATGCCTTTGC
CAGTTGCTTATCTTTAGGAATTTCCATCTATATTTTCTTCTAAGCGAGTTGTGATTGATTACATCAGACTTCTGAACATG
CAACATATATTATGGGATAAAGTATTAGTGCATTAAAAATAC-CCCCATCATCTTTCTTTTAAAATCTTAGCAGCGTATA
ATAATATATGCAGTGCATTTTCTAATTATTTTTTGTTTAATTTCTTCAGTGCAGTTATTACTTTTGGTCTTAATGCACTT
CGAGGGCGAAAGCAGATACGCAAAGGTGTTTGGGGAGGTGCTTGGAATTCAAGCAACGCTCAGGAGTTTATGGGGTATAC
TGTTTCAATGAACTATCCTATTGATTCATGGGAATTTGGTAATACATTGTCAAACCCAAAACTATATTTGCTGCTCGCAA
AGCAAGGAACATCTTTCATGTGTGCAAAGCGCTATATAAGTAACTATGCTCATTTACTAGGTAATGAACTGAGTGGAAGT
GGAATCGGTGCAAGCGTGGGAGCTGAACAATACGGAAAAGACCTGGTTGAACTTCAAAAGATCGTCAATCAGTTATATGA
AAACTCTAGCAAACCATTGGTGCTAGCCCCAGGAGGATTCTATGACAAACAATGGTTTGCTAAGCTCCTTGACGTCTCTG
GGCCAAATGTTGTCAGAGGAATGACTCACCATATTTACAATCTTGGTGCTGGTGAGTGTTTTTTCAGTTCTTGGTAGTAC
ACCTTAATTCTTTCTATTTTTTCTCCTATATCAAAGATGGCACAAGATAATTTATTCAATCTTGATTAGGTAATGATCCA
CATGTGGCCAATAGAATCTTGGACCCGCAGTATTTAAGCAGGGTTTCAGACACATTCAGAGATCTCCAGCTCACGATACA
ACGACATGGACCATGGTCGGCTCCGTGGGTCGGGGAAGCTGGCGGAGCGTATAACAGCGGCAGCCGTACCGTTTCCAATA
CTTTCCTGGATAGCTTCTGGTAATTACTTGTCAGAAGAACAAATGACTATCACGGCCATCACTCTTCTCGTGTCTTCTCA
TCCTGAAATTTGTTGTTTTAACTAGGTATCTTGATCAACTTGGTCAGTCAGCAAAGTATGACACCAAGGTCTACTGCAGA
CAGACTTTAATTGGAGGCAACTATGGCCTCCTCGACACCGATACTTACGTGCCGAACCCTGATTACTACAGGCAAGTATC
TGTAGTGTATATTCCTGCCAGAAACATACTTTACCGTTCGCATACGCTTCAGATTACTAAACTTTGATAAATGTTCAGTG
CCTTGTTGTGGCATCGACTAATGGGGAATGGAGTTCTTTCCATAGACTTCGGCGGTACTTCATACTTGCGTGCCTATGCG
CATTGCGGAAAGCAGAAGGTAAGAGTGGCCCCATGAGATTGATTTAGGCTTGGTAAACATAGCAGAGTGCTGTGACTTTA
GTCACTGGTTGGCTGATTGGTGTGCTCT-----------TTTCAGGGCGGTATCGCTCTCCTCTTGATCAACCTGAGCCA
AAACATGGGGTCCATGGTCACCGTCAGGAATGACCTCAACGTCGGCCTAGCGCAAGGGCAGGGGATAACAAGGGACAGCT
CCTTTGTTCATGGCCTGAAGAGGACGGTCTCCTGGGTCGGGAGCAAAGCCTCCGATGGGCTGGAGAAGAGGGAAGAATAC
CACCTGACGGCTCAAGACGGGAACCCTCTTGCGCGCACCATGCTGCTGAACGGAGTTCCTCTGGAGCTCACTGAGGATGG
TGACATCCCTCCGATGTACCCGGTGCAAGTTTCTGCCAGTTCGCCGATCTATGTCGCACCGCTGTCCATTGCCTTTGTCG
TCTTCCCAGATTTTGAGGCTGACGCTTGCTAGCGATGAACTGTAGTTTTTAGATAGGATACCATGCGAGTTTTTCAGCTA
CAACAATATAGCCCTGATCAACTCTACTAATACTGAAAATGGTTTGTGTTGATGTGTTCTGCCCCAATTGGGCCATCTAT
GTTCAACAAATTCACAATAAAGAAAAGCTCGAAAACTTTCTCCTGATATCTATCAAAACTTTCAGAAAGAGATTGTCTCC
TACTCCCTCTATAAAGAAATATAAGAGCGTTTAGATCGCTAAATGCTCTTATATTTCTTTACAGAGGGAATACTTCATAA
GAAATTGAAGAACAAGAATCATACAGA----------------------------AATAATTATAAACTGCTGCTGATCA
ACCCACCAACCAGCATACATTGAAGTCGCTGCTTCTACTTTAAACACTAAGCTGGCCTTTGTTTGAGCTGCAGCTACTGA
TTCTCGGACTCTAGGCCTTCCAAAATCCGAATCTCAAACAAACACATCAGATTCCAAGCTAGCTTGCTAGAATCGATTCT
ACAAACTTAACTACCAGGCAAGAGAATCCGGAAGCTGCGATTTTGGTGATTCAGCCAATTCTGCAGCTTCCCACAAAAGA
AAACGGTTCAGTTTGAGCCCTTGCCCCTGTTTCCAGTCAAAATTACAATATGGTCAAATGACCGATACA-TCATATGCAA
AATAACCTGAGA---------AATTTCAGATAGAAAAGACCCAAGACATGGAATGAAAAGCAAGTATTTCATTTGAGATG
ATCACCATAAATATATCAGAAACACTGGGTGCAAAATGTACAGGCATGTTTTTCGCAAAATCAAAATTTGACCCTCCTCA
CATGGTGAACTGTATACTCACTCTCCAGCAATTACAGAAGTGATGGGACTATCATCAACTCTGCCAAATCAGGCAATTTA
TAATACTCCATCAAGTACAAAAGAACCATCCTAAACAATAGTGTAATTTCATGAGCTATGATACAAATGGAATAAACAAA
AGGAAAGGGATCCTCGTGTAAATGGGAACA
>chr5A_52
CAAAGG-----------------------------------------------------GAGATATAAAGAGGACC-G--
----ACCTCCAGATTTTTCTTCCTTCAAGAATCTCTCTC------TCTCTCGGAGAAGCACCGCTCGACTCTTCGCAGCC
TCTGACAAACGGCGCCGGCGACGGCGAGGATCTCCGGGAGAAGGACG---------------ATCCGCTGGGCCCCATTC
TGGGACCTGTGACTCTG---TTCTTCAAGCATTC---TTTTTCCTGTGACCCTCCGAGCGGGCTGCGGAGCATCCCTTGG
CTTGGCTGTGATCTCCAGGTAATTAATGGCCCTCGTCTCCGTTTCCGTTTGCTTTCGCCTTCTCTGCACTGCCTAGCTTG
CAAATCTGCAGCAAATCGCCACTGCGCCCGGCTTGGTTTTAGTTGCTTCAATAGATTCGATACTGTTTAGGTGTATGCTG
GGAAGGGAGTTGGTGTAGTTTAGTTTCATCCTCTGAACCACTGGTACTAGAGCCGTAGAGCGTGTTCTTGCTCCGTTGGA
GGTTCAGATTCAGCTGGGTTTCGATGTGCTCGAATTTTGAGCGGAACAGGTAGTACATGTTTGTAGATCATTTCTTCAGT
ATCTTTGGGGCAATTTTTTTTAAAATATATATAAT--TTTCAACTTTACTCTCGGATTGATAAAGTTTAAAATCTTGAAA
GAAATATGCAAAGTGGAAAACATTTTTTTTAAATCTGAGTTAAAATGGCGTTTCATCAGTGACGAGTCTTACATGAATAA
AGCTAAGCTGATAATGAATTGACCTGTTAAAACTTGGAAAAAGATGACATATGGAAGAAAAATGGACCTGTGGCTGTCAC
TTTCAGCTATGCTAGTAGAGCAGGAATTTGGACCTTTCCATACCAACTAATCACGTTATTTAAAGAGCATGATAAGCCTG
AACCGCTCTAGTTGTCTATTTGGTGGACAACATCATTTGCAGGTGGTGAAAGCATGAGGTTGTGGTCTCTCCTTCTTCTT
CTTGTTTGCTTGCCTACGCTGATCCTGTCGGAAGATTACTCCGACGTAACCGTCATCGTACGGGGCTCCAAGACGATCGC
TGCGACCAGTGATGAGTTTATTTGCGCTACCCTTGATTGGTGGCCTCCGGAGAAGTGCAACTATGATCAGTGCCCATGGG
GAAAGGCTTCTATCTTGAATATGGTAGGTCCTGAATCCCAGTAATACTCTCATTAATCAAATGAATTTGGATTTTACGCA
AATTACTAACTTTGGTCTTTCTCCGAATTTCCAGGACTTGACTAATCCGTTGCTAGCTAAAGCTATCCAGGGTTAGTGTT
CTGACCCTTGTCAATTGAAGAGTTTTCTACTTTTCAGTTACAACTCCCCTATTTTCTACTGTAATTTGTTCCCCCACCTT
TC------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------AATGAAAAGAAACGCAAAGTCTTTGCGTTTT
CTCGGAAAAAGAAAACAACTCCCTATGGAGGCTCAGTTTATTCTTAAATTTTTAGAAGGGTAAAATATCCTTGTGAGTCA
TTTACAACCTAGCATCTAACAATAATTGAGCTGCCACTCAAATATCCTTGTGAGTCTTCACTTAGCAAGTTTTTCCTTC-
TTTGTGTAGCTAGTTTCTTCACTTTTTTGTTTACCGTCTTTTCATAATGGTCTGGTTTATGGTCTTTATGACACCTCATC
TTCTTCCCCTGATGAATATTTCTGCCGAATTTATTCTTGTAGCTTTTAGCCCACTACGCATCAGAGTCGGAGGCTCCTTA
CAAGATCAAGTGGTATATGAAACACCAAATTTAGGATCTCCATGCAGACCATTTACAAAGGCTTCAAGTGGCTTGTTTGG
ATTTTCTAAAGGATGCATAACCATGGAAAGATGGGATGCAATGAATGATCTGTTCCTCAATACAGGGTGAATGCCTTTGC
CAGTTGCTTATCTTTAGGAATTTCCATCTATATTTTCTTCTAAGCGAGTTGTGATTGATTACATCAGACTTCTGAACGTG
CAACACATATTATGGGATAAAGTATTAGTGCATTAAAAATACACCCCTTCATCTTTCTTTTAAAATCTTAGCAGTGTATA
ATAATATATGCAGTGCATTTTCTAATTATTTTTTGTTTAATTCCTTCAGTGCAGTTATTACTTTTGGTCTTAATGCACTT
CGAGGGCGAAAGCAGATACGTAAAGGTGTTTGGGGAGGTGCTTGGAATTCAAGCAATGCCCAGGAGTTTATGGAATATAC
TGTTTCAATGAACTATCCTATTGATTCATGGGAATTTGGTAATACATTGTCAAACCCAAAACTATATTTGCTGCTCGCAA
AGCAAGGAACATCTTTCATGTGTGCAAAGCGCTATATAAGTAACTATGCTCATTCACTAGGTAATGAACTGAGTGGAAGT
GGAATCGGTGCAAGCGTGGGAGCTGAACAATACGGAAAAGACCTGGTTGCACTTCAAAAGATCGTCAATCAGTTATATGA
AAACTCTAGCAAACCATTGGTGCTAGCCCCAGGAGGATTCTATGACAAACAATGGTTTGCTATGCTCCTTGACGTCTCTG
GGCCAAATGTTGTCAGAGGAATGACTCACCATATTTACAATCTTGGTGCTGGTGAGTGTTTTTTCAGTTCTTGGTAGTAC
ACCTTGATTATTTCTATTTTTTCTCCTATATCAAAGATGGCACAAGATAATTTATTCAATCTTGATTAGGTAATGATCCA
CATGTGGCCAATAGAATCTTGGACCCGCAGCATTTAAGCAGGGTTTCAGACACATTCAGAGATCTCCAGCTCACGATACA
ACGACATGGACCATGGTCGGCTCCGTGGGTCGGGGAAGCTGGCGGAGCATATAACAGCGGCAGCCGTACCGTTTCCAATA
CTTTCCTGGATAGCTTCTGGTAATTACTTGTCAGAAGAACAAATGACTATCACGGCCATCATTCTTCTCGTGTCTTCTCA
TCCTGAAATTTGTTGTTTTAACTAGGTATCTTGATCAACTTGGTCAGTCAGCAAAGTATGACACCAAGGTCTACTGCAGA
CAGACTTTAATTGGAGGCAACTATGGCCTCCTCGACACCGATACTTACGTGCCGAACCCTGATTACTACAGGCAAGTATC
TGTACTGTATATTCCTGCCAGAAACATACTTTACCGTTTGCATATGCTTCAGATTACTAAACTTTGATAAATGTTCAGTG
CCTTGTTGTGGCATCGACTAATGGGGAATGGAGTTCTTTCCATAGACTTCGGTGGTACTTCATACTTGCGTGCCTATGCG
CATTGCGGGAAGCAGAAGGTAAGAGTGGCCCCATGAGATTGATTTAGGCTTGGTAAACATAGCAGAGTGCTGTGACTTTA
GTCACTGGTTGGCTGATTGGTGTGCTCTTAAAATGTTCTTTTCAGGGCGGTATCGCTCTCCTCTTGATCAACCTGAGCCA
AAACATGGGGTCCATGGTCACCGTCAGGAATGACCTCAATGTCGGCCTAGCGCAAGGGCAGGGGATAACAAGGGACAGCT
CCTTTGTTCATGGCCTGAAGAGGACGGTCTCCTGGGTCGGGAGCAAAGCCTCCGATGGGCTGGAGAAGAGGGAAGAGTAC
CACCTGACAGCTGAAGACGGGAACCGTTTTGCGCGCACCATGCTGCTGAATGGAGTTCCTCTGGAGCTCACTGAAGATGG
TGACATCCCTCCGATGTACCCGGTGCAAGTTTCTGCCAGTTCACCTATCTATGTCGCGCCGCTGTCCATCGCCTTCGTCG
TCTTCCCAGATTTTGAGGCTGATGCTTGCTAGCGATGAACTGTAGTTTTTAGATAGGATACCATGCGAGTTTTTCAGCTA
CAACAATATAGCGCTTCTCAACTATACAAATACTGAAAATGATTTGTGTTGATGTGTTCTGCCCCAATTGGGCCACCTAT
GTTCAACAAATTCACAATAAAGAAAAGCTCAAAAACTTTCTCCTGATATTTATCAAAACTTTCAGAAAGAGGTTGTCTCC
----------------------------------------------------------------------TACTTTATAA
GAAAATGAAGAACAAGAATCATACAGATTCAAATAATAATTTGGCTGTAAACAGAAATTATTATAAACTGCTGCTGTTCA
ACCCACCAACCAGCATGCATTGAAGTCAATGCTTCAACTGTAAACACTAA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CAATATGGCCAAATGACTGATGCTGTCACATGCAA
AATAACCTGAGA---------AATCTCAGATAGAAAAAACCCAAGACATGGAATGAAAAGCAAGTATTTCATTTGAGATG
ATCACCATAAATATATCAGAAAGACTGGGTGCAAAATGTACAGGGATGTTTTTTGCAAAATCAAAATTTGACCCTCTTCA
CATGGTGAACTGTATACTCACTCTCCAGCAATTACAGTAGTGATGGGACTATCATCAACTCTGCCAAATCAGGCAATTTA
TAATACTCCATCAAGTACAAAAGAACCATCCTAAACAATAGTGTAATTTCATGAGCTATGATACAAATGGAATAAACAAA
AGGAAAGGGATCCTCGTGTAAATGGGAACA
>chr5D_52
CAAAGG-----------------------------------------------------GAGATATAAAGAGGACC-GGC
AGCTACCTCCAGATTTTTCTTCCTTCAAGAATCTCTCTCCCTCTCTCTCTCGGAGAAGCGCCGCTCGACTCTTGGCAACC
GCTGACAAGCGGCGCCGGCGACGGCGAGGATCTCCGGGAGAAGGACGCCATATTTTCCTTTGATCCGCTGGGCCCCATTC
TGGGACCTGTTGCTCTG---TTCTTCAAGCATTC---TTTTTCCTGTGACTCTCCGAGCGGGCTCCGGAGCATCCCTTGG
CTTGGCTGTGATCTCCAGGTAATTAATGGCCCTCGTCTCCGTTTCCGTTTGCTTCCGCCTTCTCTGCACTGCCTAGCTTG
CAAATCTGCAGCAAATCGCCACTGCGCCCGGCTTGGTTTTAGTTGCTTCAATAGATTCGATACTGGTTAGGTGTATGTTG
GGAAGGGAGTTGGTGTTGCTTGGTTTCATCCTCTGAACCACTGGTACTAGAGCCGTAGAGCGTGTTCTTGCTCCGTTGGA
GGTTCAGATTCGGCTGGGTTTCGATGTGCTCAAATATTTAGCGGAACAGGTAGTACAGGTTTGTAGATCATTTCTTCAGT
ATCTTTGGGGCAATTTGTTAAAAAATA---ATAAT--TTTTAACTTTACTCTCCGATTGATAAAGTTTAAAATCTTGAAA
GAAATATGCAAAGTGGAAAACATTTTTTTTAAATGTGAGTTAAAATGGCGTTTCATCAGTGACGAATCTTACATGAATAA
AGCCAAGCTGATAATGAATTGACCTGTTAAAACCTGG-AAAAGATGACATATGGAAGAAAAATGGACCTGTGGCTGTCAC
TTTCAGCTATGCCAACAGAGCAGGAATTTGGACCTTTCCATACCAACTAATCACGTTATTTAAAGAGCATGATAAGCCTG
AACCGCTCTAGTTGTCTATTTGGTGGACAACATCATTTGCAGGTGGTGGAAGCATGAGGTTGTGGTCTCTCCTTCTTCTC
CTTGTTTGCTTGCCTACACTGATCCTGTCGGAAGATTACTCCGACGTAACCGTCATCGTACGGGGCTCCAAGACGATCGC
TGCGACCAGTGATGAGTTCATTTGCGCTACCCTTGATTGGTGGCCTCCGGAGAAGTGCAACTATGATCAGTGCCCATGGG
GAAAGGCTTCTATCTTGAATATGGTAGGTCCTGAATCCCAATAATACTCTTATTAATCACATGAATTTGGATTTTACGCA
AATTACTAAGTTTGGCCTTTCTCCGAATTTCCAGGACTTGACTAATCCGTTGCTAGCTAAAGTTATCCAGGGTTAGTGTT
CTGACCGTTGTCAATTGAAGAATTTTCTACTTTTCAGTTACAACTCCCCTATTTTCTACTGTAACTTGTTCCCCCACCTT
TCAATGAATGGGTTTTTATCATTTATGCCACTGGTTGTCACTCACTACTCAGTTTTGCCACTAGGAATTTCAACTGCTCA
AAAATGCCATCGCTTCGTTAGGTGCATGCTCAAAAATGCCACTCGACACCATGATTGTCAGCTCAAATCTCGTTTGCCAT
GTCATAATGACCAAAATAACTATAGAGCAACATGTCAGCTCTCCCTCTATCTCACTACAATAAAGTGTGGGTCCAACTTG
ATCCCAACAACGTTCTTATTTTCTCTTAAATTATTCGCTTGCTTACTCCAAACAAGTGGGTATAGGGTTATTTTTGTCAT
TACATGGTCAATGAGTTTGACCTGACAATAACGATGTCTGATGGCATTTCTGAGAAAATATCTAATGGAACAATGGCATT
TTTTAGATATCTAATGGCATTTTTGAGAAAACATCTCACGGAGCGATGGCATTTTTGAGCAGTTGTAATTTCTAATGACA
AAACTGAGTAGTGAGACACAACTAGTGGCATAAATGATAAAAACCCATGAATGAAAAGAAACGCAAAGTCTTTGCGTTTT
CTCCGAAAAAGAAAACAACTCCCTATGGAGGCTCAGTTTATTCTTAAATTTTTAGAAGGGTAAAATATCCTTGTGAGTCA
TTTACAACCTAGCATCTAACAATAATTGAGCTGCCACTGAAATATCCTTGTGAGTCTTCACTTCGCAAGTTTTTCCTTTT
TTTGTGTAGCTAGTTTCTTCACTTTTTTGTTTACCGTCTTTTCATAACGGTCTAGTTTATGGTCTTGATGGCACCTCATC
TTCTTCCCCTGATGAATATTTCTGCCGAATTTATTCTTGTAGCTTTTAGCCCACTACGCATCAGAGTCGGAGGCTCCTTA
CAAGATCAAGTGGTATATGAAACACCAAATTTAGGATCTCCATGCAGACCATTTACAAAGGCTTCAAGTGGCTTGTTCGG
ATTTTCTAAAGGATGCATAACCATGGAAAGATGGGATGCAATGAATGATCTGTTCCTCAATACAGGGTGAATGCCTTTGC
CAGTTGCTTATCTTTAGGAATTTCCATCTATATTTTCTTCTAAGCGAGTTGTGATTGATTACATCAGACTTCTGAACATG
CAACATATATTATGGGATAAAGTATTAGTGCACTAAAAATAC-CCCCATCATCTTTCTTTTAAAATTTTAGCAGCGTATA
ATAATATATGCAGTGCATTTTCTAATTATTTTTTGTTTAATTCCTTCAGTGCAGTTATTACTTTTGGTCTTAATGCACTT
CGAGGGCGAAAGCAGATACGCAAAGGTGTTTGGGGAGGTGCTTGGAATTCAAGCAATGCTCAGGAGTTTATGGAATATAC
TGTTTCAATGAACTATCCTATTGATTCATGGGAATTTGGTAATACATTGTCAAATCCAAAACTATATTTGCTGCTCGCAA
AGCAAGGAACGTCTTTCATGTGTGCAAAGCGCTATATAAGTAACTATGCAG-TTTACTAGGTAATGAACTGAGTGGAAGT
GGAATCGGTGCAAGCGTGGGAGCTGAACAATGCGGAAAAGACCTGGTTGAACTTCAAAAGATCGTCGATCAGTTATATGA
AAACTCTAGCAAACCATTGGTGCTAGCCCCAGGAGGATTCTATGACAAACAATGGTTTGCTAAGCTCCTTGACGTCTCTG
GGCCAAATGTTGTCAGAGGAATGACTCACCATATTTACAATCTTGGTGCTGGTGAGTGTTTTTTCAGTTCTTGGTAGTAC
ACCTTAATTATTTCTATTTTTTCTCCTATATCAAAGATGGCACAAGATAATTTATTCAATCTTGATTAGGTAATGATCCA
CATGTGGCCAATAGAATCTTGGACCCGCAGCATTTAAGCAGGGTTTCAGACACATTCAGAGATCTCCAGCTCACGATACA
ACGACATGGACCATGGTCGGCTCCGTGGGTCGGGGAAGCTGGCGGAGCGTATAACAGCGGCAGCCGTACCGTTTCCAATA
CTTTCCTGGATAGCTTCTGGTAATTACTTTTCAGAAGAACA---GACTATCACGGCCATCATTCTTCTCGTGTCTTCTCA
TCCTGAAATTTGTTGTTTTAACTAGGTATCTTGATCAACTTGGTCAGTCAGCAAAGTATGACACCAAGGTCTACTGCAGA
CAGACTTTAATTGGAGGCAACTATGGCCTCCTCGACACCGATACTTACGTGCCGAACCCTGATTACTACAGGCAAGTACC
TGTACTGTATATTCCTGCCAGAAACATACTTTACCGTCCGCATATGCTTCAGATTACTAAACTTTGATAAATGTTCAGTG
CCTTGTTGTGGCATCGACTAATGGGGAATGGAGTTCTTTCCATAGACTTCGGCGGTACTTCATACTTGCGTGCCTATGCG
CATTGCGGAAAGCAGAAGGTAAGAGTGGCCCCATGAGATTGATTTAGGCTTGGTAAACATAGCAGAGTGCTGTGACTTTA
GTCACTGGTTGGCTGATTGGTGTGCTCTTAAAATGTTCTTTTCAGGGCGGTATCGCTCTCCTCTTGATCAACCTGAGCCA
AAACATGGGGTCCATGGTCACCGTCAGGAACGACCTCAACGTCGGCCTAGCGCAAGGGCAGGGAATAACAAGGGACAGCT
CCTTTGTTCATGGCCTGAAGAGGACGGTCTCCTGGGTTGGGAGCAAAGCCTCCGATGGGCTGGAGAAGAGGGAAGAATAC
CACCTGACGGCTCAAGACGGGAACCGTTTTGCACGCACCATGCTGCTGAATGGAGTTCCTCTGGAGCTCACTGAAGATGG
TGACATCCCTCCGATGTACCCGGTGCAAGTTTCTGCCAGTTCACCGATCTATGTCGCGCCGCTGTCCATTGCCTTCGTCG
TCTTCCCAGATTTTGAGGCTGACGCTTGCTAGCGATGAACTGTAGTTTTTAGATAGGATACCATGCGAGTTTTTCAGCTA
CAACAATATAGCGCTTCTCAACTATACAAATACTGAAAATGGTTTGTGTTGATGTGTTCTGCCCCAATTGGGCCACCTAA
GTCCAACAAATTCACAATAAAGAAAAGCTCGAAAACTTTCTCCTGATATTTATCAGAACTTTCAGAAAGAGATTGTCTCC
----------------------------------------------------------------------TACTTTATAA
GAAATTGAAGAACAAGAATCATGCAGATTCAAATAATAATTTGGCTGTAAACAGAAATGATCATAAACTGCTGCTGATCA
ACCCACCAACCAGCATGCATTGAAGTCAATGCTTCAACTGTAAACACTAA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CAATATGGCCAAATGACTGGTGCTGTCACATGCAA
GTGCATGCAAAATAACCTCAGAATCTCAGATAGAAAAAACCCAAGACATGGAATGAAATGCAAGTATTTCATTTGAGATG
ATCACCATAAATATATTAGAAAGACTGGGTGCAAAATGTACAGGGATGTTTTTTGCAAAATCAAAATTTGACCCTCTTCA
CATGGTGAACTGTATACTCACTCTCCAGCAATTACAGTACTGATGGGACTATCATCAACTCTGCCAAATTAGGCAATTTA
TAATACTCCATCAAGTACAAAAGAACCATCCTAAACAATAGTGTAATTTCATGAGCTATGATACAAATGGAATAAACAAA
AGGAAAGGGATCCTCGTGTAAATGGGAACA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S---
----------S--------S-----------------------------------S-----------------S------
--------------------------------------S------S----------------------------------
---SSS-S-S---SSSSSSS------S------SSSS-------------------------------------------
---------------------------------------------------------------------S----------
-----------------------------------------S--------------------------------------
----S------------------------S--------S----S------------------------------------
-S---------------S-------------------------S------------------------------------
--------------------------S--------SS------------S-----------S-----S------------
----S----------------------S-S-----------------------------S--------S-----------
-------------------------------------------S---------------------S--------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
------------------------S-------------------S-----------------------------------
------------------------S-------------------------------------------------------
-----------------------------------------S----------------------------------S---
--------------------------------------------------------------------------------
------S-------------------------S---------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
----------------S------------------------------------S------------------S-------
-----------------------------------------------------S--------S-----------------
----------S-----------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------S----------------SS-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S-S----------------------S-----------------------S-----
------------------------------------------S--------------S-----------------S----
--------------------------------------------------------------------------------
------------S--SS------S---S-----------------------------------------------S----
-------------------------------------------------S------------------------------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S----
----------------------------------------------------------S---------------------
----------------S----------SS------S---S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S--------S---S-S----S------
------------------------S------------S------------------------------------------
----------------------S---------------------S--------S----------------------S---
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
------------------------------
>forward_42
----------------------CCAGTTCCCCCAAAGCCTAT--------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------
>reverse_1145
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TGCTACCCTTGATTGGTGGC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------
>forward_100
-------------------------------------------------------------------------------A
CCAGACCTCCGGATTTTTCC------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------
>reverse_1393
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------ATCAGTTACAGCTCCCCTATTTTCT-----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------
>forward_154
--------------------------------------------------------------------------------
-------------------------------------------------------GAGCACCGCTCGACTCTTT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------
>reverse_2143
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------AAGCAAGTTTTTCCTTTT
TGTGTAGC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>forward_1065
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TTGCTTGCCTACGCTGATCG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>reverse_2777
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------CGCTCAGGAGTTTATGGGGT----
--------------------------------------------------------------------------------
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------------------------------
>forward_1974
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------GTTCCCCCACCTTTCAATGG--------------------------
--------------------------------------------------------------------------------
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------------------------------
>reverse_3502
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------CTCTTCTCGTGTCTTCTCA
TCCT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>forward_2795
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------ACGCTCAGGAGTTTATGGGG-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>reverse_4804
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---TCGGACTCTAGGCCTTCCAA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------
