>input_sequence_27736
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----------------------ATGCCGATCGAGGCGGCAGACAACGTACCGGCCGAGCTTCCCGGCCACGGCCGGACGG
TGTGCGTCACCGGCGCCGGCGGTTTCATCGCCTCGTGGCTCGTCAAGCGCCTCCTCCAGAAGGGTTACACCGTGCGAGGC
ACCGTTCGCAACCCAGGTACGTGTGGCATCGCATACTAGATCAGTACGTGAGTTCATCATGCAAGACACTCGTCTTATTA
CCTGCTAACACGATC-------GTTCGCATGACTTGTGGCAGTTGATCCGAAGAATGATCACCTCAGAGCCTTCGATGGC
GCCGCCGACCGCCTCATCCTCCTCCGCGCCGACCTTATGGAGCCCGAAACCCTCGTCGAGGCGTTCACGGGCTGCGAGGG
CATCTTCCACGCCGCTTCCCCCGTCACCGACGACCCTGTACGTACCATTGATGCCACACGATCGATTGCTAACCTGCATG
GAAACTAAACTCCCGATCGATGGCTACCTGCAGGAGAAGATGATCGAGCCGGCGATCCGAGGGACCAAGTACGTGATCAC
GGCAGCCGCGGACATGGGCATCAAGCGTGTGGTGTTCACGTCCACCATCGGCACGGTGTACATGAACCCCCACAGGGACG
CCAGCAAGCCCGTCGACGACACCTGCTGGAGCGACCTTGAATACTGCAAAAAGACAGCGGTACGTAGTAATAATTGTTTT
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TTTTGTTCATGCATGG-GACACAATAATCAATTTCTACTATCCTTTCAAACTCAG
AAACCGGCCGG---------------------------------------------------------------------
----------------------------------GGAATATATGCATGCTTACTGCCAATGATTTGCTAGAACGTACGCT
TAATTAATT-TTTGATGGTACGCAAATGTCGAGCTTCACCAAACGTGGATGCAAAGCTGGAATACTTATAGAAAAGGCGA
CGTTGATTTCTTACCTACTGAGGCGTATGAGGTGTTGTTCCTTGGCCAGTGCGTCAAGCACTGCACCAGCTGCAAGACCA
TTCTAGCTTGCGGCCATTTTTAACCACTCCAAACACCTTTTGCTAGCTCTACCTACTGCCGCACATATACTCGGTTGGGA
TCCTATCCTT----TGCGCTCCTTTTGTTGTTGAGACCAAAATCGGCTAGAATAAAATATATGTAGCTAGCTCGGCAGTT
GGGGACACGGTC----ATCCACTTTTTGAGTGGAAGTTCATCATTTCTTTGAAGAAAGATAAGAAGAAGAATCATCTTCT
TTTTT-CAATATTTAAATCATAGCATGCATGATGATATCCATGTCACGCGCGTGCAGAACTGGTACTGCTACGCGAAGAC
GGTGGCCGAGCAGGACGCGCTGGAGACGGCCCGGCAGCGCGGCATCGAGCTGATCGTGGTGAACCCGGTGCTGGTGCTGG
GCCCGCTGCTGCAACCTACGGTGAACGCGAGCACGGAGCACGTGATGAAGTACCTGACGGGGTCGGCCAAGACGTACGTG
AACGCGGCGCAGGCGTACGTGCACGTCAAGGACGTGGCCGAGGCGCACGTCCGCGTCTACGAGGCGCCCGGCGCGCACGG
CCGCTACATCTGCGCCGAGGGCACCACGCTCCACCGCGGCGACCTCTGCCGCGTCCTCGGCAAGCTATTCCCTGAGTACC
CCGTACCCACCAAGTACGTCCGTCGCATGCAGACTGGAAGAATCACCTCACC---GCTGGTTCTACCCAGTATATTTTTG
GTTGGTTATTCGACGATTAACATGTTCGTTTGGTGTGTGTATAGGTGCAAGGACGAGGTGAACCCACCGGTGAAAGGGTA
CAAATTCACCAACCAGAGGCTCAAGGATCTGGGCATGGAGTTCGTGCCGGTGCTGCAGAGTATATACGAGACGGTGAAGA
GCCTCCAGGAGAAAGGGATGCTGCCGGTGCTACCGCCAGGCGACGACATCCCAGACAACCTGCATGAGCAGCTCATGATG
AAGCCCGCCCAGTTGCTACGTAATTAATTATACTCTACATTTGATACAG--ATATGCTGTCGGCTAGTTAATTCTATGGG
ACATGTCTGTCCATTCGATCGGTCTTATATATGCGTACACCGGTACACGTATGCACTTTTAATTGGTGCATGCATGCGTG
CGTGAGTGGGTGGGTTGGTTGGCGATCACATACATG----GATCAGTGCTGTATGACGCACAGACACACACACAATGTTA
TATGCATA----GTGATATAAATCCACGGACTACAATAACCAGGCAATGTGCAACTTTGGATTATATAGATTAGCAAACA
TACCCGTGCATTGCAACTGGCAAAAAACACAATGCATTCAAATGTGGTCTATCTCAAAGGTGATGATCTCAGCCATCACA
CGTACATCCACAACTGAACCATGCGTCGCAAGTGAATGTCCAACAGTTTTAAAAGTAATCTCATCGAGCTGGAATGATTA
CTGCCCTTCCCAAGCTACGGCCTACACCTAGTCCATCAC--TCACTCATACCCGCACTCACTTTTAAGTTGTATATTTGT
TTGTCAAAATGCATCAACATTGTTTTAAAACACATAAACACTTTCTAAATCACATGGACTATTTATTTTAAAGAGCATGA
ATACTTTTAAAATTACAAACATTTTTAGCGC-GTGAACACATAGAATTGCATGAAATGTTTTTAAGAAAAGGGTGAACTA
TTTAAAATTATATGAACATTATTTTAATATGTGAATACTTCTCTTAAAACAACACATA----------------------
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---------------------------------------------TAGTCTAAAATGCGCATACGGTTTAGAAAAATACG
TAATATTTTTCAAAAGGCACCAACACGTTTTGAATAACACGAAAAATTATATTTC-------------------------
-----------AGGAAAACACGTTCTAATAGGATTGGGAGTGTAG-----------------------------------
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>chr5B_1_TraesCS5B01G160700
TGCTTTGAACTCGCTTTTCCCCTTCCCCTTTCCCATTTCATGTATCTCTTGCTGGTTTTGGACAAGTTGTATTTCTATTA
TGCTTTATAATGAAAAGAGGTTTATCCTTGGTTCAGAAAATATATACATATATGACC-----------------------
------------------GCCATTGAACTGGGCTAAAATGTGAAATCAGAGAGC----TACAATGTGAATATCTTTTAAT
TCCAATTATTATCTTGTGAAAAATACGGAGTATGGCATCGTTCAT----ATGCATGATGGGCTTGATCGATGACGAGAAA
TACCCTGACGTTACCTAGG-------GCGGCCATTCTTGACAGTTGAAACCGAATACTGACCCTCGATCGATGATCCCCA
TATAAAGCACATGTACGTACAATACGTACATATGACAACCCACAGACGAGTACA------CCGTAGCGAATACTTTTCTT
CGGCTCTCACACGCGCCTCACGAATCATGATTTCTATAGTTGGTAGCTGACCACCAACCCCCAAATGAACGAAGCTGCTG
GCCTAAGTTCGTAGGTACGACCCGGCAAACGGCTGGTTATGAGCATGACAGAGAGCTTAATCTCCGTTAAACAAATGAGC
TCTCGCACGCATGTAGTACTACTGTGAATCATGTGCAACGCTTAAATCGAGGTGCCAAGTCTGGCCGTAGCAAATAAAGA
AAGTTTCCCACCAACTCTGGCGCCAAAGCGAGCGACGACCGTCCTGTCGATGCGGGCCACACGGTTTTCCAACCGTCTTG
AACCACTCCAGCTCTCTCTTTCGCTGCCTCTATAAGTACAGCCAGGATGCGCAGTACCCTATCTCATCTCATATCCAGCA
GCTGCCTAGCTCTACTTACTACCTGCGCAGTGTTGTGTGGTACTGTAGTAAGTAGCAGGGAAGAACCGTTCCGAGTACAC
AGCGTACTTTTGGACCTGTGGATACCTTGCTAGGCACCTGCTGCTCGCAACATCCCCGGATACGTCGTGTCAATCCGGAA
GTAAGCCGAGAGGAAGAGAGAGATGCCGATCGAGGCGGCAGACAACGTACCGGCCGAGCTTCCCGGCCACGGCCGGACGG
TGTGCGTCACCGGCGCCGGCGGTTTCATCGCCTCGTGGCTCGTCAAGCGCCTCCTCCAGAAGGGTTACACCGTGCGAGGC
ACCGTTCGCAACCCAGGTACGTGTGGCATCGCATACTAGATCAGTACGTGAGTTCATCATGCAAGACACTCGTCTTATTA
CCTGCTAACACGATC-------GTTCGCATGACTTGTGGCAGTTGATCCGAAGAATGATCACCTCAGAGCCTTCGATGGC
GCCGCCGACCGCCTCATCCTCCTCCGCGCCGACCTTATGGAGCCCGAAACCCTCGTCGAGGCGTTCACGGGCTGCGAGGG
CATCTTCCACGCCGCTTCCCCCGTCACCGACGACCCTGTACGTACCATTGATGCCACACGATCGATTGCTAACCTGCATG
GAAACTAAACTCCCGATCGATGGCTACCTGCAGGAGAAGATGATCGAGCCGGCGATCCGAGGGACCAAGTACGTGATCAC
GGCAGCCGCGGACATGGGCATCAAGCGTGTGGTGTTCACGTCCACCATCGGCACGGTGTACATGAACCCCCACAGGGACG
CCAGCAAGCCCGTCGACGACACCTGCTGGAGCGACCTTGAATACTGCAAAAAGACAGCGGTACGTAGTAATAATTGTTTT
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TTTTGTTCATGCATGG-GACACAATAATCAATTTCTACTATCCTTTCAAACTCAG
AAACCGGCCGG---------------------------------------------------------------------
----------------------------------GGAATATATGCATGCTTACTGCCAATGATTTGCTAGAACGTACGCT
TAATTAATT-TTTGATGGTACGCAAATGTCGAGCTTCACCAAACGTGGATGCAAAGCTGGAATACTTATAGAAAAGGCGA
CGTTGATTTCTTACCTACTGAGGCGTATGAGGTGTTGTTCCTTGGCCAGTGCGTCAAGCACTGCACCAGCTGCAAGACCA
TTCTAGCTTGCGGCCATTTTTAACCACTCCAAACACCTTTTGCTAGCTCTACCTACTGCCGCACATATACTCGGTTGGGA
TCCTATCCTT----TGCGCTCCTTTTGTTGTTGAGACCAAAATCGGCTAGAATAAAATATATGTAGCTAGCTCGGCAGTT
GGGGACACGGTC----ATCCACTTTTTGAGTGGAAGTTCATCATTTCTTTGAAGAAAGATAAGAAGAAGAATCATCTTCT
TTTTT-CAATATTTAAATCATAGCATGCATGATGATATCCATGTCACGCGCGTGCAGAACTGGTACTGCTACGCGAAGAC
GGTGGCCGAGCAGGACGCGCTGGAGACGGCCCGGCAGCGCGGCATCGAGCTGATCGTGGTGAACCCGGTGCTGGTGCTGG
GCCCGCTGCTGCAACCTACGGTGAACGCGAGCACGGAGCACGTGATGAAGTACCTGACGGGGTCGGCCAAGACGTACGTG
AACGCGGCGCAGGCGTACGTGCACGTCAAGGACGTGGCCGAGGCGCACGTCCGCGTCTACGAGGCGCCCGGCGCGCACGG
CCGCTACATCTGCGCCGAGGGCACCACGCTCCACCGCGGCGACCTCTGCCGCGTCCTCGGCAAGCTATTCCCTGAGTACC
CCGTACCCACCAAGTACGTCCGTCGCATGCAGACTGGAAGAATCACCTCACC---GCTGGTTCTACCCAGTATATTTTTG
GTTGGTTATTCGACGATTAACATGTTCGTTTGGTGTGTGTATAGGTGCAAGGACGAGGTGAACCCACCGGTGAAAGGGTA
CAAATTCACCAACCAGAGGCTCAAGGATCTGGGCATGGAGTTCGTGCCGGTGCTGCAGAGTATATACGAGACGGTGAAGA
GCCTCCAGGAGAAAGGGATGCTGCCGGTGCTACCGCCAGGCGACGACATCCCAGACAACCTGCATGAGCAGCTCATGATG
AAGCCCGCCCAGTTGCTACGTAATTAATTATACTCTACATTTGATACAG--ATATGCTGTCGGCTAGTTAATTCTATGGG
ACATGTCTGTCCATTCGATCGGTCTTATATATGCGTACACCGGTACACGTATGCACTTTTAATTGGTGCATGCATGCGTG
CGTGAGTGGGTGGGTTGGTTGGCGATCACATACATG----GATCAGTGCTGTATGACGCACAGACACACACACAATGTTA
TATGCATA----GTGATATAAATCCACGGACTACAATAACCAGGCAATGTGCAACTTTGGATTATATAGATTAGCAAACA
TACCCGTGCATTGCAACTGGCAAAAAACACAATGCATTCAAATGTGGTCTATCTCAAAGGTGATGATCTCAGCCATCACA
CGTACATCCACAACTGAACCATGCGTCGCAAGTGAATGTCCAACAGTTTTAAAAGTAATCTCATCGAGCTGGAATGATTA
CTGCCCTTCCCAAGCTACGGCCTACACCTAGTCCATCAC--TCACTCATACCCGCACTCACTTTTAAGTTGTATATTTGT
TTGTCAAAATGCATCAACATTGTTTTAAAACACATAAACACTTTCTAAATCACATGGACTATTTATTTTAAAGAGCATGA
ATACTTTTAAAATTACAAACATTTTTAGCGC-GTGAACACATAGAATTGCATGAAATGTTTTTAAGAAAAGGGTGAACTA
TTTAAAATTATATGAACATTATTTTAATATGTGAATACTTCTCTTAAAACAACACATA----------------------
--------------------------------------------------------------------------------
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---------------------------------------------TAGTCTAAAATGCGCATACGGTTTAGAAAAATACG
TAATATTTTTCAAAAGGCACCAACACGTTTTGAATAACACGAAAAATTATATTTC-------------------------
-----------AGGAAAACACGTTCTAATAGGATTGGGAGTGTAGCAACTGATCAGGTGCTAAAAAATATTATTCCTAAG
TTATTTTCTAGCCATGCATTCCTTCTTTTCAATGGGCACAGCGGAGTTTATCATTTGTTTA-------------------
-----TTTTTTAGTTCCTTTCCTTCCTGAGGCATTTATTCCTTCTTTTAATTC---------------------------
-------------------------------TATC-TTTTTAATACCTTTCCCTCCCAAGGTATGTATTCCTTCTTTTCA
TTGGCACAACGGAGTTTATCCTTCTTTTAATTTCATTTTCTTCCAGAAGCATTTATTCCTTCTTCCAATTTCTTTTCCTC
CCTAAGGCACACCGGAGTGTCCTTCTTTTAGTTTA-----TTTGATTCTTGAGGCGGCTTATTAATTTGAAATCATAAAT
GTATATAAATTGATGGGATGAGGTGTAAGAAAGCGATATGGAACTATTTAATAGTTGAATGACAAACGAAAAAAACTATG
TGGTAATAGGCAAGCCCATAAGTGTGACGTTGTGGAAGTGGAA-GACAGTCTGCTCGCGATTACC----TGCCGCACAGG
GGTCAAGCGAGCAAACGTGTTATGGGCCGACCAATTTGTACAACTCAAACATACTGGACCGGTTTTTGAAACCTTTCAGA
GTCTCCTGGCCGGTTTTTGA-AACTTTTCAGAGTTTCCTGGCCGGTTTTGGGAATCTTCTAGAAGGTTCTAGAACCTGTT
TTTTTATGTTTTCTTCTACTAGGTTTTCCGGTTTTTTCATTTTCTGTTTCTTTTCTATTTGTATGCTTTTTGAAAATTTT
GTAAAATTCAAAAAATGTTTCTGTTTTCATATTTTGTTCACTAACTAAAAAAATGTTTGCACTTATAAAAAAATGTTCAT
GCTTTTCTATCTTCAAAACTTCAAAAAAAAGTTCCA-TTTTTGATTTTTTGTTAACAAATTCAATTAATGT---------
---AACATGTTTCAGATTTAAAAAAATGTTCTTCTTTTCCAAAAATTGTTCAAAATTTCAGAAACAATTCTCGTTTTTAA
AATTTGTTCACATATTCAAAAAATTATTCATG
>chr5D_1
TGCTTTGAACTCGCTTTTCCCCG------TTCCTAGTTCATGTATCTCTTGCTGGTTTTGGACAAGTTGTATTTCTATTA
TGCTTTATAATGAAAAGGGGTTTGTCCCTGGTTCAGAAAATATATACTGTGAAAACACTCTTATATTATGGAACGAAGGG
AGTACTACATATACGATTGCCATTGAACTGGGCTAAAATGTGAAATCAGGGAGCTACGTACAATGTGAATATCTTCTAAT
TCCAATTATTATCTTGTGGAAAATACGGACTATGGCATCGTCCAT----ATGCATGATGGGTTTGATCGATGACGAGAAA
TACCCTGACGTTACCTAGGTCCTAGGGCGGCCATTCTTGACAGTTGAAACCGAATACTGACCCTCG----ATGATCCCCA
CATAAAGCACATGTACGTATAATACGTACATATGACAACACACAGACGAGTACATGCACACCGTAGCGAATACTTTTCTT
CGGCTCTCACACGCGCCTCACGAATCACGATTTCTATAGCTGGTAGCTGACCACCAACCCCCAAATGAACGAAGCTGCTG
GCCTAAGTTCGTAGGTACGACCCGGCAAACGGCTGGTTATGAACATGACACGGAGCTTAATCTCCGGTAAACAAATGAGT
TCTGGCACGCATGTAGTACTACTGTGAATCATGTGCAACGCTTAAATCGAGGTGCCAAGTCTGGCCGTAGCAAATAAAGA
AAGTTTCCCACCAACCCTGGCGCCAAAGCGAGCGACGACCGTCCTGTCGATGCGGGCCACACGGTTTTCCAACCGTCTTG
AACCACTCCAGCTCTCTCTTTCGCTGCCTCTATAAGTACAGCCACGATGCGTAGTGCCCTATCTCATCTCATATCCAGCA
GCTGCCTAGCTCTACTTACTACCTGCGCAGTGTTGTGTGGTACTGTTGTAAGTAGCAGGGAAGAACAGTTCCGAGTACAC
AGCGTAC--TTGTGCCTGTCGATACCTGCTAGCAGCATC---------------------TACATCGTGCCAATCGGAAA
GTAAGTCGA--------GAGAGATGCCGATCGAGTCGACAGACAACGTACCGGCCGACCTTCCCGGCCACGGCCGGACGG
TGTGCGTCACCGGCGCCGGCGGCTTCATCGCCTCGTGGCTCGTCAAGCGCCTCCTCCAGAAGGGGTACACCGTGCGGGGC
ACCGTTCGCAACCCTGGTACGTGTGGCATCTCATACTCGATCAGTACGTGAGTTCATCATGCAAGACACTCGTCTTATTG
CCTGCTAACACGATCGTTCGCTGTTCGCATGACTTCTGGCAGTTGATCCGAAGAATGACCACCTGAGAGCCTTCGACGGC
GCCGCCGACCGCCTCGTCCTCCTCCGCGCCGACCTTATGGAGCCCGAAACCCTCGTGGAGGCGTTCACGGGCTGCGAGGG
CATCTTCCACGCCGCTTCCCCCGTCACCGACGACCCTGTACGTACCATTGATGCCACACGATCAATTGCTAACCTGCATG
GAAACTAAACTCCCGATCGATGGCTACCTGCAGGAGAAGATGATCGAGCCGGCGATCCGGGGGACCAAGTACGTGATCAC
GGCGGCCGCGGACATGGGCATCAAGCGTGTGGTGTTCACGTCCACCATCGGCACGGTGTACATGAACCCCCACAGGGACC
CCAGCAAGCCCGTCGACGACACCTGCTGGAGCGACCTTGAATACTGCAAAAAGACAGCGGTACGTAGTACTAATAATTTT
TTTTTGGTGTGTCTAGGTCTCAGTCGACTGAGACTTAACCAAGTCTTGAGTGATATAGTATATGAGAAGAAAAAGAAAAA
ACTGAAAAGAAATTTTTATACGAATCTTAATGCAAGATCAATGAAATATAACATCGACTGAGACATAACGAAATCTAAGT
CGACTGAGACGTAGCAAAACTGTTTTTTTTTTCATATACAGAGCCAATGG------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TTACTGCCAATGATTTGCTAGCACGTACGCT
TAATTAATTTTTTTATGGTACGCAAATGTCGAGCTTCACCAAACGTGGATGCAAAGGTGGAATTCGTATAGAAAGGGTGA
CGTTGATTTCTTACCTACTGAGGCCAATGAGGTATTGTCCCTTGGCCAGTGCGTCAAGCACTGCACCAGCTGCAACACCA
TTCTAGCTTGCGGCCATTTTTAACCACTCCAAACGCCTTTTGCTAGCTCTACCTACTGCCGCACATATACTCGGCTGGGA
TCCTATCCTTTGCATGCGCTCCTTTTGTTGTTGAGACCAAAATCGGCTAGAATAAAATATATGTAGCTAGCTCGGCAGTT
GGGGACACGGTC----ATCCACTTTTTGAGTGGAAGTTCATCATTTCTTTGAAGAAAGATAAGAAGAATCATCGTCTTCT
TTTTT-CAATATTTAAATCATAGCATGCATGATGATATCCATGTGGCGCGCGTGCAGAACTGGTACTGCTACGCGAAGAC
GGTGGCCGAGCAGGACGCGCTGGAGACGGCCCGGCAGCGCGGCATCGAGCTGATCGTGGTGAACCCGGTGCTGGTGCTGG
GCCCGCTGCTGCAGCCGACGGTGAACGCGAGCACGGAGCACGTGATGAAGTACCTGACGGGGTCGGCCAAGACGTACGTG
AACGCGGCGCAGGCGTACGTGCACGTCAAGGACGTGGCCGAGGCGCACGTCCGCGTCTACGAGGCGCCCGGCGCGCACGG
CCGCTACATCTGCGCCGAGGGTACCACGCTCCACCGCGGCGAGCTCTGCCGCGTCCTCGGCAAGCTCTTCCCCGAGTACC
CCGTACCCACCAGGTATGTCCGTCGCATGCAGACTGGAAAAATATATCACCGCTAGCTGGTTCTACCGTAG-TATTTTTG
GTTGATTTGGTCACTAAC-ACATGTGCGTTTGGTGTGC----AGGTGCAAGGACGAGGTGAACCCACCGGTGAAAGGGTA
CAAATTCACGAACCAGAGGCTCAAGGACCTGGGGATGGAGTTCGTGCCGGTGCTGCAGAGCATATACGAGACGGTGAAGA
GCCTCCAGGAGAAAGGGATGCTGCCGGTGCTACCGCCAGGCGACGACGTCCGAGACAACCTGCATGAGCAGCTCATGATG
AAGCCCGCCCAGTTGCTACGTAATTAATTATACTCTACATTTGGTAGGG--ATATGCTGTCGGCTAGTTAATTCTATGGG
ACATGTCTGTCCATTCGATCGGTCTTATATATGCGTACAC--------GTACGCACTTTTAATTGGTGCGTGCGTGCGTG
CGTGAGTGGGTGGGTTTGTTGGCGATCATATATAAGGATCGATCAGTGCTGTATGACGCACATATG--CACACAATGTTA
TATCCATATATAGTGATGTAAATCCACGAACTACAATAACCAGGCAATGTGCAACTTT----------------------
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>chr5A_72
-----------------------------------------------------------------------TTTTTACTA
TTCTTTATAATGAAAAGAGGTTTGTCCCTGGTTCAGAAAATATATACATATATGACC-----------------------
------------------GTCATTGAAGTGGGCTAAAATGTGAAATCAGGGAGC----TACAATGTGAATATCTTCTAAT
TCCAAGTATTATCTTGTGGAAAATACGGAGTATGGCGTCGTCCATGCATATGCATGATGGGCTTGATCGATGACGAGAAA
TACCATGACGTTA-------CCTAGGGCGGCCATTCTTGACAGTTGAAACCGAATACTGACCCTCG----ATGATCCCCA
CATAAAGCACATGTACGA--AATACGTACATATGACAACATACAGACGACGAGT---ACGCCGTAGAGAATACTTTTCTT
CGGCTCTCACACGCGCCTCACGAATCACGATTCCTATAGTCGGTAGCTGACCACCAACCCCCAAATGAACGAAGCTGCTG
GCCTAAGTTCGTAGGTACGACCCGGCAAACGGCTGGTTATGAGCATGACACGGAGCTTAATCTCCGTTAAACAAATGAGC
TCTGGCACGCATGTAGTACTACTGTGAATCATGCGCAACGCTTAAATCGAGGTGCCAAGTCTGGCCGTGGCAAATAAAGA
AAGTTTCCCACCAACTCCGGCGCCAAAGCGAGCGACGACCGTCCTGTCGATGCGGGCCACACGGTTTTCCAACCGTCTCG
AACCACTCCAGCTCTCTCTTTCGCTGCCTCTATAAGTATAGCCACGATGCGTAGTGCCCTATCTCATCTCATATCCAGCA
GCTGCCTAGCTCTACTTACTACCTGCGCAGTGTTGTGCGGTACTGTAGTAAGTAGCAGGGAAGAACCGTTCCGAGTACAC
AGCGTACTTTGGGACCTGTCGATACCTTGCTAGGCACCAGCTGCTCGCAACATCCCCGGATACGTCGTGCCAATCCGGAA
GTAAGTCGAGAGGAAGAGAGAGATGCCGATCGAGGCGGCAGACAACGTGCCGGCCGAGCTTCCCGGCCACGGCCGGACGG
TGTGCGTCACCGGCGCCGGCGGCTTCATCGCCTCGTGGCTCGTCAAGCGCCTCCTACAGAAGGGCTACAACGTGCGGGGC
ACCGTTCGCAACCCTGGTACGTGTGATATAGTAGCACACTC--------GAGTTCATCTTGCAAGACACTCGTCTTATTA
TCTGCTAACACGATC-------GTTCGCGTGACTTCTGGCAGTTGATCCGAAGAATGACCACCTGAGAGCCTTCGACGGC
GCCGCCGACCGCCTCGTCCTCCTCCGCGCCGACCTTATGGAGCCCGAAACCCTCGTCGAGGCGTTCACGGGCTGTGAGGG
CATCTTCCACGCCGCTTCCCCGGTCACCGACGACCCTGTACGTACCATTGATGCCACACGATGAATTGCTAACCTGCTTG
GAAACTAAACTTCTGACCGATGGCTAC---CAGGAGAAGATGATCGAGCCGGCGATCCGGGGGACCAAGTATGTGATCAC
TGCAGCCGCGGACATGGGCATCAAGCGTGTAGTGTTCACGTCCACCATCGGCACGGTGTACATGAACCCCAACAGGGACC
CCAGCAAGCCCGTCGACGACACCTGCTGGAGCGACCTTGAATACTGCAAAAAGACAGCGGTACGTGGTAATTG----TTT
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TTTTGTTCACATACAGTGACACAATAATCCATTGCTACTTATCTTTGAAACTCGG
AAACCCGGTAATATATGTTTACTGTGAATACTCCCTCCGTTTCAAATTACTTGTCGTGGTTTTAATTCAAATTTGAACTA
AAACCACGACAAGTAATTTGGAAAGGAGGGAGTAGTACTATACGTATGATTACTGTCAA---------------------
------------TGATGGTACACAAATGTCGAGGTTCACCAAACGTGGATGCAAAGCTGGAATACGTATAGAAAGGGCGA
CGTTGATTTCTTACCTACCGAGGCCAATGAGGTATTGTTCCTTGGCCAGTGCGTCAAGCACTGCACCAGCTGCAAGACCA
TTCTAGCTTGCGGCCATTTTTAGCCACTCCAAACACCTTTTGCTAGCTCTACCTACTGCCGCACATATACTCGGCTGGGA
TCCTATCCTT----TGCGCTCCTTTTGTTGTTGAGACCAAAATCGGCTAGAATAAAATATATGTAGCTAGCTCGGCAGTT
GGGGACACGGTCGGTCATCCACTTTTTGAGTGGAAGTTCATCATTTCTTTGAAGAAAGATAAGAAGAATCATCATCTTCT
TTTTTGCAATATTTAAATCATAGCATGCATGATGATATCCATGTCACGCGCGTGCAGAACTGGTACTGCTACGCGAAGAC
GGTGGCCGAGCAGGACGCGCTGGAGACGGCCCGGCAGCGCGGCATCGAGCTGATCGTGGTGAACCCGGTGCTGGTGCTGG
GCCCGCTGCTGCAGCCGACGGTGAACGCGAGCACGGAGCACGTGATGAAGTACCTGACGGGGTCGGCCAAGACGTACGTG
AACGCGGCGCAGGCGTACGTGCACGTCAAGGATGTCGCCGAGGCGCACGTCCGCGTCTACGAGGCGCCCGGCGCGCACGG
CCGCTACATCTGCGCCGAGGGCACCACGCTCCACCGCGGCGAGCTCTGCCGCGTCCTCTGCAAGCTCTTCCCCGAGTACC
CCGTACCCACCAAGTATGTCCGTCGCATGCAGACTGGAAAAATATATCACCGCTAGCTGGTTCTACCGAGG-TATTTTCG
GTTGATTTGATCATTAAC-ACATGCGCGTTTGGTGTGT----AGGTGCAAGGACGAGGTGAACCCACCGGTGAAAGGGTA
CAAATTCACGAACCAGAGGCTCAAGGACCTGGGGATGGAGTTCGTGCCGGTGCTGCAGAGCATATACGAGACGGTGAAGA
GCCTCCAGGAGAAAGGGATGCTGCCGGTGCTACCGCCAGGCGACGACGTCCGAGACAACCTGCATGAGCAGCTCATGATG
AAGCCCGCCCAGTTGCTACGTAATTAATTATACTCTACATTTGGTAGGGATATATGCTGTCGGCTAGTTAATTCTATGGG
ACATGCCTGTCCATTCGATCGGTCATATATATGCCTACAC--------GTATGCACTTTTAATTGGCGCATGCATGCGTG
CGTGAGTGGGTGGGTTGGTTGGCGATCATATGTAAGGATCGATCAGTGCTGTATGACGCACATATG--CACACAATGTTA
TATCCATATATAGTGATATAAATCCACGGACTACAATAACCAGGCAATGTGCAATTTTAGATTATATAGACTAGCAAATA
TATCCGTGCATTGCAGT-GGGAAAAAACACAATGCGTTCAAATGTGATCTAACTCAAAGGTGATGATCTCAGCCATCACA
CCTACACCCACAATTGAACCATGC-TCGCAAGTGAATGTCCAATAGTTTTAAAAGCAATCTCGTTGAGCTGGGATGACTA
CCGCCCTTCCCAAGCTACGGCCTACACCTAGTCCATCACCATCACTCATACCCGCACTCACTTTTAAGTTGTATATTTGT
TTGTCAAAATGCATCAACATTGTTTTAAAACACATAAACACTTTCTAAATCACATGGACTATTTGTTTTAAAGAGCATGA
ATATTTTTAAAATTACAAACATTTTTTAGCATGTGAAC----AGAATTGCATGAAATGTTTTTAAGAAAAGGGTGAATTA
TTTAAAACTATATGAACATTATTTTAATATGTGAATACTTCTCTTAAAACTACACATA----------------------
--------------------------------------------------------------------------------
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---------------------------------------------TAGTCTAAAATGCACATACGATATC-AAAAATACT
TAATATTTTTCAAAAGGCACCAACACGTTTTGAATAACACGAAAAATTATATTTC-------------------------
-----------AGGAAAACACGTACTAATAGGATTGGGAGTGTAGCAACTGATCAGGTGCTAACAAATATTATTCTTAAG
TTA-------GCCATGCATTCCTTCTTTTTAATGGGCACACCGGAGTTTATCATTTTTGCCGCAAAAAAAACGGAGTTTA
TCATTTTTTTTAGTTCATTTCCTTCCTGAGACATTTATTCCTTCTTTTAATTGGCACAGAAGAGTTTATCCTTCTTTTAA
TTTCCCCTTTTAACCGGTGAAGTGTGAACTTTATTTTTTTTAATACCTTTCCCTCCCAAGGTATTTATTCCTTATTTTCA
TTGGCACAATGAAGTTTATCCTTCTTTTAATTTCTTTTTCTTCTAGAGGCATTTATTCCTTCTTCCAATTTCTTTTCCTC
CCTAAGGCACACCGGAG---------------------------------------------TAATTTGAAATCATAAAT
GTATATAAATTGATGGGGTGAGGTGTAAGAAAGCGATATGGAACTATTTAATAGTTGAACGACAAACCAAAAAAACTATG
TGGTAATAGGCAAGCCCATAAGTGTGGCGCTGTGGAAGTGGAAAGACAGTCTGCTCGCGTCTACCTATTTGCCGCACAGG
GGTCAAGCAAGCGAACGTGTTATGGGCCGACCAATTTGTACAACTCAAACATA---------------------------
GTATACCGGACCGGTTTCTG-AACCTTTCAGAGTTTCCTGGTCGGTTTTGGGAATCTTCTAGAAGGTTCTAGAACCGG--
TTTTTATGTTTTCTTCTACTAGGTTTTCTGGTTTTTTCATCTTATGTTTCTTTTCTATTTGTATGCTTTTTTAAAATTTT
GTAAAATTCAAAAAATGTTTCTGTTTTCATATTTTGTTCACTAACTAGAAAAATGTTTGCACTTATCGAAAAATGTTCAT
GATTTTCTATGTTCAAAATTTCAACAAAAATTGTTCCTTTCTGATTTTTTGTTAATAAATTCAATTAATGTTCGCATTTT
TTAAACATGTTTCAGGTTTTAAAAAATGTTCTTCTTTTCCAAAAATTGTTCAGAATTTCAGAAACAATTCTCGTTTTTAC
AATTTGTTCACAAATTCAAAAAA---------
>chr5D_3184
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-------------------------------------------GCAATGTGCAA-TTTAGATTATATAGACTAGCAAACA
TGCCCGTGCATTGCAAC-GGAAAAAAACACAATGC---------TGGTCTATCTCAAAGGTGATGATCTCAGCCATCACA
CGTACACCACCAATTGAACCATGCGTCGCAAGTGAATGTCCAATAGTTTTAAAAGTGATCTGGTCGAGCTAGGATGACTA
CCGCCCTTCCCAAGCTACGGCCTACACCTACTCCATCACTATCACTCATACCCGCACTCACTTTTAAGTTGTATATTTGT
TTGTCAAAATGCATCAACATTGTTTTAAAACACATAAACACTTTCTAAATCACATTGACTATTTATTTTAAAGGGCATGA
ATATTTTTAAAATTACAAACATTTT--AGCATGTGAACACATAGAATTGCATGAAATGTTTTTAAGAAAAGGGTGAATTA
TTTAAAATTATATGAAGATTATTTTAATATGTGAATACTTGTCTTAAAACAACACATATCTATACCTACTATTAAAGGGA
GGTGATGTTCTAGGTTTTGTCCTGCTTAGTTTGGTCCCAATTCAATTAATTTCACGTACGCTGTTTGGTTTCGTTACTTG
CCAACCGTTTTGGCCCAGCAGAGAAAGCCCACCTGGCGGTGCACTAAGGCACAAGTCCGGAGAGCTGGCAAAAAAATAAA
ATTGCTGATGTGAGGGTTCGATCTCATAACCTGCGAACCGGCCACACACAGTTTGTCCAACTGACCCAGCTAGAGATATG
GGAGGATTTCTTTCTCCCGTTGCAATGCACGGTCCTTTTTGCTAGTAGTCTAAAATGCACATACCGTTTAGAAAAATACC
TAATATTTTTCAAAAGGCACCAACACGTTTTGAATAACATGAGAAATTATATTTTAGGAAAACACGTACTACTTTCCCTC
AAAAACAAAAAAGGAAAACACGTACTAATAGGATTGGGAGTGTAGCAACTGATCAGGTGCTAAAAAATATTATTCCTAAG
TTATTTTCTAGCCATGCATTCCTTCTTTTTAATGGGCACAGCGGAGTTTACCATTTGTTTAA------------------
-----TTTTTTAGTTCCTTTCCTTCCCGAGGCATTTATTCTTTCTTTTAATTGGCACAGAAGAGTTTATCCTTCTTTTAA
TTTCCCTTTTGCCCCGGTGAAGTGTGGACTTTATT-TTTTTAGTACCTTTCCCTCCCAAGGTATTTATTCCTTCTTTTCA
TTGGCACAACGGAGTTTATCCTTCTTTTAATTTTTTTTTCTTCCAGAGGCATTTATTCCTTCTTCCAATTTCTTTTCCTC
CCTAAGGCACACCGGAGTGTCCTTCTTTTAGTTTATTTGATTTGACTCTTGAGGCGGCTTATTAATTTGAAATCATAAAT
GTATATAAATTGATGGGATGAGGTGTAAGAAAGCGATATGGAACTATTTAATAGTTGAACGACAAACGAAAAAAAA---G
TGGTAATAGGCAAGCCCATAAGTGTGGCGCTGTGGAAGTGGAA-GACAGTCTGCTCGG--------------CGCACATG
GGTCAAGCGAGCGAACGTGTTATGGCCCGACCAATTTGTACAACTCAAACATA---------------------------
GTATACTGGACCAGTTTTTGAAACCTTTCAGAGTTTCCTGGCCGGTTTTTGGAATCTT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>SNPs
----------------------SSSSSSS----S-S--------------------------------------------
-----------------------S---S----------------------------------------------------
-------------------------------------------------S-------------------------S----
------------------S----------------------S--------------------------------------
------------------------------------------------------------------SSSS----------
S------------------S-------------------S----------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------SS----------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S------S---S------------------------
--------------------------------------------------------------------------------
-------------------S------------------S------------------------------S----------
-----S--------------------------------------------------------------------------
----------------------S-----------------------------------------S-----------S---
--------------S-----------------------------------------------------------------
-----------------------------------S----------------------S-----S-----------S---
---------------S----------------------------------------------------------------
---------------------------------------------------------------S----------------
-----------------------------------------------------------S--------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------SS----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------SS-SS--------------S---S-----SSS----S------S-
-----S-SSSS---------------------------------------------------------------------
-----------------------------------S-S----S-S---S---------------------S---------
-----------------------------------------------------------------S--------S-----
------------------------SS-------S----------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------SS----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S--S---------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-----------------------S-----S-------
----------------S----------------------S---SSSSSSS-S---------------S--SS--------
----S--SSSSS--S-SSS------S------------SSSS--------------------------------------
---------S-----------------S-----S--------------------------S-------------------
-----------------------------------------------S---S----------------------------
-------------------------------------------S--SS--------------------------------
----------------------------------------SSSSSSSS--------------------------------
----------------------------S---S-S---------------------------S-SSSS------------
---S------------------------------------------------------S-----------S---------
-----------------S--S--------------S--------------------------------------------
------S------S-----------------------------S------------------S---------S----S--
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------SSSSS----------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S--------------------S
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
-----------------------------S--------------------------------------------------
----------------------------------------------------S---------------------------
----------------------------------S-----------------------------S---------------
----------------------------------S------------S--------------------------------
---------------------------------------------S----------------------------------
-----------------------------------------------------------S--------------------
--------------------------S--S-----------------------------SS-------------------
------------S----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
--S-S----S-S-S----SS----S---------------------------------------------------S-SS
----------------------------S-----------S--S---------------------------S--------
-----------------------------------------------S------------------SS------------
-S--------S-------S-----S-----S-SSSS----S--------------S------------------------
---------------S---S--------------------------------S--------------------------S
------------S----------SSSSSSSSS
>forward_852
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--------------------------------TAAGTACAGCCAGGATGCGC----------------------------
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>reverse_3081
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----------------------------------------ATAGGTGCAAGGACGAGGTG--------------------
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>forward_2395
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-------------------------------------------------------CTGCCGCACATATACTCGGT-----
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>reverse_3687
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------TCCACAACTGAACCATGCGT------------------------------------------------------
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>forward_3506
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----------------------------------------------TGCTGTATGACGCACAGACA--------------
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>reverse_5193
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------------------------------------------------------------------------CTTTCAGA
GTCTCCTGGCCG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
