>input_sequence_27658
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--------------------ATGCTCCGCCTGCTCCCGCTCACCCTCTCCACCCAGTGCCGGAGCGGCGGCCCGCCGCCG
CACCGCTGCTTCGTCGACGGCGGCTCGCCGTCCCAGAGAGCCGGGCCAGGGCTCCTCGCGAACAACGGAGTTCGCGTTAG
AGTCCGGAGGCGAGCGCTCCGCGGGGCAGACGTCCAGCCGGACACCCCGCCATCGCGCAGGGACGGGGATAAGCCGCTGC
ACGCGGATGCCGAACAGGTGGAGGGCAGCGGCGTGGAGCTGCTGGACTCGGTAAGGAAGCTGCTGCTGAAGGACGCCGAG
CCGGGGGAGGAGGAGCAGGGGCAGTTCCCCAAGCGCTGGGCCATTGTCTTCCTCTGCTTCTCCGCCTTCCTCCTCTGCAA
CATGGACCGCGTACGTGCGCACCCCTAGCTGGGCTGCTTCCCCCACCTCCTCACTCCTCACCACCGACATCCATAGCTAC
TGAACCTCCAGCAATGGTTGCTATTAATTTGCAGGTAAACATGAGCATTGCCATCATGCCCATGTCCGCGGAGTACGGCT
GGAACCCGCAAACCGTCGGCCTCATCCAGTCGTCCTTCTTTTGGGGCTACCTCCTAACTCAGGTCTGTGGTTCAGACCGG
GGAGCAACCATTGATTGGTTCATACTGAACATGCACACACTTTGTATCTAAGATTCATGGAAGATCCGCAATTTACTCCT
CCCCTTGAGTG----TAGTATCTAACACCATTGTCATTGCAGATAGCAGGAGGGATATGGGCAGACAAAGTTGGGGGGAA
GACTGTTCTTGGTTTCGGGGTGATTTGGTGGTCGGTCGCCACAGCTCTTACGCCTGTGGCGGCAAAGCTAGGCTTGCCAT
TTCTCCTTGTTGTGCGTGCTTTTATGGGAATTGGAGAGGTAAGCCTTGATAATCATCCTTACTGTACAAAGCTACGTCAC
TGTACCACTGTGACTTTGAGTCATAGAATACGGTTCCTAATTTCATGGTGAAGTTGAACATTTGGTGCATTCTGTGTCTT
CCAGTTTGCCTTTGGTAATTTGCACTACTTAACCATTTGGTGTGGTGTTTG-----------------------------
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---------------------------------------------------------------------------CATTT
CTCTGATTTAGTTGTCGTCCTGTCTGAATTTGCTGTGAAGTTATTGTGATAAAATAAGGGGTACCAGAGCTTAGGTTCAA
ATATTGCTTTAAACATAGAGAATAAGCCAACTGAGGGAAGGGCCAAATTATATAATAGGAGAAGAAAGGCAAACAAAGTT
GTAGTTGATGTTCTTCATACACCGGTGCATCATGGACATGACAAAATATAAATTCTTGCAACAGGGGGTTGCCATGCCCG
CAATGAATAATATACTTTCAAAATGGGTTCCTGTATCAGAGAGGAGCAGATCATTAGCTCTTGTATATAGTGGGATGTAC
CTAGGGTCAGTGACAGGACTCGCATTTTCGCCATTTCTGATACACAAGTTTGGGTGGCCATCAGTCTTCTATTCCTTCGG
CTCTCTTGGGACTGTCTGGTTCGCGACATGGGCGGCCAAGGTACTTCGGTGTTGTGAATTACTGTGCAACTTCTCTGATT
TTGTTTTCATCATGTCTGAATTTGTTGTCTGTTATCTTAAAAGGCTTATAGTACTCCACTTGAGGATCCGGGGATTAGTG
CTGAAGAAAAGAAGCTTATCATTAGTCAAACCACATCAGGAGAGCCTGTTACAACAATTCCATGGGGAGTAATATTGTCA
AAACCGCCTGTTTGGGCACTTATAGCTTGCCACTTTTGCCATAACTGGGGAACTTTTATCTTGCTCACATGGATGCCTAC
GTACTACAACCAGGTACCATCAACATCGTTGTTACCTAATTGAGCATCATGAACTGCAAACCCCTTTCTTTATAATGACA
AACTTAATATAAAATAGGTTTTGAAATTCAACCTCACGGAGTCCAGCCTTTTCTGCGTCCTTCCCTGGCTAACAATGGCG
ATTTCTGCAAATGTTGGTGGTTGGATTGCAGACACACTTGTTAGTAGAGGAACATCAGTGACAACGGTTCGCAAGGTAAA
TTAAACACTTTGATATTCTGAGTTTATATTCCCCAGTGATGTATTCACTGGGGCTAAGATAACCAGGATCCAGTTTTTGA
ACTTGTACTAAAGAAAGATGTCATCAATATTGTTACCCTATGCACGTCCACCTGTTGCAGATCATGCAATCAATTGGTTT
CTTAGGGCCAGCCTTTTTTCTCAGTCAACTGAGCCATATCGATTCACCAGCACTGGCAGTTTTGTGCATGGCTTGTAGCC
AGGTGAGGCTCCCTTTTACTTCTGGTCGTTGATAATATTTTCTTCGTATAGTGCAACTCTGTTTTATATCTGAATCTTTT
TCCAAATATCAGGGAAGTGATGCATTTTCTCAGTCTGGTCTATACTCAAATCATCAAGATATCGGTCCTCGATACGCCGT
AATCATCTGACTATAGCATAATATTTCAATGCACTATAATCTTAGATGTTCTGTAAAGTCGTACTGAATAT--GCTACCA
AAAGGTGATGAACTTCCTGTCTTGCAGGGTGTACTACTTGGTCTCTCCAACACAGCTGGGGTTCTAGCTGGTGTATTTGG
CACAGCAGCAACCGGATACATCTTGCAGCATGGTCTGCCCTGATCCTAACCTCTTTATGTTACGTAACATATTACACTGT
CAATTTGCACGTCTCATCCTTCAAACAAAAATGCAGGTTCTTGGGACGATGTCTTCAAATTGTCTGTAACTCTTTATCTT
GTTGGAACTGTGATATGGAATTTATTTTCAACCGGCGAGAAAATTATCGATTGA--------------------------
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>chr3A_1_TraesCS3A01G190800
ATACCGATCCACGGATGACACTTAAGCACAGAGACTTGATCCATTCGGGTCGGGTCGCTACACAACCAAGGAGCTAGTGC
TTGAGTTGTGCACTTAAAATAAATTTTATGTAAACGCTATCTATATTCCATACCAATATTTGTTATTTACATGCGACATT
GTCTTTTATGATCGACGTGCATGAATTTGCATGGATTTGAGAGTCCGAACTTAAGATATGTGAATGTCGAGAGGAAAATA
TGAGGGCCCGTCAGGATGCGCCCGCGGGCGTGCCCGGGCGCATCCGCGGACTAATAGGGGGTCTGATTTGGCAGATCCGG
CTATAGATGCTTTTAGATGCTCAGAAGGAAAAGGTAGAAGAATAGGGCCCATTTTGGGTTCTGGCCCACATGCCAGCCGC
AGCCCGATCAACAGATGGCCTTAACGCTCTTTTTTTTGATAAACTT--CTTTTTTATTTATTCATAAGTAAAGTAGCATT
GTTTATAAAT--------------ATCATGGACGCTATCCATCCAAATACTTGGAGGAGAAAACCAACCTAGCTAACTTT
GCTAGTTCATGAACTATTCGATTACGCTTTTTAGTTAAGCTAGGC-----------------------------------
------ATAAACTTGAAGAAGATATTGTGTTGAA-TTTTTTT--ACTCCCTCACAACGCACGGGCACCTACATAGTCCCT
TTAAAAAGTGTCCCTGGGAAGAAATGCAACGCAGATGAGATGATACATGCATGGCATGCCACGTTAGCGTCCAGATGGCG
AGCTGCGGTGCGCAGATAGCCTATAGCCAGACACAATCGTCCCGTCGGGGTGGTCGACCAACGAGAGCCATTCGTCTGCC
CCAGCCGCGCACGATGGCCACTTCGACGCTTCCCTCGCACCCATCGTCGACTCCAGCTCGCCAGAGGAGGCCGGGGAGTC
AAAAATCTAGCTAGCTAGCTAGCTAGCATCTGCGCCGAGCTGATCGAGCACGCAAGCGAGAAGCCACGTCCGTGCACAGG
GTAAGGGGAGGACAGGCGCCATGCTCCGCCTGCTCCCGCTCACCCTCTCCACCCAGTGCCGGAGCGGCGGCCCGCCGCCG
CACCGCTGCTTCGTCGACGGCGGCTCGCCGTCCCAGAGAGCCGGGCCAGGGCTCCTCGCGAACAACGGAGTTCGCGTTAG
AGTCCGGAGGCGAGCGCTCCGCGGGGCAGACGTCCAGCCGGACACCCCGCCATCGCGCAGGGACGGGGATAAGCCGCTGC
ACGCGGATGCCGAACAGGTGGAGGGCAGCGGCGTGGAGCTGCTGGACTCGGTAAGGAAGCTGCTGCTGAAGGACGCCGAG
CCGGGGGAGGAGGAGCAGGGGCAGTTCCCCAAGCGCTGGGCCATTGTCTTCCTCTGCTTCTCCGCCTTCCTCCTCTGCAA
CATGGACCGCGTACGTGCGCACCCCTAGCTGGGCTGCTTCCCCCACCTCCTCACTCCTCACCACCGACATCCATAGCTAC
TGAACCTCCAGCAATGGTTGCTATTAATTTGCAGGTAAACATGAGCATTGCCATCATGCCCATGTCCGCGGAGTACGGCT
GGAACCCGCAAACCGTCGGCCTCATCCAGTCGTCCTTCTTTTGGGGCTACCTCCTAACTCAGGTCTGTGGTTCAGACCGG
GGAGCAACCATTGATTGGTTCATACTGAACATGCACACACTTTGTATCTAAGATTCATGGAAGATCCGCAATTTACTCCT
CCCCTTGAGTG----TAGTATCTAACACCATTGTCATTGCAGATAGCAGGAGGGATATGGGCAGACAAAGTTGGGGGGAA
GACTGTTCTTGGTTTCGGGGTGATTTGGTGGTCGGTCGCCACAGCTCTTACGCCTGTGGCGGCAAAGCTAGGCTTGCCAT
TTCTCCTTGTTGTGCGTGCTTTTATGGGAATTGGAGAGGTAAGCCTTGATAATCATCCTTACTGTACAAAGCTACGTCAC
TGTACCACTGTGACTTTGAGTCATAGAATACGGTTCCTAATTTCATGGTGAAGTTGAACATTTGGTGCATTCTGTGTCTT
CCAGTTTGCCTTTGGTAATTTGCACTACTTAACCATTTGGTGTGGTGTTTG-----------------------------
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---------------------------------------------------------------------------CATTT
CTCTGATTTAGTTGTCGTCCTGTCTGAATTTGCTGTGAAGTTATTGTGATAAAATAAGGGGTACCAGAGCTTAGGTTCAA
ATATTGCTTTAAACATAGAGAATAAGCCAACTGAGGGAAGGGCCAAATTATATAATAGGAGAAGAAAGGCAAACAAAGTT
GTAGTTGATGTTCTTCATACACCGGTGCATCATGGACATGACAAAATATAAATTCTTGCAACAGGGGGTTGCCATGCCCG
CAATGAATAATATACTTTCAAAATGGGTTCCTGTATCAGAGAGGAGCAGATCATTAGCTCTTGTATATAGTGGGATGTAC
CTAGGGTCAGTGACAGGACTCGCATTTTCGCCATTTCTGATACACAAGTTTGGGTGGCCATCAGTCTTCTATTCCTTCGG
CTCTCTTGGGACTGTCTGGTTCGCGACATGGGCGGCCAAGGTACTTCGGTGTTGTGAATTACTGTGCAACTTCTCTGATT
TTGTTTTCATCATGTCTGAATTTGTTGTCTGTTATCTTAAAAGGCTTATAGTACTCCACTTGAGGATCCGGGGATTAGTG
CTGAAGAAAAGAAGCTTATCATTAGTCAAACCACATCAGGAGAGCCTGTTACAACAATTCCATGGGGAGTAATATTGTCA
AAACCGCCTGTTTGGGCACTTATAGCTTGCCACTTTTGCCATAACTGGGGAACTTTTATCTTGCTCACATGGATGCCTAC
GTACTACAACCAGGTACCATCAACATCGTTGTTACCTAATTGAGCATCATGAACTGCAAACCCCTTTCTTTATAATGACA
AACTTAATATAAAATAGGTTTTGAAATTCAACCTCACGGAGTCCAGCCTTTTCTGCGTCCTTCCCTGGCTAACAATGGCG
ATTTCTGCAAATGTTGGTGGTTGGATTGCAGACACACTTGTTAGTAGAGGAACATCAGTGACAACGGTTCGCAAGGTAAA
TTAAACACTTTGATATTCTGAGTTTATATTCCCCAGTGATGTATTCACTGGGGCTAAGATAACCAGGATCCAGTTTTTGA
ACTTGTACTAAAGAAAGATGTCATCAATATTGTTACCCTATGCACGTCCACCTGTTGCAGATCATGCAATCAATTGGTTT
CTTAGGGCCAGCCTTTTTTCTCAGTCAACTGAGCCATATCGATTCACCAGCACTGGCAGTTTTGTGCATGGCTTGTAGCC
AGGTGAGGCTCCCTTTTACTTCTGGTCGTTGATAATATTTTCTTCGTATAGTGCAACTCTGTTTTATATCTGAATCTTTT
TCCAAATATCAGGGAAGTGATGCATTTTCTCAGTCTGGTCTATACTCAAATCATCAAGATATCGGTCCTCGATACGCCGT
AATCATCTGACTATAGCATAATATTTCAATGCACTATAATCTTAGATGTTCTGTAAAGTCGTACTGAATAT--GCTACCA
AAAGGTGATGAACTTCCTGTCTTGCAGGGTGTACTACTTGGTCTCTCCAACACAGCTGGGGTTCTAGCTGGTGTATTTGG
CACAGCAGCAACCGGATACATCTTGCAGCATGGTCTGCCCTGATCCTAACCTCTTTATGTTACGTAACATATTACACTGT
CAATTTGCACGTCTCATCCTTCAAACAAAAATGCAGGTTCTTGGGACGATGTCTTCAAATTGTCTGTAACTCTTTATCTT
GTTGGAACTGTGATATGGAATTTATTTTCAACCGGCGAGAAAATTATCGATTGATATGTATAGCCCGCTTCTGGTTAACG
ACTCATC---CCTGCTAGTAGTAGATACTGCCCTGGGTGGACACAATTCATTCTGCATGCACTGCTCCAACTCCTGGGAA
GAAAGAAAGAAGCAAAGAACAGACTGCCAGATCTAATATGTACCAGCAAGCAACAGCTGCACATAATTCAGGATCTTAAT
TTTGAAACGGAGCATGAATTGAGCACAGGAACGCCAAGCGGCCGGTTGTATAGGGATGTGTAGTGTGCAAGTGATTATAG
GTACCATGTACATATCCTGTCATACACGCATAGTGTTTTTGACCTGTAAGCCTCTTTTCTTTTTCTTTTTGGAATAG---
----CTCACTTCTGTGACATATCATCGTAGTCTAGTTTTGTTTCCTGATTATTTCAGGATCATAAACATGGATGCACTGA
ACATTTGATGAGTATTTAACACTCACTTTGATCTATACAACTTTTGTAGCATGTATGTTTAAATGAGGAAGTGCAACTCT
GTTTCATCCTGTGAACGCTCAGATGTTCAGGTTCTTTGTGGTGGAACCAGCCCATCGTAATTCAAGTCCTAGACTTGGCA
CTGATGCTCGCATTCAAGCTTCACAACAATGTTCGTTTAGTGGGAGGAGATGTTCTCGTTTAGTGGGAGGAGATGTTCTC
GTTGACTACGAAACG-----------------------------------------------------------------
----------------------------------------------------------------------CATGTGGTGG
CTTCGTCAAATCTAAAGATGTTGTGACTGCTCCGTATCAGGGTGGTGCTTATAGGCGTAGGGTGTACATGCGTACATTCA
TAGGGGTGACAGAACTGGTGGCTAGGGTTAGGCTCGTTCTGGTCCTCTCACGCTTTGTCCCCGTGAGCGACCCGGGGCAA
CCCTTGCTCGTCGCCTCTCTCCCCTTTCCTCCCAACGCTCC-TCCCCCACCGCCATCACGAGGCGCTGACAGGCAAAGCC
CGATCGACGCAGGTGGCGGTGGGGCCTCTTTCCTCTCCGCTCGATCCAAGGGATGGCTTGGGATGATTCCGCGGGTGGAG
>chr3D_62
-------------------------------------------------------------ACAACCAAGGAGCTAATGC
TTGAGTTGTGCACTTAAAATAAATTTTATGTAAACGTTATCTATGCTCAATACCAATATTTGTTATTTACGTGCAACATT
GTCTTCTATGATCGACGTG----------CATGGATTTGAGAGTCCGAACTTGAGATATGTGAATGTCGGGAGGAAAATA
TGAGGGCCCGTTAGGATGTGCCCGGGGGCG------------TCCGCGGATAAATAGGGGTTCAAATTTGTCAGGTCCGG
CTGTAGATGCTCTTAGATGCTCAGGAGGAAAAGGTAGAAGAATAGGGCCCATTTTGAGCTCTGGCCCACACGCCAGCCGC
AGCCCAATCAACAGATGGCCTCAACGCTCTTTTTTTGGTAAACTTTTCCTTCTTTATTTATTCATAAATAAAGTAGCATT
GTTTACAAGTAAAAGGATAACCTAATCATGGGCGTTATCCATCCAAACACTCGGAGGAGAAAACCAACCTAGCTAACCTT
GCTAGTTCATGAACTACTCGATTACGCTTTTCATTTAAGCTTGGCATAAACAAGAAGATATTGTATAAACTTGAAGAAGA
TATTGTATAAACTTGAAGAAGATATTGTGTTGAA-TTTTTTTTGACTCCCTGACAACGCACGGG----------------
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>chr3B_540
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---------------------------------------------------------------------------ACCTT
GCTAGTTCATGAATTACTCGATTACGCTTTTCATTTAAGCTAGGCATAAAC-------------------TTGAAGAAGA
TATTGTATAAACTTGAAGGAGATATTGTGTTGATTTTTCTTTTGACTTCGTGACAACGCACGGGCACCTACATAGTCCCT
CTAAAAAGTGTCCCTGTGAAGAAATGCAACGCAGATGAGGTGATACATGCATGGCATGCCACGTTAGAGTCCAGATGGCG
AGCTGCGGTGCGCAGATAGCCTATAGCCAGACACAATCGTCCCGTCGAGGTGGTCGACCAACGAGAGCCATTCGTCTTCC
CCAGGTGCGCACGATGGCCACTTCGACGCTTCCCTCGCACCCATCGTCGACTCCAGCTCGCCAGAGGAGGCCGGGGAGTC
AAAAAT--------CTAGCTAGCTAGCATCTGCGCCGAGCCGATCGAGCACGCAAGCGAGAAGCCACGTCCGTGCACAGG
GTAAGGCGAGGACAGGCGCCATGCTCCGCCTGCTCCCGCTCTCCCTCTCCGCCCAGTGCCGGAGCGGCGGCCCGCCGTCG
CACCGCTGCTTCGTCGACGGCGGCTCGCCGTCCCAGAGAACCGGGCCAGGGCTCCTCGCGAACAACGGAGTTCGCGTTAG
AGTCCGGAGGCGAGCGCTCCGTGGGGCAGACGTCCAGCCGGACACCCCGCCATCGCGCAGGGACGGGGATAAGCCGCTGC
ACGCGGATGCCGAACAGGTGGAGGGCAGCGGCGTGGATCTGCTGGACTCGGTAAGGAAGCTGCTGCTGGAGGACGCCGAG
CCGGGGGAGGAGGAGCAGGGGCAGTTCCCCAAGCGCTGGGCCATTGTCTTCCTCTGCTTCTCCGCCTTCCTCCTCTGCAA
CATGGACCGCGTACGTGCGCACCCCTAGCTGGGCTGCTTCCCCCACCTCCTCACTCCTCACCACCGACATCCATAGCTAC
TGAACCTCCAGCAATGGTTGCTATTAATTTGCAGGTAAACATGAGCATTGCCATCATGCCCATGTCCGCGGAGTACGGCT
GGAACCCGCAAACCGTCGGCCTCATCCAGTCGTCCTTCTTTTGGGGCTACCTCCTAACTCAGGTCTGTGGTTCAGGCCGG
GGAGCAACCATTGATTGGTTCATACTG----TGCACACATTTTGTATCTAAGATTCATGGAAGATCCGCAATTTACTCCT
CCCCTTGAGTG----TAGTATCTAACACCATTGTCATTGCAGATAGCAGGAGGGATATGGGCAGACAAAGTTGGGGGGAA
GACTGTTCTTGGTTTCGGGGTGATTTGGTGGTCGGTCGCCACAGCTCTTACGCCTGTGGCGGCAAAGCTAGGCTTGCCAT
TTCTCCTTGTTGTGCGTGCTTTTATGGGAATTGGAGAGGTAAGCATTGATAATCATCCTTACTGTACAA-GCTACGTCAC
TGTAGCACTGTGACTTTGAGTCATAGAATACAGTTCCTAATTTCATGGTGAAGTTGAACATTTGGTGCATTCTGTATCTT
CCAGTTTGCCTTTGGTAATTTGCACTACTTAACCATTTGGTGTGGTGTTTGGACTGCTCAAGT-----------------
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-------------------------------------------------GCTTCCCGACGTGATATCATTGCATGCATTT
CTCTGATTTAGTTGTCGTCCTGTCTGAATTTGCTGTGATGTTAGTGTGATAAAATAAGGGGTACCAGAGCTTAGGTTCAA
ATATTGCTTTAAACATAGAGAATAAGCCAACTGAGGGAAGGGCCAAATTATATAATAGGAGAAGAAAGGCAAACAAAGTT
GTAGTTGATGTTCTTCATACACCGGTGCATCATGGACATGACAAAATATAAATTCTTGCAACAGGGGGTTGCCATGCCTG
CAATGAATAATATACTTTCAAAATGGGTTCCTGTATCAGAGAGGAGCAGATCATTGGCTCTTGTATATAGTGGGATGTAC
CTAGGGTCAGTGACAGGACTCACATTTTCGCCATTCCTGATACACAAGTTTGGGTGGCCATCAGTCTTCTATTCCTTCGG
CTCTCTTGGGACTGTCTGGTTCGTGACATGGGCGGCCAAGGTACTTCGGTGTTGTGAATTACTGTGCAACTTCTCTGATT
TTGTTTTCATCATGTCTGAATTTGTTGTCTGTTATCTTGAAAGGCTTATAGTACTCCGCTTGAGGATCCGGGGATTAGTG
CTGAAGAAAAGAAGCTTATCATTAGTCAAATCACATCAGGAGAGCCTGTTACAACAATTCCATGGGGAGTAATATTGTCA
AAACCGCCGGTTTGGGCACTTATAGCTTGCCACTTTTGCCATAACTGGGGAACTTTTATCTTGCTCACATGGATGCCTAC
GTACTACAACCAGGTATCATCAACATCGTTGTTACCTAATTGAGCATCATGAACTGCAAACCCCTTTCTTTATAAAGACA
AACTTAATATAAAATAGGTTTTGAAATTCAACCTCACGGAGTCCAGCCTTTTCTGCGTCCTTCCCTGGCTAACAATGGCG
ATTTCTGCAAACGTTGGTGGTTGGATTGCAGACACACTTGTTAGTAGAGGAACATCAGTGACAACGGTTCGCAAGGTAA-
--------------ATTCTGAGTTTATATTCCCCAGTGATGTATTCACTGGGGCTAATATAACCAGGATCCAGTTTTTGA
ACTTGTACTGAAGAAAGATGTCATCAATATTGTTACTCTATGCACGTCCACCTGTTGCAGATCATGCAATCAATTGGTTT
CTTAGGGCCAGCCTTTTTTCTCAGTCAACTGAGCCATATCGATTCACCAGCACTGGCAGTTTTGTGCATGGCTTGTAGCC
AGGTGAGGCTCCCTTTTACTTCTTGTCGTTGATAATATTTTCTTCGTATAGAGCAACTCTGTTTTATATTTGAATCTTTT
TCCAAATGTCAGGGAAGTGATGCATTTTCTCAGTCTGGTCTATACTCGAATCATCAAGATATCGGTCCTCGATACGCCGT
AATCATCTAACTATAGCATAATATTTCGGTGCACTATAATCTTAGATGTTCCGTAAAGTCGTACTGAATAT--GCTACCA
AAAGGTGATGAACTTGCTGTCTTGCAGGGTGTACTACTTGGTCTCTCCAACACAGCTGGGGTTCTAGCTGGTGTATTTGG
CACAGCAGCAACCGGATACATCTTGCAGCACGGTCTGCCCTGATCCTAAACTCTTTACGTTACGCAACATATTACACTGT
CAA-TTGCACGTCTCATCCTTCAAACAAAAATGCAGGTTCTTGGGACGATGTCTTCAAATTGTCTGTAACTCTTTATCTT
GTTGGAACTGTGATATGGAATTTATTTTCAACCGGCGAGAAAATCATCGATTGATATGTATAGCTCGCTTCTGGTTAACG
ACTCATCCCACCTGCTAGTAGTAAATACTGCCCTGGGTGGACACAATTCATTCTGCATGCACTGCTCCAACTCCTGGGAA
GAAAGAAAGAAGCAAACAACAGACTGCCAGATCTAATATGTACCAGCAAGCAACAGCTGCACATAATTCAGGATCTTAAT
TTTGAAATGGAGCATGAATTGAGGACAGGGATGCGCAGGGGCCGGTTGTATAGGGATGTGTAGTGTGCAAGTGATTATAG
GTATCATGTACATATTCTGTCATACACGCATAGTGTTTTTGACCAGTAAGCCTCTTTTCTTTTTCTTTTTGGAATAG---
----CT-------GTGACATATCATCGTAGTCTAGTTTTGTTTCCTGATTATTTCAGGATCATAAACATGGATGCACTGA
ACATTTGATGAGTATTTAACACTCACTTTGATCTATACAACTTTTGTAGCATGTATGTTTAAATGAGGAAGTGCAACTCT
GTTTCATCCTGTGAACGCTCAGATGTTCAGGTTCTTTGTGGTGGAACCAGCCCATCATAATTCAAGTCCTAGACTTGGCA
CTGATGCTCGCATTCAAGCTTCACGACAATGTTTGTTTAGTGGT--------------------------AGATGTTCTC
GTTGACTATGAAACA-----------------------------------------------------------------
---------------------------CATGTGGTTGCTTCGTCAAATCTAAAGATA-------------CATGTGGTGG
CTTCGTCAAATGTAGAGATGTTGTGATCACTCGGTATCACAGAGGTGCTTATAGGCGTAGGGTGTGTGTGTGCG--TTCA
TAAGGGTGACAGAACCGGTGGCTAGGTTTAGGCTCGTCCTCGTCCTCTCACGCATCGCCCCCTCGAGCGACCCGGGGCAA
CCCTTGCTCGTCGCCTCTCTCCCCTCTCCTCCTGGCACTCCTTCCCCCATCGCCATCACAAGGCACCGTCAGGCAAAGCC
TGATCGACGTAGGTGGCGGCGGGGCCTCTTTCCTCTTTGCTCGATCCAAGGGCTGGCTTGGGATGATTCCGTGGGTGGAG
>chr3D_633
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----------------------------------------------------ACAACGCACGGGCACCTACATAGTCCCT
TAAAAAAGTGTCCCTGGGAAGAAATGCAACGCAGATGAGATGATACATGCATGGCATGCCACGTTAGCGTCCAGATGGCG
AGCTGCGGTGCGCAGATAGCCTATAGCCAGACACAATCGTCCCGTCGGGGTGGTCGACCAACGAGAGCCATTCGTCTGCC
CCAGGCGCGTACGATGGCCACTTCGACGCTTCCCTCGCACTCATCGTCGACTA-------------------GGGGAGTC
AAAAAT--------CTAGCTAGCTAGCATCTGCGCCGAGCCGATCGAGCACGCAAGCGAGAGGCCACGTCCGTGCACAGG
CCTCCTCC----CAGGCGCCATGCTCCGCCTGCTCCCGCTCTCCCTCTCCGCCCAGTGCCGGAGCGGCGGCCCGCCGTCG
CACCGCTGCTTCGTCGACGGCGGCTCGCCGTCCCAGAGAGCCGGGCCAAGGCTCCTCGCGAACAAAGGAGTTCGCGTTCG
AGTCCGGAGGCGAGCGCTCCGCGGGGCAGACGTCCAGCCGGACACCCCGCCATCGCGCAGGGACGGGGATAAGCCGCTGC
ACGCGGATGCCGAACAGGGGGAGGGCAGCGGCGTGGAGCTGCTGGACTCGATAAAGAAGCTGCTGCTGGAGGACGCCGAG
CCCGGGGAGGAGGAGCAGGGGCAGTTCCCCAAGCGCTGGGCCATTGTCTTCCTCTGCTTCTCCGCCTTCCTCCTCTGCAA
CATGGACCGCGTACGTGCGCACCCCTAGCTGGGCTGCTTCCCCCACCTCCTCACTCCTCACCACCGACATCCATAGCTAC
TGAACCTCCAGCAATGGTTGCTATTAATTTGCAGGTAAACATGAGCATTGCCATCATGCCCATGTCCGCGGAGTACGGCT
GGAACCCGCAAACCGTCGGCCTCATCCAGTCGTCCTTCTTTTGGGGCTACCTCCTAACTCAGGTCAGTGGTTCAGACCGG
GGAGCAACCATTGATTGGTTCATACTGAACATGCACACACTCTGTATCTAAGATTCATGGAAGATCCGCAATTTACTCCT
CCCCTTGGGTAGTACTAGTATCTAACACCATTGTCATTGCAGATAGCAGGAGGGATATGGGCAGACAAAGTTGGGGGGAA
GACTGTTCTTGGTTTCGGGGTGATTTGGTGGTCAGTCGCCACAGCTCTTACGCCTGTGGCGGCAAAGCTAGGCTTGCCAT
TTCTCCTTGTTGTGCGTGCTTTTATGGGAATTGGAGAGGTAAGCCTTGATAATCATCCTTACTGTACAAAGCTACGTCAC
TGTAGCACTGTGACTTTGAGTCATAGAATGCTGTTCCTAATTTCATGGTGAAGTTGAACATTTGGTGCATTCTGTGTCTT
CCAGTTTGCCTTTGGTAATTTGCACTACTTAACCGTTTGGTGTGGTGTTTGGACTGCTCAAGTTTTTTTATTTTCAAAAG
GAGGATGCACCCTCGCCTCTGCATCTGGACGATGCATGCAGCCATATTATTAATTATTCCCAAAGACCTTACAAGGTAAT
ACATCAATAAGCCTGAAGCCATCATCTTGGCAACGCCTGTTGCTACTCCTATCCCTTGATGAAGGGGTGCTGAATGTCTG
AGCCTAATACCAAACAGACATCGCACCAAAGTCTAAAGCCGGATGCCTCATCCAAACCACTACCTAGACTGGGTCACACA
CCTGTCCGGCACACTCCCAGTGAGCACCGCACGCTGCAAGGGCCATCACCTCCAACTTCCATCGATCCATCCTCAGAGAA
GAACTGATGCATCGACCTTACTAGGCCTCTCTGCCATCGACGCCACCACGACGTCAGACAGCGTCGCCCTCCTGCGCGAG
TCCGTCAACCCGCATCGGACGCCGAGCCTGCACCGCGCCACGCCACTGAGACCTGCCGTCATCGATGCGGAAGATGAAAC
CCCGCTCCACCTCTTGGCCCTTCCAATCAGCACCGGCTCCAAAACGATGCCCTCAAGAGAGAGAACGACACCATAGTTTC
CGTCATCATCCGATCTGGGAGACCCAGATCCAGGGTTTCCCCCGAAGCAGATGCCTCCTGGAGGGAGAGGGGCATGCCAA
TTGCAGCTGCCCACGACCACTTAGCTCTGTCGACGACACCTTCAAGAAGGACACGAGGCCATGAGTGCCGTCGCCGCCCT
AGGGTTTTCACCCGAGAAACCGTGGAGTGGGAAAAGGTAGGGCGGACCCGAACGACGTCTCCAGGAAGAGAAACGGCACC
CTCGGGCGTCGTCCCCGTCGCGGCCGGCAGGAGCCGACCAGGGAATTATCCCAATTCGAATCCCCACCTCCCGCTCCGCC
CACCCGGTGCCTGGCAAGCAGCGCAGCCATGTCCGTTACGACGGAGTGCATGATGCAAGTATTGGAGGAAGAAGCAGCTC
GATGCCGTTGCTGCGGCACCAACCCCCCGGTGGATCACCGGCCATCCGACCCGATCCCCGGCAGCCCGCCCGCCCCGCCG
CGCCACCAGACAGGGAGGCCAACCTCGGGGCCGCCGCCCCGGATCCAAGGCCCTCCGCCCTAGATCGGGAGGAGCAGCGC
CAGCACTGACACCACAGCCGCCGATAGGACGCTGGCCAGCCACCACACCGCCGAAGTCCAGATCTGGGCCGCCATGAACC
AGATTGGCGCCACCGCAGCCCAGATCGGGGTCACACCCTCGAGCCAGGGAGCCCCGCGTCACCCTTTGACCCGTGAGAGG
GAGGAGTGCCTCTGCCGCCGCCGGCGTACGCACGGGCTAAGCCCGGCGCCTACCACCAGCGGCAACAGAGGGGAGGGAGA
GGAAGGGGCGGAGACCCGGCGGCTAGGGGTGGAGCCCCTCGGTCGCCCGTGCGGGGGGCGACAGGGGGGAGGGGAGGAGA
GGAGAGGAAGTAAATCAGTACAATGAAATAGTTTTTGGACTGCTCAAGTGCTTCCCGAAGTGATATCATTGCATGCATTT
CT-TGATTTAGTTGTCGTCCTGTCTGAATTTGCTGTGAAGTTAGTGTGATAAAATAAGGGGTACCAGATCTTAGGTTCAA
ATATTGCTTTAAACGTAGAGAATAAGCCAACTGGGGGAAGGGCCAAATTATATAATAGGAGAAGAAAGGCAAACAAAGTT
GTAGTTGATGTTCTTCATACACCGGTGCATCATGGACATGACAAAATATAAATTCTTGCAACAGGGGGTTGCCATGCCTG
CAATGAATAATATACTTTCAAAATGGGTTCCTGTATCAGAGAGGAGCAGATCATTGGCTCTTGTATATAGTGGGATGTAC
CTAGGGTCAGTGACAGGACTCGCATTTTCGCCATTCCTGATATACAAGTTTGGGTGGCCATCAGTCTTCTATTCCTTCGG
CTCTCTCGGGACTGTCTGGTTCGCGACATGGGCGGCCAAGGTACTTCGGTGTTGTGAATTACTGTGTAACTTCTCTGCTT
TTGTTTTCGTCATGTCTGAATTTGTTGTCTGTTATCTTAAAAGGCTTATAGTACTCCACTTGAGGATCCGGGGATTAGTG
CTGAAGAAAAGAAGCTTATCATTAGTGAAACCACATCAGGAGAGCCTGTTACAACAATTCCATGGGGAGTAATATTGTCA
AAACCGCCTGTTTGGGCACTTATAGCTTGCCACTTTTGCCATAACTGGGGAACTTTTATCTTGCTCACATGGATGCCTAC
GTACTACAACCAGGTATCATCAACATCGTTGTTACCTAATTGAGCATCATGAACTGCAAACCCCTTTCTTTATAAAGACA
AACTTAATATAAAATAGGTTTTGAAATTCAACCTCACGGAGTCCAGCCTTTTCTGCGTCCTTCCCTGGCTAACAATGGCG
ATTTCTGCAAATGTTGGTGGTTGGATTGCAGACACACTTGTTAGTAGAGGAACATCAGTGACAACGGTTCGCAAGGTAAA
TTAAACACTTTGATATTCTGAGTTTATATTCCCCAGTGATGTAT-----GGGGCTAAGATAACCAGGATCCAGTTTTTGA
ACTTGTACTAAAGAAAGATGTCATCAATATTGTTACCCTATGCACGTCCACCTGTTGCAGATCATGCAATCAATTGGTTT
CTTAGGGCCAGCCTTTTTTCTCAGTCAACTGAGCCATATCGATTCACCAGCACTGGCAGTTTTGTGCATGGCTTGTAGCC
AGGTGAGGCTCCCTTTTACTTCTTGTCGTTGATAATATTTTCTTCGTATAGAGCAACTCTGTTTTATATCTGAATCTTTT
TCCAAATGTCAGGGAAGTGATGCATTTTCTCAGTCTGGTCTATACTCCAATCATCAAGATATCGGTCCTCGATACGCCGT
AATCATCTGACTATAGCATAATATTTCAGTGGACTATAATCTTAGATGTTCTGTAAAGTCGTACTGAATATATGCTACCA
AAAGGTGATGAACTTCCTGTCTTGCAGGGTGTACTACTTGGTCTCTCCAACACAGCTGGGGTTCTAGCTGGTGTATTTGG
CACAGCAGCAACTGGATACATCTTGCAGCACGGTCTGCCCTGATCCTAAACTCTTTACGCTACGTAACATATTACACTGT
CAATTTGCACGTCTCATCCTTCAAACAAAAATGCAGGTTCTTGGGACGATGTCTTCAAATTGTCTGTAACTCTTTATCTT
GTTGGAACTGTGATATGGAATTTATTTTCAACGGGCGAGAAAATCATTGATTGATATGTATAGCCCGCTTCTGGTTAACG
ACTCATCC---CTGCTAGTAGTAGATACTGCCCTGGGTGGACACAATTCATTCTGCATGCACTGCTCCAACTCCTGGGAG
GAAAGAAAGAAGCAAACAACAGACTGCCAGATCTAATATGTACCAGCAAGCAACAGCTGCACATAATTCAGGATCTTAAT
TTTGAAACGGAGCATGAATTGAGCACAGGAACGCGCAGCGGCCGGTTGTATAGGGATGTGTAGTGTGCGAGTGATTATAG
GTATCCTGTACATATTCTGTCATACACGCATAGTGTTTTTGACCTGTAAGCCTCTTTTCTTTTTCTTTTTGGAATAACTC
ACTTCT-------GTGACATATCATCATAGTCTAGTTTTGTTTCCTGATTATTTCAGGATCATAAACATGGATGCACTGA
ACATTTGATGAGTATTTAACACTCACTTTGATCTATACAACTTTTGTAGCATGTATGTTTAAATGAGGAAGTGCAACTCT
GTTTCATCCTGTGAACGCTCAGATGTTCAGGTTTTTTGTGGTGGAACCAGCCCATCATAATTCAAGTCCTAGACTTGGCA
CTGATGCTCGCATTCAAGCTTCACGACAATGTTCGTTTAATGG-----------------------GAGGAGATATTCTC
GTTGACTACGAAACGCCTGTGGTGGCTTCGTCAAATCTAAAGATGTTGTGTCAACGAAACGCATGTGGTGGCTTCGTCAA
ATCTAAAGATGTTGTGTCAACGAAACGCATGTGGTGGCTTCGTCAAATCTAAAGATGTGTCAACGAAACGCATGTGGTGG
CTTCGTCAAATCTAAAGATGTTGTGACCGCTCAATATCACTAAGGTGCTTATAGGCGTAGGGTGTGCGTGCGTGTATTCA
TAGGGGTGACAGAACCGGTGGCTAGGGTTAGGCTCGTCCTCGTCCTCTCACGCGTCGCCCCCGCGAGCGACCCGGGGCAA
CTCTTGCTCGTCGCCTCTCTCCCCTCTCCTCCTGGTACTTC-TCCCCCACCGCCATCACAAGGCGCCGTCAGGCAAAGCC
CAATCGACGTAGGTGGCGGCGGGGCCTCTTTCCTCTCCGCTTGATCCAAGGGCTAGCTTGGGATGATTTCGCGGGTGGAG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S---
------------------------------------S-------SS--S---------------------S---S-----
-----S-------------SSSSSSSSSS-----------------------S----------------S----------
-----------S------S-----S-----SSSSSSSSSSSS--------SS--------S--SS-----S---S-----
--S--------S------------S-------------------------------S-S-----------S---------
-----S---------------S--------------S-SS--SS-------S---------------S------------
-----S--S----------------------S--S------------S---S-------------------------S--
----------------S--------------S-S----------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
------SSSSSSSS--------------------------S---------------------------------------
------S----------------------------------S--------S--------------------------S--
--------------------------------------------------------------------------------
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--------------------------------------------------------------------S-----------
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----S--------------------------S------------------------------------------------
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-------------------------------------------S------------------------------------
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------------------------------------------------------------------------------S-
-------------------------------------------------------S------------------------
-----------------------------------S--------------------------------------------
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----------------S----------------------------------------------------------S----
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--------------------------------------------------------------------------------
-----------------------S---------------------------S----------------------------
-------S---------------------------------------S--------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S------------------S-------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
----------------------------------SS--------------------------------------------
---S-----------S----------------------------------------------------------------
------SSSSSSS-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
------------------------S------------------SSSSSSSSSSSSSSSSSSSSSSS--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----S------SS-S----------------------S-S-----SS-----
---------------S---------------------S--S------------S-S-S-----S----------------
-------------------------S------SSS-S----------------------S------S-S-----------
---------S---------S--------------------------------S---------------------------
>forward_422
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--CCCGATCAACAGATGGCCTT----------------------------------------------------------
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>reverse_2032
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-------------------------------GGTTCCTAATTTCATGGTGAAGTTGA-----------------------
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>forward_967
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-------------------------------------------------------------------AGGCCGGGGAGTC
AAAAATC-------------------------------------------------------------------------
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>reverse_4036
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-----------------------------------TCTGATACACAAGTTTGGGTGG-----------------------
--------------------------------------------------------------------------------
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>forward_968
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--------------------------------------------------------------------GGCCGGGGAGTC
AAAAATCT------------------------------------------------------------------------
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>reverse_4932
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---------------------------------------------------TGCAACTCTGTTTTATATCTGAATCTT--
--------------------------------------------------------------------------------
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>forward_969
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--------------------------------------------------------------------GGCCGGGGAGTC
AAAAATCTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4968
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-------ATCAGGGAAGTGATGCATTTTCT--------------------------------------------------
--------------------------------------------------------------------------------
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>forward_4036
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---------------GGACTCGCATTTTCGCCATTT--------------------------------------------
--------------------------------------------------------------------------------
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>reverse_6358
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-------------------------------------TCTGGTCCTCTCACGCTTTG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
