>input_sequence_27628
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--------------------CCCACCTCGCATGCCGCCGCTCCCCCCGAGGCGGCGGCGCAGCTGACCCC-----ACCGC
CCCTCCGGGAGCCCGCCGACATGGGCGGGGTGACCTCCACCATCGCCGCGCGCTTCGCCTTCTTCCCGCCCACGCCGCCC
TCCTACACGGTCGTCGCCGACGCGGCCACCGGCCGCCTCCTCATCCCCGAGATCTCTCGGCCCCCCGCGCGCCGCCGGAG
GCGAGACGGCGGCGGGGACTCCTCCTCCGG---CGCCGCCGCCGCCGAGGAGGAGGACGCCACGGAGGTGGTGCGCCTCC
GCACGCGCCGCGGGAACGAGATCGTGGCCGTCTACGTGCGCCACGCGCGGGCCTCCGCCACGCTGCTCTACTCCCACGGC
AACGCTGCCGACCTCGGCCAGATGTACGGCCTCTTCGTCGAGCTCAGCCGCCGCCTCCGCGTCAACATTTTCGGGTAATG
CTCCCCTCCCCCCGCCTCACTT---------------------------TCGAAGCCGGACTTGCTTGCGGCTGAGAAG-
TTTCCGTTAGGGGAAACTTCCGGGAGACGATTAGGAAAGGTGCGTACTGGGTAGTAA------------ATGGATATGTG
GTGTGCATTTATTAGTG---TTAGATTCGGTGTGCCTATTTCTGATTGGTTGCTGTAATTTTGCAAAAGGGGGTTTTCTA
TATTATTTCGGG-GTAA----------GATCATCTTATTTTGGTGC--T-ACTTCACTGCTGCAGATCCTTTTAGACTCA
AATTTTCGAATTGCACACAAGATAAGGAAAACAAAACTAGTTACTAGTATTAG-TGCGGATGAAATTCATCTGTATTTGT
TG---------------------------------GTTCCTGCTTAGCACTATTTAATCTGTCCAGCCATGAAAATTATC
TTTGTATTGCTGTCCAACACGGCGAGACCCTCAATGTATATTTGGTTCTTGCTTTTGGTGT--TAAGGGACACACCGTAT
CAGTCCATTAGTTTAGAAAATCTCGACCTCATTTCTAAAATTAGATGGATTTCAGAAAACAG--GCGGTTGCCTAGTAG-
TGTGCTGTATATGCTACAGCAGAAACTCTGTGACTTGAGTTTA--ATAGTTCCAGTTCCAGGCTATCTCTTGTTAGTTAT
ACCGTTATACGGTAACAATGGGGCCATGGTACTGTACCCGACATTGTGGGGGTGCT-AAAGAAATAAGATAATGTATTTT
GTGGAGGTAGCTTGGATCTGACACAAGAAACTTTTCGAATGATGAGGAGATGGTATGTTGTATTTCGAGGCATAATTAGT
GGGTCTGTCTAGTGGATCACCAATGTGCCAGATGATTGGAATTAAGCAGACATGGATCCCAAGA-CCCTCCCCCCACACC
ACCCACACACACGCTTGATTTATGCTCAA---------------------------------------------------
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---------------------------AGTTAGTACCCTACAGAAGAGTATGTTTCCCCCCTGACATCCATCTTAATAGA
CCCCCC-TACGTGTTGCAGGTATGATTATGCTGGTTATGGGAGGTCTACAGGGAAGGTATGTTTGTGTTT--TCTGCTTC
ATCTTTAACTTACGTGGCAATGCTAATCTTGTATGCAAGCATATTTTAATGGACAATTTATTCTTCCATTGAACAGCCCA
CTGAGTATAATACATATGCAGACATTGAAGCAGCATATAACTGCCTCAAGGAAAAATATGGTGTGCCAGATGAGGATATA
ATTTTGTATGGCCAATCTGTTGGAAGTGGTCCAACCATTGATCTTGCTTCACGGTTGCCAAACTTGCGAGCTGTGGTTCT
GCACAGTCCCATTTTATCTGGACTGAGAGTACTATATCCAGTCAAGAAAACTTTTTGGTTTGACATTTACAAGGTAAATT
CGATTTGCAC------CCTCCTCATCAGAGTTGG---TGATAAATAGCTGATAT-ATTTTCCCTCCATTTTGTAGAATGT
TGACAAGATCAGCTTGGTAAATTGTCCAGTTCTTGTCATTCATGTAAGTTCTATTAGTTTACCCTACCCTCTTCTTTTTC
AATACTATCTGCCTCTTGCTGTCTTGCATTACCTCTCTGGTGGGATAGTGGGATTTGTTTTG-GATTTGTAATACCACTA
CATTGAGAAGCTGAAT-ATAAATGATTCATTTTTAAATGCTCACCAAGCCAAGTATGTAAAAATTACACAAAAATGAACC
AAATGAACAATCAGATGTTGAAGTTGCTGGGGTGATATAACATGTATCACCACAGTTTTTATATCAGAATTTTAGTTATT
CAGTAGT--------CATAACTGAAACAGTTATAATACTTATGCCAGGGCACGTCAGACGACGTAGTTGATTGGTCCCAC
GGAAAGCAGCTATGGGAGCTTTGCAAGGTGAAACATTCACCTTTGTGGCTAAGTGGCGGTGGGCACTGCAACCTTGAGCT
GTATCCTGACTACATCAGGCACTTGAAGAAGTTTGTGTCGAGCCTTGGCAAAAAGTCTACAAAACCTGACTTGAAAGAGT
TACCAGCAACGGAAGACACATCTCGTAAAGACGCAGAATCTGTATCCTCGGACAAAACCCAAGAAGCTGCAAAGTGCCGG
CAGATCTCGCGGAAGAGCTTGGATAGCAGAGTTGGGAAATCCAAAACAGTGGATGTTCCTGAAAAGCCACGAATGAGCTC
AGATGACGTTGACAAGTTTAGGAGGAGAAGATGCTTGGTTTGGTGATCTATGGTATGACGTCTGCACAGTTCATGGAGTA
GTTTCTGAGCACCATGGAATGGGAATCAAGCAACTGTGTCGTAGTGTATAGCGAGGAACAACGGCGACAGTTCCTGCGGT
AGAGGGGATAATAGCTGTGTTTAAATGTGGGAGAAGAAGAATCAGGATGCTGGTGAATAAGCTGTTATTTATC-AA----
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>chr3B_1_TraesCS3B01G295700
TTGGGTGGCTGTGCACATGG-----ATCAAAAGCGAACAAGGAGGAAACGGACGGAGAGA----CCCCCGTCCACCGATT
GGACTTTCCCC-ACCGATCCCTATCCAACCGGCAGGAGTGAAAAGATCGATTGTTGCGTCCGGCGCACTCGCACTCTGGG
ACGGACGGGTTCACCCGTCGGCGCATCGTGTGTGTGTGCCTGGGCTCGCGTGCG----GGGGCGTCGTGCCTGCCCGTTC
T----GTATATGCGTGTAGGTTTATTA--CTTTTGCTCGAGCTCTGCTAATT-AAGTGTAGGAGACACTCCAAGCTCGAG
T-----ACATGACCCGCCCCGATGAAGCGCAGCTAAATAAAGAGGGAAAGACCGACGGGTTCTTTAGAAAAGGAACCATA
CAGCTTGTCATGTACTGGTATGCTGCAATCGTCACCCCTTTACACCCCCCATCCTAAAGACAACCTTTTTCTTTTATCGG
GAAACTAAAAAGGGAACCAACCTCGCCACGTTCTCTCCTTCCACATACTCCATAGTACATAGCTGGACTCCTAGTTCTCT
TCGCCTAACCTAAACCATCTCTAGCCATCCATTTACAACTGTGATGATCCATTTTAATTAG----TTTTTTTGTTGAGGC
AAATCCATTTTGATTAGTAAAAGAGAAAGAA--GGGAGAAATCTTTCACTGGTTGGCCACCCACCAATCCACCATAGACC
GACTAGTCTACTAGGACGACGACCGCAGAATTGGCCACGGCAGCCGGCGGCCTCAGCCGATCCGCCACATTCCGCTAGTC
CGGGTGAGTCCAACCGCTTCGCTCCTTTCGCTAAATC-----TAAAGGAAACCCCGAGCTAAATCCAACACTAGAATTAA
GCACACACACACTCTTCCCCTCAAAAAAAATAAAAAAAATTAAGCACACTCGCCACGAAAAGTTCGCTCCAGCGAGTGAG
CTCCCA----CCTCCCT--CCCCTCCTCTCTGCTCCC-----------------ACCAGGCCACCACCACCTCCACCAAA
CCCTCCGATCCAAACCCTCTCCCACCTCGCATGCCGCCGCTCCCCCCGAGGCGGCGGCGCAGCTGACCCC-----ACCGC
CCCTCCGGGAGCCCGCCGACATGGGCGGGGTGACCTCCACCATCGCCGCGCGCTTCGCCTTCTTCCCGCCCACGCCGCCC
TCCTACACGGTCGTCGCCGACGCGGCCACCGGCCGCCTCCTCATCCCCGAGATCTCTCGGCCCCCCGCGCGCCGCCGGAG
GCGAGACGGCGGCGGGGACTCCTCCTCCGG---CGCCGCCGCCGCCGAGGAGGAGGACGCCACGGAGGTGGTGCGCCTCC
GCACGCGCCGCGGGAACGAGATCGTGGCCGTCTACGTGCGCCACGCGCGGGCCTCCGCCACGCTGCTCTACTCCCACGGC
AACGCTGCCGACCTCGGCCAGATGTACGGCCTCTTCGTCGAGCTCAGCCGCCGCCTCCGCGTCAACATTTTCGGGTAATG
CTCCCCTCCCCCCGCCTCACTT---------------------------TCGAAGCCGGACTTGCTTGCGGCTGAGAAG-
TTTCCGTTAGGGGAAACTTCCGGGAGACGATTAGGAAAGGTGCGTACTGGGTAGTAA------------ATGGATATGTG
GTGTGCATTTATTAGTG---TTAGATTCGGTGTGCCTATTTCTGATTGGTTGCTGTAATTTTGCAAAAGGGGGTTTTCTA
TATTATTTCGGG-GTAA----------GATCATCTTATTTTGGTGC--T-ACTTCACTGCTGCAGATCCTTTTAGACTCA
AATTTTCGAATTGCACACAAGATAAGGAAAACAAAACTAGTTACTAGTATTAG-TGCGGATGAAATTCATCTGTATTTGT
TG---------------------------------GTTCCTGCTTAGCACTATTTAATCTGTCCAGCCATGAAAATTATC
TTTGTATTGCTGTCCAACACGGCGAGACCCTCAATGTATATTTGGTTCTTGCTTTTGGTGT--TAAGGGACACACCGTAT
CAGTCCATTAGTTTAGAAAATCTCGACCTCATTTCTAAAATTAGATGGATTTCAGAAAACAG--GCGGTTGCCTAGTAG-
TGTGCTGTATATGCTACAGCAGAAACTCTGTGACTTGAGTTTA--ATAGTTCCAGTTCCAGGCTATCTCTTGTTAGTTAT
ACCGTTATACGGTAACAATGGGGCCATGGTACTGTACCCGACATTGTGGGGGTGCT-AAAGAAATAAGATAATGTATTTT
GTGGAGGTAGCTTGGATCTGACACAAGAAACTTTTCGAATGATGAGGAGATGGTATGTTGTATTTCGAGGCATAATTAGT
GGGTCTGTCTAGTGGATCACCAATGTGCCAGATGATTGGAATTAAGCAGACATGGATCCCAAGA-CCCTCCCCCCACACC
ACCCACACACACGCTTGATTTATGCTCAA---------------------------------------------------
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---------------------------AGTTAGTACCCTACAGAAGAGTATGTTTCCCCCCTGACATCCATCTTAATAGA
CCCCCC-TACGTGTTGCAGGTATGATTATGCTGGTTATGGGAGGTCTACAGGGAAGGTATGTTTGTGTTT--TCTGCTTC
ATCTTTAACTTACGTGGCAATGCTAATCTTGTATGCAAGCATATTTTAATGGACAATTTATTCTTCCATTGAACAGCCCA
CTGAGTATAATACATATGCAGACATTGAAGCAGCATATAACTGCCTCAAGGAAAAATATGGTGTGCCAGATGAGGATATA
ATTTTGTATGGCCAATCTGTTGGAAGTGGTCCAACCATTGATCTTGCTTCACGGTTGCCAAACTTGCGAGCTGTGGTTCT
GCACAGTCCCATTTTATCTGGACTGAGAGTACTATATCCAGTCAAGAAAACTTTTTGGTTTGACATTTACAAGGTAAATT
CGATTTGCAC------CCTCCTCATCAGAGTTGG---TGATAAATAGCTGATAT-ATTTTCCCTCCATTTTGTAGAATGT
TGACAAGATCAGCTTGGTAAATTGTCCAGTTCTTGTCATTCATGTAAGTTCTATTAGTTTACCCTACCCTCTTCTTTTTC
AATACTATCTGCCTCTTGCTGTCTTGCATTACCTCTCTGGTGGGATAGTGGGATTTGTTTTG-GATTTGTAATACCACTA
CATTGAGAAGCTGAAT-ATAAATGATTCATTTTTAAATGCTCACCAAGCCAAGTATGTAAAAATTACACAAAAATGAACC
AAATGAACAATCAGATGTTGAAGTTGCTGGGGTGATATAACATGTATCACCACAGTTTTTATATCAGAATTTTAGTTATT
CAGTAGT--------CATAACTGAAACAGTTATAATACTTATGCCAGGGCACGTCAGACGACGTAGTTGATTGGTCCCAC
GGAAAGCAGCTATGGGAGCTTTGCAAGGTGAAACATTCACCTTTGTGGCTAAGTGGCGGTGGGCACTGCAACCTTGAGCT
GTATCCTGACTACATCAGGCACTTGAAGAAGTTTGTGTCGAGCCTTGGCAAAAAGTCTACAAAACCTGACTTGAAAGAGT
TACCAGCAACGGAAGACACATCTCGTAAAGACGCAGAATCTGTATCCTCGGACAAAACCCAAGAAGCTGCAAAGTGCCGG
CAGATCTCGCGGAAGAGCTTGGATAGCAGAGTTGGGAAATCCAAAACAGTGGATGTTCCTGAAAAGCCACGAATGAGCTC
AGATGACGTTGACAAGTTTAGGAGGAGAAGATGCTTGGTTTGGTGATCTATGGTATGACGTCTGCACAGTTCATGGAGTA
GTTTCTGAGCACCATGGAATGGGAATCAAGCAACTGTGTCGTAGTGTATAGCGAGGAACAACGGCGACAGTTCCTGCGGT
AGAGGGGATAATAGCTGTGTTTAAATGTGGGAGAAGAAGAATCAGGATGCTGGTGAATAAGCTGTTATTTATC-AAAGAG
GGTACGTCTCAACATGGTAACTTTCTCGGTTAATTAACCTGTATTGCAACCCCCGGTGGCGTTAGGATTTCCATCATGTA
AAAGTGTACCGTGTTATTGTCTGTAATCACGAGGGACAAGGATAGAACATTTGCGGCCACTTTGTGGCGCGGTCTAAAGT
CTTGGAGCAATCACAAGAAGCAACATATTCTAGTCTGGATATGCAAATATAGTGTTAATATGTTTTGTGGCTTAAAAGGA
ACTTTGCATTCGTTGCGTCTTTCTGCACCTTCATTTGTGTAC----TACTGTATGTTACTTAGAATCTGACTGTTGGGGC
TGCAGAATAGAGAGAACTCAGGATCAGGAGAACACAATATGGTAAAAACCTATGTAATCATATGTATCATATACCCAGTT
CAGCACTCCACTCCAATGTACGTATGCACTATGTACAGTACTGTCTCTACTGTGGCAGTTTAAAAAACCAAACACATATT
TACATCACCTGGAAGGGACAAAAAA--GAATCGTCGGATCGCTCATCATACACGGCAAGCAAATCTCTCAACAGCGATGA
AAT-AAAACTCGGCCGGCCGCAAACACTGATCTA---AT-CTACTACTGGCTGGTGTTAGGGGTGGTGGTCCTGCTGTCC
CAGGGAGCGTGCACCGTGTTGGGGGAGATGGGCTCGGCAAAGTCCTTCTTGCCTTTGCCTCCACCGTCTTTGTGACCCAG
GCACTCATCCTGGATGGCCCTGAGCACGTCCAGCACCTCCCTTATCGGCGGGCGCATCTCGCCGTTCTGCTGCAGGCACC
GGAACGCCAGCTCCGCCACCATGGTCATCATCTTCCTCGCCGCCGGGTCCGACTCGTATCCCAGCTCCACGTCCACCAGC
TCCTCCAGCCGGCACTTCTGGATCTTGCTGATGGCCATGCCGGCCAGGTTGATCTCGTTCCTCTGCCGGGTGATGTCCAC
GGCGGGCTTGGACGAGATGAGCTCCACCAGCACCACGCCGAAGCTGT
>chr3A_6
-----TGGCTGTGCACATGGATCAAATCAAAAGCGAACAAGGAGGAAACGGACGGAGAGAGAGACCCCCGTCCACCGATT
GGACTTTCCCC-GCCGATCCCTATCCAACCGGCAGGAGGGAAAAGATCGATCTTTGCGTCCGGCGCGCTCTGGGAC----
-CGGACGGGTTCACCCGTCGGCGCGACGTGTGTGTGTGCCTGGGCTCGCGCG-G----GGGGCGTCGTGTCTGCTCGTTC
GTTCCGTATATGTGTGTAGGT---TTA--CTTTTGCTGGAGCTGTGCTAATTAAAGTGTAGGAGACACTCCAAGCTCGAG
TCGAGTACATGACCCGCACCGATGAAGCGCAGATAAATAAAGCGGGAAAGACCGACGGGTTCTTTACAAAAGGAGCCATA
CAGCTTGTCATGTACTGGTATGCTGCAATCGTCACACCTTTACA-CCCCCATCCTAAAGAGAGCC-TTTTCTTTTATCGG
GAAACTAAAAAGGGAGCCGACCTCGCCACGTTCTCTCCTTCAACGT--------------------ACTCCTAGTTCTCT
TCGCCTAGCCTAAACCATCTCTAGCCAACCATTTACATCTCCGACGATCCATTTTAATTGGTTCTTTTTGTTGTTGAGGC
AAATCCATTCTGAGTAGTAAAAAGAGAAAGAATGGGAGAAATATTTCACTAGTTGGCCACCCACCA--------TAGACG
ACG---------------------------------ACGGCAGCTGGCGGCCTCAGCCGATCCGCCACATTCCGCTAGTC
CGGGTGAGTCCAACCGCTTCGCTCCTTTCGCTAAATCTAAAGTAAAGGAAACCCCGAGCTAAATCCAACGCTAGAATTAA
ACACG-------------------------------------------CTCGCCACGGAAAGTACGCACCAGCGAGTGAG
CTCCCACCTCCCTCCCT--CCCCTCCTCTCTGCTCCC-----------------ACCA-----------------CCAAA
CCCTCCGATCCAAACCCTCTCTCACCTCGCATGCGGCCGCGCCCCCCGAGGCGGCGGCGCAGCTGACCCCTTCCCACCGC
CGCTCCCGGAGCCCGCCGGCATGGGCGGGGTCACGTCCACCATCGCCGCGCGCTTCGCCTTCTTCCCGCCCACGCCGCCC
TCCTACACGCTCGTCGCCGACGCGGCCACCGGCCGCCTCCTCATCCCCGAGATCTCCCGGCCCCCCGCGCGCCGCCGGAG
GCGGGACGGCGGCGGGGACTCCTCCTCAGGTGCCGCCGCAGCAGCCGAGGAGGAGGACGCCACGGAGGTGGTGCGCCTCC
GCACGCGCCGCGGGAACGAGATCGTCGCCGTCTACGTGCGCCACGCGCGGGCCTCCGCCACGCTGCTCTACTCCCACGGC
AACGCCGCCGACCTCGGCCAGATGTACGGCCTCTTCGTCGAGCTCAGCCGCCGCCTCCGCGTCAACATTTTCGGGTAATG
CTCCCCTCCCCCCGCCTCACTTCGCTTCATTCT---------TACTTCTTCGAAGCCGGAGTTGCTTGCGGCTGAGAAGG
TTTCCATTAGGGGAAACTTCCGGGAGACGTTTGGGAAAGGTGCGTACTGGGTAGTAGTAGTAGGAGTATATGGATATGCG
TTGTGCATTTATTAGCAGTATTAGATTCCGTGTGCCTATTTATGAATGGTTGCTGCAATTTTGCAAGAGGGGTTTTTCTC
TATTTTTTCGGA-GTAAATTGGCGAAAGATCATCTTATTTAGGTAGTACCACTTCACTGCTGCAGATCCTCTTCCTCTCA
AATGTTTGAATTGCACACAAGATAAGGAAAAAGAACCTTGTTGCTAGTATTAGCTGCGGATGAAATTCAGCTGTATTAGC
TGCC-----------ACGTTTCCCCGTTCCAGTTAGTTACTGTTTAGCACTATGTAATCTGTCCAGCCATGAAAATTATC
TTTATATTGCTGTCCAACACGGCGAGACCCTCAATGTATATTTGGTTCTTGCTTTTGGTGT--TAAGGGACACACCATAT
CAGTCCATTAGTTTAGAAAACCTCGACCTTATTTCTAGGATTAGATGGATTTAAGAAAACAG--GCGGTTGCCTAGTAG-
TGTGCTGTATATGCTACAGCAGAAACTCTGTAACTTAAGTTTAATATAGTTCCAGTTCCAGGCCATCTCTTGTTAGTTAC
ACCGTTATACGGTAAGAATGGGGCCATGGTACTGTACCCGACATTGTGGGGGTGCT-AAAGAAATAAGATAATGTATTTT
GTGGAGGTAGCTTGGATCTGACACAAGAAACTTTTCGAATGATGAGGAGAGGGTATGTTGTATTTCGAGGCATAATTAGT
GGGTCTGTCTAGTGGATCACCAATGTACCTGATGATTGGAATTATGCAGACATGGATCCCAAGACCCCTCCCCCCACACC
ACCCACACACTCGCTTGATTTATGTTCAA---------------------------------------------------
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---------------------------AGTTAGTACCCTACAAAAGAATATGTTTCCCCCCTGACATCCATCTTAATAGA
CCCCCCCTACGTGTTGCAGGTATGATTATGCTGGTTATGGGAGGTCTACAGGGAAGGTATATTTGTGTTTGCGCTGTTTC
ATCTTTAACTTACATAGCAATGCCAATCTTCTATGCAAGCATATCTTAATGGACAATTTATTCTTCCATTGAACAGCCCA
CTGAGTATAATACATATGCAGACATTGAAGCAGCATATAACTGCCTCAAGGAAAAATATGGTGTGCCAGATGAGGATATA
ATTTTGTATGGACAATCTGTTGGAAGTGGTCCAACCATTGATCTTGCTTCACGGTTGCCAAATTTGCGAGCTGTGGTTCT
TCACAGTCCTATTTTATCTGGACTGAGAGTGCTATATCCAGTCAAAAAAACTTTTTGGTTTGACATTTACAAGGTTAATT
CGATTCCCCCCCCCCGCCCCCTCCCCAGAGTTGTTGATGATAAATGGCTGATAAAA-TTTTCCTCCATTTTGTAGAATGT
CGACAAAATCAGCCTGGTGAATTGTCCAGTTCTTGTCATTCATGTAAGTTCTATTAGTTTACCCTACCCTCTTCTTTTTC
AATACTGTCTGCCTCTTGC--------ATTGCCTCTCTGGTGGGATAATGG-----------------------------
-ATTGAGAAGCTGACA-ATAGATGATTCATTTGTAAATGCTCACCAAGCCAAGTATGTAAAAATAAAACAAAAATGAATC
AAATGAACAATCAGATGTCAAAGTTGCTGGGGTGATAATC----TAACACTAGAGTTTCTACTTTACAATTTTGGTGCTT
CAGTTGCCATAAGCCCATAACTGAAACAATTATAATACTTATGCCAGGGCACGTCAGATGATGTTGTTGATTGGTCCCAT
GGAAAGCAGCTATGGGAGCTTTGCAAGGTGAAACATTCGCCTTTGTGGCTAAGTGGCGGTGGGCACTGCAACCTTGAGCT
GTATCCTGACTACATCAGGCACTTGAAGAAGTTTGTGTCGAGCCTTGGCAAAAAATCAACGAAACCTGACTTGAAAGAGT
TACCAGCAACAGAAGACACATCTCGCAAAGACGCAGAATCTGTGTCCTCGGACAAACCCCAAGAAGCTGCAAAGTGCCGA
CAGATCTCGCGGAAGAGCTTAGATAGTAGAGTTGGGAAATCCAAAACGGTGGATGTTCCTGAAAAGCCACGAATGAGCTC
AGATGACGTTGACAAGTTTAGGAGGAGAAGATGCTTGGTTTGGTGATCTATGATATGACGTCTGCACAGTTCATGGAGTA
GTTTCCGAACACCATGGAATGGGGATCAAGCAACTGTGTCATACTGTATAGCGAGGAACAACGCCGACAGTTCCCGCAGT
AGAGGG-ATAATAGCTGTG-TTAAATGTGGGAGAAGAAGAATGAGGACGCTGGTGAATAAGCTGTTATTTATC-AAAGAG
GGTACGTCTCAACATGGTAACTTTCTCGGTTAATTAACCTGTATTGCAACCCCCAGTGGTGGTAGGATTTCCATCATGTA
AAAGTGTACCGTGTTATTGTCTGTAATCACGAGGGACAAGGATAGAACATTTGTGGCCACTTTGCGGCGCAGTCTAAAGT
CTTGGAGCAATCACAAGAAGCAACATATTCTAGTCTGGATATGCAAATATAGTGTTCATATGTTTTGTGGCTTGAAAGGA
ACTTTCCATTCGTTGCGTCTTTCTGCAC-TTCATGTGTGTACACTGTACTGTATGTTACTTAGAATCTGACTGTTGGGGC
TGCAGAATAGACATAACTCAAGATCAGGTGAATCCCAAATGGTAAAAACCTATGTAATCATATGCATCATATAACCAGTT
CAGCACACCACTCCAGCGTACGTACGTAGTATGTACAGTACTGTCTCTACCGTGGCAGTTTAAAAAAACAAGCACATATT
TACATCAGCTGGAAGGGGGAAAAAAAGGAATCGTCGGATCGCTC---ATACACGGCAAGCAAATCTCTCAATAGTGATAA
AATAAAAACTCGGCCGGCCGCAAACACTGATCTACTAAT-CTACTACTGGCTGGTGTTAGGGGTGGTGTTCCTGCTGTCC
CAGGGAGCGTGCACCGTGTTGGGAGAGAAGGGCTCGGCGAAGTCCTTCTTGCCTTTGCCTCCACCGTCTTTGTGACCCAG
GCAGTCATCCTGGATGGCCCTGAGCACGTCCAGCACCTCCCTGATCGGCGGGCGCATCTCGCCGTTCTGCTGCAGGCACC
GGAACGCCAGCTCCGCCACCATGGTCATCATCTTCCTCGCCGCCGGGTCCGACTCGTAGCCGAGCTCCACGTCCACCAGC
TCCTCCAGCCGGCACTTCTGGATCTTGCTGATGGCCATGCCGGCCAGGTTGATCTCGTTCCTCTGCCGGGTGATGTCCAC
GGCGGGCTTGGACGAGATGAGCTCCACCAGCACCACGCCGAAGCTGT
>chr3D_8
-------GCTGTGCACATGGATCAAATCAAAAGCGAACAAGGAGGAAACGGACG------GAGACCCCCGTCCACCGATT
GGACTTTCCCCCACCGATCCCTATCCAACCGGCAGGAGGGAAAGGATGGATTGTTGCGTCCGGCGCACTCTCACTCTGGG
ACGGACGGGTTCACCCGTCGGCGCATCGTGT----GTGCCTGGGCTCGCGTGTCGTGCGGGGCGTCGTGCCTGCTCGTTC
T----GTACATG--TGTAGGTTTATTATACTTTTGCTCGAGCTGTGCTAATC-AAGTGTAGGAGACACTCCAAGCTCGAG
TCGAGTACATGACCCGCACTGGCGAAGCGCAGCC------AGAGGGAAAGATGAACGAGTTCTTTAGAAAAGGAACCATA
CAGCTTGTCATGTACTGGTATGCTGCAATCGTCACCCCTTTACACCCCCCATCCCAAAGACACCC-TTTTCTTTTATCGG
GAAACTAAAAAGGGAACCAACCTCGCCACGTTCTCTCCTTCAGCATAC----------ATAGCTGGACTCCTAGTTCTCT
TCGCCTAGCCTAAACCAT--------------------------------------------------------------
--------TTTGATTAGTAAAAGAGAAAGAA--GGGAGAAATCTTTCACTAGTTGGCCACCCACCA--------TAGACC
GACTAGTCCACA---ACGACGACCGCAGAATCGGCCACGGCAGCCGGCGGCCTCAGCCGATCCGCCACACTCCGGTAGTC
CGGGTGAGTCCAACCGCTTCGCTCCTTTCGCTAAATC-----TAAAGGAAACCCCGAGCTAAATCCAACACTAGAATTAA
GCACAC-------------------------------------------TCGCCACGAAAAGTACGCACCAGCGAGTGAG
CTCCCACCTCCCTCCCCTCCCCCTCCTCTCTGCTCCCACCACGCCACCACCACAACCA-----------------CCAAA
CCCTCCGATCCAAACCCTCCTCCACTTCGCATGCCGCCGCGCCCCCCGAGGCGGCGGCGCAGCTGAC-----CCCACCGC
CGCTCCCGGAGCCCGCCGACATGGGCGGGGTGACGTCCACCATCGCCGCGCGCTTCGCCTTCTTCCCGCCCACGCCGCCC
TCCTACACGGTCGTCGCCGACGCCGCCACCGGCCGCCTCCTCATCCCCGAGATCTCCCGGCCCCCCGCGCGCCGCCGGAG
GCGGGACGGCGGCGGGGACTCCTC------------CGCCGCCGCCGAGGAGGAGGACGCCACGGAGGTGGTGCGCCTCC
GCACGCGCCGCGGGAACGAGATCGTGGCCGTCTACGTGCGCCACGCGCGGGCCTCCGCCACGCTGCTCTACTCCCACGGC
AACGCCGCCGACCTCGGCCAGATGTACGGCCTCTTCGTCGAGCTCAGCCGCCGCCTCCGCGTCAACATTTTCGGGTAATG
CGACCCTCCCCCCGCCGCACTTCGCTTCATTGTTGCTGCTACTACTTCTTCTAAGCCGGACTAGCGTGCGGGTGAGAAGG
TTTCCATTCGGGGAAACTTCCGGGAGACGTTTGGGGAAGTTGCGTACTGGGTAGTAGGAGTA-----ATATGGATATTTG
GTGTGCATTTATTAGTAGTATTAGATTCCGTGTGCCTATTTATGATTGGTTGCTGCAATTTTGCAA-AGGGGGTTTTCTC
TATTTTTTTCGTGGTAAATTAGCGAAAGATCATCTTATTTAGGTAGAGT-ACTTCACTGCTGCAGATCGTCTTGGACTCA
AATTTTTGAATTGCACACAAGATAAGGAAAAAGAACCTAGTTCCTAGTATTAGCTGCGGATGAAATTCAGCTGTATTTGC
TGGTAGCAAGTTGCTACGTTTCCCCGTTCCAGTTAGTTACTGTTTAGCACTATATAATCTGTCCAGCCATGAAAATTATC
ATTGTATTGCTGTCCAACATGGCGACACCCTCAAGGTTTATTTGGTTCTTGCTTTTGGTGTTATAAGGGACACACCATAT
CAGTCCATTAGTTAAGAAAACCTCGACCTGATTTCTAGGATTAGATGGATTTCAGAGTACATGAGCGGTTGCCTAGTAGG
TGTGCTGTATATGCTACAGCATAAACTCTGTAACTTAAGTTTAAT--------AGTTCCAGGCTATCTCTTGTTAGCTAT
ACCATTATACGCTAAGAATGGGGCCATAGTACTGTGCCCGACATTGTGGGCGTCCTGAAAGAAATAAGATAATGTATTTT
GTGGAGGTAGCTTGGATCTGACACAAGAAACTTTTCGAATGATGAGGA-------TGTTGTATTTCGAGGCATAAGTAGT
GGGTCTGTCTGCTGGATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACACACA
CGTTATGGGTTGCCCTTTACGCTCGTGAGTTAGTACCCTACACGAGAATATGTTTTCCTCCTGATATCCATCTTAATAGA
CCCCG--TACGTGTTGCAGGTATGATTATGCTGGTTATGGAAGGTCTACAGGGAAGGTATATTTGTGTTTGCTCTGTTTC
ATCTTTAACTTACATAGCAATGCCAATCTTCTATGCAAGCATATCTTAATGGACAATTTATTCTTCCATTGAACAGCCCA
CTGAGTATAATACATATGCAGACATTGAAGCAGCATATAACTGCCTCAAGGAAAAATATGGTGTGCCAGATGAGGATATA
ATTTTGTATGGACAATCTGTTGGAAGTGGTCCAACCATTGATCTTGCTTCACGGTTGCCAAATTTGCGAGCTGTGGTTCT
GCACAGTCCTATTTTATCTGGACTGAGAGTGCTATATCCAGTCAAAAAAACTTTTTGGTTTGACATTTACAAGGTAAATT
CGATTTACCC------CCTGCTCCCCAGAGTTGTGGCTGATAAATGGCTGATAT-A-TTTTCCTCAATTTTGTAGAATGT
CGACAAGATCAGCTTGGTAAATTGTCCTGTTCTTGTCATTCATGTAAGTTCTATTAGTTTACCCTACCCTCTTCTTTTTC
AATACTGCCTGCCTCTTGCTATCTTGCATTGCCTCTCTAGTGGGATAAAGGGATTTGTTTTTAGATTTGTAATACCACTA
CATTGAGAAGCTGAAAGATAGATGATTAATTTTTTAATGATCACCAAGCCAAGTATGTAAGAATTAAACGAAAATGAATC
AAATGAACAATCAGATTTCGAAGTTGCTGGGGTGATATAACATCCATCACCCCAGTTTTTACATCAGAATTTCGGTGCTT
CAGTTGT--------CATAACTGAAACAATTATAATACTTATGACAGGGCACGTCGGACGACGTTGTTGATTGGTCCCAT
GGAAAGCAGCTATGGGAGCTTTGCAAGGTGAAACATTCACCTTTGTGGCTAAGTGGCGGTGGGCACTGCAACCTGGAGCT
GTATCCTGACTACATCAGGCACTTGAAGAAGTTCGTGTCAAGCCTCGGCAAAAAATCAACAAAACCTGACTTGAAAGAGT
TACCAGCAACAGAAGACACATCTCGCAAGGACGCAGAATCTGTGTCCTCGGACAAACCCCAAGAAGCTGCGAAGTGCCGA
CAGATCTCCCGGAAGAGCTTAGATAGTAGAGTTGGGAAATCCAAAACAGTGGATGCTCCTGAAAAGCCACGAATGAGCTC
AGATGACGTTGACAAGTTTAGGAGGAGAAGATGCTTGGTTTGGTGATCTATGATATGACGTCTGCACAGTTCATGGAGTA
GTTTCCGAACACCATGGAATGGGATTCAAGCAACTGTGTCATAGTGTATAGCGAGGAACAACGCTGACAGTTCCCGCAGT
AGAGGG-ATAATAGCTGTG-TTAAATGTGGGAGAAGAAGAATCATGACGCTGGTGAATAAGCTGTTATTTATCAAAAGAG
GGTACGTCTCAACATGGTAACTTTCTCGGTTAATTAACCTGTATTGCAACCCCCAGTGGCGGTAGGATTTCCATCATGTA
AAAGTG----------TTGTCTGTAATCACGAGGGACAAGGATAGAACATTTGCTGCCACTTTGTGGCGCGGTCTAAAGT
CTTGGAGCAATCACAAGAAGCAACATATTCTAGTCTGGATATGAAAATATAGTGTTCATATGTTTTGTGGCTTAAAAGGA
ACTTTCCATTCGTTGCGTCTTTCTGCAC-TTCATTTGTGTAC----TACTGTATGTTACTTAGAATCTGACTGCTGGGGC
TGCAGAATAGACAGAACTCAGGATCAGGAGAACACAATATGGTAAAAACCTATGTAATCATATGTATCATATAACCAGTT
CAGCACACCACTCCAATGTACGTATGCAATATGTACAGTACTGTCTCTACTGTGGCAGTTTAAAAAACCAATCACATATT
TACATCACCTGAAAGGGACAAAAAA--GAATCGTCGGATCGCTCCTCATACACGGCAAGCAAATCTCTCAACAGTGATGA
AGT-AAAACTCGGCCGGTCGCAAACACTGACCTAATACTACTACTACTGGCTGGTGTTAGGGGTGGTGGTCGTGCTGTCC
CAGGGAGCGTGCACCGTGTTGGGGGAGAAGGGCTCGGCAAAGTCCTTCTTGCCTTTGCCTCCACCGTCTTTGTGACCCAG
GCATTCGTCCTGGATGGCCCTGAGCACGTCCAGCACCTCCCTGATCGGCGGGCGCATCTCGCCGTTCTGCTGCAGGCACC
GGAACGCCAGCTCCGCCACCATGGTCATCATCTTCCTCGCCGCCGGGTCCGACTCGTAGCCGAGCTCCACGTCCACCAGC
TCCTCCAGCCGGCACTTCTGGATCTTGCTGATGGCCATGCCGGCCAGGTTGATCTCGTTCCTCTGCCGGGTGATGTCCAC
GGCGGGCTTGGACGAGATGAGCTCCACCAGCACCACGCCGAAGCTGT
>SNPs
SSSSS---------------------------------------------------------------------------
--------------------------------------S-------------------------------S---------
----------------------------------------------------S---------------------S-----
------------S------------------------------S------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------S--S--------------
-----------------------------------------S------SSSSSSSSSS----------------------
-------S-------------------S---------S--SS--S--------------S---------S----------
--------------------------------------------------S---------------SSSSSSSS------
--------S--SSSS----------------S------------------------------------------------
--------------------------------------------------------------------------------
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S---S------------
----------------------------------------------------------SSSSSSSSSSSSSSSSS-----
----------------------------------------S---------------------------------------
-S----S---------------------------S---------------------------------------------
--------------------------------------------------------S-----------------------
---S-----------------------S----------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-----------------------S--S-----------------------S-----------------------
----------------S-----------S------------S-------------S----------S------------S
----S------S----------------------------S---SS------------------------S--S------
------S------------------------SS--S------S--------------------------S---------S
--------------------------------------S---S----------S--------------------------
----------------------------------------------------------------------------S---
--------------------S--------S-------SS-----------------------------------------
-------------------------------S----S-------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------S--S--------------S-----------------------------------
----------S-------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S----S--------------------------------
------------------------------------------------------------S---------------S---
-------------S-S-------S------S-------------S-----------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------S-----------------
---------S--------------------S--------------S----------------------------------
------S-S--------------SS--------S-----------S----------S---S-------------------
S-------------------------------------------------------------------------------
------S-------------S---------S----------------S-------------S------------------
---------------S----S---------------------------------------------S-----------S-
------------------S------------------------S-----------------S-----------S--SS--
----S-----------------------S-----------------------------------S--------------S
--------------------------------------------------------------------------------
------------------------------------------------------S--S----------------------
----------S--------------S-----------------S------------S----------------------S
--------------------S-----S-----------------------------------------------------
----------------------------------------------------S---------------------------
-----S--S-------------------------------S----------------------S----------S--S--
------S------------S---------------------------S--------------------------------
------------------------------------------------------S------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
-----S----------------------S---------------------------------------------------
-----------S-------------------------------------------------------------S------
------S---------------------S------------------------------------------S--------
--------------------------------------------S-----------------------------S-----
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
---S--------------------------------------S-------------------------------------
----------------------------------------------------------S--S------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>forward_899
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-------------------------------------------------------------------------------A
GCACACACACACTCTTCCC-------------------------------------------------------------
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>reverse_2256
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---------------CAATGGGGCCATGGTACTGT---------------------------------------------
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>forward_901
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-CACACACACACTCTTCCCCT-----------------------------------------------------------
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>reverse_3287
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------GCACCCTCCTCATCAGAGTT------------------------------------------------------
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>forward_3183
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-------------------------------------------TTGCTTCACGGTTGCCAAAC-----------------
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>reverse_4714
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-------------------------------------------------------------------------CCCAGTT
CAGCACTCCACTC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
