>input_sequence_27581
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------ATTTCCGTCGCCCTTC--TTTTAACAAGCAAACCCTCCACGGTGTTTTTATTTTCACCTCCTCACCACACAATC
CCCTTCTCCGTCTTCCTGCGGATTCTCT-GCCAGCTTCCGG-------CCGCTCCCCGCCTCCTCCGGCGGTAATGGTTG
CTCGCCTGCCA-CCCTTTAATTCTCTGTCACTTTAGTTAGTTCCGGTTTAACGGATTGATTATCTGTGTCTGTCCGATCC
GGCATGTGGAGTATTT-GGCTGTTTGGGGTTGGGATTTCTGGTCTCTGGAAGAATCTTCAGTTC----------------
--CGTGTCCTTTCCAAGATTTTTACCAAGCTGGGTTGTCGGCGGTCCAGAAATGGCCGAATTTGTGCGTGGGCCATCTAT
GAGCTACTGATTTATACAACTTGATGCATGATGTCCATCTTGGTTATGCATATCCTAGTATAATACTCCCTCTGTAAACT
TTAGTGATCTAAATGCTCTTATATTTCTTTACGGAGGGAGTACTAAGCAATCACTAGGTGTGGCGCAGTAATGTACAGTC
GTCATCTGGTTTAGCACCACATCAACATGGCAATCCATA-TATTATGATGGAGCAGTATGTTA--GAGTGTTGCGCTAGC
TTGTAAAATTTCAACTTTAAATTCAGTATGTTGTTAGGAGGAATAGAGAGGATCATTCTGTT--GTACGGCACTAGCAAT
TTTCTGTTGTAATTTCCTACCAAGATATAACGGATTTGGAGCCCTGAGGCCTTATCCG-TGGCTGATCAAAGCATTCTCT
GATGTAGA-------------------CTGAAATTCCCTCCTGTTGCTGGAGAAATGCGTGAGCAGCTTGCCGCAGCTTG
ATGAGCGTCCAGCCATGCCGACGCTACATGGTCCTCTTCTGTTCGTGAATCCTGGAGCTTACCAAGAGCCGAAATCATTC
CCGAAAAGCACCGCCAGTCCATTTAACAACTTGTTAGGCTGCAATACGGTTTGTAGTTCCGTCGAAGGCCATCATGTACA
GAAGCCACACATTGTTTCTAGCTTCAGAGTTAACTTTACCAGAGTCAGCCATTATCTTCAGAGAAGCTTAAATGAGAGAA
CTACACGGCACTGGCTGGTACGGTATGCTTTTCCACTGACCTCCTATTTTTCTGAATACTCAATCACAATTTGTTTACGT
TTGAACCATTGTGTTGGGCGCAGCATCGATTTCATGTTAATGCTTCATCGGACGAGGACTTTCGCTCGTCGCGTAATATA
GCAACCAGCCTATTCAAGCAGTATAAGAATGTCATTGATCGAGGAGGCGGAGATAACATAAAAGTAATGT----------
TTCTTGTTGAGATTCTTCACTGGTGTTCTTGACATATTTTCTGTCTGTAATCATTATGTCGCCTTTTAATGTTT-GCAGG
GGTTTGTTAGTGCTGGAGTGCAAGCATATGCCCTAGGCTGTACAGAAGAGGGGCTTAGAAAGGAACTTATGGATATAAAA
AAATCTGGTGTCAAGATCGAAGGCCTGCAATCCTATGGAGGAACAAGCTTGAGCTTCAAAGTTCGTTCTTTTGAGGTTAG
CATGTTCAAATATA---TAAATTAGTCTGCTTCAGTTTACA-ACTACAGTATCTTTTATCTTCTTATGTCTTGCATTGCA
ACTATGCTCTGCTCTGTAGTATTCACAGTTTTACACTCAAACCAATGAGTTTGCTTTGCTCTATTTCTTTTGAGAAGAGC
ATGCCTTTTACTTTCTTCTGAATCTGATAATGACTGTCGGTAGATTAAGTCTGATAAGTCACACTGACAAGATAT--GGA
GTTTGATATATGGTATCATCTAGCCCCGTAGAGGACA-TGTTCATTGTGCCAAGACCCTTGACGAGATCTTCGGGAGTTT
CGTTTCCATTCATCTCAAGTCTCAACGATGAATTTTTCATG---AACCATAGGTAAAGGAGTGCATTCTGTGGCTCAGTA
TAGTGTTCATTACAATCCTATGCACGCCACAGCCGACGGTCATCAGGTGGTCTACCACCCCACCAGTGTCGGCGGATGTC
TTGCATCAGTGGAAAGGATTTTGTGCCCTGATAGCAAACGCTTACTACACCAAAGGCATGGCATGGTAAGAAAGTTTTAT
CTGTCAACA-TTTTCTTC--TTTCATCCTATAATATCCTCTATATTATATAGCA-------CTCTGTCCCGTAATGTAAG
ACGCCTTTGGACACTACACTAGTGTCAAAAAAACGTCTGAAATTATGGAACGGAGGGAGTACTACTTACCACTGATCGAA
TCAAACGCGGACGAAACTTCGACACAGGCTGCCAGTGAAAACATTGCAGCTGGAACAGATGGCTGTGACAGGCAGTTCAG
AGGAGCCATCGCTAGTAGCAAGTCGGATGCAGCTAGTTTTCAGTACGTTAGAGGTTCGTAGCAGCAATCATCGAATCTCT
GGAAACTAGTCAAATGAAATCAGATCCTCATTGGTTTGCCTGGTTATTATTTTAACTCTGCAGGTAGTCAGCCCCCAATG
GCCAAGAGTGTGATGGAAGGAAGAGCAAGCAATATGATCATACAAAGGCCTGCAAGTTTACAGAACCCATGCCTCATCCA
AAGCCAGGGACGAATCTTCTTTCTCTAATGTGAATGTACTGAAGAAACAGGTCTATTGTACTGAAGATTGTGAAA----T
ATTTGGTAAATACATGTATATAGAACCCACAGCTGCTGTAAATCTTCGTCTTCAGCTACGATATAATGGAACCGGACATG
TATGTGCTTGCTACACCTTTGTGGTTCGCACACTTTTC-GCCGT---------------------GAATTCCTCAAGAAT
TTCTCTTGGTCTTTCTGGCGTTATGATTTTAGCGCCAGCAGATTACTT--------------------------------
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------------
>chr5D_1_TraesCS5D01G393000
CCCCTCCGCTCTAGGCGTTATACGGACTATTCATGTTTCTTTGTATTTTGCTTTTTTTATTGTTTGTTTGTGCAAGAGGA
CCTTGTTTGGCTATGTGCATCTAAGTTATGCAGAGACCGGGTGTAATGCTTAAATCTTTTAAGTAATAAAGCGTCCCTTT
TGAAAAAAG---GTCGTCTATAAGTGTCCTATATGGGGTTTGTAATTTAAGTTTTTACTCGGTTTTTCTCTAATTAACCG
GACCACTCTCTTATC-TTTTGCCTCATTTCAAATAAAAGCATTGCAAAAATAAAAACGCTAGTACAGAAAATATGATCCT
GTATTGTTTGTGGTGTGCTCAATCTTTTATTTTAGATGTAAACAAAGATAAAGCAGCGAGCTAGTTTAGTTAATTGCAAG
TTTATTTTTAAAGGTTACGGATCAAACACTAACGCAGATTGGTTAGATAAGTTTTCAAACTCTCTTGATCAGGGGCGGCA
CCTTTGGTTGATCCAT-CATGATCCCCTTTTATACCACTTTATGTGGACTACAATTAATAAAGTTTAGTTATACCCTAAA
AGAACAAATGATAAGTGTTACATGTGTGGCACGAAGTAACACCGTCCTGACGTTTTTATTTATAACTAAAATTGTCATTA
AAAAACCCCAAAAAAACTGAAACTTACCATCCAAACAGAAAGTTGCCATGCT----AACTAAAGTTGCCATCTTCGGGCA
ACTA----------AATTTGATATCAAACAACGTCAGACTGAAATTGCTTCATGCCACACGCGTCGCACTTATCAACGTA
AAGAAAATGTAAACGGAGGTTTTTTTGTTGTTGT--GGAGAACATCCAAACGGATTTATTCGTGGACCAACAAATAGCA-
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------------------------TCTCCTGGGCTACGAACGGGCCACGACTAAAAACAGATTCATCGAGGGCGATGGGC
TGCTCTCCGCGGGGTCCACGTCGCCGCTCGCCTCGCCAGTCGTTTTTTCTCGTGGCCCCTGAATTTTCCCCTCCCTTCTC
CGCAGCATTTCCGTCGCCCTTC--TTTTAACAAGCAAACCCTCCACGGTGTTTTTATTTTCACCTCCTCACCACACAATC
CCCTTCTCCGTCTTCCTGCGGATTCTCT-GCCAGCTTCCGG-------CCGCTCCCCGCCTCCTCCGGCGGTAATGGTTG
CTCGCCTGCCA-CCCTTTAATTCTCTGTCACTTTAGTTAGTTCCGGTTTAACGGATTGATTATCTGTGTCTGTCCGATCC
GGCATGTGGAGTATTT-GGCTGTTTGGGGTTGGGATTTCTGGTCTCTGGAAGAATCTTCAGTTC----------------
--CGTGTCCTTTCCAAGATTTTTACCAAGCTGGGTTGTCGGCGGTCCAGAAATGGCCGAATTTGTGCGTGGGCCATCTAT
GAGCTACTGATTTATACAACTTGATGCATGATGTCCATCTTGGTTATGCATATCCTAGTATAATACTCCCTCTGTAAACT
TTAGTGATCTAAATGCTCTTATATTTCTTTACGGAGGGAGTACTAAGCAATCACTAGGTGTGGCGCAGTAATGTACAGTC
GTCATCTGGTTTAGCACCACATCAACATGGCAATCCATA-TATTATGATGGAGCAGTATGTTA--GAGTGTTGCGCTAGC
TTGTAAAATTTCAACTTTAAATTCAGTATGTTGTTAGGAGGAATAGAGAGGATCATTCTGTT--GTACGGCACTAGCAAT
TTTCTGTTGTAATTTCCTACCAAGATATAACGGATTTGGAGCCCTGAGGCCTTATCCG-TGGCTGATCAAAGCATTCTCT
GATGTAGA-------------------CTGAAATTCCCTCCTGTTGCTGGAGAAATGCGTGAGCAGCTTGCCGCAGCTTG
ATGAGCGTCCAGCCATGCCGACGCTACATGGTCCTCTTCTGTTCGTGAATCCTGGAGCTTACCAAGAGCCGAAATCATTC
CCGAAAAGCACCGCCAGTCCATTTAACAACTTGTTAGGCTGCAATACGGTTTGTAGTTCCGTCGAAGGCCATCATGTACA
GAAGCCACACATTGTTTCTAGCTTCAGAGTTAACTTTACCAGAGTCAGCCATTATCTTCAGAGAAGCTTAAATGAGAGAA
CTACACGGCACTGGCTGGTACGGTATGCTTTTCCACTGACCTCCTATTTTTCTGAATACTCAATCACAATTTGTTTACGT
TTGAACCATTGTGTTGGGCGCAGCATCGATTTCATGTTAATGCTTCATCGGACGAGGACTTTCGCTCGTCGCGTAATATA
GCAACCAGCCTATTCAAGCAGTATAAGAATGTCATTGATCGAGGAGGCGGAGATAACATAAAAGTAATGT----------
TTCTTGTTGAGATTCTTCACTGGTGTTCTTGACATATTTTCTGTCTGTAATCATTATGTCGCCTTTTAATGTTT-GCAGG
GGTTTGTTAGTGCTGGAGTGCAAGCATATGCCCTAGGCTGTACAGAAGAGGGGCTTAGAAAGGAACTTATGGATATAAAA
AAATCTGGTGTCAAGATCGAAGGCCTGCAATCCTATGGAGGAACAAGCTTGAGCTTCAAAGTTCGTTCTTTTGAGGTTAG
CATGTTCAAATATA---TAAATTAGTCTGCTTCAGTTTACA-ACTACAGTATCTTTTATCTTCTTATGTCTTGCATTGCA
ACTATGCTCTGCTCTGTAGTATTCACAGTTTTACACTCAAACCAATGAGTTTGCTTTGCTCTATTTCTTTTGAGAAGAGC
ATGCCTTTTACTTTCTTCTGAATCTGATAATGACTGTCGGTAGATTAAGTCTGATAAGTCACACTGACAAGATAT--GGA
GTTTGATATATGGTATCATCTAGCCCCGTAGAGGACA-TGTTCATTGTGCCAAGACCCTTGACGAGATCTTCGGGAGTTT
CGTTTCCATTCATCTCAAGTCTCAACGATGAATTTTTCATG---AACCATAGGTAAAGGAGTGCATTCTGTGGCTCAGTA
TAGTGTTCATTACAATCCTATGCACGCCACAGCCGACGGTCATCAGGTGGTCTACCACCCCACCAGTGTCGGCGGATGTC
TTGCATCAGTGGAAAGGATTTTGTGCCCTGATAGCAAACGCTTACTACACCAAAGGCATGGCATGGTAAGAAAGTTTTAT
CTGTCAACA-TTTTCTTC--TTTCATCCTATAATATCCTCTATATTATATAGCA-------CTCTGTCCCGTAATGTAAG
ACGCCTTTGGACACTACACTAGTGTCAAAAAAACGTCTGAAATTATGGAACGGAGGGAGTACTACTTACCACTGATCGAA
TCAAACGCGGACGAAACTTCGACACAGGCTGCCAGTGAAAACATTGCAGCTGGAACAGATGGCTGTGACAGGCAGTTCAG
AGGAGCCATCGCTAGTAGCAAGTCGGATGCAGCTAGTTTTCAGTACGTTAGAGGTTCGTAGCAGCAATCATCGAATCTCT
GGAAACTAGTCAAATGAAATCAGATCCTCATTGGTTTGCCTGGTTATTATTTTAACTCTGCAGGTAGTCAGCCCCCAATG
GCCAAGAGTGTGATGGAAGGAAGAGCAAGCAATATGATCATACAAAGGCCTGCAAGTTTACAGAACCCATGCCTCATCCA
AAGCCAGGGACGAATCTTCTTTCTCTAATGTGAATGTACTGAAGAAACAGGTCTATTGTACTGAAGATTGTGAAA----T
ATTTGGTAAATACATGTATATAGAACCCACAGCTGCTGTAAATCTTCGTCTTCAGCTACGATATAATGGAACCGGACATG
TATGTGCTTGCTACACCTTTGTGGTTCGCACACTTTTC-GCCGT---------------------GAATTCCTCAAGAAT
TTCTCTTGGTCTTTCTGGCGTTATGATTTTAGCGCCAGCAGATTACTTCATTTCTCCTTTTGTACTCTCTTCATTTCTTT
TTAGTTTGCATATAAGATTTGGTTAAAGTCAAACTTTGTTAACTTTGACTAAGTTTATAAAAAAATATATCAAGACTCAC
AATATAGAATCAATACTTTTAGGTGCATCATGAAATTAATTTTCATACATATAGCGTTAGTATTGTAGATGTTGATATTT
TTTCCTATAAAGTAGGTCAAACTTTACAAAGTTTGACTTCGACCAAATCTTATATGCAAACTAAAAAGAAACGGAGGGAG
TACAAAACAAATGGGTTCACAATACTTGCTACTGTCATTGGATTTCTAACTATTAGGCTCCGTTCGGTATGGAGGAAGAG
AAAACGAAGGAAAAAACGACGTCACAGGAACAAGGTTTGATGAACAGTACAAACATATGGAATCTGAAAACGTAGGAACC
AGGAAGCGTGTTGGCTGTTTTACAAACAACAATGTCCTTCTGTCTTGCAAAGTTTCACTTGCATGTAGTGT-ACCGTTCA
CAAAAGAGGAGCAATAAATACCCATGAAATTTTGACACTGTAAACAGAGTTTACAACAAAATTTTCCTCCATACCCAGTA
CCACCCATGATATTACCAAGCTTTTCGGCATCCTAG--ACACAAATCACAC-CCCCATGAGGCTTAGCTAGATCATCGCA
ATTTCATTGCAAGCCATTAGCCCATTCCCTGTCCCTGGACCAAGACGTGATAGAATAAAAGAGAGAACAAGAACTTTGTA
CCAGGATTTACAAACTTCATAGCACATCATCGATACTCTCGACACCCTTTTTTTCCCTTTCAATATGATGAAGACTCTGA
GGATTAATTATGTATCTATGTCCCACAAGTGCCCTTCACATTTCACGATAGTTGCTGCTAAAGGTACATGGTGATATAAA
TTAAAGAGTGTATTTTTAGACTAACACCAAAAAAAAGGAGTGAAAAGCTACAATATGACATAAAACATTCCCTGTTGGAG
CCACCTGCTGCT
>chr5A_1
CCCCTCCACTCTAGGCGTTATACGAACTCTTCATGTTTGTTTGTATTTC-GTCTTTTTATTTTTTGTTTGTGTGAGAGAA
CCTTGTTTGGTCGTGTGCATTTTAGTTATACAGAAGCCGGATGTAATGCTTAA-------------TAAAGCACCTTTTT
TTGAAAAAGAAAGTCATCCGTGAGTGTTTCATGTGAGGTTTGTAATTTAAGCGTTTACCCTGTTTTTCTCTAATTAATCG
AACAACTCTCTTATTTTTTTGCCTTGTTTCAAATAAAAGCATTGCGAAAATAAAGATGCTAGTACAGAAAACATGATCCT
GGATTGTCTATGGTGTGCTCAACCTTTTATTTTAGATGTAAACAAAGATAAAGCAGCGAGCTAATTTAGTTAATTACAAG
TTTATTTTTGAAGGTCGCGGATCAAACACTTATGCAGATAGATTAATTAAGTTTTCAAACTCTCTTGATCAGGGGCGGCA
CCTTTGGTTGATTCATTCCCATGATTCTTTGGTTGA--TTCATGTGGACCATGATCAATAAAGCTTAGAGATACCTAAAA
TATTTAAATAATAAGTTTCACACGAGTGGCATAAAGTAACACTGCCCTAATATT----TTTATAACTAAAATTGCCATAA
AAACCAA--AAAAAAGCTAAAACTTGTCATCCAAATAGAAAGTTGTCATGCTTCACAACTAAAGTTGCCATCCTCGCATA
GCTAAAGTTTTCATA----------AAAAAACATCAGGACGAAATTGCTTCATGTCACACGTGTGACACTTATCAGGGT-
AAAAAAATGTAAAGGGAG-TTTTTTTGTTGTTGT--TGAGAACATCCAAACGGATTTATTCATGGACTAACAAAGAGCAT
TTCATGTCGAAATCACTAATTAAGGAGTACTCGTTGCAAAGAACACTTCACTTTCCCAGGTCGCGACAAGTGGTGCACAT
GCAGCGCGCCATTTGTCGCAACCTGAAAATTTTCCCTTTTTTCGTAGATCTGTTTATTCAAAACGTTTTATCTCTTAAAC
CGTGCGTCCAAATCTCGAACCGTTTTCACCATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCTCATGTTGATAGG
TTTTGACAAACTTTTTTTTCACAAAAAAACCGGACGAAAAAACCGAACCGGGAGCATAGTTGTTTTCCCTTTCCGAAAGA
GGCACACCCGTGCCTCTCGCGAAATCACAACCGTACCTCTCGTGGAAGCAAAACCGTGACTCCCGTGGAAGGAAAAAAAC
AGAAAACGCGTTTTTTTCCGTTTTCGAGAGGCACAACCGTGACTCTCGCGAAAGCACAACCGTGACTCTCGCGAAAGCAC
AACCGTGACTCTCGCGAAAGCACAACCGTGACTCGTGAAAGAAAAAAAACAGAAAACGCGTATTTTTTCCCTTTCCGAGA
GGCACGACCATGACTTTCGCGTAAGCACAACCATGCCTCTCGCGGAAGCAAAACCGTGACTCTCACGAAAGAAAAAAAAA
TAAAAAACACGTTTTGTTTTTCCCTTTCCGAGAGGCACGGCCGTGACTCTCACAAAGCACAACCGTGCCTCTCGCGGAAA
AAAACCGTGGCTCTCGCAAAAGAAAAAAAAACAGAAAATGTGTTTTTTTTCGTTTTCGAAAGGCACGGCCGTGACTCTCG
ATAAAGCACAACCGTGCCTCTCGCGGAAAAAAAACCGTGACTTTTACGAAAGAAAAAAAAGAAAACGCGTTTTTTCGCGC
AAAAAAAATTCAAAATTTTTTTGATCAAAAAGCTAAGAAAGACCGGGCGAAAACCAAAATGTCCAAAAAAATCGGAAAAA
AACCCGTTTAAAAAGCCAAAAACGCGTGTAGAAAAATAAAAAAACAAAATTCAAAGGAAGCATCCAGAGCGCGACACGTG
GCGAATGTCTGAGAATACGTCAAGTGACGCTGATCGTTGCGAGGCTTCCGAAGGAGCGCTCGTTAACTAGTTGCTCCCAT
CTCATGTCCCTAAAAAAAAGAGCTTCTCATGGGCTACGAACGGGCCACGACTAAAAACAGATTCAGCGAGAGCGATGGGC
TGCTCTCCGCGGGGTCCACGTCGCCGCTCGCCTCGCCAGTCGTTTTTTCTCGTGGCCCCTGAATTTTCCCCTCCCTTCTC
CGCAGCATTTCCGTCGCCCTTC--TTTTAACCAGCAAACCCTCCACGGTGTTTTTATTTTCACCTCCTCACCACACAATC
CCCTTCTCCGTCTTCCCGCGGATTCTCAGGCCAGCTTCCGG-------TCGCTCCCCGCCTCCTCCGGCGGTAATGGTTG
CTCGCCTGCCC-CGCTTTAATTCTCTGTCATTTTAGTTAGTTCCGGTTGAACGGATTGATTATCTGTATCTGTCCGATCC
GGCATGTTGAGTATTT-GGCTGTCTGGGGTTGGGATTTCT--------------------GTTC----------------
--CGTGTCCTTTCCAAGATTTTCACTAGGCTGGGTTGTCGACTGTCCAGAAATGGCCGGATTTGTGCGTGGACCTTTCAT
GAGCTACT---------------------------------GGTTATGCATATCCTACTATAATG---------------
------------------------------------------CTAAGCAATCACTAGGTGTGACGCAGTAATGTAA--TC
GACATCTGGTTTAGCACCAGATCGACAGGGCAATTCATATTATTACGATGAAGCAGTATGTTA--GAGTGTTGCAGTAGC
TTGTAAAATTTCGACTTTAAATTCAGTAATC-GTTGGAAGAAATAGAGAGGGTTTCTGTGAGTACTAGCAGTTATTT---
----TGTTGCAATTTCCTAGGAAGATATAGTAGTTTTGGAGCCCTGAGCACCTGTCTCTTGGCTGACCAAATCATTCTCT
ATTGTAGATTTGAGTTACCCGCGGCTTCTGAAATCTTCTCCTGTTGCTGGAGAAATGCGTGAGCAGCTTGCCGCAGCTTG
ATGAGCGTTCAGCCATGCCGACGCTACACGGACCCGTTCTGTTCGTCAGGCCCGGTGCTTACCAAGAGCTGAAACCGTTC
CCGAAAAACGCCGCTGGTTCGTGTAGCAATTTATTGGGTTGCAACACAATTTGTAGTTCCGTCGAAGACCATCATGTACA
GAAACCACACATTGTTTCCAGCTTCAGAGTTAACTTTACCAGAGTCAGCCATTATCTTCAGAGAAGCTTAAATGAGAGAA
CTACACGGCACTGGCTGGTACGGTATGCTTTTCCACTGACCACCTATTCTTCTCAAAACTCAATCACTATTTGTTTACGT
TCGAACGATTGTGTTGGGCGCAGCATCGGTTTCATGTTAATGCTTCATCGGACGAGGACTTCCGCTCGTCGCGTAATATA
GCAACCAGCCTGTTCAAGCAGTATAAGAATGTCATTGATCGAGGAGGTGGAGATAACATAAAAGTATTGGTTCTTGTTGG
TTCTTGTTGAGATTCTTCACTGGTGTTCTTGACATACCTTCTGTCTGTAATCATTATGTCGCCTTTTAATGTTTTGCAGG
GGTTTGTTAGTGCTGGGGTGCAAGCATATGCCCTAGGCTGTACAGAAGAGGGGCTTAGAAAGGAACTTATGGATATAAAA
AATTCTGGTGTCAAGATCGAAGGCCTGCAATCCTATGGAGGAACAAGCTTGAGCTTCAAAGTTCGTTCTTTTGAGGTTAG
CATGCTCAAATATA---TAAATTAGTCTGCTTCAGCTTTTTCACTACAGTATCTTTTATCTTCATATGTCTTGCATTGCA
ACTATGCTCTGCTCTGAAGTATTCACAGTTTTACACTCAAACCAATGAGCTTGCTTTGATCCATTCCGTCACCATGTC--
------TTTACTTTCTTCTGAATCTTTTAATGACTGTCGGTAGATGAAGTCCGATAAGTGACATTGGCAAGATATATGAA
GTTTGACATATGGTATCATATAGCCCAGTAGAGGACATTGTTCATTGTGCAAAAACCCTTGACGAGATCTTCGGGCATTT
CGTTTCCATTCGTCTCAAGTCTCAACGATGATTTTTTTTTCATTAACCATAGGTAAAGGAGTGCATCCTGTGGCTCAGTA
TAGTGTTCATTACAATCTTGTGCACGCCACAGCCGACGGTCATCAGGTGGTCTACCACCCCACCGGTGTCGGCGGATGTC
TTGCATCAGTGGAAAGGATTTTGTGCCCTGATAGCAAACGCTTACTACACCAAGGGCATGGCATGGTAAGAATGTTTTAT
CTGTCGATGCTTTCTTTC--TTTTATCTTATAATATCCTATACAGTATTATATACTACTCCCTCTGTCCCTTAATATAAG
ATGTTTTTGCAGTTCAATTTGAACTGC-AAAAACGTCTTATATTAAGGGGCAAAGGTAGTACTCACT---ACTGATCAAA
TCCAACGCGGACGAAACTTCGACGCAGGCTACCAGTGAAAACATTGCAGCTGGAACAGATGGCTGTGACAGGCAGTTCGG
AGGAGCCATCGCTAGTAGCAAGTCGGATGCAGTTAGTTTTCAGTACATTAGAGGTTCGTAGCAGCAATCATTGAATCTCT
GGAAACTAGTCAAGTGAAATTACATCCTCACTGGTTTGCCTGGTTCTTGTTC-AACTCTGTAGGTAGTCAGCCCCCAATG
GCCAAGAGTGTGATGGAGGGAAGAGCAAGCAATATGATCATACAAAGGCCTGCAAGTCTACAGAACCCATGCCACATCCA
AAGCCAGGGACGATTCTTCTTTCTCTAATGTGAATGTACTGAAGAAACAGGTCTATTGCACTGAAGATTGTGAAA----T
ATTTGGTAAATACATGTATATAGAACCCACAGCTGCTGTAAATCTTCGTCTTCAGCTACGATATAATGGAACCGAACATG
TATGTGACTGCTACACCTCTCTGGTTCGCACACTTTTTTGCCGTTTAGTTTGCTAGACATGCGTCGAATTCCTCAAGAAT
TTGTCTTGGTCTTTCTGGCGTTATGATTTTAGCGCTAGCAGATTACTTCACTTCTCCTTTTGTAC---------------
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---AAAACAAATGGGCTCACAATACTTACTACTGTCATTGGATTTCTAACTATTAG------------------------
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------CACGTTAGCTGTTTTACAAACAACA---------TGTCTTGTAAAGTTTCATTTGCGTGTAGTGT-ACCTTTCA
CAAAAGAGAAGCAATAAATACCCAGGACATTTTGACACTGTAAACAGAGTTTAC--------------------------
-CATCCATGATATTTCGAAGCTTTTTGGCATAATGG--ACACAAAAATCACACCCCATGAGGCTCAGCTAGATCAACGCA
GTTTCATCGCAAGCCATTAGCCCATTCCCTGCCCCTGGACCAAGACATGATAGAAT--AAGAGAGAACCAGAACTTTATA
CCAGGATTTACAAACTTCATAGCACATCATCGGTACTCTCGACACCCTTTTTTTCCCTTTCAATATGATGAAGACTCTGA
GGATTAATTATGTATCTATGTCCCACAAGTGCCCTTCACATTTCACGATAGTTGCTGCTAAAGGTACATGGTGATATAAA
TTAAAGAGT--ATTTTCAGACTAACACCAAAAAAAAGGGGTGAAAAGCTACAATATGACATAAAACATTCCCTGTTGGAG
CCACCTGCTGCT
>chr5B_1
CCCCTCCGCTCTAGGCGTTATA-GGACTATTCATGTTTCTTTGTATTTTGGTTTTTTTATTTTTTGTTTGTGTAAGAGGA
CCTTGTTTGGCTATGTGCATCTAAGTTATGCAGAGACCACGTGTAATGCTTAAATCTTTTAAGTAATAGAGCGTCCCTTT
TGGAAAAAG--AGTCATCAATGAGTGTCCCATATGGGGTTTGTAATTTAAGTTTTTACCCAGTTTTTCTCTAATTAACCG
GACAACTCTCTTATC-TTTTGCCTCATTTCGAATAAAAGCATTGCAAAAATAAAGACGCTAGTACAGAAAATATGATCAT
GTATTGTCTATGGTGTGCTCAATCTTTTATTTTAGATGTAAACAAACATAAAGCAACGAGCTAGTTTAGTTAATCGCAAG
TTTATTTTTAAAGTTTATGAATCAAACACTGATGCAGATTGGTTAGATAAGTTTTCAAACTCTCTTGATCAGGGGCGGCA
CCTTTGGTTGATCCATCCATGATCCCCTTTTATACCACTTCATGTGGACTATGATCAATAAATTTCAGTTATACCCTAAA
AAAACAAATGATAAGTGTCACATATGTGGCATGAAGTAACACCGTCC---------------------------------
-----------AAAAACTAAAGCTTACCATCCAAATAGAAAGTTGTCATGTTTCACAACTAAAATTGGCATCCTCGGGCA
ACTA----------A----------AAACAACGTCAGACTGACATTGCTTCGTGCCACACGTGTGACACTTATCAGGAT-
AAAAAAATGCAAACGGAG-TTTTTTTTTTTTTTTGCTGAGAACATCCAAACGGATTTATTCGTCGACCAACAAATAGCA-
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------------------------TCTCCTGGGCTACAAACGGGCCACGACTAAAAACAGATTCATCGAGAGCGATGGGC
TGCTCTCCACGGGGTCCACGTCGCCGCTCGGCTCGCCAGTCATTTTTTATCGTGGCCCCTGAA-TTTCCCCTCCCTTCTC
CACAGCATTTCCGTCGCCGCTTCTTTTTAACCAGTAAACCCTCCACGGTGTTTCTATTTTCACCTCCTCACCACACATTC
CCCTTCGCCGTCTTCCTGCGGATTCTCATTCAGCTTCTTCCGGCCGCCCCGCCCCCCGCCTCCTCCGGCGGTACTGATTG
TTCTTCTCCACCCCCTTTGGTTCTCTGTCTTTTGAGCTGGTTCCGGTTGAACGGGTCGATTATCTGTATCTGTCCGATCC
GGCATGTGGAGTATTTTGGCTGTTTGGGGTTGGGATTTCT--------------------GGTCTGGAAGAATCTCCAGT
TTCGTGTCCCTTCCAAGATTTTCACTCGGTTCGGTTGTCGGCGGTCGGGAAATGGCCGAATTTGGGCGTGGGCCATTCAT
GAGCTACTGATTTATACAACTTGATGCATGCTGTCCATCTTGATTATGCATATCCTAGTATGGCGCACTGATGTA-----
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--------------------ATCAACATGGAAATCTCAA-AAATAAAATGATGGCGTAGTCTGTGGAGTGTTCTAGTAGC
TTGTAAGTTTTGAGCTTCAAATTCAGTGTGT-GTTGGAAGAAATAGAGAGGATCTTTGTGGGTAGTACAGCACCGGCAGT
TTTCTGTTGCAATTTCCTAGGAAGATATAATAGTTTTGGAGCCCTGAGTTCTTGTCTCTTGGCTGATCAAATCATTCTCT
ATTGTAGATTTGAGTTACCCGCGGCTTCTGAAATCTTCTCCTGTTGCTGGAGAAATGCGCGAGCTGCTTGCCGCAGCTTG
ATGAGTGTCCAGCCATGCCGACGCTACACGGACCCATTCTGTTCGTCAGGCCCGGTGCTTACCAAGAGCTGAAACCGTTC
CCGAAAAACACCGCTGGTTCGTGTAGCAATTTATTGGGTTGCAACACAATTTGTAGTTCCGTCGAAGACCATCATGTACA
GAAGCCACACATTGTTTCTAGCTTGAGAGTTAACTTTACCAGAGTCAGTCATTATCTTCAGAGAAGCTTAAATGAGAGAA
CTACAAGGCACTGGCTGGTACGGTATGCTTTTCCACGGACCTCCCATGTGTTGAATT-CTCAATCACCGTTTGTTTATAT
GTGAACCATTGTGTTGTGTGCAGCATCGGTTTCATGTTAATGCTTCGTCAGATGAGGACTTCCGCTCATCGCGCAATATA
GCGACCAGCCTATTCAAGCAGTATAAGAACGTCATTGATCGAGGAGGTGGAGATAACATAAAGGTATTGC----------
TTCTTGTTGAGATTCTTCACTGGTGTTCTTGACATACCTTCTGTCTGTAATCATTATGTCGCCTTTTAATGTTA-GCAGG
GGTTTGTTAGTGCTGGAGTGCAAGCATATGCCCTAGGCTGTACAGAAGAGGGGCTTAGAAAGGAACTTATGGATATAAAA
AATTCTGGTGTCAAGATCGAAGGCCTGCAATCCTTTGGAGGAACAAGCTTGAGCTTCAAAGTCCGTTCTTTTGAGGTTAG
CATGTTCAAATATACTATAAATTAGTCTGCTTCTGTTTACA-ACTATAATATCTTTTATCTTCATATATCTTGCATTGCA
ACTATACTCTGCTCTGTAGTATTCACAGTTTTACACTCAAACCAATGAGCTTGCTTTGATCCATTCCGTCACCACGTC--
------TTTACTTTCTTCTGAATCTGTTAACGACTGTCGGTAGAT-AAGTCCGATAAGTCACACTGGCAAGATAT--GAA
GTTTGGTATATGGTATCCTATAGCCCCGTAGAGGACA-TGTTCGTTGTGCCAACACCCTTGACGAGATCTTCAGGCGTTT
CGTTTCCATTCGTCTAAAGTCTTAACGATGATTTTTTC------------AGGTAAAGGAGTGCATTCTGTGGCTCAGTA
TAGTGTTCATTACAATCCTATGCACGCCACAGCCGACGGTCATCAGGTGGTCTACCACCCCACCGGTGTCGGCGGACGTC
TTGCATCAGTGGAAAGGATTTTGTGCCCTGATAGCAAACGCTTACTACACCAAGGGCATGGCATGGTAAGAATGTTTTAT
CTGTCGACG-TTTTCTTCTTTTTTATCCCATAATATCCTATA-----TTATATACCACTCCCTCTGTCCCTTAATATAAG
ATGTTTTTGCAGTTCAATTTGAACTGC-GAAAACGTCTTATATTAAGGGGCAGAGGTAGTACTTGCT---ACTGATCAAA
TCCAACGCGGACGAAACTTCGACGCAGGCTACCAGTGAAAACATTGCAGCTGGAACAGATGGCTGTGACAGGCAGTTCGG
AGGAGCCATCGCTAGTAGCAAGTCGGATGCAGTTAGTTTTCAGTACGTTAGAGGTTCGTAGCAGCAATCATTGAATCTCT
GGAAACTAGTCAAATGAAATTACATCCTCATTGTTTTGCCTGGTTATTGTTCCAACTCTGTAGGTAGTCAGCCCCCAATG
GCCAAGAGTGTGATAGAAGGAAGAGCAAGCAATATGATCATACAAAGGCCTGCAAGTTTACAGAACCCATGCCACATCCA
AAGCCAGGGATGAATCTTCTTTCTCTAATGTGAATGTACTGAAGAAACAGGTCTACTGTACTGAAGATTGTGAAGTATTT
ATTTGGTAAATACATGTATATAGAACCCACAGCTGCTGTAAATCTTCGTCTTCAGCTACAATATAATAGAACCGAACATG
TATGTGACTGCTACAACTTTGTGGTTTGCACACTTTTC-GCCGTTTAGTTTGCTAGACATGCGTCAAATTC--CAAGAAT
TTGTCTTGGCCTTTCTGGCGTTATGATTTTAGCGCTAGCAGATTACTTCATTTCTCCTTTTGTAC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---AAAACAAATGGGTTCACAATACTTGTTACTGTCATTGGATTTCTAACCATTAG------------------------
--------------------------------------------------------------------------------
------CGTGTTAACTGTTTTACAAACAACACTGTCCTCCTGTCTTGCAAAGTTGCATTTGCATGTAGTGTAACCCTTCA
CAAAAGAGGAGCAATAAATACCCAGGAAATTTTGACACTGTAAACAGAGTTTACATCAAACTTTTCCGCCATACCTAGTA
CCATCCATGATATTACCAAGCTTTTCGGCATCCTGGACACAAAAATCACAC-CCCCATGAGGCTCAGCTAGATCATCGCA
GTTTCATTGCAAGCCATTAACCCATTCCCTGCATCTGGACCAAGACGTGATAGAATAAAAGAGAGAACAAGAACTTTGTA
CCAGGATTTACAAACTTCATAGCACATCATCGATACTCTCGACACCCTTTTTTCCCCTTTCAATATGATGAAGACTCTGA
GGATTAATTATGTATCTATGTCCCACAAGTGCCCTTCACATTTCACGATAGTTGCTGCTAAAGGTACATGGTGATATAAA
TTAAAGAGT--ATTTTTAGACTAACACCAAGAAAAAGGGGTGAAAAGCTACAATATGACAGAAAACATTCCCTGTTGGAG
CCACCTGCTGCT
>SNPs
--------------------------------------------------S----------S----------S-------
--------------------------------------------------------------------------------
--S------------S--S--S-------S----------------------------S-S-------------------
---S--------------------------------------------------S-------------------------
-------S-S----------------------------------------------------------------------
------------------------------S-S-----------------------------------------------
----------------------------------------S----------SS--S------------------------
-S----------------S------------S----------------S-SS--SSSS----------------S---S-
---SSSSSS---------S----------------S---------S--------------------------S-------
---------------SSSSSSSSSS------------------------------------S--SS---------SS--S
--S---------------S-----------------S-------------------------------------------
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----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
---------------------------S----------------------------------------------------
----------S-------------------S-----------------S------------------S------------
----------------------------------------SSSSSSSSSSSSSSSSSSSS--------------------
----------------------S--S-S------------------------------------------------SS--
------------------------------S---------------------------------S-S-SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S------------SSS--
-S-----------------S-------------------------S----S-----------------------SS----
-------------------------------S---S-S--S-------------S--S--SS------S----SS---S-
---------S---------SS---------SS-S--------------SS---S--SS-------------S--------
SS--------------------------------SSS-------------------------------------------
----------------------------S--S--SS----------S-SS--S--S-------------S----S-S---
-------S------SS--S-S-S--S---S--S--S--S-----S--SS------------------S------------
--------------------------------------------------------------------------------
-----------------------------------------------------S-------------S------------
----------------------------S--------------------------------S------------------
-----------------------------------------------S------------------S--S----------
------------------------------------SS------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
---------------------------------------------------------------S----------------
-------------------------------------------------S--------S--S---S-S-SSSSSSSSSSS
SSSSSS--------------------S------------------S-----S--------------S-----------S-
-------------------S---------------------------------S---------------------S----
-----------S-------------------S------S-S---------------------------------------
----------------------------------------------------------------S---------------
-----------------------------------------------------S------------------S-------
-----S--S--------------S---------------S--S-S---SSSSS-----------------S----S----
-S-SS----S-SSSS-SSS-SSSS-SSS----------S-S----S--SS-S----S------SSS-SSS-------S--
--S--------------------S------S-----------------------------------------------S-
--------------------------------S--------------------------------------S--------
--------------------S-S-------------------------S--SS-------S-------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------SS------------------------------------------------------------------------
--S--------------------------------S-----------------------------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-----------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS------S------------------S------S------------------S-----------------S----
------------------------S------------------------------S----S------S-------S----
---S------------------------------S-----------------------------S---------------
S------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------SS---------------------------S-----------------------------------------
------------
>forward_797
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---------------------------------------------------------CACGCGTCGCACTTATCAAC---
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>reverse_2934
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-----------------------------------------------------ATCCGTGGCTGATCAAAGCA-------
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>forward_2444
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------------------------TGGGGTTGGGATTTCTGGTC------------------------------------
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>reverse_4504
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-----------------------ACAGGCTGCCAGTGAAAACA-------------------------------------
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>forward_3146
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------AGCACCGCCAGTCCATTTAA------------------------------------------------------
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>reverse_4701
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------------------------------------------------------------CAGGTAGTCAGCCCCCAATG
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>forward_4593
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-------------AGTAGCAAGTCGGATGCAGC-----------------------------------------------
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>reverse_5509
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--------------------------------------------------------------------AACGTAGGAACC
AGGAAGCG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
