>input_sequence_27522
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------------------------------------------------------------------GCCCGAAGAGAATC
CAGCCTCTGACACTCTTGTTTAATTCCTTCCTTGCCAAAGCTAGGCAGCGATGATGAGCTTCAAGGGCCACGACGGATTC
GGGCAGGCCTCCAATGGTGGTGG---TGGTGGAGCCTCCGTGCCATGGTGGACGGTGTCCCAGATGCTGTACGGGGAGCC
GGGGGCCGCCTTGTCGTCGTCGCCGGAGGCGGAGCCTCGCCGGGACGCCCAGTTCCAGGTCGTGCCCAGAGCTCAGGGCA
TCCTGGATCCACT---------GCCGGCGCCCAAGAGCGGGGCTCCTGAGGTCCTCAAGTTCTCGGTGTTCCAAGGTGAG
CCTGCTCTGCCTCCTTGCTAGCAGCTTGTGGAATTAATGGTTACTATTGCAAGAATTTGGCATCGCTTCT---TTGGATC
TGTGCATGCTACC-ATGCCGGTGAACACAAGGTTGAATTACATGTCCCATGGCCTAGTTTGAAATAGGATTCCATAATCA
TGTAGTAAATCTTAAATCTTGGCAGACCCTTCTGCCAAGATATGCATGTGAGTTTAGAATATGATATGGCACTTCACTCT
TTTCTCCTCCTCATATGACGAAAAAAATT-TTCCCGGAAGAAAATATATATGATGCAACAACTTGGTA---TGAACTACT
AGATG---AATTTGCGTATGATGGGTGCTGATGAACAAGACTTGTGAACAAGTTTAAAGAGTGACGAGGGCTGCAGGCTT
GCTTTTATAGTATTATCCAAAATATTGGAAGGGCACGGATTACCTAAGCCCAAGATTAGGAAAGAAAATAC---CAATCA
GAATATTATATTTTGAAGACGTAGCAGTTGGGTCT-CCAAGTCTGTTATTTTTGTACTGACTAAGATAAGCTTTTCTCTG
ATGAAGATGGTATTAGTTCACAGCCGAGCTGGATATTCTGCTCCCGTGTTTGTTCGCACAATCATTAGCCCTATTTATTT
TTATGTACACGAAAGCATGCCCTATCTCTATGTG-------------------CTCAGTTATGCAAAAGGCCGGGTGTGA
ACTCATCGTGCTTA-TATTACCGCGATGCGTCA------TTATGAGTCAATAAAAGTGCCCTTTATCAAAAATAGAATGT
GGTAAGGCACATGTGC-TTCTTTTACAGTGATGTGATAAGGCACATGTTTGATGGTTACTGTTTGACATTTTGAACATGA
AATTGGTTTTGGCCTCGTCTAACCATATACTAATCAGCTACACGGTAGCTCTTGATGGAATCTGATACAGCTATTCACTT
CAAAGATTCCATGAGTAACATACACGTCTGTCCAACCACATGGAGCTCACCTGTATAGTAATATAAAGCTTACATCTCCA
TTTCGATAATACTAATGCAGATAAGGAAGCATCAGCATCTAGCAGTTTAAAAAATTGATCTAGGTTACATACTACACTTT
TGTGGTTGGGGTTTTGAGAAACTGTGATGCTCAGGGAATTTGGAGTCGGGAGGCAACAAAGGAGAGAAGCCCATGGAGCA
CTCCGCCACCATCGCACTGCAGTCGCCGCTCCCGGAATACAACAGTCGCTTCGAATTTGGCCCGGGTCCTTCCATGGTAT
GCTTTTCGATTACTGCTATTTTATGTTCAAAATATGGTTGGAATTTGTC-CAACTTTACAGCTGAAAA-TTGTTTCGGGA
TGTCTCCAGTTTTCAGTTGCTAACTTGCCACATGTGTTTCAGATGTCTTCTGGTTATCCTTCAGCCGAGCAGTGCTATGG
CCTGCTTACCACTTACGCGATGAAATCTACGGTAAGCTTTGGTGTGTTTTGTGTGCTCTATTTTGGGAGCCTTCTTTTTT
CTGTGATATTATTCTCTAACGCCGCCTTCTTTTTTTGTGTTGCTCGTAGCCTGGTGGCCGATTGCTCTTGCCACTGAATG
CAACAGCTGACGCGCCGATTTACGTGAATGCGAAGCAGTATGAAGGCATCCTTCGCCGCCGCCGTGCTCGTGCCAAGGTG
GAGCGAGAGAATCAGCTGGTGAAAGGAAGAAAGGTAAGCCTGCACTTCCACCACCAAGTCCATGTCATTTACAGAGATCG
GGGAAAACAAACCTCTT-CATTTGCCAACAAAAAAA---ACGTCACTCAACATTTCATTCAAATATTCTCATCGCCGCTT
ATGACCATGTTTTGAAACGAAGGCAAAATATTTACCTCATCGATTATGGTC-----------------------------
----------------ATGGCGCAGCCGTATCTTCACGAATCACGCCACCGCCACGCGATGCGCCGGGCGAGGGGCACGG
GAGGGCGCTTCCTGAACACCAAGAAGGAGGGGAATGGCAAGGACGCTGGAGGAGGAGGCAAGAGGGCAGAGTGCGCCCCG
CCCACGCGCTTCGCCACGTCTCCGAGCTCCGTCATCCCGAGCAACCCGCACTCCCGGAGCAGCATCTCGAGCCTCTCCGG
CTCGGAGGTGTCGAGCATGTACGACCACGACGACGTGGACCACTACAACAGCATCGAGCACCTCCGGACGCCCTTCTTCA
CCCCGCTGCCGATCATCATGGACGGCGAGCACGGGGCATCCGCCCCCTTCAAGTGGGCCACGGCCGCCGACGGCTGCTGT
GAGCTCCTCAAGGCGTGACTTGAGGGGGGTAC-ACGCAGGCACCCAGATCAAGAGCCGGCCATGGCCGGCTCTGGCTCCG
TCTGGTTGTCTGCAGGCAAATCATTCTTGGCTCTACTGCATTGGGGTGTCCTTCCACGTCGCATTACCTCTTCCCTGAGA
ACTCCGGTGCTGGTTCTCAGGGATCTTGTGATGATGGGGCTCCCCATATGCCTGTAAAATAGTATCGGAAGCACTAGCAG
TGTACTACGGGTATGAACTCTGTGGTA-----------------------------------------------------
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>chr5A_1_TraesCS5A01G373500
TGCTCCGGCGCCCGTACTGCTATTACAGGAATCTAAAGTACCGCCAAGTTGCGCCAGACCGGGGTGC-GCAAAGGCGA-T
TGAAGGAAGCCCACTGCACCGAAGGAGCTAGTGGCCATCTTTTCAGCTCGAGCCGGGAGGGAGGCCGAGGAGAGAGAGAG
AGAGAGAGACCTTTCTTGGTTTCTGCCCTCTGTCCGTCCCCACTGTCATTCATT--------------------------
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---------------------------------------------------C----ATTCATTCATTCATATACTAGTCC
TGCATCCACATCTCCT--CTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGTGCCGCTTCTTGCTTGCCATTATTAGA
-------TGGTCTTCCC---CAGCTGA------GCCTGAGATGCGAGCGGGCTTTGCTTGATAGATTCCCCTCTCCGCGG
CGCAGACGACCACCCGCCGGCCGCCCCTGCCGTCGCTCTGGTTCGTCCTAAAT-CCCCCTCT-----CCGGTTTTCCATA
CGTGTACGAG-----TGCTCTGCTCTGCTCAAAGTTGTCTCTGCTGTTGGGTG-----------G-AAAATCCCTGGCCT
TCTGAAAGTCAGGGGGGGCTCTGCTCTCTTCTTTCCAAGCTGATCTCCTCTCCTTGTGGGCACAGCCATGGAAA------
-----------------------------------------TTGCTCCTCTTCTCTCTGGCCAACACAAA----ACGTGT
TCGCCTCTCCTGGCTCTCTCTCTCTGCCCCGGTTTCTGCCGCCTCTTCGGATTTCACCTCGGCCGT-CGTCTCCCCTGCC
GGCGTCTTGGTTTCTTGCGCGTTTCCTGTGGCA---TATCCACTAGCTCATGGCATGCATCTCGATGCTACGGTTCTTGC
CCCATCTGTCCTGCCTGCTTCTCGGGAGCAGCTCCCCT-CCCTCCCCACTTGCTTCGTTTCTTTAATTTCATAATTTT--
--TATTCCCCGCGATTGCTCGTTTTTGTTTTCACCTCCTCGGCTCCTACACTCATCTCTCTGAATTCCTCTTTAATTATT
GGTTTGGCATGGGTGGTTGGACGCTTA--GCTAGGCTAAAGATCCTGCAACACCATTCTTGTCCTGGCCCGAAGAGAATC
CAGCCTCTGACACTCTTGTTTAATTCCTTCCTTGCCAAAGCTAGGCAGCGATGATGAGCTTCAAGGGCCACGACGGATTC
GGGCAGGCCTCCAATGGTGGTGG---TGGTGGAGCCTCCGTGCCATGGTGGACGGTGTCCCAGATGCTGTACGGGGAGCC
GGGGGCCGCCTTGTCGTCGTCGCCGGAGGCGGAGCCTCGCCGGGACGCCCAGTTCCAGGTCGTGCCCAGAGCTCAGGGCA
TCCTGGATCCACT---------GCCGGCGCCCAAGAGCGGGGCTCCTGAGGTCCTCAAGTTCTCGGTGTTCCAAGGTGAG
CCTGCTCTGCCTCCTTGCTAGCAGCTTGTGGAATTAATGGTTACTATTGCAAGAATTTGGCATCGCTTCT---TTGGATC
TGTGCATGCTACC-ATGCCGGTGAACACAAGGTTGAATTACATGTCCCATGGCCTAGTTTGAAATAGGATTCCATAATCA
TGTAGTAAATCTTAAATCTTGGCAGACCCTTCTGCCAAGATATGCATGTGAGTTTAGAATATGATATGGCACTTCACTCT
TTTCTCCTCCTCATATGACGAAAAAAATT-TTCCCGGAAGAAAATATATATGATGCAACAACTTGGTA---TGAACTACT
AGATG---AATTTGCGTATGATGGGTGCTGATGAACAAGACTTGTGAACAAGTTTAAAGAGTGACGAGGGCTGCAGGCTT
GCTTTTATAGTATTATCCAAAATATTGGAAGGGCACGGATTACCTAAGCCCAAGATTAGGAAAGAAAATAC---CAATCA
GAATATTATATTTTGAAGACGTAGCAGTTGGGTCT-CCAAGTCTGTTATTTTTGTACTGACTAAGATAAGCTTTTCTCTG
ATGAAGATGGTATTAGTTCACAGCCGAGCTGGATATTCTGCTCCCGTGTTTGTTCGCACAATCATTAGCCCTATTTATTT
TTATGTACACGAAAGCATGCCCTATCTCTATGTG-------------------CTCAGTTATGCAAAAGGCCGGGTGTGA
ACTCATCGTGCTTA-TATTACCGCGATGCGTCA------TTATGAGTCAATAAAAGTGCCCTTTATCAAAAATAGAATGT
GGTAAGGCACATGTGC-TTCTTTTACAGTGATGTGATAAGGCACATGTTTGATGGTTACTGTTTGACATTTTGAACATGA
AATTGGTTTTGGCCTCGTCTAACCATATACTAATCAGCTACACGGTAGCTCTTGATGGAATCTGATACAGCTATTCACTT
CAAAGATTCCATGAGTAACATACACGTCTGTCCAACCACATGGAGCTCACCTGTATAGTAATATAAAGCTTACATCTCCA
TTTCGATAATACTAATGCAGATAAGGAAGCATCAGCATCTAGCAGTTTAAAAAATTGATCTAGGTTACATACTACACTTT
TGTGGTTGGGGTTTTGAGAAACTGTGATGCTCAGGGAATTTGGAGTCGGGAGGCAACAAAGGAGAGAAGCCCATGGAGCA
CTCCGCCACCATCGCACTGCAGTCGCCGCTCCCGGAATACAACAGTCGCTTCGAATTTGGCCCGGGTCCTTCCATGGTAT
GCTTTTCGATTACTGCTATTTTATGTTCAAAATATGGTTGGAATTTGTC-CAACTTTACAGCTGAAAA-TTGTTTCGGGA
TGTCTCCAGTTTTCAGTTGCTAACTTGCCACATGTGTTTCAGATGTCTTCTGGTTATCCTTCAGCCGAGCAGTGCTATGG
CCTGCTTACCACTTACGCGATGAAATCTACGGTAAGCTTTGGTGTGTTTTGTGTGCTCTATTTTGGGAGCCTTCTTTTTT
CTGTGATATTATTCTCTAACGCCGCCTTCTTTTTTTGTGTTGCTCGTAGCCTGGTGGCCGATTGCTCTTGCCACTGAATG
CAACAGCTGACGCGCCGATTTACGTGAATGCGAAGCAGTATGAAGGCATCCTTCGCCGCCGCCGTGCTCGTGCCAAGGTG
GAGCGAGAGAATCAGCTGGTGAAAGGAAGAAAGGTAAGCCTGCACTTCCACCACCAAGTCCATGTCATTTACAGAGATCG
GGGAAAACAAACCTCTT-CATTTGCCAACAAAAAAA---ACGTCACTCAACATTTCATTCAAATATTCTCATCGCCGCTT
ATGACCATGTTTTGAAACGAAGGCAAAATATTTACCTCATCGATTATGGTC-----------------------------
----------------ATGGCGCAGCCGTATCTTCACGAATCACGCCACCGCCACGCGATGCGCCGGGCGAGGGGCACGG
GAGGGCGCTTCCTGAACACCAAGAAGGAGGGGAATGGCAAGGACGCTGGAGGAGGAGGCAAGAGGGCAGAGTGCGCCCCG
CCCACGCGCTTCGCCACGTCTCCGAGCTCCGTCATCCCGAGCAACCCGCACTCCCGGAGCAGCATCTCGAGCCTCTCCGG
CTCGGAGGTGTCGAGCATGTACGACCACGACGACGTGGACCACTACAACAGCATCGAGCACCTCCGGACGCCCTTCTTCA
CCCCGCTGCCGATCATCATGGACGGCGAGCACGGGGCATCCGCCCCCTTCAAGTGGGCCACGGCCGCCGACGGCTGCTGT
GAGCTCCTCAAGGCGTGACTTGAGGGGGGTAC-ACGCAGGCACCCAGATCAAGAGCCGGCCATGGCCGGCTCTGGCTCCG
TCTGGTTGTCTGCAGGCAAATCATTCTTGGCTCTACTGCATTGGGGTGTCCTTCCACGTCGCATTACCTCTTCCCTGAGA
ACTCCGGTGCTGGTTCTCAGGGATCTTGTGATGATGGGGCTCCCCATATGCCTGTAAAATAGTATCGGAAGCACTAGCAG
TGTACTACGGGTATGAACTCTGTGGTACTATCAGGTATCTGTG----TCAGAACTCAGAATAAGTATCAAACTTCAGGGT
CTTGTGGTGTATTATTAGGGTCTGAAAC-TTTGTGCCCTTGGCAATGTACTGGGGTAAGTTGGAGTTTTTGTTTGTTTTG
TTTTT----GATAAGCTTTAAGACATTAAATCTATTGTGCTCGC-AATATATGATTTGTAAGCTTGTCTGCATAATAATT
AGAAATGTTACCGGTTTGTTTGATATTACTGCAAT-TTTTTACAGCTTGATTTGACATTGGGATTGTTCCTCGGTTCACT
GACAAATAAAAACACAACACCATTTTCTTTAACAATTATAAAACCCTTCCAGGGG-AAAAACAACGTGCACGGCTGCGAT
CTTCATATATCATTCACACACCTCTGAATTCAAACTCCAACCTAGACTTTTC-----------------AGTGA------
-----------TTCAGTATGCAGATGATACAATTTTAACCCTTCCTACCGTTCAAAGCCAACTTGAGCAAGTGGATAATC
TGCTGAAGCATTTTGCCGCACAAACAGGGTTGAAAACAAATTTCCACAAATCCAT-------------------------
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--------------------------------CATGATACCCATCAATGTGAAGGAGTTCTTTGCACAA---CTTAATAC
CCTGGGATGCAAAAGAGGTAGCTTTCCATTTACATATCTAGGGCTCCCCCTAAGTGCCAGTAGGCTCAGGATTGAAGATT
TCACCCCAATCTGTAAACAAACTGAAAGAAGGATGGCAGGATGCTCAACCATGCTTTCATAGGATGGAAGATTTCTTCAC
ACTAAATCTGTTTTTTGCCAATCTCTTTCATGAGCACCCTTGCACTTCCCGCGTCAGTTACCAGCCAGATCAACAAGTAT
TTGAGAAACTTCCTATGGAGAAAGTATGGTCATCGGATTGTTGGACATGCCCTTAGTGCCTAGGATAAAGTATGCAACCC
AAAAGCTCAAGGAGGTCTAGGAATATTAGATGTGGCACTACATAACAAGGCTTTGATGATGAAGAATATTCAAAAATCTA
TCAACAAACAACC
>chr5B_11
----------CCCGTACTACTGTTACAGGAATCTAAAGTACCGCCAAGTTGCAACAGAGCAGTGTGTTGCAAAGGTGA-T
TAAAGGAAGCCCACTGCACCGAAGGAGTTAGTGGCGATCTTTTCGGCCCGAACCGGGAGGGAGGCCGAG-----------
-GAGAGAGACCTTTCTTGGTTTCTGCCCTCTGTCCGTCCCCACTCGCATTCATTCATCCATAGTTAGATTCACGTCTAAA
CCTGAGCTCTCTCAGAGCTCGGGCAATTTGGGCCGTCCAATCAAAATCTACTTCTGACACAGACCGTCGGATCTCGACCT
AAATCGTTGTGGGTCGTTGGATCACAAAGGGGTTTGTCCTCGGACGATGTGTATGCCTTCGCATGCTTACTTTTGCGCTT
CAACTTCACGCCGGCTTGGTTGGCGAGCTCGTCCTTAAACAAAGGCTCCCAATCGATGTTCATTTCATCCTCTTCCTCGA
GGCCGTAGTTCTTCGGGAACTCGTGGTCGAGCAGGAAGCTGCCCAGGCCGACCTGATCTTGCATGAAGGTGTCGTCCATG
CCGGCTTGATCATAGGTCACCGGTGTGAATGGCGCTCGACCGTCTTGGCTTTGGGTCTCCTCGGGATCGTAGGCAGCGGC
GGCGGCGACGCCAGCTGAGGCAGCGGCCGCCGCACCGCCTTTGAAGATGATGTTCCCGATGATGAAATGGTTGGTTGTTT
CCTCGTCACCGGCCACCGGCATTCTATCGAATAGGTTGCGGGCGCTGGGGAGCTTGTCGGCTGGTATCTTCCGCGGGCGT
TTCCTCGCCCCTCCGGAGGGATGATGCATCGGCCACCGGCGTGGCGTTGAGGTCGATGGCCACGGGCGCGGATGTGGACG
ACGCCACCACGCTCACCTCCAACGAGCATTCTCGGAGATGCGGGAGGCTTGCGGATAGACGTGAAAGCCGGGGATCGGCT
GCGTGGCAGACGCGCGTGACGACTCTGGCAGCACCATTCGAGGAAATGCCGACGAGCCCGTGCTGCCCGCGGTCACAGCA
GCGCTGACGAGCCCGTGCTGGCCAGGGTTTAACCCTGGGTAGAGCAGTGCCTCCCTTGTTGCCATGGCAACTCGGGCATT
GTTTTCCTTATGTTGTGCGGCGGCGGAGAGGGCGGCGACGACAACTACTTCTTCCCTTGCGTCCGCTACATGCCTCCAGC
CCCTCCTCTTGGCCGACTTCACGGCCCGCTCCTCGGGCGTCAGCTTCTTCTTCTTCTTGGGCGGCGCCGCGGTCTTGAGG
GACGCACTGGGCTTGCCTTTAGCGGAGGCGTCAGAGGTGAAGCCGGACGAGGTGAGGGATGCGAGGACGGCGGCGACATT
GAGGGTCGGCGTGTCGTCCATGGCGAGCGACCGGGAACGCGAGCGGGCGGGAGAGTTTTGAGAAGGTGAAGGGAAAGGGT
TGTCACTGTGCCACCGACTGGTTGGCCAGGGGAGAAGTAGGCGTGCGTCCGCTTCGTGTCCGCGCTGACGCAAATAAAGC
CCAAATTTGAGCCAGAAATGGGTTGTCGGGTGGACGAAAAGCGGACGCACGTCCTTTTGGATCGGCGCGTTGGTCCGACT
TTTCTGTCCCCGGCGACCCAAACGGATACGCGCGGACGAAATGGGTCGGCGCATTGGAGTTGCTTGAACGGTAGGTAGGT
TCCAAAAATCGGGCGATCCTTGAAAGTTTTTCACGCAGCAGACGGATAGGTGCTCCCATTTTTTGCGAGTCCGCTGAAGC
ACAAACAACAAAATAGCGGGAGAGAGCTGAAGATGAGGAGCAGCCAGAGCTAGGTATGTGAATCACCCACTGTAGGTCCG
TTTGGCTGGTGGGAGGACAAATATAGGGGCACTCGCATCGCATGCATCATCGCCACTCCCATTTGGTGTGTACTCTACTT
CCTCGTTGCCTTTCTCAGAGGGGAGGGGGGAGGAAACAGGGAAGGACGAAGGGGGAACATCAAACAGTTGGCAAGCTAGT
ACCAACCAGCTAGGCGCATGCACGACCAATTTGGCATACGACACGGCTCGGGCTCGGGCTCACCACCGTTGCGTCGCGTG
TGTCCCGGGAAGAATCACGATCGCCAATCCCATACTTACGCGCTCATCATCGGTCCATCCATCAGGCAAGTACTCCTGCT
ACTGCTACTTCAGTACCCGTACTACTATTACAGGAATCTAAAGTACCGCCAAGTTGCACCAGACCGGTGTGTTGCAAAGG
CGATTAAAGGCAAGCCCGCTGCACCGAAGTAGCTAGTGGCAATCTTTTCAGCTCGAACCGGGAGGCCGAAGAGAGAGAGA
GGGGGAGAGAGAGACCTTTCTTGGTTTCTGCCCTCTGTCCGTCCCCACTGGCATAAATTCATCCATTCATATACTAGTCC
TGCAACCACATCTCCTCCCTCCCCCCTCCCTCTCTCTC-------CTCCCTGCTGCCGCTTGTTGCTTGCCATTATTAGA
-------TGGTCTCCCC---CAGCAGCTGAGCGGCCTGAGATGCGAGCGGGCTCTGCTTGATTGATTCCCCTCTCCGCCG
CGCAGACCACCC----------------GCCGTCGCCCTGGTTCGTCCTAAACCCCCCCTCT-----CCGGTTTTCCATA
CGTGTACCAGTGCTCTGCTCTGCTCTGCTCAAAGTTCTCTCTGCTGTGGGGTG-----------GGAAAATCTCTGGCCT
TCTGAAAGTCCGGGGGGCTCCTGCTCTCTTCTTTCCAAGCTGATCTCATCTCCCCGTGGGCTTCTTCCCGTCCCAGTAGA
GTACTACTACTCTTGGCCAAGGAAATTGCTTCCGTTCAGTTCTCCTCTTCTTCCTTCTGTGCTCTGCTCCGTTTTC----
---------------------------------TTCTGCTGGCTCTTCGGGTTTCGTCGCGGCCGGCCGTCTCCCCTGCC
GGCGTCTTGGTTTCTTGCGCGTTTCCTGTGCCA---TATCCACTAGCTCATGGCATGCATCTCGATGCTACGGTTCTTGC
CCCATCTGTCCTGCCTGGTTCTTGGGGGCAGCTCCC-----CTCCCCACTTGCGTCGTTTCTTTATG----TAATTTTAT
TCCATTCCCCGCGATTGCTCGTTTTTGTTTTTACCTCCTCGGCTCGTACACTCATCTCTCGGAATTTCTCTTTAATTATT
GGTTTGGCATGGGTGGTTGGATGCTTA--GCTAAGCTAGAGATCCTGCAAGAGCATTCTTGTCCTGGCCCAAAGAGAATC
CAGCCTCTGACACTCCCGTTTAATTCCTTCCTTGGCAAAGCTAGGCAGCGATGATGAGCTTCAAGGGCCACGAAGGATTC
GGGCAGGCCTCCAATGGTGGTGGAGG---------CCCGGTGCCATGGTGGACGGTGTCCCAGATGCTGTACGGGGACCC
GGGGGCCGCCTTGTCGTCGTCGCCGGAGGCGGAGGCTCGCCGGGACGGCCAGTTCCAGGTCGTCCCCAGAGCTCAGGGCA
TCCTGGATCCCGCACCGCCACCGCCGGCGCCCAGGAGCGGGGCTCCTGAGGTCCTCAAGTTCTCCGTGTTCCAAGGTGAG
CCTGCTCTGCATATTTGCTAGCTTGTGG-------AATGGTTACTGTTGCAAGAATTTGGCATGGCTTC---GTTGGATC
TCTGCATGCTACC-ATGCCGGTGAACACACGGTTGAATTACATATCCCATGGCCTAATTTGAAATAGGATTCCATAATCA
TGTAGTAAATCTTAAATCTTGGCAGACCCTTTTGCCAAGATATGCATGTGAGTTTAGAAT--GATATGACACCTGACTCT
TTTCTCCTCCTCATATGACGACAAAAAGAATTCCTGGAAGAAAATAGGTTTAATGCAACAACTTGGTAGTATGA---ACT
AGATGAAAAATTTGCGTATGATGGGTGCTGATGAACAAGACTTGTCAACAAGTTTAAAGAGTGACGAGGGCTGCAGGCTT
GCTTTTATAGTATTATCCAAAATATTGGAAGGGCACGGATTACCTAAGCCCAAGATTAGGAAAGAAAATACTACCAATCA
GAATATTATATTTTGAAGACGTAGCAGTTGGGTCTCCCAAGTCTGTTATTTTTGTACCAACTGAGATAAGCTTTTCTTTG
ATGAACATGGTATTAGTTCACAGCTGAGCTGGATATTCTGCTCCCGTGTTTGTTCGCACAATCATTAGCCCT----GTTT
TTATGTACACTAAAGCATGCCCTATCTCTATGTGATAAGAACATGCGGCTGTGCTCAGTTGTGCAGAAGGCCGGGTGTGA
ACTCGTCATGCTTATTTTTACCGCGATGCTTCA------TTATGAGTCAATAAAATTGCCCTCTATCAT-AATAAAATGT
GACG-------------------TACAGTGATGTGATAAGGCACATGTTTGATGGTTACTGTTTGACATTTTGAACATGA
AATTGGTTTTGGCCTCGTATAACCATATACTAATCAGCTACACGGTAGCTCTTGATGGAATCTGATACAGCTATTTACTT
CTAAGATTCCATGAGTAACATACACGTCTGTCCAACCACATGGAGCTCACCTGTATAGTAATATAAAGCTTACATCTCCA
TTTCGATAATACTAATGCAGATAAGGAAGCATCAGCATCTAGCAGTTTTAAAAATTGATCTAGGATACATAGTACACTCT
TGTGGTCGAGGTTTTGAGAAACTGTGATGCGCAGGGAATTTGGAGTCGGGAGGCAACAAAGGAGAGAAGGCCTTGGAGCA
CTCCGCCACCATCGCACTGCAGTCGCCGCTCCCGGAATACAACAGTCACTTTGAATTTGGCCCGGGTCCTTCCATGGTAT
ACTTT------------A--TTATGTTGGAAATATGGTTGGAATTTGTC-CAACTTTACAGCTGAAAA-TTGTTTTTGGA
TGTCTCCAGTTTTCAGTTGCTAACTTGCCACATGTGTTTCAGATGTCTTCTGGTTATCCTTCAGCTGACCAGTGCTATGG
CCTGCTTACCACTTATGCGATGAAATCGACGGTAAGCTTTGGTGTGTATTGTTTGCTCTATTTTCGACGGCTTCTTTTTT
CTGTGATATTATTCTCTAACGCCTTCC----TTTTTCTGTTCATCGTAGCCCGGTGGCCGATTGCTCTTGCCACTGAATG
CAACAGCTGACGCGCCGATTTACGTGAATGCAAAGCAGTATGAAGGCATCCTTCGCCGCCGCCGTGCTCGCGCCAAGGTG
GAGCCAGAGAATCAGCTTGTGAAAGGAAGAAAGGTAAGCCTGCACTTCCAC---------------------------TG
GGGAAAACAAACATCTTCCATTTGCCAACAAAAACACATGTCAG--TCAACATTTCTTTCAAACATTCTCATTGCCACTT
ATGA---------------------------------------------TC-----------------------------
----------------ATGTCACAGCCGTATCTTCACGAATCACGCCACCGCCACGCGATGCGCCGGGCGAGGGGCACGG
GAGGGCGCTTCCTCAACACGAA---GGAGGGGGGTGGCAAAGACACTCCCGGAGGAGGCAAGAGGGCAGACTGCGCCCCG
CCCACGCGCTTCGCCACGTCCCCGAGCTCCGTCATCCCG---------CAATCCCGGAGCAGCATCTCGAGCCTCTCCGG
CTCGGAGGTGTCGAGCATGTACGACCACGACGACGTGGACCACTACAACAGCATCGAGCACCTCCGGACCCCCTTCTTCA
CCCCGCTGCCGATCATCATGGACGGCGAGCACGGGGCATCCGCCCCCTTCAAGTGGGCCACGGCCGCCGACGGCTGCTGT
GAGCTCCTCAAGGCGTGACTTGAGGGGGGGTATACGCAGGCACCCAGATCAAGAGCCGGCCATGGCCGGCTCTGGCTCCG
TCTGGTTGTCTGTAGGCAAATCATTCTTGGCTCTACTGCATTGGGGCG-CCTTCCACATCGCACTACCACTTCCCTGAAA
ACTCCGGTGCTGGTTTTCGGGGATCTTGTGATGATGGGGCTCCCCATATGCCTGTAAAATAGTATCGGAAGCACTGGCAG
TGTACTACGGGTATGAACTCTTTGGTATCAGGCATCTGTGTCAGAACT-------CAGAATAAGTGTTAGACCTCAGGGT
CTTGTGATGTATTATTAGGGTCGGAAACTTTTGTGCTCTTGGCAATGTACTGGAGTAAGTTGGAGTTTGTTTG---TTTG
TTTTC----GATAAGTTTTAAGACATTAAGTCTGTTGTACTCGC-AATATATGATTTGTAAGCTTGTCTGCACAATAATT
AGAAATGTTACCAGTTTGTCGAATATTCTTGCAAACTTTTTACAGCTTGATAGGCATTGGA-ATTGTTCCCCGGTTCACT
GGCAACTAAACACACAACACCA-TTTTTTTAACAATTATAAAACCCTTGCAGGCGG-AAAACAACGTGCACGGCTGCGAT
CTTCATATATCATTCAGACACCTCTGAATTCAAACTCCAACCCAGACTTTTC-----------------AGTGATTCGGT
CTTCCTAGTTATTCAGTATGTAGATGATACAATTTTAACCCTTCCTGCCATTCAAAGCCAACTTGAGC---------ATC
TGCTGAAGCATTTTGCTGCACAAACAAGGTTGAAAATAAATTTCCACAAATCCATCATGATTAAGGATGGCAATTTTATC
CATGGACATGGATATCCATGGATATCCGACCCGAATGGATAGGGTTTTGGATATGCTTTTGTGTCCATGGGCGGCGCCCA
AACCCGACCCGATTGTTCATGGGTAGGCCATGGATATAATCATGTACCCATGGATATACCGAAACCCGACCCGATAGTAT
GACTTAATGGGAAAAAAATTCTGCTATCCCTGCCCCATGTTCACATGTCCCACTGCAATCTTACACTTTTTTATCTAAAA
CATGCATAAGAAATTACACAATCCCCATCGTAACTTTTATAAGTTGATAGTCAATCCCCTCCGTAACATACTCCAACACC
CCTTCCCTTATTTTTATCTCCTTCTTAAATGACTCGTCATTCTCATCTATTAGAAAAATAATAAATGATCTTAGGTTGTT
ACTGTATGTTGATTTACCATAAGTGAAGCCTGGCCTGCCATGAGGTGAAGAATGAAAGAGTTTATGTTAATATTGTGTTA
AGTCTTATTTTGTATGTCTCGAGAGGACCCAATGGATATCCAGTGAAAATGGATATCCATCGGATTTGGACATGAACACA
ATTTTTCATCCATGGATTTTTTCATGGGCGGGCAAAGGTTGTCTTCATGGATATGGATATGGATTTGATATTGTTCAACC
CGATCCAAACCCGACCCATTGCCATCCTTAATCATGATACACATCAATGTGGAGGAGTTCTTTACACAACTTCTTAATAC
CCTAGGATGCAAAAGAGGTAGCTTTCCATTTACATATCTAGGGCTCCCCCTAAGTGCCTGCAGACTAAGGATTGCAGATT
TCACCACAATCTGTCAACAAACT---------------------------------------------------------
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>chr5D_13
------------CGTACTACTATTACAGGAATCTAAAGTACCGCCAAGTTGCGCCAGACCAGTGTGC-GCAAAGGTGATT
TAAAGCAAGCCCACTGCACCGAAGGAGTTAGTGGCCATCTTTTCGGCTCGAACCGGGAGGGAG---------------AG
AGAGAGAGACCTTTCTTGGTTTCTGCCCTCTGTCCGTCCCCA--------------------------------------
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----------------------------------------GTCCCCACTGGC----ATTCATTCATTCATATACTAGTCC
TGCATCCACATCTCCCTCTCCCTCCC-----------------CTCTCTCTCCTGCCGCCTGTTGCTTGCCATTATTAGA
GAGAAGATGGTCTCCCCCAGCAGCTGA------GCCTGAGATGCGAGCGGGCTCTGCTGGCTTGATTCCCCTCTCCCCCG
CGCAGACCACCACCCGCC-GCCGCCCCTGCCGTCGCTCTGGTTCGTCCTCACT-CCCACCTCGCCTCCCGGTTTTCCATA
CGTGTACGA----------CTGCTCTGCTCAAAGTTCTCTCTGCTCTGCTAGCCCTTGTTGGGTGGAAAATCTCTGGCCT
TCTGAAAGTCAGGGGGCGCTCTGCTCTCTTCTTTCCAAGCTGATCTCATCTCCTTGTGGGCACAGCCATGGAAAATTGC-
----------------------------------TTCAGTTTTCCTCTTCTTCTTTTTTGCCAACACAAACAAAACTGGT
TCATCTCCCCTGGCTCTC------TGCTCCGGTTTCTTCTGGCTCTTCGGGTTTCATCTCGGCCATCTGG---CCCTGCC
GGCCTCTTGGTTTCTTGCGCGTTTCCTGTGGCATACTATCCACTAGCTCATGGCATGCATCTCGATGCTACGGTTCTTGC
CCCATCTGTCCTGCCTGGTTCTTGGGGGCAGCTCCCCTCCCCTCCCCACTTGCTTCGTTTCTTTAATTTGATAATTTTAT
TCTATTCCCCGCGATTGCTCGTTTTTGTTTTTACCTCCTCCGCTCCTACACTGATCTCTCTGAATTCCTCTTTAATTATT
GGTTTGGCATGAGTGGTTGGATGCTTATAGCTAAGCGAAAGATCCTGCAACAGCATTCTTGTCCTGGCCCGAAGAGAATC
CGGCCTCTGACACTCCCGTTTAATTCCTTCCTTGGCAAAGATAGGCAGCGATGATGAGCTTCAAGGGCCACGACGGATTC
GGGCAGGCCTCCAATGGTGGTGGTGGTGGTGGAGCCCCGGTGCCATGGTGGACGGTGTCCCAGATGCTGTACGGGGAGCC
GGGGGCCGCCCTGTCGTCGTCGCCCGAGCCGGAGGTTCGCCGGGACGGCCAGTTCCAGGTCGTGCCCAGAGCTCAGGGCA
TCCTGGATCCGGCACCGCC------GGCGCCCAAGGGTGGGGCTCCTGAGGTCCTCAAGTTCTCGGTGTTCCAAGGTGAG
CCTGCTCTGCCTCCTTGCTA--------------------------TAGCAAGAATTCGGTATGGCTTATTAGTTGGATC
TGTGCATGCAAGATATGCCGGTGAACACAAGGGAATGATATGACACT---------------------------------
-----TAACTCTTAAATCTTGGCAGACCCTTCTGCCAAGATATGCATGTGAGTTTAGAAT--GATATAACACTTAACTCT
TTTCTCCTCCTCATATGACGAAAAAT--AATTCCCGGAAGAAAATAGGTTTGATGCAACAACTTGGTA---TGA---ACT
AGATG---AATTTGCATATGATGGATGCTGATGAACAAGACTTGTCAACAAGTTTAAAGAGTGACGAGGGCTGCAGGCTT
GCTTTA----TATTATCCAAAAAATTAGAAGGGCACTGGTTACCTAAGCCCAAGATTAGGAAAGAAAATACTACCAATCA
GAATATTATATTTTGAAGACGTAGCAGTTGGGTCTCC-AAGTCTGTTATTTTTGTACGAACTAAGATAAGCTTTTCTTTG
ATGAACATGTCATTAGTTCACAGCTGAGCTGGATATTCTGCTCCCGTGTTTGTTCGTGCAATCATTAGCCCT----ATTT
TTATGTACACGAAAGCATGCCCTATCTCTATGTGATAAGAACACGCGGCTGTGCTCAGTTACGCAGAAGGCCGGGTGTGA
ACTCATCATGCTTATTATTACCGCGATGCTCATTATGATTTATGAGTCAATAAAAGTGCCCTCTATCAT-AATAAAATGT
GATAAGGCACATGTGTTTTCTTTTACAGTGATGTGATAAGGCACATGTTTGATGGTTACTGTTTGACATTTTGAACATGA
AATTGGCTTTGGCCTCGTCTAACCATATACTAATGGGCTACACGGTAGCTCTTGATGGAATCTGATACAGCTATTTACTT
CTAAGATTCCAGGAGTAACATACACGTCTGTCCAACCACATGGAGCTCACCTGTATAGTAATATAAAGCTTACATCTCCA
TTTCGATAATACTAATGCAGATAAGGAAGCATCAGCATCTAGCAGTTTTAAAAATTGATCTAGGATACATAGAACACTTT
TGTGGTTGTGATTTTGAGAAACTGTGATGCTCAGGGAATTTGGAGTCTGGAGGCAACAAAGGGGAGAAGGCCTTGGTGCA
CTCCGCCACCATTGCACTGCAGTCGCCGCTCCCAGAGTACAACGGTCGCTTCGAGTTTGGCCCGGGTCCTTCCATGGTAT
GCTTTTCGATTACTGCTA--TTATGTTGAAAATATGGTTGGAATGTGTCCCAACTTTTCAGCTGAAATTTTGTTTCTGGA
TGTCTCCACTTTTCAGCTGCTAACTTACCACATGTGTTTCAGATGTCTTCTGGTTATCCTTCAGCTGACCAGTGCTATGG
CCTACTTACCACTTACGCAATGAAATCGACGGTAAGCTTTGGTGTGTATTGTGTGCTCTATTTTGGACGCCTTTTTTTTT
CTATGATACTATTCTCTAACGCCTTCC----TTTTTCTGTTCATCGTAGCCTGGTAGCCGGTTGCTCTTGCCACTGAATG
CAACAGCTGACGCGCCGATTTACGTGAATGCAAAGCAGTATGAAGGGATCCTTCGCCGCCGCCGTGCTCGTGCCAAGGTG
GAGCGAGAGAATCAGCTGGTGAAAGGAAGAAAGGTAAGCCAGCACTTCCACCA---AGTCCATCTCATTTACAGAGACTG
GGAAAAACAAACCTCTTCCATTTGCTAACAAAAAAACACACGTCACTCAACATTTCATTCAAATATTCTCATTGCCGCTT
ATGA---------------------------------------------TCATCTTTTGAAACGGAGGCAAAAGATTGAC
CTTATCGATTATGATCATGGCGCAGCCGTATCTTCACGAATCACGCCACCGCCACGCGATGCGCCGGGCGAGGGGCACGG
GAGGGCGCTTCCTCAACACGAAGAAAGAGGGGGATGGCAAGGACGCTCCCGGAGGAGGCAAGCGGGCAGACTGCACCCCA
CCCACGCGCTTCGCCACGTCCCCGAGCTCCGTCATCCCG---------CACTCCCGGAGCAGCATCTCGAGCCTCTCCGG
CTCGGAGGTGTCGAGCATGTACGACCACGACGACGTGGACCACTACAACAGCATCGAGCACCTCCGGACCCCCTTCTTCA
CCCCGCTGCCGATCATCATGGATGGCGAGCACGGGGCCTCCGCCCCCTTCAAGTGGGCCACGGCCGCCGACGGCTGCTGT
GAGCTCCTCAAGGCGTGACTTGA-GGGGGGTATACGCAGGCACCCAGATCAAGAGCCGGCCATGGCCGGCTCTGGCTCCG
TCTGGTTGTCTGCAGGCAAATCATTCTTGGCTCTACTGCATTGGGGTGTCCTTCCACATCGCACTACCTCTTCCCTGAAA
ACTCCGGTGCTGGTTTCCAGGGATCTTGTGATGATGGGGCTCCCCATATGCCTGTAAAATAGTATCGGAAGCACTAGCAG
TGTACTACGGGTATGAACTCTATGGTATCAGGTGGTATCTGTG----T-------CAGAATAAGTATCAAACTTCAGGGT
CTTGTGATGTATTA---GGGTCTGAAACTTTTGTGCTCTTGGCAATGTACTGGAGTAAGTTGGAGTTTGTTTG---TTTG
TTTGTTTTAGATAAGTTTTAAGACATAAAATCTATTGTACTCGCAAATATATGATTTGTAAGCTTGTCTGCACAATAATT
AGAAATGTTACCAGTTTGTCAAATATTCTTGCAATCTTTTTACAGCTTGATAGGCATTGGA-ATTGTTCCTCGGTTCACT
GGCAAATAAACACACAACACCA-TTTTTTTAACAATTATAAAACCCTTGCAGGGGGAAAAACTACGTGCACGGCTGCGAT
CTTCATGTATCATTCAGACACCTCTGAATTCAAACTCCAACCTAGACTTCCCAGTGATTCGGTCTTCCTAGTGA------
-----------TTCAGTATGCAGATGATACAATTTTAACCCTTCCTGCCATTCAAAGCCAACTTGAGCAAGTGGATAATC
TGCTGAAGCATTTTGCTGCACAAGCAGGGTTGAAAATAAATTTCCACAAATCCAC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------CATGATACACATCAATGTGGAGGAGTTCTTTACACAACTTCTTAATAC
CCTAGGATGCAAAAGAGGTAGCTTTCCATTTACATATCTAGGGCTCCCCCTAAGTGCCAGCAGACTCAGGATTGAAGATT
TCACCCCAATCTATCAACAAATTGAAAGAAGGCTGGAAGGATGCTCAACCATGCTTTCATATAATGGAAAATTTCTTCTC
ATTAAATATGTTTTTTGCCAATCTTTTTCATGAGCACCCTTGCACTTCCTACCTCAGTTACCAGCCAGATCAACTAGTAT
TTAAGAAACTTCCTATGGAGAAAGTATGGTCATCAGATTGTTGGACATGCCCTTA-------------------------
--------------------------------------------------------------------------------
-------------
>SNPs
SSSSSSSSSS--------S-----------------------------------------S-S------------S----
-S-------------------------S----------------S------S-----------------SSSSSSSSS--
--------------------------------------------SS----------------------------------
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------------------------S---S---------SSSSS---------S--------S------------------
-------------S---------------------------------------S--------S---------------S-
-------S----------S-------------------------------------------------------------
------------------------------------S----------S------------------------S-------
-----------------------------------------------S--------------------------------
-------------------------------------------S---S------S---------------------SS--
--SS---S----------SSSSSS---S-----------S-S--------S-----S-----------------------
--------------------------------------------------------------------------------
-----------------S----S---S------------------------------------------S----------
-------------------------------S------------------------------------------------
---------------------S-----------S------------------S---------------------------
---------------SS-----------------S---------------------------------------------
------------------------------------S-S-----------------------------------------
----------------------------------S------------S--------------------------------
----------SSS-------------------------------------------------------------------
----------------------SSS-S-SSSSSSS----------S-----------------S----------------
-------------------------------------------S------------S-----------------------
------------------------------------------------------------SS------S-----S-----
---------------------------SS-----------------SS-S------------------------SSS---
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------SS------------------S--
-----S------------------S-----------------------------------------------SSSS----
-----------------------------------------------------------------S--------------
-------S---------------------S--------------------------------S-----SS----S-----
-S-------------S----------------------------------------------------------------
---------------------------------------------------------------------------S----
-S------------------------------------------------------------------------------
------------------------------------------------S---------------S------S--------
--------S------------------------------------------------------------S--S-------
--------------------------------------------------------------------------------
------------------SS-------S------------------------------------------------S---
-----------------------------------------------------------------S--S-----------
---------------------------S-------------------S------------------SS------------
-----------------------SS-SSSSS-----S----SS-------------------------------------
-------------------------------S------------------------------------------------
-----------------------------------------------------SSS-------S-------------SS-
------------------------------------------------------------------------S-------
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------
--------------------------------------------------------------------------------
-------------S-----S------------S--------------SSS--------------------S---------
--------------------S------------------SSSSSSSSS--------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
-----------------------------SSS------------------------------------------------
---------------------------------------------------------S-----S--------------S-
---------------S----------------------------------------------------------------
---------------------S-----SS-SSS---------------SSSSSSS-------------------------
------S-----------------------------S----------------S--------------S-S-SSSS----
---------------S----------------------S---------------------------------S-------
------------S------SSS-----SS----------------------SS-SSS-S-SS------------------
-S--------S-----------S---S---------------------S-------------------------------
----------------S---------------------------------------------------------------
----------------------------------------------S--S------------------------------
----------------S-------------------S-------------------------------------------
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----------------------------------------S----------S-----------S----------------
---S--------------------------------------------------------S--S----------------
--------------S-----------------S---S------------------------SS------S--------S-
-S-----S----------------S------------------------SS-S---------------------S-----
--S-------------------------------S--------------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS
>forward_2559
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-----------------------------------------------------------GATAGATTCCCCTCTCCGCG-
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>reverse_3664
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---------------------------------------------------------------CGCTTCTTTGGATCTGT
GCA-----------------------------------------------------------------------------
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>forward_3629
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---------CCTCCTTGCTAGCAGCTTGT---------------------------------------------------
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>reverse_5480
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---------------------------------------TCGATTATGGTCATGGCGCA---------------------
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>forward_5446
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------------------------------------------------------------------TCTCATCGCCGCTT
ATGACC--------------------------------------------------------------------------
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>reverse_6529
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------------------------------------------------CCAGGGGAAAAACAACGTGC------------
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-------------
