>input_sequence_27482
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-------------------------------------------TCCGTCCCACTTCCTCCTCCCTCTCGATTCCGATCGG
AATCGCAACTAGCTCCGCCGCTTGATTAGCCGGCAGCC-------------CCGTCCCCATGGCGTCCAAGCGGATCCTC
AAGGAGCTCAAGGACCTGCAGAGGGATCCCCCCACCTCCTGCAGCGCCGGTAATTTCTGCCGCCAGATCTACTTATTTAT
TACCAGCTAGCTCTACTTATTTACCACCAACCCCC-GGAAGATCCCTCGTCCCGGTGACAGATGCATGTGTGATGATTTG
TCGTTTTCGTGGCCTCGTTGCTAGATATATGTATCTCGATTAATTAAGAAGATCTACTTATTTGCTAGACACATGCT---
------------GCTTTTGGAAATTCCTGTGTAGAACCGTTAGAAATTGCAGTAACCGGCGGGGATCTGAAAGGGAGGGC
AAACCGTTGTGGAGC--AAATTGGTCGCCGGATATCCCATGCTCATGAGCCAATACAGTTAGCCTACTGGCACACATAAA
ATGGTAGTTGTACTGTTCCTGAAGGAAAAACATTGGCAGTGGACCAAACACCTACTGCAAATAGTCATGCTAGCCTACCA
ATTA--CAACGGTTTGGCAAAAATTCCTCTAGCTACCGATAGGCACTAAAAATGGTTACTACTGTTGTGATGTAACCTAC
AGTTTCTTCATTTCTTCCATTTCTGGACTCCCGGTTTAACATTGTACTTTCCCCCTTTTGAACACGTAATCAGTCATTGC
ATTGTCATTATTACATATTGAT---GGTTGTTCTTGGGTGGACGCT----CAAG----------------CAGCATTCCA
GAACATCCTAACCTCTGGAGTA--CATGACTACGCATGCGTGTAGTCAAGCATTCCTGAACTGCTAAACTTTGCTACTA-
--------------------ATAATGTGTTGTAACCGTGCCTTTATCGAAAATGTCACACTTGCCTACCATTTTACCAAT
GGTACGGCAAAAATGCTTCTAGCTGCTGATAGGCACTAAAAATGATCAGGGCAGTTTTGATATAATCTACAGTTATTAAT
TCTTACGCTGTTATGCATCTGGACTCCCTGTTTAAAGTAGTAGTTTCGCCGTTTTGAACAAGTAATCACTCGCTACATCA
TTACATGTTGATG----GGATAAAAAACACTTGAGGTTATGTGTAGTGAGTAGTTCATGTCTGGATGCGTGGGGTACCCA
TGAATATGCATGGTCGTAGTCAAGC--------ATTGCTGACCATCCTAACCTTGAAAGTTCTTCTGTGGTGGTCTGCTA
AGCTTTGCTAGTAATGTGTTGTCACTGTCCTCTTGTTGAAGTATCATTGCTTAGCCCATTGCGTGCAATAGCACTATGGG
AATTTATATTGAGGTTCCATTGTGTGACTAAAACATCTGGTTTTCACGGAACAGGCCCTGTGGCGGAAGATATGTTCCAC
TGGCAAGCGACGATCATGGGTCCATCGGAAAGCCCATATGCTGGTGGTGTATTTTTGGTTACTATTCACTTCCCCCCAGA
CTACCCATTCAAGCCACCCAAGGTATGCAGTCG-----------AGTGTATGCAACGATCTGAAATTATTCCTAGGATGA
TACAGGAGTGCTGCCTTTTCAACTCTCTAGCTTTTTGAGGTTTCCCAAAGCCCTGTTATAAGAAACTTCCTTGCCAACGT
CTTGCATTAATTCTCATCAAATTTTTG-ATTCAAGCTTAAATACTACTGCCAGCCTATCAGACAAAACTGTAAAGTTGTC
TAGCCCAGAGTCAGGGGAATGGTTCATCTATTAGCATATCCCTTCTATGTTTGTGTGTCGATCACTGGACCTG--TATAT
CAAAAGCTAGTATTA-----------------------------------------------------TCACAACTCCTG
TCCTTTGCGTGTACAGTGGATGATTCTTGCATGATGCATGCTCTAGTAAAGTTGTGATGATCAAATTGTGCTTATTGAAA
---------------------------AAATGCTCTAGTATGATAATTGAGATGCATGTTACATAACAATGATTACTTCC
ATGTGGTGGAAAGGTTGACTAGGAGAGGGTTTCATGTTATTTTTCTGTTCCATGCTAGTACTTGTA-----GATAAAATA
TTTGTGCTATAGCAATGATCTAAGTAGTTGCAACTGCTTTGCCAAATGTCTTTTAACATTTCAAGTAAATCTGAAATGCT
TGTCTTGAGCTCCGCATTCCCTCTAGCTAAATTATGATGGAAACAATTTTCCAGGTTGCATTTAAAACAAAGGTTTTCCA
CCCAAATATCAACAGCAATGGGAGCATCTGTCTTGATATCTTGAAGGAGCAATGGAGCCCTGCATTGACAGTTTCAAAGG
TGACACAATTCTTTCTTTTCATGGTTTTGTAACAAACTCGGTCGTGAATGT-------GATGCCTGTCATTGAGCTGGAG
TTCCAGCAGTTTTAATTCTTACAGCTTAGCCAAAGCATGTTAAAATTAAACTATCTGTGCAGTAACCTTGCAGCAGCATT
CGTTCTCCGGTTG-CACGTTTATCTGACAAGCCCCTATTTCCAGGTGCTCCTTTCAATCTGCTCTCTACTAACGGACCCA
AACCCCGACGACCCGTTGGTTCCGGAGATTGCACACATGTACAAGAGCGACCGTGCGAAGTATGAGTCCACAGCGAGGAG
CTGGACCCAGAAGTATGCAATGGGCTGACCCTGG-AGCCGCGCTTGGAGGATGATGTTGGGGCCATCTTCGCTTGTTACA
CCTAATGTATCTTTGTTCCTGTTCTGCTGCTGCTATATGGGATTGTACTGTCCACCTACCTGACTGAATTCAAGTGTCAT
ATTGTGAAGTGATGGCAGAAGGCCTCT-ATGGGTCTATGGGTGCACCCATCCAACAAATTAATAGAGATGGGAACCGAAA
CTAAAGTTGTTCCGTTGCTTG-----------------------------------------------------------
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-------------------------------------------------------------------
>chr7D_1_TraesCS7D01G335800
CTATACCCCGGTGTTCGCAGAACTGCCCCGCGTCAAGACCTCTCTGGTACATTGGCCGAGCCCTCGTGTATCCTAGACCG
GCGCATGATGAAGCATGGCGATGCGCCGGTAGTCCAGCTCAAGGTTCAGAGCACCGGATCTCCCGACACAACGACGTAGG
AAGACTACGAGGTTCTGTGCTAGCGCTATCCGGCGGCTCCAATTTGGGTGGAAGACGAAGCTGCTTAAGGAGGGGAGAGT
GTCACACCTAACCAACCCATGGTCAGTGTGACACGGCACATCCGACGTGTGGAACTCGCGTGTGCGTGCGAGTTAAAAAG
GGGTCGCCTGTGGCCGAGCGAGACATGCCTGGTGAACTTTCTTTCTATAACCTAAACTTTCCTCTACAATCCCAACCTCC
TTCCTCTCCAAGCCTCATCCCCCTTCTGCTCCTCTCACCTACTCCAGATCGACGATCTCCATCATCCCCGGTCCGTTACA
GAGGAATACAGGCAACAAGTATTTGCCACTGTGATCCACGCCCGCCTCCTTCCGACATGAAGAAATATGGAACTGATCGG
TATCTAGGGTACTTTGGCGGTGGCTCCGCCGGAGGATATTTGGGACCAAGGGAAACCCTAGAGGAAAAAAACCCAGTGCT
AGTGGCATGTGGTCGAGCAAGAAAAAGAAAAAAAGAGGCCGGACCCAGG--AAAAGCTAGGGAAAAGAAGGAGAACCAGA
CGCGTCGCCGACCCGTTTCCCC-ACACCCTCCCCTCTCTCGCGGGGAAAGCCGCGTCCGTCTAACGCGACCGACCGCGCA
CCCGGCCACCGTAGCCAGCCAGCAGTGTGGCCTGGCCGCCAGTACGCAATACCGCGTGCTCCACCCAGGCCGGAAGCTTC
CGGAGACCGCCCTGCGTGCCGTGACCATCCTCCGCTCCAACCCAACCCAATCTCCTCTCCTCTCCTCCGCACGCCATCCC
TCCCCGACTACTTATACGCGCTCCCCGTCGATCTATTCCCCACTCCGTCCCACTTCCTCCTCCCTCTCGATTCCGATCGG
AATCGCAACTAGCTCCGCCGCTTGATTAGCCGGCAGCC-------------CCGTCCCCATGGCGTCCAAGCGGATCCTC
AAGGAGCTCAAGGACCTGCAGAGGGATCCCCCCACCTCCTGCAGCGCCGGTAATTTCTGCCGCCAGATCTACTTATTTAT
TACCAGCTAGCTCTACTTATTTACCACCAACCCCC-GGAAGATCCCTCGTCCCGGTGACAGATGCATGTGTGATGATTTG
TCGTTTTCGTGGCCTCGTTGCTAGATATATGTATCTCGATTAATTAAGAAGATCTACTTATTTGCTAGACACATGCT---
------------GCTTTTGGAAATTCCTGTGTAGAACCGTTAGAAATTGCAGTAACCGGCGGGGATCTGAAAGGGAGGGC
AAACCGTTGTGGAGC--AAATTGGTCGCCGGATATCCCATGCTCATGAGCCAATACAGTTAGCCTACTGGCACACATAAA
ATGGTAGTTGTACTGTTCCTGAAGGAAAAACATTGGCAGTGGACCAAACACCTACTGCAAATAGTCATGCTAGCCTACCA
ATTA--CAACGGTTTGGCAAAAATTCCTCTAGCTACCGATAGGCACTAAAAATGGTTACTACTGTTGTGATGTAACCTAC
AGTTTCTTCATTTCTTCCATTTCTGGACTCCCGGTTTAACATTGTACTTTCCCCCTTTTGAACACGTAATCAGTCATTGC
ATTGTCATTATTACATATTGAT---GGTTGTTCTTGGGTGGACGCT----CAAG----------------CAGCATTCCA
GAACATCCTAACCTCTGGAGTA--CATGACTACGCATGCGTGTAGTCAAGCATTCCTGAACTGCTAAACTTTGCTACTA-
--------------------ATAATGTGTTGTAACCGTGCCTTTATCGAAAATGTCACACTTGCCTACCATTTTACCAAT
GGTACGGCAAAAATGCTTCTAGCTGCTGATAGGCACTAAAAATGATCAGGGCAGTTTTGATATAATCTACAGTTATTAAT
TCTTACGCTGTTATGCATCTGGACTCCCTGTTTAAAGTAGTAGTTTCGCCGTTTTGAACAAGTAATCACTCGCTACATCA
TTACATGTTGATG----GGATAAAAAACACTTGAGGTTATGTGTAGTGAGTAGTTCATGTCTGGATGCGTGGGGTACCCA
TGAATATGCATGGTCGTAGTCAAGC--------ATTGCTGACCATCCTAACCTTGAAAGTTCTTCTGTGGTGGTCTGCTA
AGCTTTGCTAGTAATGTGTTGTCACTGTCCTCTTGTTGAAGTATCATTGCTTAGCCCATTGCGTGCAATAGCACTATGGG
AATTTATATTGAGGTTCCATTGTGTGACTAAAACATCTGGTTTTCACGGAACAGGCCCTGTGGCGGAAGATATGTTCCAC
TGGCAAGCGACGATCATGGGTCCATCGGAAAGCCCATATGCTGGTGGTGTATTTTTGGTTACTATTCACTTCCCCCCAGA
CTACCCATTCAAGCCACCCAAGGTATGCAGTCG-----------AGTGTATGCAACGATCTGAAATTATTCCTAGGATGA
TACAGGAGTGCTGCCTTTTCAACTCTCTAGCTTTTTGAGGTTTCCCAAAGCCCTGTTATAAGAAACTTCCTTGCCAACGT
CTTGCATTAATTCTCATCAAATTTTTG-ATTCAAGCTTAAATACTACTGCCAGCCTATCAGACAAAACTGTAAAGTTGTC
TAGCCCAGAGTCAGGGGAATGGTTCATCTATTAGCATATCCCTTCTATGTTTGTGTGTCGATCACTGGACCTG--TATAT
CAAAAGCTAGTATTA-----------------------------------------------------TCACAACTCCTG
TCCTTTGCGTGTACAGTGGATGATTCTTGCATGATGCATGCTCTAGTAAAGTTGTGATGATCAAATTGTGCTTATTGAAA
---------------------------AAATGCTCTAGTATGATAATTGAGATGCATGTTACATAACAATGATTACTTCC
ATGTGGTGGAAAGGTTGACTAGGAGAGGGTTTCATGTTATTTTTCTGTTCCATGCTAGTACTTGTA-----GATAAAATA
TTTGTGCTATAGCAATGATCTAAGTAGTTGCAACTGCTTTGCCAAATGTCTTTTAACATTTCAAGTAAATCTGAAATGCT
TGTCTTGAGCTCCGCATTCCCTCTAGCTAAATTATGATGGAAACAATTTTCCAGGTTGCATTTAAAACAAAGGTTTTCCA
CCCAAATATCAACAGCAATGGGAGCATCTGTCTTGATATCTTGAAGGAGCAATGGAGCCCTGCATTGACAGTTTCAAAGG
TGACACAATTCTTTCTTTTCATGGTTTTGTAACAAACTCGGTCGTGAATGT-------GATGCCTGTCATTGAGCTGGAG
TTCCAGCAGTTTTAATTCTTACAGCTTAGCCAAAGCATGTTAAAATTAAACTATCTGTGCAGTAACCTTGCAGCAGCATT
CGTTCTCCGGTTG-CACGTTTATCTGACAAGCCCCTATTTCCAGGTGCTCCTTTCAATCTGCTCTCTACTAACGGACCCA
AACCCCGACGACCCGTTGGTTCCGGAGATTGCACACATGTACAAGAGCGACCGTGCGAAGTATGAGTCCACAGCGAGGAG
CTGGACCCAGAAGTATGCAATGGGCTGACCCTGG-AGCCGCGCTTGGAGGATGATGTTGGGGCCATCTTCGCTTGTTACA
CCTAATGTATCTTTGTTCCTGTTCTGCTGCTGCTATATGGGATTGTACTGTCCACCTACCTGACTGAATTCAAGTGTCAT
ATTGTGAAGTGATGGCAGAAGGCCTCT-ATGGGTCTATGGGTGCACCCATCCAACAAATTAATAGAGATGGGAACCGAAA
CTAAAGTTGTTCCGTTGCTTGACCTGATTGGTGTCCTCGTAT--TT-GTCTCTTATTTACTGG---ATGTTTCTGGATGC
TACGGACAAATTGGCGTACGGCCGCCCCTGATTTCGCCAACGAATTGGCGTACAAGCACAGAGGAAAAGATGGGTTCAGT
TGGCGAGCCAAAACGTTGGAACCAATCCAAACAAGCTGCGGTGTCCTGGTCAACGCCAATAATAATATTGGCTGGGCGTG
CCGCTGATCCAATCCAAACAGCCCCCAACACTTTTGCCCATTCAACGACTGTCAAGTAAAGTGTCTCTATTGGTCCGGAT
GTCCGAAATCTTGCAAACCAGCATCAACCCTGGGGGAAATTTTGTGAGTCGGACATCTGCCATGTCGGACTCTGACAACC
ATGTCGGACTCTGACAACACGGACCCAGAATGTCGGAAATCTTGCAAACAGCACCCTAGGGGAGATTTAGAGGAGCCCGG
ACGTTCGTACTCTGACGAGACTGACCCACCCAAAACTCCTCTTCGTGTCTCAAGAAACCCTCGGTGCATTCAGGGTGGAC
GTGATTGGCGTGGAACCGAGGAAGCCTACTCCGGCGCTCTACATTCAACCCGCCGCTCTGCCTGCTCCGGCTGTTTAAGC
CAGCCGGCCATGCCTTAGTACCCTACCCCTTCGAGCCCTTGGCCCATCGTCCGAGCTGCTGTCGAACTACCCCTTCTCAC
CCCGTCCGAGCCCTTCGCATCCTCGCTCGTTAGTGATAGCAATGGCTAGAACCGCTCGTTCGTGGTTGAGGAAGCTCTCG
CCAGGGTGCCATGTGGAAATCATGGCGAAGGTATGCGCCGCGGATGATTGGCGGTAGGCCTGCATTGTCTCCGAGCTCTC
CAGAGATGAGCTCTGAGGAGAAGGAGGATGGCGATCCCATGGTCATGGCCGAGATCGCGATGGAGGAGGCGGATGAGGAG
CCGGTGCTCGCGTTGGTGGAGCCACTAGTGATCAGGTTCAGCCTACTGCAGGCTGAGCAACACTACA
>chr7B_590
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--------------------------------------------------------------------------------
-----------------------------CGGAGGATATTTGCGACTAAGGGAAACCCTAGAGGAAAAAAACCTATTGCC
AATGGCTTGTGCTCGAGCAAG---AAAAAAAAAAGAGGCCGGACCCAGG--AAAAGCTAGGGAAAAGAAGGAGAACCAAA
CGCATTGCCGACCCGTTTTCCCCGCACCCTCCCCGCCCTCGCGGGGAAAGCCGCGTCCGTCTAACGCGACCGACCGCGCA
CCCGGCCACCGTAGCCAGCCAGCACT-----CTGGTCGCCCGTACGCAATACCGCGTGCTCCACCCAGGCCGGAAGCTTC
CGGAGACCGCCCTGCGTGCCGTGACCATCCTCCGCTCCAACCCAACCCAATCTCCTCCCCTCTCCTCCGCACGCCACCCC
TCCCCGACTACATATACGCGCTCCCCGTCGATCTATTCCCCACTCCGTCCCA----CTCCTTCCTCTCGATTCCGATCGG
AATCGCAACTAGCCCCGCCGCTTGATTAGCCGGCAGCCGGCC---------CCGTCCCCATGGCGTCCAAGCGGATCCTC
AAGGAGCTCAAGGACCTGCAGAGGGATCCCCCCACCTCCTGCAGCGCCGGTAATTTCTGCCGCCAGATCTACTTATTTAT
TACCAGCTAGCTCTACTTATTTACCACCACCCCCC-GGAAGATCCCT-----CGGTGACAGATGCATGTGTGATGATTTG
TCGTTTTCGTGGGCTCGTTCCTAGATATATGCACCTCGATTAATTAAGAAGATCTACTTATTTGCTAGATATATGCT---
------------GCTTTTGGGAATTTCTGTGTAGAACCGGTAGAAATTGCAGTAACCGGCGAGGATCTGAAAGGGAGGGC
AAACCGTTGGTGGAGCAAATTTGGTCGCTGGATATCCCATGCTCACGAGCCAATACACTTAGCCTACTGGCACACATAAA
ATGGTAGTTGTACTGTTCCTGAAGGAAAAACATTGGCAGTGGACCAAACACCTACTGCAAATAGTCACGCTCGCCTACCA
ATCCACCAACGGTTTGGCAAAAATTCCCATAGCTACCAATAGACACTAAAAATGGTCACGACTGTTCTGATGTAATCTAC
AGTTTCTTCATTTCTGTCGTATCTGGACTCCCGGTTTAACATAGCAATTTCCCCCTTTTGAGCACGTAATCAGTCATTAC
ATTGTCATTATTACATATTGATGATGGTTGTGCTTGCGTGGATGCTTATGCAAG----------------CAGCATTCCA
GAACATCCTAACCTCTGGGGTA-CCATGACTACGCATGCATGTAGTCAAGCATTCCTGAACT--------TTGCTGCTA-
--------------------ATAATGTGTTGTAACCGTGCCTTTATCGAAAATGTCACACTTGCCTACCAATTTACCAAC
GGTAAGGCAAAATTGCTTCTAGCTGCTGATAGGCACTAAAAATGGTCAGGGCAGTTTTGATATAATCTACAGTTATTCAT
TCTTATGCTGTTATGCATCTGGAATCCCTGTTTAAAGTAGTAGTTTCCCCATTTTGAACTAGTAATCACTCACTACATCA
TTACATGTTGATGGG-----AAAAAAACACTTGAGGTTATCTGTAGTGAGTAGTTCATGTGTGGATGCGTGGGGTACCCA
TGAATATGCATGGTCGTAGTTGAGGTTTTCTGTATTGCTGACCATCCTAACCTTGAAAGTTCTTCTGTGGTGGTCTGCTA
AGCTTTGCTAGTAATGTGTTGTTACCGTCCTCTTGTTGAAGTATCATTGCTTAGCCCATTGCGTGCAATAGCACTATGGG
AATTTATATTGAGGTTCCATTGTGTGACTAAAACATCTGGTTTTCACTGAACAGGCCCTGTGGCGGAAGATATGTTCCAC
TGGCAGGCGACAATCATGGGTCCATCGGAAAGCCCATATGCTGGTGGTGTATTTTTGGTTACTATTCACTTCCCCCCAGA
CTACCCATTCAAGCCACCCAAGGTATGCAGTCG-----------AGTGTATGCAACGATCTGAAATTATTCCTAGGATGA
TACAGGAGTGC---CTTTTCAA--CTCTAGCTTTTTGAGATTTCCCAAAGCCCTGTTAGAAGAAACTTCCTTGCCAACGT
CTTGCATTAATTCTCATCAAATTTTTG-ATTCAAGCTTAATTACTACTGTCAGACTATCAGAC-AAACTGTAAAGTTGTC
TAGCCCAGAGTCAGTTGAATGGTTCATCTATTAGCATGTCCCTTCTATGTTTGTGTGTCAATCACTGGACCTGTATATAT
CAAAAGCTAGTATT------------------------------------------------------TCACAACTCCTG
TCCTTTGTGTGTACAGCGGATGATTCTTGCATGATGCATGTTCTAGTAAAGTTGTGATGATCGAGTTGTGCTTATTGGAA
---------------------------AGATACTCTAGTATGATAATTGAGATGCATGTTACATAACAATGATTACTTCC
ATGTGGTGGAAAGGTTGACTAGGAGAGGGTTTCATGTTATTTTTCTGTTCCATGCTAGCACATGTA-----GATAAAATA
TTTGTGCTATAGCAATGATCTAAGTAGTTGCAACTGCTTTGCCAAATGTCTTTCAACATTTCAGGTAAATCTGAAATGCT
TGTCTTGAGCTCCGCATTTCCTCTAGCTAAATTATGATGGAAACAATTTTCCAGGTTGCATTTAAAACAAAGGTTTTCCA
CCCAAATATCAACAGCAATGGGAGCATCTGTCTTGATATCTTGAAGGAGCAATGGAGCCCTGCATTGACAGTTTCAAAGG
TGACACAATTCTTCCTTCTCATGGTTTTCTAACAAACTCGGTGGTGAACGT-------GATACCTGTCATTGAGCTGGAG
TTCCAGCAGTTTTAATTCTTACAGCTTAGCCAAAGCATGTCAAAGTTAAACTATCTGTGCAGTAACCTTGCAGCAGCATT
CGTTCTCTAGTTGCCACGTTTATCTGACAAGCCCCTATTTCCAGGTGCTCCTTTCAATCTGCTCTCTACTAACGGACCCA
AACCCTGACGACCCGTTGGTTCCGGAGATTGCACACATGTACAAGAGCGACCGTGCAAAGTATGAGTCCACAGCGAGGAG
CTGGACCCAGAAGTATGCAATGGGCTGACCCTGGTAGCCGCGGGTGGAGGATGATGTTGGAGCCATCTTCGCTTGTAACA
CCTAATGTATCTTTGTTCCTGTTCTGCTGCTGCTATATGGGATTGTACTGTCCACCT----GACTGAATTCAAGTGTCAT
ATTGTGAAGTGATGGCAAAAGGCCTCTAATGGGTCTATGGGTGCACCCATTCAACAAATTAATAGAGATGGGAACTGAAA
CTAAAGTTGTTCCGTTGCTTGACCTGATTGGTGTCCTCCTCGTATTTGTCCCTTATTTACTTCCATATGTTG-TGGATGC
TAC-----------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr7A_665
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------AAGAAAAAAAGAGGCCGGTCCCAGGGGAAAAGCAAGAGAAAAGAAGGAGAACCAAA
CGCGTCGCCGACCCGTTTCCCC-GCACCCTCCCC------------------GCGTCCGTCTAACGCGACCGACCGCGCA
CCCGGCCACCGTAG----CCAGCAGTGCGGCCTGGCCGCCAGTACGCAATACCGCGTGCTCCACCCAGGCCGGAAGCTTC
CGGAGACCGCCCTGCGTGCCGTGACCATCCTCCGCCCCAACCCAACCCAATCTCCTCCCCTCTA---CGCACGCCACCCC
TCCCCGACTACTTATACGCGCTCCCCGTCGATCTATTCCCCACTCCGCCCCACTTCCTCCCTCCTCTCGATTTCGATTGG
AATCGGAGCCAGCTCCGCTGCCTGATTAGCCGGCCGGCCCCGGCCCCGTCTCCGTCCCCATGGCGTCCAAGCGGATCCTC
AAGGAGCTCAAGGACCTGCAGAGGGATCCCCCCACCTCCTGCAGCGCCGGTAATTTTCGCCGCCAGATCTACTTATTTAT
TGCCAGCTAGCTCTACCTATTTACTGCCACTTTCATGGAAGATCCCT-----CGGTGACAGATGCATGTGTGATGATTTG
TCGTTTCCGTGGCCTCGTTGCTAGATATATGTATGTCGATTAATTGAGAGGATCTACTTATTTGCTAGAACTGTAGTCCC
GGGGAATCGAGCGCTTTTGGAAATTTCTGTGTATAGCCGGGAGAAATTGCGGTAACCAGTAAGGATCTCAAAGGGAGGGC
AAACCGTTGTGGACC--AAC-TGGTCGCTGGTCATCC--------TGAGCCGATACAGTTAGCCTACTGGCACACATAAA
ATGGTAGTTGTACTGTTCCTGCAAGAAAAACTGTGGCAATGGACCAAACACCTACTGCAAATAGTCATGCTCGCCT----
--------------------------------------------------------------------------------
-------TCATTTCTTTCGTATCTGTGCTCCCGGTTTAACATAGTAC-TTCCCCCTTTTGAACACGTAATCAGTAATTAC
ATTT------TTACATATGCTT---GGACGTGGATGCGTGGGGTACCCATTAATATGAAAAGTTTTAGTCCAGCATTCCA
TAACATGTTAGCCTGTGGGGCACCCATGAATACGCATGGTTGTAGTCAAGCATTCCTGAACGTCTTAACCTTGGAAGTAC
TTCCGTGGTAGTTTGCTAAGATAATGTGTTGTTACCGTACTGTTATCGAAG-TATCATACTTGGCTACCGATTTGTT---
-----GGCAAAATTTCTTCTAGCTGC--ATAGACACTAAAAATGATGAGGACTTCC-TGATATGATCGACAGTTACTCAT
TCTTACA-------GCATCTGGACTTCTGGTTTAACATAGTAGTTACCATC--TTGCACAAGTAGTCAATCATTACATCA
TTACATCTTGATGGAATGAAAACATAAACATTGGGGCTATCTGTAGTAAATAGTTCTTGCGTGAATGCGTGGGGTACCCC
TGAATATTCTTAAAA---------------------------CATTCTAACCTGGGAAGTACTTCTGTGGTAGTCTGCTA
TTGC-TAGTAATAATGTGTTGTTACCATGCTTTTTTTTGAAGTATCACAT------------------------TATGGC
AATTCAAATTGAGGCTCCAATGAGTGACTAAAACATATGG-TTTCACTGAACAGGCCCTGTGGCAGAAGATATGTTCCAC
TGGCAAGCAACGATCATGGGCCCATCGGAAAGCCCATATGCTGGTGGTGTATTTTTGGTTACTATTCACTTCCCCCCAGA
CTACCCATTCAAACCACCGAAGGTATGTAGTCAATATCACTTCCAGTGCATGCAATGTTCTGAAATCATTCCTAGGAGGA
TACAAGAGTGC---CTTCTCAATTCTGTACCTCTCTGAGCTTTCCCAAAGCCCTGATATAAGAAACTTCCTTGCCAGCGT
CGTGCAGAAATTCCCCTCATATTTGCCAATGCATGCTTAATTAGTCTGTCAGCCTGGT------AAAATGTAAAGTTGCT
TAGGCCAGAGACAGATGAATGGTTCATCTTTTAGCACCTCCCTTTTCTGTTTGCATCTT----ACTGGACCTG--TATAC
CAAAACATAGTACTAACTGGAGTATTAAGCTTGCCAAATTTTTGTCAATGCATGCTTAATTAGTCTTGTCACAATTCAAG
GCCTTGGCTTGTACTGTGGATGATTATTCC-----------------ATAATGGTGATGATCTAATTTATTTATTGAGAT
CATTAGAGAAGCTGCCAGCTAGGACATAACTGCTCTAGAATGGGAATTCAGATGCATGTTACATAACCATGAATACCTCT
CCTGCTTGTCACTT-------------------ATGTTGTTTTTCTGTTCCATGTTAATGTTCTTTGTCAGGATAAAGTA
TTTGTGCAGTAGCAATGGTCTAACTGGAGTATTAAGC-TTGCCAAATTTCTTTTAACAATTCATGTAAATCTGGAATACT
TATCTTGAGCTCCAAAG-CCATCTAGCTAAATTCTTATGGAAATAATTTTGCAGGTTGCATTTAAAACAAAGGTTTTCCA
CCCAAATATCAACAGCAATGGGAGCATCTGCCTTGATATCTTGAAGGAACAATGGAGCCCTGCATTGACAGTTTCAAAGG
TGACGTGATTC-TTCTTTTCATGGTTTTGTAACAAACCTGGTCATGCCAACCAAGAGCGATACCTGTCATTGAGCTGGAG
CTCCAGCAGTTTTAATTCTTATAGCTTAGACAAAGCATGTCAAAGTTAAACGCCCACCTT------------GCAGCATT
TGTTCTCCAGTTG-CACGTTTACCTGACAAGCCCCTATTTCCAGGTGCTCCTTTCAATCTGCTCTCTACTAACAGACCCG
AACCCCGACGACCCGTTGGTTCCGGAGATTGCACACATGTACAAGAGTGATCGTGCGAAGTATGAGTCCACAGCGAGGAG
CTGGACCCAGAAGTATGCAATGGGCTGACCTTGTGAGCCTA-GGTGGAGGATGATGTTGGAGCCATCTTCGCTTGTTACA
CCTAATGTATCTTTGTTCCTGTTCTGCTGCTGCTATATGGGATTGTACTGTCCACCTACCTGACTGAATTCAAGTGTCAT
ATTGTGAAGTGATGGCAGAAGGCCTCT-ATGGGTCTATGGGTGCACCCATCCAACAAATTAATAGAGATGGGAACTGAAA
CTAAAGTTGTTCCGTTGCTTGACCTGATTGGTGTCCTCGTCT--TTTCCCCCTTATTTACTGG---ATGTTG-TGAATGC
TAC-----------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S---S--------------------------S-S---S
-S----S----S---------SSS------------------------------------------------------S-
-----------------------S----------S-S-------------------------------------------
---------------------------S----------------------------------------------------
---------------------------------------------------------S------------------S---
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S-----------------SSSSS----------------------------
---------------------------------------------------------------------S-S--------
-------------------------S-------------S---------------------S------------------
-------------S-----S--------S---------------------------------------------------
-----------------------------------------------------------------------S--------
--SS-----------------------SS--------S----S-------------S--S------S--------S----
----------------S-S-S---------------------S-----------------------------------S-
-------------------------------S----S-----S-------------------------------------
------------------S--------------------S----------------------S--S---S----------
----------------------------------------------------------------------S--------S
----S-------S----------------------------------------------------------------S--
-----------------------------------------------S--S--------------------S--------
------------------S-S-------------------S-------------------S-------------------
--------------------SS--S-------------------------------------------------------
----------------------S--S------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------SSS--------S----------------S----------------------------------------
----------------------------------------S----------------------S----------------
--------------SS---------------------S---------------------S--------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------S--------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S------------S------------------
----------------------------------------S---S-----------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------SS----------------S-------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
----------------------------------------S---------S--------------------SS-------
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_192
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------------TTCTGTGCTAGCGCTATCCG------------------------------------------------
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>reverse_1697
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----------------CCATTTCTGGACTCCCGGTT--------------------------------------------
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>forward_358
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------------------CGAGACATGCCTGGTGAACT------------------------------------------
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>reverse_1792
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-------------------------------TCTTGGGTGGACGCTCAAG------------------------------
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>forward_428
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--------CAAGCCTCATCCCCCTTCTG----------------------------------------------------
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>reverse_2261
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--------------------CAAGCATTGCTGACCATCCT----------------------------------------
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>forward_583
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---CTAGGGTACTTTGGCGGTGG---------------------------------------------------------
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>reverse_2262
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---------------------AAGCATTGCTGACCATCCTAAC-------------------------------------
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>forward_1460
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GCAAACCGTTGTGGAGCAAA------------------------------------------------------------
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>reverse_3502
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-------------------------------------------------------------GCCTGTCATTGAGCTGGAG
T-------------------------------------------------------------------------------
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>forward_2663
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--CAGGAGTGCTGCCTTTTCAAC---------------------------------------------------------
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>reverse_4402
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-TGTCGGACTCTGACAACACG-----------------------------------------------------------
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-------------------------------------------------------------------
