>input_sequence_27471
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-------------------------------------------------ATGAGCGCGGTGAACTTAACGAACGTGGCGG
TGCTGAACAACCCCACCTCTTTCGTCAACCCCTTCCAGTTCGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTGTTTGGCGGGCGCTCGTTTCGATTTT
GTCA----------------------------------------------------------------------------
------------------------------------------------------------TGATTCATGGTTGTTCTTCC
GATTCGATTGCTGGATATGCGTGGCTGCTGAAATAGGGGTTGGAGCCTGCGGTTATTGCGGCTTGTATTCTAGGGTTTTA
GAGTCGTGGTGGAGCAGTTACTGTACTCGATTGGATTGAATAAGTTGCTCGGAATTGTGGATGGGTGTGATAGATTTACC
CTAGTTTGTGATTATTCCATTTTGACGAGTGAAGGGAATTATTAGATCATTTCCTTCTGCTTTGACAATGAAACAGAGCT
CTGAAAGCTATACAAGTTTTAGCAGAAAGTAGCAGAGGTTGGTCTGATAAGCTGCCTGTTATCATGATGTGTAGGGTCTC
AGCTGGTACTAGACCAATTTCCTCTGGGAAATGTATTGGCCTCTTACATTGAATTTGTCTAGTGTTAGATTCAGAATCCT
TCACTGCAACTGATTATATGAACATGGGATTACTGACATA--CAATTTAAGTGGTCTAGGGAGAAATACGTGTGTTTTTC
ATTTACTTTATTTGCAAAGTAAATGTCTTCTTCACCATGCAACATGTATATTGTGTGTAGATGCTACGCTGCTGCTATTC
TACTATGCAAGTGTGATGGGCTCTGGTTTGTGAATGTTAATCTTCAGTTTAAGAATCAATGATTTTGATTGATGATTGTT
AGGCTGTTGGATACAGTGTATTAAGTAGGGCCATACTATTAAGATATATTTGACTAGTCTACAGGTTCTTTCAGTTGAGT
TATCTAAAATTAAGGCGGTGATGATGAGTACAGTTTTCTGGAGCTTTACGTGTTTCATTATGTTCTATTTTGTTTATGAT
ACTTGCCGATAAACATATGATTCTATACTGATGCATATTTAACGCAAATCATGTATAGTTACAATCATGAAAAATGCACA
GGTTCTTGTATGAAATTGATACTACAGACTGAACAAAATAAGGATAATTTGTGAGTTGCCACTTTCCTGGTCTAGCAAAT
ATATA---------------------------------------------------------------------------
--------------------TTATACTTGGCATGTGCATCTACATCCCAGGAGATTGATTTGGATGTCAACATTTGATTA
GTTCCCTGTGTAAAAATCTATGGTTTATAGAATAGTTACGGGAATTCATGTTCATGC---ATCTCTGCTTACATTAGTGT
AGTGATGATGATCATGGGAAGACAACTCTTGATAATAGGATCATGATTGATATATTCTTATCTTGCCACTTGTTTATCGT
GGCACTTTTTTTTATCTTCTGTTTGGGCACAAGACATAGTTGTTGACCAATTTGCTGAAGCATTTGTTTTTACTAATCAA
TATTAATTGGGTGTCACATCAAATTGTCATTATGCCTTTGGTGACCATTTTCTTATCATTCTCACATTATTTTCTTCGTG
AATTAAGAATTACTGCTATTGTAG-AATGAGCTTCTTGATGTTTCTGTTTCTGTTTGGTATGTATTTATGCGCATGTGAG
GGCAGTGGACATTTTGTCCTTCTGATAATCTCCTT------TAATAATAACCCACACCTCCCCTTAATGTGAAGATGTGC
AAAACTTTCCATGACTA-AAAAAATAGCCGTTTTGCATCTGTATAGTTTTGACCTACTTAAATATTGAACCTACCATTTG
TTATGAGTACCATGAGTATAATGCTGTTCTTTTCCTGGCTGAGTCTGGTGAAGTACTAACAATGAGTTTGTTGGTCGGCC
TTCCAGATCTGGAGTGGAAGCTTATATATGTTGGATCAGCTGAAGATGAGAACTATGATCAGCAACTTGAGAGTGTGCTT
GTTGGCCCTGTGAATGTTGGGACATACCGTTTTGTTCTGGAGGTAAATAGGTTACTGATCTACGACTCTGTGAT--GCAT
CATGAACTCTGATATGAAAATGATGTTTTACAACTGCGCAGAGATCTGCCTATTCATATTACAGTTGGGCAGCTGCTTTG
CTCCTACCTCAGATTAAAATTTGTAACACCAGACTGATATGTCTGTTTTTTTGTTTTCAGGCCGACCCCCCTGATCCCTC
AAAGATCCGCGAGGAGGACATAATCGGGGTTACAGTGCTTTTGTTGACCTGTTCATACATGGGGCAGGAGTTCATCAGAG
TAGGCTACTACGTGAACAATGATTACGATGATGAGCAACTTAGGGAAGAACCCCCAGCGAAGCTGCTGATTGACCGGGTG
CAGAGAAATATTTTGACCGACAAGCCCCGAGTCACTAAGTTCCCCATCAATTTCCATCCCGAAACCAGCGGAGGACAGCA
GCAAGATCAGCCACAATCAGCTGTACCTGAAAACCAGACAAGCGAAGGGAGCAAGGCCAGCACAGATCTTTGA-------
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>chr3D_1_TraesCS3D01G265200
TTCAACATTTTTAATACTTATTCAACATTTTT-AAATACTTGCTCAATATTTTTCAAGTACTCGTTTAATAGTTTTTAAT
ACTTATTCAAGATTTTTTAAATAGTTTTTCAACATTTTTAAAACTTATTCAA-ATTTCCAAATACTTGTTCAACATTTTT
GAAATACTCGTTCAACATTTTTTAATACTGATTCAACATTTTTTTTAAAACTCGTTCAACATTTTTAATACTTATTCAAC
ATTTTTCCAAAAAAATTCAAAAAAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTGTTCAACATTTTTC-AATAATAGTTTAACATTTTTTACTACTTATTCAACATTTTTGAAATACTTTTTAAATAT
TTTTCAAATGTGTTTTTGAATTTTGTGTATATATATATTTTTTAAAGTATAAACAAAAGTACAAAGATAAAGCAAAAAAC
GAGAACAGAAAACAGAAGAAAAAA-AAGCAGGTCATGGCCTCCCGCTTGGCTGGGCCGGCCCATCTGGGGCTACCCGCGA
CGCGAGACTTCCCCCTGTCTCGCTTAAAGCGAGACATAGGGGCGCCCCTCAACATCGACAGTCACCGCTCAACAAAAAAA
ACCTCGACAGCCAGCAAGGAAGTACCGAAAGTACCCTTCTCTCTCCTCTGGGCTGTGTTCTCCACCCAAATCCAGCCAAA
ACCCCTCCCCCC--TCCTCTCGGTTCGGCGATCGGCGGCGG---CGGCGATGAGCGCGGTGAACTTAACGAACGTGGCGG
TGCTGAACAACCCCACCTCTTTCGTCAACCCCTTCCAGTTCGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTGTTTGGCGGGCGCTCGTTTCGATTTT
GTCA----------------------------------------------------------------------------
------------------------------------------------------------TGATTCATGGTTGTTCTTCC
GATTCGATTGCTGGATATGCGTGGCTGCTGAAATAGGGGTTGGAGCCTGCGGTTATTGCGGCTTGTATTCTAGGGTTTTA
GAGTCGTGGTGGAGCAGTTACTGTACTCGATTGGATTGAATAAGTTGCTCGGAATTGTGGATGGGTGTGATAGATTTACC
CTAGTTTGTGATTATTCCATTTTGACGAGTGAAGGGAATTATTAGATCATTTCCTTCTGCTTTGACAATGAAACAGAGCT
CTGAAAGCTATACAAGTTTTAGCAGAAAGTAGCAGAGGTTGGTCTGATAAGCTGCCTGTTATCATGATGTGTAGGGTCTC
AGCTGGTACTAGACCAATTTCCTCTGGGAAATGTATTGGCCTCTTACATTGAATTTGTCTAGTGTTAGATTCAGAATCCT
TCACTGCAACTGATTATATGAACATGGGATTACTGACATA--CAATTTAAGTGGTCTAGGGAGAAATACGTGTGTTTTTC
ATTTACTTTATTTGCAAAGTAAATGTCTTCTTCACCATGCAACATGTATATTGTGTGTAGATGCTACGCTGCTGCTATTC
TACTATGCAAGTGTGATGGGCTCTGGTTTGTGAATGTTAATCTTCAGTTTAAGAATCAATGATTTTGATTGATGATTGTT
AGGCTGTTGGATACAGTGTATTAAGTAGGGCCATACTATTAAGATATATTTGACTAGTCTACAGGTTCTTTCAGTTGAGT
TATCTAAAATTAAGGCGGTGATGATGAGTACAGTTTTCTGGAGCTTTACGTGTTTCATTATGTTCTATTTTGTTTATGAT
ACTTGCCGATAAACATATGATTCTATACTGATGCATATTTAACGCAAATCATGTATAGTTACAATCATGAAAAATGCACA
GGTTCTTGTATGAAATTGATACTACAGACTGAACAAAATAAGGATAATTTGTGAGTTGCCACTTTCCTGGTCTAGCAAAT
ATATA---------------------------------------------------------------------------
--------------------TTATACTTGGCATGTGCATCTACATCCCAGGAGATTGATTTGGATGTCAACATTTGATTA
GTTCCCTGTGTAAAAATCTATGGTTTATAGAATAGTTACGGGAATTCATGTTCATGC---ATCTCTGCTTACATTAGTGT
AGTGATGATGATCATGGGAAGACAACTCTTGATAATAGGATCATGATTGATATATTCTTATCTTGCCACTTGTTTATCGT
GGCACTTTTTTTTATCTTCTGTTTGGGCACAAGACATAGTTGTTGACCAATTTGCTGAAGCATTTGTTTTTACTAATCAA
TATTAATTGGGTGTCACATCAAATTGTCATTATGCCTTTGGTGACCATTTTCTTATCATTCTCACATTATTTTCTTCGTG
AATTAAGAATTACTGCTATTGTAG-AATGAGCTTCTTGATGTTTCTGTTTCTGTTTGGTATGTATTTATGCGCATGTGAG
GGCAGTGGACATTTTGTCCTTCTGATAATCTCCTT------TAATAATAACCCACACCTCCCCTTAATGTGAAGATGTGC
AAAACTTTCCATGACTA-AAAAAATAGCCGTTTTGCATCTGTATAGTTTTGACCTACTTAAATATTGAACCTACCATTTG
TTATGAGTACCATGAGTATAATGCTGTTCTTTTCCTGGCTGAGTCTGGTGAAGTACTAACAATGAGTTTGTTGGTCGGCC
TTCCAGATCTGGAGTGGAAGCTTATATATGTTGGATCAGCTGAAGATGAGAACTATGATCAGCAACTTGAGAGTGTGCTT
GTTGGCCCTGTGAATGTTGGGACATACCGTTTTGTTCTGGAGGTAAATAGGTTACTGATCTACGACTCTGTGAT--GCAT
CATGAACTCTGATATGAAAATGATGTTTTACAACTGCGCAGAGATCTGCCTATTCATATTACAGTTGGGCAGCTGCTTTG
CTCCTACCTCAGATTAAAATTTGTAACACCAGACTGATATGTCTGTTTTTTTGTTTTCAGGCCGACCCCCCTGATCCCTC
AAAGATCCGCGAGGAGGACATAATCGGGGTTACAGTGCTTTTGTTGACCTGTTCATACATGGGGCAGGAGTTCATCAGAG
TAGGCTACTACGTGAACAATGATTACGATGATGAGCAACTTAGGGAAGAACCCCCAGCGAAGCTGCTGATTGACCGGGTG
CAGAGAAATATTTTGACCGACAAGCCCCGAGTCACTAAGTTCCCCATCAATTTCCATCCCGAAACCAGCGGAGGACAGCA
GCAAGATCAGCCACAATCAGCTGTACCTGAAAACCAGACAAGCGAAGGGAGCAAGGCCAGCACAGATCTTTGACCTGGTC
TGGAAACTTGGGAATGCCAAAATTTTGATCTGCATGCCTTCTAGGTGAGATTGCAATATCAGATGGCTTCCTGGGATGCT
GCTGCTACCTGAACCGTCTGTTCTGGTGCGCCACTAAACTAGACTATAGCCAAAAACTCACATTGGTTAGCCATGTGCCT
GTGGTGGGTAGGTAAGGTTCTGACACACTGCGTCCTTTTGCTAGTGATGAACTGTAAGCTGGATGTTCATCCAGTGA---
TCCGGTGCAACCGTGGTTGTCTTGTCTCTTGGATTATGTCTGCAGTCGCAAGGGTTCGTTAGATGACTTTGGTCGCCCAT
AATCATGTTTTGGTCCACTCCTGTTAGCTATTTGTCGAAACCGGGCTGCCCCCTTTCCATTGGTCACGGAAATATTCAGT
TCGTACAGACCGAGAGATAGGAAAAGGGGAAGGAAGGGTAGCGAGTTCGAGTAATCCCGCTGGTAAGGGCTCGCCGTTGA
GAGTTGAGACGCCTACTACAGGGCAAAATGTCATTAACACTGCTGGTTGCTGTGTACAGAGAAAAGATGGTACATG----
---AAGGTGAAACAAAACATCCACTAGACATAG----------------------------------------GTTCCTG
TTAGCTATAGCTAGAGCACCAAAGTA---GAAATAGGTTCTGCTTTAAGTAGTCCAGCTGATCTCCACGA-CGCCCGTCA
CGCTCTATATTC--GACTGTTTGCGCAAGCGAGGGGGCTACTCCATCCAAGACGATCGCATTACGATGCTTCTATAGCTC
CCATAAGGCGTAATGCTTCTATAGCTCCCATAAGGTTAGCGTAATGATCGCCCTCAACTCCTTTTGTGGGCACCTATAGC
TTCCATAAGGTTAGCGTAGTGATTGCCCTCAACTCCTTTTGCGGGCACCTAGTTGAGCTTCTCGTGGTACACCACTCCAC
CAAAGTGTCGTCAAC----------------CGTTGGC----------GCGTCCCCATGGAGCTCCATAGCCAGAACCAA
ATCGTCCCTGCAAAGACGCAA-GCAAGTAGGATGTG
>chr3A_1
TTCAACATTTTTAATACTTATTCAACATTTTTCAAATACTTGTTCAATATTTTTCAAGTACTAGTTCAACAGTTTTTAAT
ACTTATTCAAGATTTTTTAAATACTTGTTCAACATTTTAAAAACTTATTCAACATTTCCAAATACTTGTTCAACATTTTT
CAGATACCCATTCAACATTTTTTAGTACTGATTCAACATTTTTTA-AAAACTTGTTCAACATTTCTAATACTTATTCAAC
ATTTTTTCAAATTTTTTTCAATTTTTTTAATATTTTTTCACATTTTCAAATATTTGTTCAACATTTATTATCAAATACTT
GTTCAACATTTGTAATGTTTATTCACATTTGCAAATATT-----------------------------------------
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-----TGTTCAACATTTTTAGAATAATAGTTT-ACATTTTTTAGTACTTATTCAACATTTTCCAAATACTTGTTCAATAT
TTTTCAAATGTGTTTTTAAATAGTGTGTATATATATA---TTTAAAGTATAAAGAAAAGTACAAAGATAAAGCAAAAAAC
TAGAACAGAAAACAGAAGAAAAAACAAACAGGTCATGGCGTCCCGCTCGGCTTGGCCGGCCCATCTGGGGCTACCCGCGA
CGCGAGACTTCCCCCCTGGGCGCCCCT----------------------CAACATCGACAGTCACCACTCAACAAAAAAA
ACCTCGACACCCAGCAAGGAAGTACCGAAAGTACCCTTCTCTCTCCTCTGGGCTCTGTTCTCCACCCAAATCCACCCAAA
ACCCCTCCCCCCCCTCCTTTCGGTTCGGCGATCGGCGGCGG---CGGCGATGAGCGCGGTAAACTTAACGAACGTGGCGG
TGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCCCGCCGCCGGCGCGAACTTCTCTGCT-------------------------------------
------------------------------------------------GCTCTTGTTTGGCGGGCGCTCGTTTCCATGTT
GTCA----------------------------------------------------------------------------
------------------------------------------------------------TGATTCATGGTTGTTCTTCC
GATTCGATTGCTGGATATGCGAGGCTGCTGAAGTAGGGGTTGGAGCCTGCGGTTATTGCGGCTTGTATTCTAGGGTTTTA
GAGTGGTGGTGGAGCAGTTACTGTACTCGATTGGATTGAGTAAGTTGCTCGGAATTGTGGATGGGTGTCCTAGATTTACC
CTAGTTTGTGATTAGTCCATTTTGACGAGTGAAGGGAATTATTAGATCATTTCCTTCTGCTTTGACATTGAAACAGAGCT
CTGGTAGCTATACAAGTTTTAGCAGAAAGTAGCAGAGATTGGTCTGATAAGCCGCCTGTTATCATGATGTGTATGGTCTC
AGTTGGTACTAGACCAATTACCTCTGGGAAATGTATTGGCCTGTTACAGTGAATTTGTCTAGTGTTAGATTCAGAATCCT
TCACTGCAACTGATTATATGAACATGGGATGACTGACATATACAATTTAAGTGGTCTAGGTAGAAATATGTGTGTTTTTC
ATTCACTTTATGTGCAAAGTAAATGTCTTCTTCACCATGCAACATGTATATTGTGTGTAGATGCTATGCTTCTGGTATTC
TACTATGCAAGTTTGATGGACTCTGGTTTGTGAATGTTAATCTTCAGTTTAAGAATCAACGGTTTTAATTGATGATTGTT
AGACTGTTGGATACAGTGTATTAAATAGGGCCATGCTATTAAGGTATATTTGACTAGTCTACAGGTTCTTTTAGTTGAGT
TCTCTAAAATTAAGGCGGCGACAATGAGTACAGTTTTCTGGAGCTTTACGTGTTTCATTATGTTCTATTTTGTTTATGAT
ACTTGCCGATAAAAATATGATTCTGTAGTGATGCATATTTAACGAAAATCATGTATAGTTACAATAATGAAAAATGCACT
GGTTCTTGTATGAAATCGATACTACAGACTGAACAAAATAAGGATAATTTGTGAGTTGCCACTTTCCTGGTCTAGTAAAT
GTATA---------------------------------------------------------------------------
--------------------TTATACTTGGCATGTGCATCTACATCCCAGGAGATTGATTTGGATGTCAACATTTGATTA
GTTCTCTGTGTAAAAATCTATGGTTTATAGAATAGTTACGGGAATTCATGTTCATGTTTTATCTCTGCTTACATTAGTGT
AGTGATGATGATCATGGGA---------------------TCATGATTGATATATTCTTATCTTGCCACTTCTTTATCGT
GGCACTTTTTTTTATCTTCTGTTTGGGCACAAGACATAGTTGTTGACCAATTTGCTGAAGCATTTCTTTTTACTAACCAA
TATTAATTGGGTGTCACATCAAATTGTCGTTATGCCTTTGGTGACTATTTTCTTATCATTCTCATATTGTTTTCTTGGTG
AATTAACAATTACTGATATTGTAG-AAGGAGCTTGTTGGTGTTTCTGTTTCTGTTTGGTATGTGTTTATGCGCATGTGAG
GGCAGTGGACATTTT-TCCTTCTGATAATATCCTT------TAATAATAATACACACCTCCCCTTAATGAGAAGATGTGC
AAAACTTTCCATGACTA-AAAAAATAGCCGTTTTGCATCTGTATAGTTTTGACCTA-TTAAATATTGAACCTACCATTTG
TTATGAGTACCATGAGTATAATGCTGTTCTTATCCTGGCTGAGTCTGGTGAAGTACTAACAATGAGTTTGTTGGTCGGCC
TTCCAGATCTGGAGTGGAAGCTTATATATGTTGGATCAGCTGAAGATGAGAACTATGATCAGCAACTTGAGAGTGTGCTT
GTTGGCCCTGTGAATGTTGGGACATACCGTTTTGTTCTGGAGGTAAATAGGTTACTGATCTACGACTCTGTGATCTGCAT
CATGAACTCTGATATGAAAATGATGTTTCACAACTGCACAGAGTTCTGCCTGTTCATATTACAGTTGGGCAGCTGCTTTG
CTCCTACCTCAGATTAAAATTTGCAACACCAGACTGATATGTCTG--TTTTTGTTTTCAGGCCGACCCCCCTGATCCCTC
AAAGATCCGCGAGGAGGACATAATCGGTGTCACGGTGCTTTTGTTGACCTGTTCATACATGGGGCAGGAGTTCATCAGAG
TAGGCTACTACGTGAACAATGATTATGATGATGAGCAACTTAGGGAAGAACCCCCGGCGAAGCTGCTGATTGACCGGGTG
CAGAGAAATATTTTGACCGACAAGCCCCGGGTCACCAAGTTCCCCATCAATTTCCATCCTGAAACAAGCGGAGGACAGCA
GCAAGATCAACCACAATCAGCTGTACCTGAAAACCCTACAGGCGAAGGGAGCAAGGCCAGCACAGATCTTTGACCGGGTC
TGAAAACTTGGGAATGCCAAAATTTTGATCTGCATGCCTTCTAGGTGAGATTGCAATATCAGATGGCTTCCTGGGATGCT
GCTGCTACCTGAACCGTCTGTTCTGGTGCGCCACTAAACTAGACTATAACCAAAAACTCACATTGGTTAGCCATGTGCCT
GTAGTGGGT-----AGGCTCTGACACACTGCGTCCTTTTGCTAGTGATGAACTGTAAGCTGGATGTTCATCCAGTAGTGT
TCCTGTGCAACCGTGGTTGTCTTGTCTCTTGGATTATG-CTGCAATCGCAAGGGTTCGTTAGATGACTTTGGTTGCCCAT
AATCATGTTTTGGTCCACTCCTGTTAGCTATTTGTGGAAACCGGGCTGCCCCCTTCGCATTGATCACGGAAATTTTCAGT
TCATACAGACTGAGAGATAGGAAAAGGGGAAGGAAGGATAGCGAGTTCGAGTAATCCCGCTGGTAAAGGCTCGCCGTT--
-----AAGACGTCTACTATAGGGCAAAATGTCATTAGCACTA-----TGCTGGGTACAGAGAAAAGATGGTACTACATGA
AGTAAGGTGAAACAAAACATCCACTAGACATAG----------------------------------------GTTCCTG
TTAGCTAGAGCTAGAGCACCAAAGTACTAGAAATAAGTCCTGCTTTAAGTAGTCCAGCTCATCTCCACGTCCGCCCGTCA
CGCTCTATATTCTTGACTGTTTGCGCAAGCGATGGGGCTACTCCATCGAAGACGACCGCATTAGG---------------
------------ATGCTTCTATAGCTCCCATAAGGTTAGTGTAATGATCGCC----------------------------
---------------------------CTCAACTCCTTTTGCGGGCACCTAGTTGAGCTTCTCGTGGTACACCTCTCCAC
CAAAGTGTCGTCAAC----------------CGTTGGCATTAGGTCTGGCGTCCCCATAGAGCTCCATAGCGAGAACCAA
ATCGTCCCCGCAAAGACGCAA-G-------------
>chr3B_841
C-------------------------------------------------------------------------------
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----------------------CCACT----------------------CAACATCGACAGTCACCGCTCAACAAAAAAA
CA-TCGACAGCCAGCAAGGAAGTACCGAAAGTACCCTTCTCTCTCCTCTGGGCCCTGTTCT---CCCAAATCCAGCCAAA
AAACCCA-CCCCCCTCCTCTCGGTTCGGCGATCGGCGGCGGCGGCGGCGATGAGCGCGGTGAACTTAACGAACGTGGCGG
TGCTGAACAACCCTACCTCTTTCGTCAATCCCTTCCAGTTCGAGATCTCGTACGAGTGCCTCGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTCATGGTTGTTCTTCC
GATTCGATTGCTGGATATGCGAGGCTGCTGAAATAGGGGTTGGAGCCTGCGGTTATTGCGGCTTGTATTCTTGGGTTTTA
GAGTAGTGGTGGAGCAGTTACTGTACTCGATTGGATTGAATA---TGCTCGGAATTGTGGATGGCTGTGATAGATTTACC
CTAGTTTGTGATTATTCCATTTTGACGAGTGAAGGGAATTATTAGATCATTTCCTTCTGCTTTGACATTGAAACAGAGCT
CTGGTATCTATGCAAGTTTTAGCAGAAAGTAGCAGAGATTGGTCTGATAAGCCGCCTGTTATCATGATGTGTAGGGCCTC
AGCTGGTACTAGACCAATTACCTCTGGGAAATGTATCGGCCTCTTACAGTGAATTTGTCTAGTGTTAGATTCAGAATCCT
TCACTACAACTGATTATATGAACATGGGATGACTGACATA--CAATTTAAGTGGTCTCGGGAGAAATAAGTGTGTTTTTC
ATTCACTTTATGTGCAAAGTAAGTGTCTT---CACCATGCAACATGTATATTGTGTGTAGATGATATGCTGCTGGTATTC
TACTATGCAAGTGTGATGGACTCTGGTTTGTGAACGTTAATATTCAGTTTAAGAATCAACGATTTTAATTGATGATTGTT
AGGCTGTTGGATACAGTGAATTAAATAGGGCCATACTATTAAGATATATTTGACTAGTCTACAGGCTCTTTCAGTTGAGT
T-TCTAAAATTAAGGCGATGACGATGAGTACAGCTTTCTGGAGCTTTACGTGTTTCATCATGTTCTATTTTGTTTATGAT
ACTTGCCGATGAAAATATGATTCTATAGTGATGCATATTTAACGCAAATCATGTATAGTTACAATCATGAAAAATGCACA
GGTTCTTGTATGAAATCGATACTACAGACTTTACAAAATAAGGATAATTTGTGAGTTGCCACTTTCCTGGTCTAGCAAAT
GTATACTCCCTCCGTCCCAAATTAAGTGACTCAACTTTGTACTAACTTTAGTACAAAGTTAGTACAAAGTTGAGTCACTT
ATTTTGGGACGGAGGGAGTATTATACTTGGCATGTGCATCTACATCCGAGGAGATTGATTTGGATGTCAACATCTGATTA
GTTCCCTGTGTAAAACTCTATGGTTTATAGAATAGTTACGGGAATTCATGTTCATGTTTCAACTCTGCTTACATTAGTGT
AGTGATGATGATCATGGGAAGACAACTCTTGATAATAGGATCATGATTGATATATTCTTACCTTGCCACTTCTTTATCGT
GGCAC-TTTTTTTATCTTCTGTTTGGGCACAAGACATAGTTGTGGACCAATTTGCTGAAGCATTTCTTTTTACTAACCAA
TATTAATTGGGTGTCACATCAAATTGTCATTATGCCTTTGGTGACCATTTTCTTATCATTCTCACATTATTTTCTTGGTG
AATTAGCAATTACATCTATTGTAG-AAGGAGCTTGTTGGTGTTTCTGTTTCTTTTTGGTATGTGTTTATGCGCATGTGAG
GGCAGTGGACATTTTGTCCTTCTGATAATCTCCTT------TAAC------ACACACCTCCCCTTAATGAGAAGATGTGC
AAAACTTTCCATGACTCTAAAAAAGAGTCGTTTTGCATATGTATAGTTTTGACCTACTTAAATATTGAGCCTACCATTTG
TTATGAGTACCATGAGTACAATGATGTTCTTTTCCTGGCTGAGTCTGGTGAAGTACTAACAATGAGTTTTTTGGTCGGCC
TTCCAGATCTGGAGTGGAAGCTTATATATGTTGGATCAGCTGAAGATGAGAACTATGATCAGCAACTTGAGAGTGTGCTT
GTTGGCCCTGTGAATGTTGGGACATACCGTTTTGTTCTGGAGGTAAATAGGTTACTGATCTACGACTCTGTAATCTGCAT
CATGAACTCTGATATGAAAATGATGTTTCACAACTGCGCAGAGATCCGCCTGTTCATATTACAGTTGGGCAGCTGCTTTC
CTCCTACCTCAGATTAAAATTTGCAACACCAGACTGATATGTCTG--TTTTTGTTTTCAGGCCGACCCCCCTGATCCCTC
AAAGATCCGTGAGGAGGACATAATCGGTGTTACGGTGCTTTTGTTGACCTGTTCATACATGGGGCAGGAATTCATCAGAG
TAGGCTACTACGTGAACAATGATTACGACGATGAGCAACTTAGGGAAGAACCCCCAGCGAAGCTGCTGATTGACCGGGTG
CAGAGAAATATTTTGACCGACAAGCCCCGAGTCACCAAGTTCCCCATCAATTTCCATCCTGAAACCAGCGGAGGACAGCA
GCAAGATCAGCCACAATCAGCTGTACCTGAAAACCATACAAGCGAAGGGAGCAAGGCCAACGCAGATCTTTGACCGGGTC
TGGAAACTTGGGAATGCCAAAATTTTGGTCTGCATGCCTTCTAGGTGAGATTGCAATATCAGATGGCTTCCTGGGGTGCT
GCTGCTACCTGAACCGTCTGTTCTGGTGCGCCACTAAACTAGACTATAACCAAAAACTCACATTGGTTAGCCATGTGCCT
GTAGTGGGT-----AGGTTCTGACACACTGCGTCCTTTTGCTAGTGATGAACTGTAAGCTGGATGTTCATCCAGTGA---
TCCGGTGCAACCGTGGTTGTCTTGTCTCTTGGATTATGTCTGCAATCGCAAGGGTTCGTTAGATGACTTCGGTTGCACAT
AATTATGTTTTGGTCCACTCCTGTTAGCTATTTGTCGAAACCGGGCTGCCCCCTTTCCATTGATCACGT-----------
----------------ATAGGAAAAGGGGAAGGAAGGGCAGCGAGTTCGAGTGATCCCGCTGGTAAGGGCTCACTGTT--
-----GAGACGCCTGCTGTAGTGCAAAATGTCATTAGCATTA-----TGCTGGGTACAGAGAAAAGATGG---TACATGA
AGTAAGGTGAAACAAAACATGCACTAGACATAGGTTCCTGTTTTTTTTGTTTTTTTTTTGAAAATATACATAGGTTCCTG
TTAGCTATAGCTAGAGCACCAAAGTACTAGAAATAAGTTCTGCTTTAAGTAGTCCAGCTGATCTCCACGTCCGCCCATCA
CGCTCTATATTCTTGATTGTTTGCGCAAGCGAGGGGGCTACTTCATCGAAGACGAGCGCATTACG---------------
------------ATGCTTCTATAGCTCCCATAAGGTTAGTGTAATGATCGCC----------------------------
---------------------------CTCAACTCCTTTTGCGGGCACCTAGTTGAGCTTCCCGTGGCACACCACTCCAC
CAAAGTGTCGTCAACCGTTGGAAAAAAAAAACGTTGGCATTAGGTCTGGCGTCCCCATGGAGCTCCATAGCCAGAACCAA
ATCGTCCTCACAAAGACGCAAAGCAAGTAGAATGT-
>chr1B_2839
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-------------------------------------------ACCATTTTCTTATCATTCTCACATTATTTTCTTGGTG
AATTAGCAATTACTGCTATTGTAGAAAGGAGCTTGTTGGTGTTTCTGTTTCTTTTTGGTATGTGTTTATGAGCATGTGAG
GGCAGTGGACATTTTGTCCTTCTGATAATCTCCTTTAATAATAAC------ACACACCTCCTCTTAATGAGAAGATGTGC
AAAACTTTCCATGACTCTTAAAAAGAGCCGTTTTGCATATGTATAGTTTTGACCTACTTAAATATTGAGCCTACCATTTT
TTATGAGTACCATGAGTATAATGTTGTTCTTTTCCTAGCTGAGTCCGGTGAAGTACTAACAATGAGTTTTTTGGTCGGCC
TTCCAGATCTGGAGTGGAAGCTTATATATGTTGGATCAGCTGAAGATGAGAACTATTATCAGCAATTTGAGAGTGTGCTT
GTTGGCCCTGTGAATGTTGGGACATACCATTTTGTTCTGGAGGTAAATAGGTTACTGATCTATGACTTTGTGATCTGCAT
CATGAACTCTGTTATGAAAATGATGTTTCACAACTGCGCAGAGATCCGCCTGTTCATATTACAGTTGGGCAGCTGCTTTG
CTCCTACCTCAGA-------------------------------------------------------------------
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>chr2B_2839
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-------------------------------------------ACCATTTTCTTATCATTCTCACATTATTTTCTTGGTG
AATTAGCAATTACTGCTATTGTAGAAAGGAGCTTGTTGGTGTTTCTGTTTCTTTTTGGTATGTGTTTATGCGCATGTGAG
GGCAGTGGACATTTTGTCCTTCTGATAATCTCCTTTAATAATATC------ACACACCTCCTCTTAATGAGAAGATGTGC
AAAACTTTCCATGACTCTTAAAAAGAGCCGTTTTGCATATGTATAGTTTTGATCTACTTAAATATTGAGCCTACCATTTT
TTATGAGTACCATGAGTATAATGATGTTCTTTTCCTACCTGAGTCCGGTGAAGTACTAACAATGAGTTTTTTGGTCAGCC
TTCCAGATCTAGAGTGGAAGCTTATATATGTTGGATCAGCTGAAGATGAGAACTATTATCAGCAACTTGAGAGTGTGCTT
GTTGGCCCTATGAATGTTGGGACATACCGTTTTGTTCTGGAGGTAAATAGGTTACTGATCTACGACTTTGTGATCTACAT
CATGAACTATGTTATGAAAATGATGTTTCACAACTGCGCAGAGATCCGCCTGTTCATATTACAGTTGGGCAGCTGCTTTG
CTCCTACCTTAGA-------------------------------------------------------------------
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>chr6B_2839
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-------------------------------------------ACCATTTTCTTATCATCCTCACATTATTTTCTTGGCG
AATTAGCAATAACTGCTATTGTAGAAAGGAGCTTGTTGGTGTTTCTGTTTCTTTTTGGTATGTGTTTATCCGCATGTGAG
GGCAGTGGACATGTTGTCCTTCTGATAATCTCCTTTAATAATAAC------ACACACCTCCTCTTAATGAGAAGATGTGC
AAAACTTTCCATGACTCTTAAAAAGAGCCGTTTTGCATATGTATAGTTTTGACCTACTTAAAAATTGAGCCTATCATTTT
TTATGAGTACCATGAGTATAATGTTGTTCTTTTCCTAGCTGAGTCCGGTGAAGTACTAACAATGAGTTTTTTGGTTGGCC
TTCCAGATCTGGAGTGGAAGCTTATATATGTTGGATCAGCTGAAGATGAGAACTATTATCAGCAACTTGAGAGTGTGCTT
GTTGGCCCTGTGAATGTTGGGACATGCTGTTTTGTTCTGGAGGTAAATAGGTTACTGATCAACGACTTTGTGATCTGCAT
CATGAACTCTGTTATTAAAATGATGTTTCACAACTGCGCAGAGATCCGCCTGTTCATATTACAGTTGGGCAGCTGCTTTG
CTCCGACCTCAGA-------------------------------------------------------------------
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>SNPs
------------------------------------------S-------------------S---S--S----------
-----------------------S--S-----------S-----------------------------------------
S-S----S-S--------------S-------------------SS------S-----------S---------------
------S----SSSS--SS--SSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS--------------S------------S----------S-----------------SS--------S--S-----
-----------------S---SS--------------SSS-------------S--------------------------
S--------------------------S-----------S-------S----S---------------------------
---------------SSSSS---SSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------
------------------------------------------------------S-------------------------
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-------------S--------------S---------------------------------------------------
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--------------------------------------------------------------------------S--S--
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---------------------S----------------------------------------------------------
----S---------------------------------------------------------------------------
-------------------------------------------------------------------S------------
---SS--------------------------------S--------------S---------------------------
-------------------S----------------------------S-------------------------------
------------------------------S-------------------------------------S-----------
---S-------S------------------------------------------------------S-------S-----
-------------------S---------------------------------------S------S-------------
------------------------S-------------------------------------------------------
-S-------------------S----------------------------------------------------------
-------------S-------------S----------------------------------------------------
----------------S---------------------------------------------------------------
S-------------------------------------------------------------------------------
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--------------------------------------------------------S-----------------------
-----------------------------------------------------------------------S--------
-----------------------------------------------------------------S----------S---
----------------------------------------------------------------------------S---
------S--------------------S------S---S------------------------S----------------
--------------------------------------------------SS-----------------S----------
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----------------------------S----------------------S----------------------------
-----------------------S---------------------SS---------------------------------
---------------------------S-----S----------------------------------------------
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-----------------------------------S-----------------------S--------------------
------------------------------------S--------------------------------------S----
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------------------------------------------------S-------------------------------
--S------SSSSS------------------------------------------------------------------
--------------------------------------------S----------------------------S------
--------------------------------------------------------------S----------S------
--S-------S-------------------------------------------------------------------SS
SSSSS-------------S-----------------S----SSSSSS-----S--------------------SSS----
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-----------------------------------S---------------------------------S----------
-----------------------------------------------S-------S---------SSSSSSSSSSSSSSS
SSSSSSSSSSSS---------------------------S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------------
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--------S---------------------S----S
>forward_826
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------ACTTCCCCCTGTCTCGCTTA------------------------------------------------------
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>reverse_1958
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-------------------------------------GTTGGTCTGATAAGCTGCCTG----------------------
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>forward_1069
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---------ACCCCACCTCTTTCGTCAAC---------------------------------------------------
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>reverse_3184
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---------------------------------------------------------------ATTTATGCGCATGTGAG
GGC-----------------------------------------------------------------------------
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>forward_2235
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-------------------------------------------------------TGTAGATGCTACGCTGCTGC-----
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>reverse_4254
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-------------AAGGTTCTGACACACTGCGT-----------------------------------------------
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------------------------------------
