>input_sequence_27468
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--------------------------------------------------------------CGTCAGCCTGCTGTCTCG
TCCC-TTGATCTCATCCCCTCCC---------CTGTCCGCCGCAGCGTCATCTCTCCCACCCTCCCCTCCGTTCTCCACC
CGCCGTGCCGTCGCCGTTCTCCT-CCCCGTACCTCCCGTGCGCCACCGCCCCATCCCTCCCGTGCGCCACCGCCCCATCC
CTCCTGAATCCAGACTAGGCCCGACTGAACTCACGTGCGAACGAGCCGGACGTCTCCTGCTCCGCCTACGCGCGGGATGG
CCAACCCGATGTACGGCTCCGGGCCGCTTCGATCCAGGTACGCCCCGTCCGATCCCCGATATCATTTGGCCCAATTCGCA
CCCTCTGCTGTTCGAATCGATCTATTTCTCCCGCGAAATTAGTTCAGAGCCCTTGACGAATTTGGGGGCTCCTTCGGGGA
TCGCAGGAACGCGCCGAGCTCGGACGAGATCCAGCTGCGGATCGACCCGGTGCATGGCGATCTTGACGAGGAGATCGATG
GGCTGCACTCGAGGGTTCGCATGTTGAAAGGCGTAAGACTTCCATCTCCTTGTCTCCTTTGTTCTAAAGCTGGTTCATGA
TTTCTGTTAGGTATGCTCAGTTGAGGTCTTACTAATTGCCGCAATTTTGACGTTAGAAACTTATGTTGTGTGTGCGGTTA
AGCATGCGCTGCAGATG----------TTTTATGTGACGTTCCAAGACATACTTCGTTCTCAATTTA----TTTTTTTAC
CGTAATTCCATCCATGATTTAATTTTTGGTGGCTGTGCGGCCTGTAAGAGTTCGTTTAAGATGATTTTATT-GTCTTTAA
ACCAAGATGAACTCGGAGTAGATGTAAATTAGATTAGAACCATCTCAGGTTAATACGGGAGATTGATTGTATGAGTCGAC
GCCACATGTAAGTAGTTTATTTACTTAGTGAGGAATTGGTACCAAATTTTGTTTA--TATCAGTCTCACGGCAAGAAATT
CCATAGTTGGTCTGATGTTAATGGATTTGGGTTGTATGGAAATGCAATGTATAACCTCGTTTAATTAAGTTCATACCCAC
TTTAAGTCTCTTGCTCAGTCATCATGGGCCCAGTACATCTTAAGGGCATCTCCAATGGGAGACGCTAAGAGGGGGCGCTA
GGAAATACTTCCTGGCCAATCGACGGTTCGCTCGTCAATTCCTGGCGTCGGGCGCCGCGTAGACGCCAAACGATGCTTCG
AGGGCTTACCTTTTTCTTTCACGGACGATAGTGCTGGGCCTTGTATTAGATCCGAATTTAGCGCCTCTTGTTAGTGCCTA
CCATTGGAAGAGTGAGCGCTTAGATTTTCTGTTTTTTATTTTTCCTCCCTAAGCGTCTATATAAGCGCTTAGCATTGTAC
ATGCTCTAGACACCGCCTTCATACACGTCATACCTTTCTTTGCGGCATTCCATCTGTCTTATTATGGGTGTGTTTGGTTG
ATG--------CCCGCACTAGCCTTACCAAATGTTGTCTTGCCAATTTTTTTGGCCAAGGAATTCCTCACCCTCATTTGG
CCAACTATTTGGCAAAAATCTGTGAGATGAAGGGGTGCACCCATTGGCAACCAAAGTTTAATAGGTAGCCAATTTTT-GG
CAGGGCTAGTGTTGGCAGCAAACCAAACAGACCCATATCTACTTCTTTGTTTCTCATCGTCACCTCCCTAGTCCATTATT
ATTGTTTATGGTTA-ACTTCTTGTGTGATGCTCATTGATCCATACCTTCTCTGATATACTGCCACG--------------
--TGTTAACCTTCGCATGGAATTAACTCCATTGGTTTTCTGATTTTAGGCCTATAAACAGTCTTATGAGTTGGTGTGAAT
TTGTTGATGGCTGGTTGACATCATTACTGCTACTTTTGTTCCCGTAAAATTAATCTTGCAAGCATTGAGATGATATTACG
TCTAGGTTTTTAATTTATACAATTTCAACTTTTAACAAGCAATGAATTTAGTACTTTGATGATAGAGAACTGCCATGTTC
TGATCAATTATTTGTTCTACTTAAGCTGTTGATGCTGGTCTTTTCTTCACATTTCAGAAACTTATTTGTTGTTTGACGTG
GTCGCTTTTCCAGGTCGCCCAAGAGATAAACTCCGAGGCCAAGTTCCAGAATGATTTCCTCAACCAACTGGTATTGTTGC
TGTTCTATCATGATTCTTTTGTGGAATCCTTGGTTATTTATGTT--TTTTCCTGAATGTTTATAACATGTTTATTGTTTT
CCATGTGCACTTGTGCTTTCCTACCATTTATATACCATTTTTAGATGTACATCTATGTCTGCT---------------GA
GTCAATTACTGTGTATATATGACCAAGAAGATCCATTTTATCTACACTACTAA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TAAATATATGTGT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCTGTGCACTGATTTTTTGTTACCCTCTGTTTATGAACAGCAACTGACCCTTAC
GAAAGCTCAGGCTGGAGTGAAGAATAACATGCGAAGGATGAACAAAAGCATCATCCAGCAGGGCTCCAATCATATTGTCC
ATGTTGTCCTATTTGCTCTGTTATGCTTCTTTGTTGTGTATCTTTTGTCAAAGTTCTCTAGAAGATAGCTCTTCTGTTGT
TAGGTGAAGCCAAATCGAAACAACTGAAATGTACCATGTGTTGTATTTAGTCTGAAAAAA---GTGTCGCGAGTA--ACG
AAATCGAATGGAAAATGGGACTGGACTGTTTACATGGTATATTTGACTTGAGAACAAGTTGTGTATCCAGCTTCCTGTCA
TGAAA--GAGACCATTTCACAACTTCTGGGCTTGTAAGATA---------------------------------------
--------------------------------------------------------------------------------
---------------TATTTCATGCATGAACTAGAGTATTTTTGGCTTGATGAACTTCTGCGAATCACCACGGCATCCGG
TATCATAATTTG--------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr2D_1_TraesCS2D01G200400
TAAGAATCCACATGCAAGTCCTTCAAAAAACCTGTGTAGTCTTCGCTCTGCACCCACGGGTGCAGCTTGAGCAAAGCTCA
TTTTCCCAATAGGCCACCACCTCACCGGAGCAACCTTGTTGCAACCCAGTAGCTTGTAGATGCAGCAGTCAGGAAGTCAT
CGATGTAAACCAGAAGATGCCGACAAATGCGAAGT-GGAATATCGTCATCCCAGA--------CACCAAGAAGGGGCATA
AGATAATCCTTACTTTGACCAGAACAAGGAGAGGAAGACAAATCTCATAAGTTCCCCGACAGAGTCGTATCTGTCTGAGC
TTCATCGAACGGAGATAAGATTGGAGAACAAAAAGCACATTATAACGCTATCATTCTGCATGACACC-------AACACT
ACTATCTTCTGACTCGTCCACATCATGCCAAGAATGGACATCAACATAGTGAAAAATCGAGGAACGATTATTTCAATCAA
CGTCGTTGCCCCATCTTCACTGACGATGAAAAACTCGTAGACCCTTTGGCGTT-GAACATATCTCATTAAATCCAACTTT
CGATAGGACATGATGTTTTCATTGGCGGCGAGGCGTGCGTCCACTTGTCATTAGACTAGCCACAGTGGGAGTAACTTCGG
TGGTAACATCGAGTCCAACTCAGCAATTTTGCTTATGTGGCAATGAGTTAATGAGGAGAGATGTAGTACTAGTAACTTAG
CTAGTTACTGTAACATCACATGTCCCAATGCAATATGAGTCTATAACGTAATAAATGAAGCTTTGCATGTTACCATACTT
ATGTTACTACCCACTATTGAGATTGTAACATAGAGTAGTAACACGCGTTTTTCTTCTACGGAAGATGAAAGGAAAACGGA
GGAAAGTTGTGGC-TAAACCATGGA----ATAGCACTACCCCTCATTGGACGCTCCAGATGTCCCCAGCAGCGGATCAAG
CGGCTGAAACAATCGCGATGAGGTGTCGCGGAAGAAAACTGGTTAACCTCGTTTTCCAACCCCGTCAGCCTGCTGTCTCG
TCCC-TTGATCTCATCCCCTCCC---------CTGTCCGCCGCAGCGTCATCTCTCCCACCCTCCCCTCCGTTCTCCACC
CGCCGTGCCGTCGCCGTTCTCCT-CCCCGTACCTCCCGTGCGCCACCGCCCCATCCCTCCCGTGCGCCACCGCCCCATCC
CTCCTGAATCCAGACTAGGCCCGACTGAACTCACGTGCGAACGAGCCGGACGTCTCCTGCTCCGCCTACGCGCGGGATGG
CCAACCCGATGTACGGCTCCGGGCCGCTTCGATCCAGGTACGCCCCGTCCGATCCCCGATATCATTTGGCCCAATTCGCA
CCCTCTGCTGTTCGAATCGATCTATTTCTCCCGCGAAATTAGTTCAGAGCCCTTGACGAATTTGGGGGCTCCTTCGGGGA
TCGCAGGAACGCGCCGAGCTCGGACGAGATCCAGCTGCGGATCGACCCGGTGCATGGCGATCTTGACGAGGAGATCGATG
GGCTGCACTCGAGGGTTCGCATGTTGAAAGGCGTAAGACTTCCATCTCCTTGTCTCCTTTGTTCTAAAGCTGGTTCATGA
TTTCTGTTAGGTATGCTCAGTTGAGGTCTTACTAATTGCCGCAATTTTGACGTTAGAAACTTATGTTGTGTGTGCGGTTA
AGCATGCGCTGCAGATG----------TTTTATGTGACGTTCCAAGACATACTTCGTTCTCAATTTA----TTTTTTTAC
CGTAATTCCATCCATGATTTAATTTTTGGTGGCTGTGCGGCCTGTAAGAGTTCGTTTAAGATGATTTTATT-GTCTTTAA
ACCAAGATGAACTCGGAGTAGATGTAAATTAGATTAGAACCATCTCAGGTTAATACGGGAGATTGATTGTATGAGTCGAC
GCCACATGTAAGTAGTTTATTTACTTAGTGAGGAATTGGTACCAAATTTTGTTTA--TATCAGTCTCACGGCAAGAAATT
CCATAGTTGGTCTGATGTTAATGGATTTGGGTTGTATGGAAATGCAATGTATAACCTCGTTTAATTAAGTTCATACCCAC
TTTAAGTCTCTTGCTCAGTCATCATGGGCCCAGTACATCTTAAGGGCATCTCCAATGGGAGACGCTAAGAGGGGGCGCTA
GGAAATACTTCCTGGCCAATCGACGGTTCGCTCGTCAATTCCTGGCGTCGGGCGCCGCGTAGACGCCAAACGATGCTTCG
AGGGCTTACCTTTTTCTTTCACGGACGATAGTGCTGGGCCTTGTATTAGATCCGAATTTAGCGCCTCTTGTTAGTGCCTA
CCATTGGAAGAGTGAGCGCTTAGATTTTCTGTTTTTTATTTTTCCTCCCTAAGCGTCTATATAAGCGCTTAGCATTGTAC
ATGCTCTAGACACCGCCTTCATACACGTCATACCTTTCTTTGCGGCATTCCATCTGTCTTATTATGGGTGTGTTTGGTTG
ATG--------CCCGCACTAGCCTTACCAAATGTTGTCTTGCCAATTTTTTTGGCCAAGGAATTCCTCACCCTCATTTGG
CCAACTATTTGGCAAAAATCTGTGAGATGAAGGGGTGCACCCATTGGCAACCAAAGTTTAATAGGTAGCCAATTTTT-GG
CAGGGCTAGTGTTGGCAGCAAACCAAACAGACCCATATCTACTTCTTTGTTTCTCATCGTCACCTCCCTAGTCCATTATT
ATTGTTTATGGTTA-ACTTCTTGTGTGATGCTCATTGATCCATACCTTCTCTGATATACTGCCACG--------------
--TGTTAACCTTCGCATGGAATTAACTCCATTGGTTTTCTGATTTTAGGCCTATAAACAGTCTTATGAGTTGGTGTGAAT
TTGTTGATGGCTGGTTGACATCATTACTGCTACTTTTGTTCCCGTAAAATTAATCTTGCAAGCATTGAGATGATATTACG
TCTAGGTTTTTAATTTATACAATTTCAACTTTTAACAAGCAATGAATTTAGTACTTTGATGATAGAGAACTGCCATGTTC
TGATCAATTATTTGTTCTACTTAAGCTGTTGATGCTGGTCTTTTCTTCACATTTCAGAAACTTATTTGTTGTTTGACGTG
GTCGCTTTTCCAGGTCGCCCAAGAGATAAACTCCGAGGCCAAGTTCCAGAATGATTTCCTCAACCAACTGGTATTGTTGC
TGTTCTATCATGATTCTTTTGTGGAATCCTTGGTTATTTATGTT--TTTTCCTGAATGTTTATAACATGTTTATTGTTTT
CCATGTGCACTTGTGCTTTCCTACCATTTATATACCATTTTTAGATGTACATCTATGTCTGCT---------------GA
GTCAATTACTGTGTATATATGACCAAGAAGATCCATTTTATCTACACTACTAA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TAAATATATGTGT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCTGTGCACTGATTTTTTGTTACCCTCTGTTTATGAACAGCAACTGACCCTTAC
GAAAGCTCAGGCTGGAGTGAAGAATAACATGCGAAGGATGAACAAAAGCATCATCCAGCAGGGCTCCAATCATATTGTCC
ATGTTGTCCTATTTGCTCTGTTATGCTTCTTTGTTGTGTATCTTTTGTCAAAGTTCTCTAGAAGATAGCTCTTCTGTTGT
TAGGTGAAGCCAAATCGAAACAACTGAAATGTACCATGTGTTGTATTTAGTCTGAAAAAA---GTGTCGCGAGTA--ACG
AAATCGAATGGAAAATGGGACTGGACTGTTTACATGGTATATTTGACTTGAGAACAAGTTGTGTATCCAGCTTCCTGTCA
TGAAA--GAGACCATTTCACAACTTCTGGGCTTGTAAGATA---------------------------------------
--------------------------------------------------------------------------------
---------------TATTTCATGCATGAACTAGAGTATTTTTGGCTTGATGAACTTCTGCGAATCACCACGGCATCCGG
TATCATAATTTGATCTTT------AAA---AAGGAGATTGACTAATGACGTCACAGCTCAGAGTAAGACGCT-GGGCAGT
CGAGAACAGCAGGTCGGGAGATGAGAACACGGGCACCGATTGACATACGTGTGCCGCCACGCC------CACCCGCACCG
CCGTTTGGACTTTGGAGGAGGGACATGCGTCCTCCCCTTCCTCCTGCATGGCTGCCACCTCGCAGTGCTCCTCGTCGCCT
ATATTT-GACGACGCCTCCGGTGCAGGACTGACTACCGAGCAAGGTTTCCATACGTACCATGGCTGCCCAGCTCCTCCTC
CTCCTCCTTCTAGCGCTCGTCAACGTGGCGCCACCACGGCGCCACGCCGGCGTGTCCGCTGAAGACGTCATCCAGCAGGT
GACGGACGGCGGCCACGGCGCTGGACGTCCCGGTCTGCTCCCGGAGGCGCAGTTCGCGGCGTTCGTGCGGCGGCACGGCA
AGGAGTACTCGGGCCCCGAAGAGTACGCGTGCCGGCTGCGCGTGTTCGCGGCCAACGTGGCCCGCGCAGCCGCCCACAAG
GCGCTCGACCCGGGCGCGCGCCACGGCGTCACGCCCTTCTCCGACCTCACCCAGGAGGAGTTCGAGGCGCGCCTCACCGG
CCTCGCCGGCGCCGGCGACGTCCTGCGCAGCGTGCGGGCGATGCCGGCTGCGGCGCCGGCCACGGAGAAGGAGGTCGCCG
CGCTGCCCGCCAGCTTCGACTGGCGCGACAAGGGCGCCGTCACCGATGTCAAGATGCAGGTACGCGCGCGATGCAGTTCA
CTCCGCTAGGAAGCTTGTGATGTCTTTACATGGAGAGCTTGCATGCATGTGTTTTTTGGTTTTAGGGCGTGTGCGGCTCG
TGCTGGGCGTTCAGCACGACCGGCGCCGTGGAGGGCGCCAACTTCGTCGCCACGGGGAAGCTCCTCAACCTCAGCGAGCA
GCAGCTGGTCGACTGCGACCACACGGTGCGACATCATCAGCTCAATTCAATC-----GCCCTCCCAATTCATAT
>chr2B_1
TAAGAATCCACATGCAAGTCCTTTAAAAAACCAGTGTAGTCTTTGTTCTGCATCCAATGATGCGTCTTGAGCAAAGCTTA
TTTTTCCTCTAGGTCACCGCCTCACCAGAGCAATC---------------------------CAGTAGTCAGGAAGTTAT
CGATGTAAACCAGAAGATGCCGATAAACGCGAACTGGGTATATCGTCATCCCGGAGAAGCCGGCACCAAGAAGGGGCAGA
AGATAATCCTTACTCTGACCAGAACAAGAAGAGGAAGACAAATCTCATAAGTTCCTCGACGGAGTCGTATCTGGCTGAGC
TTCATCGACGGAGATGGG--------------------ATTATAACGCTATCGCTCTGCATGACACTGTGAGCAAACACT
ACTATCTTTTGACTCACCCATATCACGCCAAGAATGTACATCAACACAGTGAAAAAACGAGGAACGATTATTTCAATCAA
CGTCGTTGCCCCAACTTCACTGACGATGAAAAACTCGTAGACCCTTTGACGTTAGAACATATCTCATTAAAACCAACTTT
CGACAGGATATGATGTTTTCATTGGCCGCGAGGCGTGCGTCTACTTGTCATTAG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GCGTTTTCCTTCTACGAAAGATGAAAGGAAAACGGA
GGAAAGTTGTGGC-TAAACCATGGA----ATAGCACCACCCCTCATTGGACGCTCCAGATCTCCCCAGCGGCGGATCAAG
CGGCTGAAACAATCGCGATGAGGTGTCGCGGAAGAAAACTGATTAACCTCCTTGTCCAACCCCGTCAGCCTGCTGTCTCG
TCCCATTGATCTCATCCCCTCCC---------CTGTCCGCCGCAGCGTCATCTCTCCCACCCTCCCCTCCGCTCTCCACC
CGCCGTGCCGTCGCCGTTCTCCGCCCCCGTACCTCCCGTGCGCCACCA------------------------CCCCATCC
TTCCTGAACCCAGACTAGGCCCGCCTGAACTCGCGTGCGAACGAGCCGGGCGTCTCCTGCTCCATCCCCGCGCTCGATGG
CCAACCCGATGTACGGCTCCGGGCCGCTTCGATCCAGGTACGCCCCGTCCGATCCCCGATATCATCTGGCCCAATTCGCA
CCCTCTGCTGTTCGAATCGATCTATTTCCCCCGCGAATTTAGTTCAGAGCCCTTGACGAATTTCGGGG-----------A
TCGCAGGAACGCGCCGAGCTCGGACGAGATCCAGCTGCGGATCGACCCGGTGCATGGCGATCTTGACGAGGAGATCGATG
GGCTGCACTCGAGGGTTCGCATGTTGAAAGGCGTAAGACTTCCA--------TCTCCTTTGTTCTAAAGCTGGTTCATGG
TTTCTGTTAGGCATGCTCAGTTGAGGTCTTATTA----CCGCAATTTTGACGTTAGAAACTTATGTTGTGTGTGCGGTTA
AGCATGCGTTGCAGATG----------TTTTATTTAACGTTCCAAGTCATATTTCGTGCTTCTTAATTTATTTATTTTAC
CGTAATTCTATCCATGATTTAGTTCTTGGTGGCTGTGAGGCCTGTAGGAGTTCGTTTAAGATGATCTTATTCGTCTTTAA
ACCAAGATGAACTCGGAGTAGATGTCAATTAGATTAGAACCATCTCAGATTAGTACGGGAGATTGATTGTATGAGTCGAC
ACCATATGCAAGTAGTTTATTTATTTAGCGAGGAATTGGTACCAAATATTGTTTA--TATCAGTCTCACGGCAAGAAATT
TCATAGTTGGTCTGATGTTAATGGATTCAGGTTGTATGGAAATGCAATGTATAACCTGGTTTGATTAAGTTCATACCCAC
TTTAAGTCTCTTGCTCAATCATCATGGGCCCAGTACATCTTAAG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ACACTGCCTTCATACGCGTCATACCTTTCTTTGCGGCATTCCATCTGTCTTATTATGGGTGTGTTTGGTTA
ATG--------CCAACACTAGCCTTACCAAATGTTGGCTTGCCAATTTTTT-GGCCAAGGAATTCCTCACCCTCATTTGG
CCAACTATTTGGCAAAAATCTGTGAGATGAAGGGGTGCACCCATTGGCAACCAAAATTTAATAGGTAGCCAATTTTT-GG
CAGGGCTAGTGTTGGCAGCAAACCAAACAGACCCATATCTACTCCTTTGTTTCTCATCGTCACCTCCCTAGTCTATTATT
ATTGTTTATGGTTAAACTTCTTGTGGGATGCTCATTGATCCATACCTTCTCTGATATACTGCCACG--------------
--TGTTAACCTTCGCATGGAATTAACTCCATCGGTTTTCTGGTTTTAGGCCTATAAACAGTCTTATGAGTTGGTGTGAAT
TTGTCGATGGCTGGTTGACATCATTACTGCTACTTTTGTTCCCATAAAATTAATCTTGCAAGCATTGAGATGATATTACG
TCTAGGTTTTTAATTCATACAATTTCAACTTTGAACAAGCAATGGATTTAGTACTTTGATGATAGAGAACTGCCATGTTC
TGATCAATTTTTTGTTCTAGTTAATAAGCTGTTGAGCTGGGTTTTTTCACACTTCAGAAACTTATTTGTTGTTTGACGTG
GTCACTTTTCCAGGTCGCCCAAGAGATAAACTCCGAGGCCAAGTTCCAGAATGATTTCCTCAACCAACTGGTATTGTTGC
TGTTCTATCATGATTCTTTTGTGGAATCCTTGGTTATTTATGTTTTTTTTCCTGAATGGTTATAACATGTTTATCGTTTT
CCATGTGCACTTGTGCTTTCCTACCATTTATATACCATTTTTAGATGTACATCTATGTGTGCTAGAGAATATTCCGTTGA
ATCAATTACTGTGTATACATGACGTAGAAGATCCATTTGATCTACACTACTAA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TAAATACAGTTTATCTATTGATTT
TGTTGCTTTGAAATGAATTATTTACAAAAATAGTTTTTTTGTTTAAAATGTC--TAAGCCTGCAATTGAACATACCAAGC
AAAGTTCAAATTGGTGCATATATTGTTTGAATGGACTATCTATACTGTTTTAATGGTTAAATATTACCTTTTGCAAAAG-
-GGATACAATTACTTTATGGACTATCTGTATTGTTTTATTTGAGTAATATTACCTTCGAAATAAAAAGAACTTTTTCTCT
TTCTT---AACAATGGTTATT-CTTGGCTGTGCACTGATTTTTTGGTACCCTCTGTTTATGAACAGCAACTGACCCTTAC
GAAAGCTCAGGCTGGAGTGAAGAATAACATGCGAAGGATGAACAAAAGCATCATCCAGCAGGGCTCCAATCATATTGTCC
ATGTTGTCCTATTTGCTCTGTTGTGCTTCTTTGTTGTCTATCTTTTGTCAAAGTTCTCTAGAAGATAGCTCTTCTGTTGT
TAGGTGAAGCCAAATCGAATCAACTGAAATGTACCATGTGTTGTATTTAGTCTGGAAAAA---GTGTGTCGCGAGTGACG
AAATCGAATGGAAAATGGGACTGGCCTGTTTACATGG----TTTGACTTGAGAACAAGTTGTGTATCCAGCTTCCTGTCA
TGAAAGAAAGACCATTTCACAACTTCTGGGCTTGTAAGATACTTCCTCCGTTTCTAAATATAAGTCTTTTAAAGATTTCA
ATAAGAGACTACACACTATAAACTACGTCTATATACATTCGTATGTAGTCCATAGGGAAATCTCTAGAAAGACTTGTATT
TAGGAACAGGGAGTATATTTCATGCATGAACCAGAGTATTTTTGGCTTGATGAACTTCTGCGAATCACCACGGCATCCGG
TATCATAATTTGATCTTTAAATATAAAAAAAAGGAGATTGACTGATGACGTCACAACTCAGAGTAAGACGCT-GGGCAGT
CAAGAACAGCTGGTCGGGAGATGAGAACACGGGCACCGACTGACATACGTGTGCCGCCACGGCCACGCGCACCCGCACCG
CCGTTTGGAT-------GAGGGACATGCGTCCTCCCCTTCCTCCTGCATGGCTGCCACCTCGCAGTGCTCCTCATCGCCT
ATATTTTGACGGCGCCTCCGGTGCAGGACCCACTACCGAGCAAGGTTTCCATACGTACCATGGCTGCCCGGCTCGTCGTC
CTCCTCCTTCTAGCGCTCGTCAACGTGGCGCCGCCACGGCGCCACGCCGGCGTGTCCGCCGAAGACGTCATCCGGCAGGT
GACGGACGGCGGCCACGGCGCCGGACGTCCCGGTCTGCTCCCGGAGGCGCAGTTCGCGGCGTTCGTGCGGCGGCACGGCA
AGGAGTACTCGGGCCCCGAAGAGTACGCGCGCCGGCTGCGCGTGTTCGCGGCCAACGTGGCCCGCGCCGCCGCCCACCAG
GCGCTCGACCCGGGCGCGCGCCACGGCGTCACGCCCTTCTCCGACCTCACCCGGGAGGAGTTCGAGGCGCGCCTCACCGG
CCTCGTCGGCGCCGGCGACGTCCTGCGCAGCGTGCGGGGGATGCCAGCCGCGGCGCCGGCCACGGAGGAGGAGGTCGCCG
CGCTGCCCGCCAGCTTCGACTGGCGCGATAAGGGCGCCGTCACCGATGTCAAGATGCAGG--------------------
------------------------------------------------------------------GCGTGTGCGGCTCG
TGCTGGGCGTTCAGCACGACCGGCGCCGTGGAGGGCGCCAACTTCGTCGCCACGGGGAAGCTCCTCAACCTCAGCGAGCA
GCAGCTGGTCGACTGCGACCACACGGTGTGGCATCATCAACTCAATTCAATTCAATTGCCCTCCTAATTCATAT
>chr2A_856
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AAAAAGGG
GGAAAGTTGTGGCCTAAACCATGGATGGAATAGCACTACCTCTGATTGGACGCTCCAGATCTCCCCAGC-GCGGATCAAG
CGGCTGAAACAATCGCGATGAGGTGTCGCGGAAGAAAACTGATTAATCTCCTTTTCCAACCCCGTCAGCCA---GTCTCG
TCCA-TTGATCTCATCCCCTCCCTTCCCTGCCCTGCCCGCCGCAGCGTCATCTCTCC-------------GTTCTCCACT
CGCCGTGCCGTCGCCGGTCTTT-CCCCCGTACCTCCCGTGCGCCACCG------------------------CCCCATCC
CTCCTGAATCCAGACTAGGCCCGACTGAACTCGCGTGCGAACGAGCCGGACGTCTCTTGCTCCGCCTACGCGCGCGATGG
CCAACCCGATGTACGGCTCCGGGCCGCTTCGATCCAGGTACGCCCCGTCCGATCCCCGATATCATGTCGCCCAATTCGCG
CCCTCTGCTGTTCGAATCGATCTATTTGTCC------------TCGGAGCCCGTGACGAATTTGGGGT-TCCTTCGGAAA
TCGCAGGAACGCGTCGAGCTCGGACGAGATCCAGCTGCGGATCGACCCGGTGCATGGCGATCTTGACGAGGAGATCGACG
GGTTGCACTCGAGGGTTCGCATGTTGAAAGGCGTAAGACTTCCATCTCCTTGCCTCCTTTGTTCTAAGCC-GGTTCATGA
ATTCTGTTAGGTATGCTCAGTTTAGGTCTTAATT------GCAATTTTGACCTTCGAAACTTATGTTGTGTGCGCGGTTA
AGCATGAATGGCAAATGTTTTATGTGATTTTATGTGACGTTCTAAGACATACTTCGTGGTTCCCAATTTATTTATTTTAC
CGTAATTCCATCCATGATTTAGTTCTTGGTGGTTGTGCGGCCTGTACGAGTTCGTTTAAGATAGTTTTAT--GTCTTTAA
ACCAAGATGAACTCGGAGTATATGTCAATTAGATTAGAACCATCTCAGGTTAACACGGGAGATTGATTGTATGAGTCGAC
ACCATATGTAAGTAGTTTATTTATTTAGCGA-------GTACCAAATATTGTTTATATATCAGTCTCACAGCAAGAAATT
TCATAGTTGGTCTGATGTTAATGGATTTGGGTTGCATGGAAATGCAATGTATAACCTGGTTTAATTAAGTTCATACCCAC
TTTAAGTCTCTTGCCCAATCATCATGGGCCCAGTACATCTTAAG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ACACTGCCTTCATATGTGTCATACCTTTCTTTGCGGCATTCCATCTGTCTTATTATGGGTGTGTTTGGTTG
ATGGCTTGATGCCGACACTAGCCTTACCAAATGTTAGCTTGCCAATTTTT-TGGCCAGGGAATTCCTCACCCTCATTTGG
CCAACTATTTGCCCAAAATCTGTGAGATGAAGGGGTGCACCCATTGGCAACCAAAATTTAATAGGTAGCCAATTTTTTGG
CAGGGCTAGTGTGGGCAGCAAACTAAACAGACCCATATATACTCCTTTGTTTCTCATCGTAACTTCCCTAGTCCATTATT
AGTGTTTATGGTTA-ACTTCTTGTGGGATGCTCATTGACCCATACCTTCTCTGATATACTGCCACGTGCATGCAGTGTTT
CCTGTTAACCTTCGCATAGAATTAACTCCATTGGTTTTCTGGTTTTAGGCCTATAAACAGTCTTATGAGTTGGTGTGAAT
TTGCCGATGGCTGGTTGACATCATAACTGATACTTTTGTTCCTGTAAAATTAATCTTGCAACCATTGAGATGATATTATG
TCTAGGTTTTTAATTCATACAATTTCAACTTTTAACAAGCAATGGATTTAGTACTT---TGATAGAGAACTGCCATGTTC
TGATCAATTATTTGTTCTAGTTAAGCTGTTGATGCTGGCTTTTTCTTCACATTTCAAAAACTTATTTGTTGTTTGACGTG
GTCACTTTTCCAGGTCGCCCAAGAGATAAACTCCGAGGCCAAATTCCAGAATGATTTCCTCAACCAACTGGTATTGTTGC
TGTTCTATCATGATTCTTTTGTGGTATCCTTGGTTATTTATGT--TTTTTCCTGAATGGTTATAACATGTTTATTGTTTT
CCATGTGCACTTGTGCTTTCCTACCATTTATATACCATTTTTAGATGTACGTCTATGTGTGCTAGAGAATACTCCGTTGA
GTCAATTACCGTGTATATATGACCTAGAAGATCCATTTGATCTACACTACTACTCCCTCCGTTCCTAAATATAAGTCTTT
CTAGACATTTCAAATGGATTACAACATACGGATGAATGTAGACATATTTTAGAGTGTAGATTCACTCATTTTGCTCCGTA
TGTAGTCACTTGTTAGAATTTCTAGAAAGACTTATATTTAGGAACGGAGGGAGTACTAAATACAGTTTATATATTGATTT
TGTTGCTTTGAAATGAAGTATTTTTAAAAATAG-TTTTTTGTTTAAAATGTCTATAAGCCTGCAATTGAACATAC-----
AAAGTTCAAATTGGTGTATATATTGTTTGAATGGACTATCTATACTGTTTTAATGGTT-AATATTACCTTCTGCAAAAGC
TGGATACAATTACTTTATGGACTATTTGTATTGTTTTATGTGAGTAATATCACCTTTGCAAAAAAAAATCTTTTTCTTTT
CTTTCTTAAACAATGGTTATTTCTTGGTTGTGCACTGATTTTTTGGTACCCTCTGTTTATGAACAGCAACTGACCCTTAC
GAAAGCTCAGGCTGGAGTGAAGAATAACATGCGAAGGATGAACAAAAGCATCATCCAGCAGGGCTCCAATCATATTGTCC
ATGTTGTCCTATTTGCTCTGTTATGTTTCTTTGTTGTCTATCTTTTGTCAAAGTTCTCTAGAAGATAGTTATTC---TGT
TAGGTGAAGCCAAATCGAATCAACTGAAATGTACCATGTGTTGTATTTAGTCTGAAAAAAAGTGTGTCGCGAGTA--ACG
AAATGGAATGGAAAATGGGACTGGACTGTTTACATGGTATATTTGACTTGAGAACAAGTTGTGTATCCAGCTTCCTGTCA
TGAAAGAGAGACCATTTCACAACTTCTGGGCTTGTAAGATG---------------------------------------
--------------------------------------------------------------------------------
---------------TATTTCATGCATGAACTAGAGTGTTTTTGGCTTGATGAACTTCTGCGAATCACCACGGCATCCGG
TATCATAATTTGATCTTC------AAAAAAAAGGAGATTGACTAATGACGTCACAACTCAGAATAAGACGCTGGGGCGGT
CGAGAGGAGCAGGTTGGAAGATAAGAACACGGGCACCGACTGACGTACGTGTGCCGCCACG------------CGCACCG
CCGTTTGGACTTTG-AGGAGGGACATGCGTCCTCCCCTTCCTCCTGCATGGCTGCCACCTCGCAATGCTCCCCATCGCCT
ATATTT-GATGACGCCTCCGGTGCAGGACCGACTACCGCGCAAGGTTTCCATACGTACCATGGCTGCCCGGCTCGTCGT-
--CCTCCTTCTAGCGCTCGTC---------------------CACGCCGGCGTGTCCGCCGAAGACGTCATCCGGCAGGT
GACGGACGGCGGCCACGGCGCTGGACGCCCCGGTCTGCTCCCGGAGGCGCAGTTCGCGGCGTTCGTGCGGCGACACGGCA
AGCAGTACTCGGGCCCCGAGGAGTACGCGCGCCGGCTGCGCGTGTTCGCGGCCAACGTGGCCCGCGCAGCCGCCCACCAG
GCGCTCGACCCGGGCGCGCGCCACGGCGTCACGCCCTTCTCCGACCTCACCCGGGAGGAGTTCGAGGCGCGCCTCACCGG
CCTCGCCGGCGCCGGCGACGTCCTGCGCAGCGTGCGGGGGATGCCCGCCGCGGCGCCGGCCACGGAGGAGGAGGTCGCCG
CGCTGCCCGCCAGCTTCGACTGGCGCGACAAGGGCGCCGTCACCGATGTGAAGATGCAGG--------------------
------------------------------------------------------------------GCGTGTGCGGCTCG
TGCTGGGCGTTCAGCACAACCGGCGTCGTGGAGGGCGCCAACTTCGTCGCCACGGGGAAGCTCCTCAACCTCAGCGAGCA
GCAGCTGGTCGACTGCGACCACACGGTGCGACATCATCAACTCAATTCAATC-----GCCCGCC----------
>SNPs
-----------------------S--------S----------S-S------S---SS-S---SS-------------S-
----S--SS----S----S-------S------S-SSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----------S--
-----------------------S---S-----S----S-------------S-------------------------S-
--------------S-------------S--------------------------S----S------------S------
--------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSS--------------SS------------S-------------
--------S------SS---S----S----------S---------S---------S-----------------------
-------------S----------------------------------S----------------------S--------
---S----S-----------------S--------------S------------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S--------S-------------------
------------------------------------------------------------S--------S----------
-----------------------------------------S--------S-----------------------------
--------------------------------------------------------------------------------
----------------------S-------------------------SSSSSSSSSSSSSSSSSSSSSSSS--------
--------------------------------S-----------------------------------------S-----
-----------------------------------------------------------------S--------------
-------------------------------------S------------------------------S--------SS-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S--SSSS------------------------------------------
--------S------------------------------------------------S--SSS-SSS------S------
---------------------S--S---------------------S---------------------------------
-------------------------S------------------------------------------------------
S---S------------------S----S------------------S--------------------------------
S--------------------------------------------------------S----------------------
-----------------S--------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS----S----------S-------------------------------------------------------
-------------SS---------------------S-------------------------------------------
-------------------------------------------------------S------------------------
-------------------------------------------S------------------------------------
-------------------------S------------------------------------------------------
-----------------------------------------S--------------------------------------
----S---------------------------------------------------------------------------
---------------S----------------------------S-----------------------------------
-------------------S------------------SS----------------------------------------
---S----------------------------------------------------------------------------
----------------------------------------------------------S---------------------
----------------------------------------------------------S---------------------
------------------------S-------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-SS-SS-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
---------------------------------------S---------------------S------------------
--------------S----------------------------------------------------------S------
-----------------------------S---------------------------------------S----S--S--
--------------------------------S--------------------------S-------------S------
--------------------------------------------------------------------------------
-----------------------------S-----------------------------------------------S--
----------------------------------------------------S---------------------------
--------------------------------------S------S--S------------------S------------
------------------------------------------------------------SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
--------------------------------------------------------------------------------
---------------------------------------S------------------------S---------
>forward_632
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------AGACTAGCCACAGTGGGAGT--------
--------------------------------------------------------------------------------
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>reverse_2149
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GAGGGGGCGCTA
GGAAATAC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>forward_1002
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GTGTCGCGGAAGAAAACTGG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>reverse_2299
--------------------------------------------------------------------------------
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----------------------------------------------------------TAGCGCCTCTTGTTAGTGCC--
--------------------------------------------------------------------------------
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>forward_2168
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--------------------------------------------------------------------GAGGGGGCGCTA
GGAAATAC------------------------------------------------------------------------
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>reverse_4536
--------------------------------------------------------------------------------
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-------------------------------------------------------GCTCAGAGTAAGACGCTGGG-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
