>input_sequence_27448
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----------------------------------------------------------------------------ATGA
GTACTGACGTGCTCATGAATCACATTTCTTGGTCTATAACGTTTGTATTGTAAATTTGGGCACTCTTTGAAATGAGTGCA
TTCATGTTTGGCAGGGGCAATGGACAAATTTGTGCGAATTTACAGCGGCGGGGAGCTGGTGAAGGGTCCGAATGGGGTGG
AATTCGGGGACCTCTCCGAGCAGGGTATATGGTTCAAGGCAGCACCCACATACAGTGAGCTAATTGATGCTGTGTACAAG
AAGCTCGGGCTGGAACCTACAATGCACGACCTTCGTGCACAGGGGAGGACGAATGTTGGCGGTGGCGCTCATCGGCACTT
CATCATGGTGCCTATCGACGACGATATGTCCTGGAGTAACTATGTCAAAGCAGTTTTCAATGGCACCGACTGGAATTGCC
TGGAGGTTTATGTTCAGGCAGAGGAGCGTCCATCTGCAGAGTCGGTTTCCCCAGAGCCTGCATTGCTGGACAGTGAACCA
CCGGATGCGCAGTGCCAGAATTCCCCACCACCAGATCCAGAACAGGGCGCTCCTCTTTTTACTCCTTTGATGGTGACAGT
CAATGCACCTACCGTTCATCCA---------CGACTACGAAAAACAAGGAGCACCAGGGCCCGTGCTGGCATTGGTGGGC
GGTTTGCAGGTGAAGAGGTTCAGCCTGGTCAGTACCAGTGTGGAGCTTCAGGGACAGTTGATACAACTAGCTATCTTTTA
ATTGGGCTGTATGACGAGGTTCATCGTGCTCGTGCTTTAGCAGCAGGCCAGGTACATCAATGACAACCTGTATCAATATC
ATTATATGCAAAT-AAATCTGGTATAGTGATAGTCCACTGATTTCTGTTTCCTTGATTTGGCACAGCATCTAAGTGAGCT
CAATCCTCGTAACCGTGAGCCTCTTCGGTTTGACAAGCGGTACGAACGTTACCTTAGGCCAGCTGGGTTGATGGGGTTGG
CGAACATTTGCAGGGCTGGACTGCCCTCCATTGATCGTGCACTCGTCTCTGCACTAGTTGATAGGTGGAGACCTGAGACA
CACACTTTTCACATGCCTTGTGGTGAGATTACAATCACACTACAGGATGTTGCGATGATTCTTGGGCTACCTATCTCTGG
ACATGCTGTCATTGTAAACAAAACAGAGTCCTACATTGAATTGTACCAGCGTTACCTTGGGAAGACACCTCCTTCTGATA
AGTCCCGTCCTGGGTTGAGGGTTGCATGGGTCAGAGCCGAGTTTAATAAGTGCCCTGAAGACGCCGACGAGGAGACCGTA
AAGCAGCATGCAAGGGCATACATCCTTAGCCTGGTTGGTGGTCTATTGTTTCCTGATGCCTCTGGTGATAGGTACACCGT
ATATCCCTTTCCGCTGATAGCTGATCTTGAGAACATTGGTTCATACAGTTGGGGTTCTGCTACTCTGGCATATCTCTACA
GGGCAATGTGTGATGCTTGCAGGAGGCAATCAGATCAAAGTAATCTGACTGGTTGCCTTCTGCTCCTTCAGTTCTGGTCA
TGGGAGCGCTTCCCAATCGGCAGGCCAGATATGCTAAAGCCGAAATTCCCAAACGTCGATGAGCTAGAGGATGACAGGGA
TAGACCAACAGTTGGTCTCAGATGGGTTGTGGGGGCGTGCACGTATCGGTCAGCTCCAGCACGTTGCTACGAGCACTTTA
CAAATGAGTTCGACTTATTAACAGATGACCAGGTTGTTTGGAGCCCATATAGGGACGACCGCGTGAAGACACTACATCTT
GCACCTATATGTACCCAGGATTCTCATTTGTGGCTAACTCAAGCACCTCTAGTTTTTTTCTTTATGGTGGAGGTTTACAC
ACCGGAGAGAGTGATGCGTCAATTTGGTCTCCATCAGGAATGCCCGCCACCATTTCGGGACACCAGCGTGGAACTCCATT
GGTATGTCCAAAGATATGTCTGTTGTCTGTGCATGATTGTTTTCGATTCGAGGAAGTTGGAAATTATGTACCAGTAGCCA
CCCATAAGGTTTTCTGATGATTTTGCAGGTGTTGCCGTGGAAAGGTCCGTAGTGATTGGGCAGATAAGCACAAGTCTTTT
GTGGATATGTGGGAAGTAAAGGAGCAGCATGTTGTCATGGAAGAACGACCATACGATCATGCCAACTACATGGATTATTT
GCGGTGGTACAGACGGTCGACACGTATCCGCCTCTGCACACCAAGAATAAGTAATGGCCACCAGGATGGGGCATCCGTGC
GAACTGCAACAGCTGACAATGAAGATTCTTTGCGTGCTTCAAAGCTTCGGTACACCCCCAGAGCTCATCTGATCCACTCA
GTGGTACGATATTCTACTTGTAAGATGTGTTTAATTTTCTCATGACG-CACACATTGTTATCAAGCGCAGAGATTCAGAT
CATCTTCTTCTGCATACACATGAATATTTCTGACACCTCCATGTTTCATCCCAGACCGACAAACTCACTATTCTGGCGAA
GGAGGCAGCTTCACAAAAGGGCTGCTCCAGAGGCGAATGTAGCGCTTTCATTGAGCGAGTCACTAGAACGTGTGTAGAAC
TTGTTGGGGAACTTGGCGGGTCATCACTTTGCGACATTGCTGCTGCGGTTCCAGATTCAACAACTATTGCAGCTGAACAG
GGGTCCGAGGGCCAGAGGGACACAGAGGATGAGTTAAATAACTCCATGGTGCCTGATCAGGAGAATGAGTCGGGCCCTGT
TCGTGAGAAGCGGACTCGATTCCAGGTTGATCATACACAAGTGAACAGCAGGGTCCATTCAAGGTCACCAAGCAAGAGGA
GGAGGGGTGGACCAGCTCCAAGATGA------------------------------------------------------
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>chr3B_1_TraesCS3B01G112400
GACGTAGTTTACCATCCAACACGGATTTGTATTTGTCCGCGGACATGTTCACATGTCCGATTCCCACAAACCGGAAGTAA
AGTTAGGAAATGTTTGCGGTAGTCCGGACGTCCGCTTCACCAATTAAATGCCACCATACACAATTGATCAGTTATTTGAC
GGGAGGATTGTAGCTCACAAGCTATTTTAAAGTTGATAGAGTGAACATTTGAGGTATATAAAGTTGGACCACCGGCTTTC
GTATTCATGTTTGCAAACACAACCACGGACGTTTGCGCTGTCCATTTTG-----------AGGAGACGCCCTAACTCTAT
TATTTC------TATTCATTCATCTAGACGCAACTTCTGAAATTTCTCCA--TTTTTTTGTATGTCCGGAAGAGCTATGT
GTCATTTCCTTTG--------TAGACGCTGAACTCTCCAGCGTTGGAGACCAAAACCGCAGCAGTGATAAACGCTTGACG
CGAGCTCCCACCTACTCGCCGCCACCGTCCCCGGCGACGTCGGCGCCGCCGCGGAACCCTCCCGCGCCTTTTCGGTAAGC
TCCGCCCCTCCCTCCCGGCCAGGCGCGCTCGTCCGTCACCCGCCCTGGAGCCACCCTAGCCCTCTCGCGCGAGCTGTACT
CGCCGGAGATTTGGGGGGCGATTTTCGATTACGAGTTCTTCCGATTTCACTTTGGATGCTGGTGCGGCCTCTGCGAGCAG
CGAGAACAAAGCTAGGCTGTTGTGTT-CGGCACCAGTGGTATAGC----TTAGCAGTGGGAGTGAAGTGGGGGGTGGGGG
GAAAGCTTAGCTAGGGTTTTCAGCAGCGGGGAACTTGAGACGAACGGCGCCTATG-TGATTGGGGCCAAGAATACTAGTT
CCTTCGATTCTAATACTAATCCTAGT-TTCTTTCCTTTATTACCCTTGGAGTGGTTCTAATCAATGGTGACTCCTCTACT
TAGCTTGGCACCTCAATTGGGGGAACGAACTTCCTTTTGGTG--TTGTCCAATTTGGTGCTCCATGATTTGCCGGAATGA
GTACTGACGTGCTCATGAATCACATTTCTTGGTCTATAACGTTTGTATTGTAAATTTGGGCACTCTTTGAAATGAGTGCA
TTCATGTTTGGCAGGGGCAATGGACAAATTTGTGCGAATTTACAGCGGCGGGGAGCTGGTGAAGGGTCCGAATGGGGTGG
AATTCGGGGACCTCTCCGAGCAGGGTATATGGTTCAAGGCAGCACCCACATACAGTGAGCTAATTGATGCTGTGTACAAG
AAGCTCGGGCTGGAACCTACAATGCACGACCTTCGTGCACAGGGGAGGACGAATGTTGGCGGTGGCGCTCATCGGCACTT
CATCATGGTGCCTATCGACGACGATATGTCCTGGAGTAACTATGTCAAAGCAGTTTTCAATGGCACCGACTGGAATTGCC
TGGAGGTTTATGTTCAGGCAGAGGAGCGTCCATCTGCAGAGTCGGTTTCCCCAGAGCCTGCATTGCTGGACAGTGAACCA
CCGGATGCGCAGTGCCAGAATTCCCCACCACCAGATCCAGAACAGGGCGCTCCTCTTTTTACTCCTTTGATGGTGACAGT
CAATGCACCTACCGTTCATCCA---------CGACTACGAAAAACAAGGAGCACCAGGGCCCGTGCTGGCATTGGTGGGC
GGTTTGCAGGTGAAGAGGTTCAGCCTGGTCAGTACCAGTGTGGAGCTTCAGGGACAGTTGATACAACTAGCTATCTTTTA
ATTGGGCTGTATGACGAGGTTCATCGTGCTCGTGCTTTAGCAGCAGGCCAGGTACATCAATGACAACCTGTATCAATATC
ATTATATGCAAAT-AAATCTGGTATAGTGATAGTCCACTGATTTCTGTTTCCTTGATTTGGCACAGCATCTAAGTGAGCT
CAATCCTCGTAACCGTGAGCCTCTTCGGTTTGACAAGCGGTACGAACGTTACCTTAGGCCAGCTGGGTTGATGGGGTTGG
CGAACATTTGCAGGGCTGGACTGCCCTCCATTGATCGTGCACTCGTCTCTGCACTAGTTGATAGGTGGAGACCTGAGACA
CACACTTTTCACATGCCTTGTGGTGAGATTACAATCACACTACAGGATGTTGCGATGATTCTTGGGCTACCTATCTCTGG
ACATGCTGTCATTGTAAACAAAACAGAGTCCTACATTGAATTGTACCAGCGTTACCTTGGGAAGACACCTCCTTCTGATA
AGTCCCGTCCTGGGTTGAGGGTTGCATGGGTCAGAGCCGAGTTTAATAAGTGCCCTGAAGACGCCGACGAGGAGACCGTA
AAGCAGCATGCAAGGGCATACATCCTTAGCCTGGTTGGTGGTCTATTGTTTCCTGATGCCTCTGGTGATAGGTACACCGT
ATATCCCTTTCCGCTGATAGCTGATCTTGAGAACATTGGTTCATACAGTTGGGGTTCTGCTACTCTGGCATATCTCTACA
GGGCAATGTGTGATGCTTGCAGGAGGCAATCAGATCAAAGTAATCTGACTGGTTGCCTTCTGCTCCTTCAGTTCTGGTCA
TGGGAGCGCTTCCCAATCGGCAGGCCAGATATGCTAAAGCCGAAATTCCCAAACGTCGATGAGCTAGAGGATGACAGGGA
TAGACCAACAGTTGGTCTCAGATGGGTTGTGGGGGCGTGCACGTATCGGTCAGCTCCAGCACGTTGCTACGAGCACTTTA
CAAATGAGTTCGACTTATTAACAGATGACCAGGTTGTTTGGAGCCCATATAGGGACGACCGCGTGAAGACACTACATCTT
GCACCTATATGTACCCAGGATTCTCATTTGTGGCTAACTCAAGCACCTCTAGTTTTTTTCTTTATGGTGGAGGTTTACAC
ACCGGAGAGAGTGATGCGTCAATTTGGTCTCCATCAGGAATGCCCGCCACCATTTCGGGACACCAGCGTGGAACTCCATT
GGTATGTCCAAAGATATGTCTGTTGTCTGTGCATGATTGTTTTCGATTCGAGGAAGTTGGAAATTATGTACCAGTAGCCA
CCCATAAGGTTTTCTGATGATTTTGCAGGTGTTGCCGTGGAAAGGTCCGTAGTGATTGGGCAGATAAGCACAAGTCTTTT
GTGGATATGTGGGAAGTAAAGGAGCAGCATGTTGTCATGGAAGAACGACCATACGATCATGCCAACTACATGGATTATTT
GCGGTGGTACAGACGGTCGACACGTATCCGCCTCTGCACACCAAGAATAAGTAATGGCCACCAGGATGGGGCATCCGTGC
GAACTGCAACAGCTGACAATGAAGATTCTTTGCGTGCTTCAAAGCTTCGGTACACCCCCAGAGCTCATCTGATCCACTCA
GTGGTACGATATTCTACTTGTAAGATGTGTTTAATTTTCTCATGACG-CACACATTGTTATCAAGCGCAGAGATTCAGAT
CATCTTCTTCTGCATACACATGAATATTTCTGACACCTCCATGTTTCATCCCAGACCGACAAACTCACTATTCTGGCGAA
GGAGGCAGCTTCACAAAAGGGCTGCTCCAGAGGCGAATGTAGCGCTTTCATTGAGCGAGTCACTAGAACGTGTGTAGAAC
TTGTTGGGGAACTTGGCGGGTCATCACTTTGCGACATTGCTGCTGCGGTTCCAGATTCAACAACTATTGCAGCTGAACAG
GGGTCCGAGGGCCAGAGGGACACAGAGGATGAGTTAAATAACTCCATGGTGCCTGATCAGGAGAATGAGTCGGGCCCTGT
TCGTGAGAAGCGGACTCGATTCCAGGTTGATCATACACAAGTGAACAGCAGGGTCCATTCAAGGTCACCAAGCAAGAGGA
GGAGGGGTGGACCAGCTCCAAGATGAAACCTGCTTGGTGAGTGATTCAGAATTACAGTTTTGCCGCTCTTGTTGGACAGC
CGTGACATACTTCATTCTATTTTATCATGTTCTCTTTGGTCTGCCTCTGCTTTAGTTGAACCATCGCGCAAATGATTCTT
GGACCATTATTTCTCTGCTTACTGCTGTTGTTTGAAAATTACAGGGCTTTGTGTGTTTCAGTCATGTAAGGTCGTGGTCT
GAAGAAAAGGTGTGATGGTTAGCGACTCCAGAAGTTCATGCCTCTGGCAAGTTTAACATTGGCTGCTGTAGAAGCGATGG
AGATCGCAAATCTGCAGTGAGAGGAGTATGGTTCTCGTTTTCTATTTTTTCTTGTAGGCAGTCGTAGC-------ATGGA
TCCCGTGTCTATATGTCCATGGTCTACAATGAACTCCTCCG---------TTGGCACAGCCATATGGTGAACAACTATAG
CTCATTCATCCCATTTGTGGGACTGAAACTTGAAGTGAACTCATTCTACCTGACTGGTGGTTACTCCCAGGCTTTGTTGT
CCCTGATGCTCCGGGGAGCGCATGTTGCAGAGATCGACAGAGCAATCGTCTCAGATGA---------TTTCCTCGG-CAC
ACCTTCAAAGAGTTTCCTCCACATTTTGATTCTCCAGCGAATGTTATCTGCGATCAGCTTCGCTTTGACCGGGGAAAACC
AGATAGGTGGAAACCGGTTCTGGCCTCGGTCCGATGTTCCCTGTTTTTCTGGTTTCTGTATCGTATGCGGCGATGGCTGT
TTTAGGGAATGAGGCTTCAGTGTTGGTCCATGGAACCATTTGTTGTGCTGAATTGTGCATGTTGATCCATGTAGTAGTAT
CTCCTTAGCCATGGTTACAGTTTGGGAAAGCGTCTACTCCCTCCGTCTAGGTGTGTAAGTCATCTTACGAAAACCAAATA
ATCCCAAAACACATAGCGCGGTGCATTAAATTCTACCTCGTTTCTTGTTTCTTGACATATCAACCAATAAGAGATGTGGG
GTGTGCATGTTT
>chr3A_64
---------------------------------------------------------------CCACAAATCGGAAGTAA
AGTTAGGGAATGTTTGCGGTAGTCTGGATGTCCGCTTCACCAATTAAATGCCACCACACACAATTGATCGGTTATTTGAC
TGGAGGATTGCAGCTCACATGCTATTTTAAAGTTGATAAGATGAACATTTAAGGTATA--AAGTTGGATGACCAGCTTTC
GTATTCGTGTTTGTGAACACAATCATGGACATCTGCGCTGTCGATTTTGAGGGATTGCGTAGGAGATGCCCTAA--CTCT
ATTATTTCTATTTATTTATTCATCTAGACACAACTTCTGAATGTTCGCAATTTTTTTTTGTATGTACGGGAGAGTCATGT
GTCATTTAGTCATTTCCTTACTAGACGCTGAACACTCCAGCGTCGGAGACCAAAACCGCAGCAGCGGCAAACGCTTGACG
CGAGCTCCCACCTACTCGCCGCCACCGTCCCTGGCGACGTCGGCGCCGCCGCGGAACCCTTCCGCGCCTTTCCGGTAAGC
TCCGCCCCACCCTCCCGGACAGGTGCGCTCGTCCGTCGCTCGCCCCGGAGCCACCATAGCCCTCTCGCGCGAGCTGTACT
CGCCGGAGATTTGGGGGGAGATTTTCAATTACGAGTTCTTCCGATTTCACTTTGGATGCTGGTGCGGCCTCTGTGAGCGG
CGAGGACAAAGCTAGGCTGTTGCGTT-GGGCACCCTTGGTTTAGC----TTAGCAGTGGGAGTGAAGTTGGGGGA-----
-AAGGTT-AGCTAGGGTTTGCAGCAGCGGGGAACTTGAGACGAACGGCGCCTATGGTGATTGGGACCAAGAATCCTAGTT
CTTTGGATTCTAAAATACGAATCCTAGTTCTTTCCTTTCTCGCCCTTGGAGTGGTTCTAGGCAATGGTGACTCCTCTAGC
GAGCTTGGCGCCTCGATTGGGGGAACGAAGTTCCTTTTGGTG--TTGTCCAATTTGGTGCTCCATGATTTGCCGGAATGA
GTACTGACATGCTCATGAATCACACTTTTGGTTTAGATA--TTTGTATTGCAAATTTGGGCACTCTTTGAATTGGATGCA
TTCATGTTTGGCAGGGACAATGGACAAATTTGTGCGAATTTACAGCGGTGGGGAGCTGGTGAAGGGTCCAAATGGGGTGG
AATTCGGGGACCTCTCCGAGCAGGGTATATGGTTCAAGGCAGCACCCACATACAGTGAGCTGATTGACGCCGTGTACAAG
AAGCTTGGGCTGGAACCGGCGACACACAATGTCCGCGCACAGGGGAGGACGAATGTTGGCGGCGGTGCTCATCGGCACTT
CATCATGGTGCCTATCAACGACGATATGTCCTGGAGTAACTATGTCAAAGCAGTTTTCAATGGCACCGACTGGAATTGCC
TGGAGGTTTATGTTCAGGCAGAGAAGCATCTATCTCCAGAGCCGGTTTCCCCAGAGCCTGCATTGCTGGACAGTGAACCA
CTGGATGCGCAGCATCAGAATACCCCACCGCGAGATCCAGAACAGGGTGCTTCTCTTTTTGCTCCTTCGATGGTGACCGT
CAATGCACCAACCGTTCATTCTCAACATGCTCGACTACGAAGAATAAGGAGCACCAGGGCCCGTGCTGGCATTCGTGGGC
GGTTTGCAGGTGAAGAGGTTCAGTCTGGTCAGAACCAGTGTGGAGCTTCAGGGACAGTTGATACAACTAGCTCTCTTTTA
ATTGGGCTGTATGACGAGGTTCATCGTGGCCGTGCTTTAGCATCAGGCCAGGTAGATCAATGACAACCTGTATCAT----
-TTATATGCAAAT-AAATGTGTTATAGTGATAGTCCACTGATTTCTGTTTCCTTGATTTGGCACAGCATCTAAGTGAGCT
CAATCCTCGTAACCGTGAGCCTCTTCGGTTTGACAAGCGGTACGAACGTTACCTTAGGCCAGCTGGGTTGATGGGGTTGG
CGAATATTTGCAGGGCTGGACTGCCCTCCATTGATCGTGCACTCGTCTCTGCACTAGTTGATCGGTGGAGACCTGAGACA
CACACTTTTCACATGCCTTGTGGTGAGATTACAATCACACTACAGGATGTTGCGATGATTCTTGGGCTACCTATCTCTGG
CCATGCTGTCATTGTAAACAAAACAGAGTCCTACATTGAATTGTACCAGCGTTACCTTGGGAAGGCACCTCCTTCAGATA
AGTCCCGTCCTGGGTTGAGGGTTGCATGGGTCAGAGCTGAGTTTAATAAGTGCCCTGAAGATGCCGACGAGGAGACCATA
AAGCATCATGCAAGGGCATACATCCTTAGCCTGGTTGGTGGTCTATTGTTTCCTGATGCCTCTGGTGATAGGTACACTGT
CTATCCCTTTCCGCTGATAGCTGATCTTGAGAACATTGGTTCATACAGTTGGGGTTCTGCCACTCTGGCATATCTCTACA
GGGCAATGTGTGATGCTTGCAGGAGGCAATCAGATCAAAGTAATCTGACTGGTTGCCTTCTGCTCCTTCAGTTCTGGTCA
TGGGAGCGCTTCCCAATCGGCAGGCCAGATATGCTAAAGCCGAAATTCCCAAACGTCGATGAGCTAGAGGATGACAGGGA
TAGACCCACGGTTGGTCTCAGATGGGTTGTGGGGGCGTGCACGTATCGGTCAGCTCCAGCACGTTGCTATGAGCACTTTA
CAAATGAGTTCGACCTATTAACAGATGACCAGGTTGTTTGGAGCCCATATAGGGAGGACCGCGTGAAGACACTACATCTT
GCACCTATATGTACCCAGGATTCTCATTTGTGGCTAACTCAAGCACCTCTAGTTTTTTTCTTCATGGTGGAGGTTTACAC
ACCGGAGAGAGTGATGCGTCAATTTGGTCTCCATCAGGAATGCCCGCCACCATTTCGGGACACCAGCGTGGAACTCCATT
GGTACGTCCAAAGATATGTCTGTTGACTGTGCATGATTGTTTTCGATTCGAGGAAGTTGGAAATTATGTACCAGTAGCCA
CCCATAAGGTTTTCTGATGATTTTGCAGGTGTTGTCGTGGAAAGGTCCGTAGTGATTGGGCAGATAAGCATAAGTCTTTT
GTGGATATGTGGGAAGTAAAGGAGCAGCATGTTATCATGGAAGAACGACCATACGATCATGCCAACTACATGGATTATTT
GCGGTGGTACAGACGGTCGACACGTATCCGCCTCTGCACACCGAGAATAAGTAATGGCCACCAGGATGGGGCATCCGTGC
GAACTGCAACAGCTGATGATGAAGATTCTTTGCGTGCTTCAAAGCTTCGGTACACCCCCAGAGCTCATCTGATCCACTCA
GTGGTAAGATATTCTCCTTGTAAGATGTATTTAATTTTCTCATGACGACACACACTATTATCAAGCGCAGAGATTCAGAT
CATCTTCTTCTGCATACACATGAATATTTCTGACACCTCCATGTTTCATTCCAGACTGACAAACTCACTATTCTGGCGAA
GGAGGCAGCTTCACAAAAGGGGTGCTCCAGAGGCGAATGTAGCGCTTTCATTGAGCGAGTCACTAGAACGTGTGTAGAAC
TTGTTGGGGAACTTGGCGGGTCATCACTTTGCGACATTGCTGCTGCGGTTCCAGATTCAACAACTATTCCAGCTGAACAG
GGGTCTGAGGGCCAGAGGGACACAGAGGATGAGTTAAATAACTCCATGGTGCCTGATCAGGAGAATGAGTCGGGCCCTGT
TCGTGAGAAGCGGACTCGATTCCAGGTTGATCATACACAAGTGGACAGCAGGGTCCATTCAAGGTCACCAAGCAAGAGGA
GGAGGGGCGGACCAGCTCCAAGATGAAACCTACTTGGTGAGTGGTTCAGAA--ACAGTTTTGCCACTCTTGTTGGACAGT
CGTAACATAGTTCCTTCTATTTCATCATGTTTTCTTCAGTCTGCCTCTGCTGTAGTTGAACAATTGCACAAATGATTCTT
GGACCATTATTTCTCTGCTTACTGCTTTTGTTTGAAAATTACAGGGC-TTGTGTGTTTCAGTCATATAAGGTCGTGGTCT
GAAGAAAGGGTGTGATGGTTAGCGACTCCAGAAGTTCATGCCTCTGACAAGTTTAACATTGGCTGCTATAGAAGCGATGG
AGATCGCAAATCTGCAGTCAGAGGAGTATGGTTCTCGTTTTCTATTTTTTCTTGTAGGCAGTCGTAGCATGGATGATGGA
TCCCGTGTTTATATGTCCATGGTCTACAATGAA---CTCCG---------TTGGCACAGCCATATGGTGAACTATT---G
CTCATTCATCCCATTTGTGGGACTGAAACTTGAAGTGAACTCTC--TACCCGACTGGTGGTTACTCCCAGGCTTTACTGT
CCCTGATGCGCCCGGGAGCGCATGTTGCAGAGATTGACAGAGCAATCGTCTCAGACGACATATGAGGTTTCCTCGG-CAC
ACCTTCAAGGAGTTTCCTCCACATC-TGATTCTCCAGCAAATGTGATGTATGATCAGCTTCGCTTCGACCAGGGAAAAAC
AGATAGGTTGTAACCGTTTCCGAATTCGGTCCGATGTTCCCGC-TTTTCTGGTTTATGCATCAGTGGCGGCGACGACTGC
TTCAGGGGATGAGGCTTTAATGTTGGTCCATGGAACCATTTGGTGTACTGAATTGGGCATGTTGA---------------
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------------
>chr3D_290
--------------------------------------------------------------------------------
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------------------------------------------------------------AGGAGATGCCCTAA--CTAT
TATTTC------TATTTATTCATCTAGACACAACCTCTGAATTTTCTCGA-TTTTTTTTGTATGTACTGGAAAGTTATGC
GTCATTTCCTTTG--------TAGACGCTGAACTCTCCAGCGTTGGAGACCAAAAACGCGACAGTGACAAACGCTTGACG
CGAGCTCCCACCTACTCGCCGCCACCGTCCCCGGCGACGTCGGCGCCGCCGCGGAACCCTCCCGCGCCTTTTCGGTAAGC
TCCGCCCCTCCCTCCCGGACAAGCGCGCTCGTCCGTCACCCGCCCTGGAGCCACCCTAGCCCTCTCGCGCGAGCTGTACT
CGCCGGAGATTTGGGGGGCGATTTTCAGTTACGTGTTCTTTCGATTTCACTTTGGATGCTGGCGCGGCCTCTGTGAGCAG
CGGGAACTAAGCTAGGCTGTTGTGTTTGGGCACCCATGGTTTAGCTTAATTAGCAGTGGGAGTGAAGTGGGGGAA-----
-AAAGTTTAGCTAGGGTTTGCAGCAGCGGGGAACTTGAGACGAACGGCGCCTACG-CGATTGGGACCAAGAATACTAGTT
--------------------------------------------------------------AATGGTGACTCCTCTAGT
TAGCTTGGCACCTGGATTGGGCGCATGAACTTTCCCCCCTATTTTTGCCCAATTTGGTACTCCATGATTTGCCCACATGC
TAG---------TCACGCATCACATTTCTTGGTTTATAACGTTTGTATTGTAAATTTGGGCACCCTTTGAAATGGGTGCA
TTAATG-TTTGCAGGGGCAATGGACAAATTTGTGCGAATTTACAGTGGTGGGGAGCTGGTGAAGGGTCCAAATGGGGTGG
AATTCGGGGACCTCTCGGAGCAGGGTATATGGTTCAAGGCAGCACCCACATACAGTGAGCTGATCGACGCCGTGTACAAG
AAGCTCGGGCTGGAACCAGCGACACACAATGTCCGCGCACAGGGAAGGACGAATGTTGGCGGCGGCGCTCATCGGCACTT
CATCTTGGTGCCTATCGATGACGATATGTCCTGGAGTAACTATGTCAAAGCAGTTTTCAATGGCACCGACTGGAATTGCC
TGGAGGTTTATGTTCAGACAGAGGAGCGTCCATCTGCAGAGCCGGTTTCCCCAGAGCCTGCATTGCTGGACAGTGAACCA
CTGGATGCGCAGCATCAGAATACCCCACCGCGAGATCCAGAACTGGGCGCTTCTCTTTTTGCTCCTTCGATGGTGACCGC
CAATGCACCAACCGTTCATCCTCAACATGCTCGGCTACGAAGAATAAGGAGCGCCAGAGCCCGTGCTGGCATTCGTGGGC
AGGTTGCAGGTGAAGAGGTTCAGTCTGGTCAATACCAGTGTGGAGCTTCAGGGACAGTTGATACAACTAGCTGTCTTTTA
ATTGGGCTGTATGACGAGGTTCATCGTGCTCGTGCTTTAGCAGCAGGCCAGGTACATCAATGACAACCTGTATCAGTATC
ATTATATGCAAACAAAATGTGGTATAGTGATAGAGGACTGATTCTTGTTTCCTTGATTTGGCACAGCATCTAACTGAGCT
CAATCCTCGTAACCGTGAGCCTCTCCGGTTTGACAAGCGGTATGAACGTTACCTTAGGCCAGCTGGGTTGATGGGGTTGG
CGAACATTTGCAGGGCTGGACTGCCCTCCATTGATCGTGCACTCGTCTCTGCACTAGTTGATCGATGGAGACCTGAGACA
CACACTTTTCACATGCCTTGTGGTGAGATTACAATCACACTACAGGATGTTGCGATGATTCTTGGGCTACCTATCTCTGG
CCATGCTGTCATTGTAAACAAAACAGAGTCCTACATTGAATTGTACCAGCGTTACCTTGGGAAGGCACCTCCTTCAGATA
AGTCCCGTCCTGGGTTGAGGGTTGCATGGGTCAGAGCTGAGTTTAATAAGTGCCCTGAAGATGCCGACGAGGAGACCGTA
AAGCAGCATGCTAGGGCATACATCCTTAGCCTGGTTGGTGGTCTATTGTTTCCTGATGCCTCTGGTGATAGGTACACCGT
CTATCCCTTTCCGCTGATAGCTGATCTTGAGAACATTGGTTCATACAGTTGGGGTTCTGCTACTCTGGCATATCTCTACA
GGGCAATGTGTGATGCTTGCAGGAGGCAATCAGATCAAAGTAATCTAACTGGTTGCCTTCTGCTCCTTCAGTTCTGGTCA
TGGGAGCGCTTCCCAATCGGCAGGCCAGATATGCTAAAGCCGAAATTCCCAAACGTGGATGAGCTAGAGGATGACAGGGA
TAGACCCACAGTTGGTCTCAGATGGGTTGTGGGGGCGTGCACGTATCGGTCAGCTCCAGCACGTTGCTATGAGCACTTTA
CAAATGAGTTCGACTTATTAACAGATGACCAGGTTGTTTGGAGCCCATATAGGGACGACCGTGTGAAGACACTACATCTT
GCACCTATATGTACCCAGGACTCTCATTTGTGGCTAACTCAAGCACCTCTAGTTTTTTTCTTTATGGTGGAGGTTTACAC
ACCGGAGAGAGTGATGCGTCAATTTGGTCTCCATCAGGAATGCCCGCCACCATTTCGGGACACCAGCGTGGAACTCCATT
GGTATGTCCAAAGATATGTCTGTTGTCTGTGCATGGTTGTTTTCAATTCGAGGAAGTTGGAAATTATGTACCAGTAGCCA
CCCATGAGGTTTTCTGATGATTTTGCAGGTGTTGCCGTGGAAAGGTCCGTAGTGATTGGGCAGATAAGCATAAGTCTTTT
GTGGATATGTGGGAAGTAAAGGAGCAGCATGTTATCATGGAAGAACGACCATACGATCATGCCAACTACATGGATTATTT
GCGGTGGTACAGACGGTTGACACGTATCCGCCTCTGCACACCGAGAATAAGTAATGGCCACCAGGATGGGGCATCCGTGC
GAACTGCAACAGCTGATGATGAAGATTCTTTGCGTGCTTCAAAGCTTCGGTACACCCCCAGAGCTCATCTGATCCACTCA
GTGGTAAGATATTCTCCTTGTAAGATGTATTTAATTTTCTCATGACGACACACACTATTATCAAGCGCAGAGATTCAGAT
CATCTTCTTCTGCATACACATGAATATTTCTGACACCTCCTTGTTTCATCCCAGACTGACAAACTCACTATTCTGGCGAA
GGAGGCAGCTTCACAAAAGGGCTGCTCCAGAGGCGAATGTAGCGCTTTCATTGAGCGAGTCACTAGAACGTGTGTAGAAC
TTGTTGGGGAACTTGGCGGGTCATCACTTTGCGACATTGCTGCTGCGGTTCCGGATTCAACAACTATTGCAGCTGAACAG
GGGTCCGAGGGCCAGAGGGACACAGAGGATGAGTTAAATAACTCCATGGTGCCTGATCAGGAGAATGAGTCGGGCCCTGT
TCGTGAGAAGCGGACTCGATTCCAGGTTGATCATACACAAGTGAACAGCAGGGTCCATTCAAGGTCACCAAGCAAGAGGA
GG---GGTGGACCAGCTCCAAGATGAAACCTGCTTGGTGAGTGATTCAGAATTACAGTTTTGCCGCTCTTGTTGGACAGC
CGTGACATACTTCATTCTATTTTATCATGCTCTCTTTGGTTTGCCTCTGCTTTAGTTGAACCATCGGGCAAATGATTCTT
GGACCATTATTTCTGTGCTTACTGCTTTTGTTTCAAAATTACAGGGC-TTGTGTGTTTCAGTCATATGAGGCTGTGGGCT
GAAGAAAGGCCATGATGGTTAGCGTGTCCAGAAGTTCATGCCTCTGACAAATTTAACATTGGCTGCGATAGAAGCGATGG
AGATCGCAAATCTGCAGTCAGAGGAGTATGGTTCTCGTTTTCTATTTTTTCTTGTAGGCAGTCGTAGCATGGATGATGGA
TCCCGTGTTTATATGTCCATGGTCTGCAATGAA---CTCCTTCATTGGCATTGGCACAGCCATATAGTGAACTATT---G
CTCATTCATCCCATTTGTGGGACTGAAACTTGAAGTGAACTCATTGTACCTGACTGGTGGTTACTCCCAGGCTTTGTTGT
CCCTGATGCTCCCGGGAGCGCATGTTGCAGAGATTGACAGAGCAATCGTCTCAGACGACATATGAGGTTTCCTCTGTCAC
ACCTTCAAGGAGTTTCCTCCACATC-TGATTCTCCAGCAAATGTGATGTATGATCAGCTTCCCTTCGACAGGGGAAAAAC
AGATAGGTTGTAACCGGTTCTGGATTCGGTCCGATGTTCCCGC-TTTTCTGGTTTCTGCATCATTGGCGGCGATGACTGC
TTCAGGGGATGAGGCTTTAATTTTAGTCCATGGAACCATTTGGTGTACTGAATTGGGCATGTTGATCTATGTA-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S---------
-------S----------------S---S---------------------------S------------S----------
S---------S--------S------------------SSS---------S-------SS--------SS---S------
------S------SS-------S--S----S-S---------S-----------------------S-------SS----
----------------S------------S-----------S------S----------------S---S----S-----
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------S----------------------------------------------S------
---------------------------S------SS----S---------------------------------SSSSSS
S----S-------------S--------------------------------------------S---------------
-S--S--------S-SSSSSSSSSSS------------S-SS-----------------SS-----------------S-
--------------S-----------------------------------------------------------------
--------S------------------------S----------------------------------------S-----
------------------------------------------------S--------------------S----------
-------------------------------------------------------------S-----S--S---------
-----------------SS-S-SS---S-SS-S--S--------------------------S-----------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
-S----------SSS------S-------S-S-------------------S--------S------S---------S--
---------S-----------S-------------------S--S----------------------------S------
-----------------------S------------------------------------------------S-------
---------------------------------------------------------------------------S----
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
S---------------------------------------------------------------S----------S----
-------------------------------------S-----------------------S------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S--------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
---------------------------------S----------------------------------------------
------------------------------------------S-------------------------------------
----------------SS--------------------------------------------------------------
------S--------S------------S-------------------------S-S-----------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S--------------------S-----------------S--------------
-------S--------------------------------------S--------------------S------------
------------------S-------------------------------------------------------------
--------S------------------------SSS------------------------------------S-S-SSS-
---------------------------------------------S----------------------------------
------------S---------------------S--------------------S------------------------
--------S---------------SS------------S-----S--S-SS--------------S------------S-
--------S-S------------SS----------------SSS--------------S---S-SS---------S---S
--S----S---------S-S----------------------S---S--------S-----------S-----SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS
>forward_247
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ACCACCGGCTTTC
GTATTCA-------------------------------------------------------------------------
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------------
>reverse_1271
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TGTGTACAAG
AAGCTCGGGC----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>forward_1169
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------TTGTGCGAATTTACAGCGGC-------------------------------
--------------------------------------------------------------------------------
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------------
>reverse_2647
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------AACAGTTGGTCTCAGATGGGT-----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------
>forward_1304
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TCGGGCTGGAACCTACAATG--------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>reverse_3154
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------GTCATGGAAGAACGACCATACG-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>forward_2225
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------CCAGCGTTACCTTGGGAAGA---------------
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------------
>reverse_4088
--------------------------------------------------------------------------------
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-------AGGTGTGATGGTTAGCGACTC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
