>input_sequence_27381
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-------------------------------------CGCGCTCGGCGGTGGCGCTACCAGTCTCCTTCGCGATCCGGTG
GTGCCGAGACCCACGC-----GTCAGTTGTGCTCGCTCTCCCACCTATATCCCTCCCGCCTCTC------CCTCCCCGCC
CGCTGGAGTAGAAGT------AGTAGGAGTAATCCGCTCGCCGCCGCTGCGGTTATCCGTTCGAGGTTGATGCGCTGCAA
AGTTTCCTCTTCCGGGCTGGCTG----GCTGGCTGGGCTGGAGTGACTCACGTAAACTTCGCCGCTCCGCTCCGGCCACC
GGCCTTTCCATCTTTTGCCGCTGCTCCCTTACCTGCCCCGCAACCGCGGGTTGATTGCCTGCTTTAATCTCGTGCCTTTC
CTCTCTCTCATTTTCCAG-----------------TCGGCCCCGTTCATTTCTCCTGGATTTCGCGTACAAATCGCCCTT
CCCTTTTCCATTCCAATTAATACTGCACGAGCCGTGATGTCGCGTACGGAGTCGACAAGCTGTATATAAGCCATCGCTGT
GTTTCTTCCGTCCTT----CCTCTAGGTTTCTCCTCCCATAGCTTCCTGTCCCCAAAAGCTCCTTTTCTCTCGACTCAAC
TCAACTCGGAGGAGCCTCTGCGCCAGTGCGCCGCGCCCTCGGGCATAGTGGGCTAAGTAGTGCCTTCTCCTTCTGAGATT
CTTCATCTTACTGACGCTTCGTTGCGCTGA---------------------------CGCTTGTTCGTGTCCGCAGAGAT
GGGGCGTGCCATGCGGTGGCTCAAGAGGCTGCTCACGGGCAGGAAGGAGGCGCACGGAGGCGGCAAGGAGATCCATGCCG
CGACCGACTGGCATGACG---CGGCGGTGAAGGAGTCCACCAAGAGATGGAGCTTCGTGAAGCAGAGGAAGAGCGGGGTT
GACGCCGGGAAGCGGCCCTCAGAGCCTCTCGCCGCCGCGCTGGAGGTGAAGCCATGCCGCTGTGCCGGCGGCGAGCAGGC
GGGAGCACGCGAGGAGAAGGCGGCCGTCGTGATTCAGAAAGCCTTCAGAGGCTACCTGGTATGCTCTTGATCATCATCCC
GTTGATTC-------ATATCTCCATCGTACGTCATCTCTGTATAAGTTGGTTGGGATACTGCTGACCGCGTGCGTGTCCG
AGCTTCGGTTATGTTCATCATTTCTTGCTATCCGGTGTGCTGAAATGGCTTGAACAGTCCCGGTGTGCGCCCGAATTCTG
ACGTTAACGATGCAGATCCTCCCACCAATTATTTTAGTGGATAGGTTCA-----------CACTGTTTATGCCAGACCCG
TCAGTTATTTTTGTATTATCTGTTTGGATTAGCGGGCTAAACGTCGCTGTATGTGATGTCACCGCTGGTCATGTTCCTTT
CCATGATGGACAGTTGGTAGTAGTTGTTAACTCTTCCTCTGTCCCTGTGCAAAGTCGGCACGTTGATCTTGATCGGCTGC
GCAGTTCTTTACTCTGCTTCGGG-CCTTCAGCAGCGACTTCTCTGGATAAATAAGCTCTATTATGTTGGTTCGGTGTCAG
TGTAGTGGTTACTGATTACGCAGTTGTGACATGATCCTATTTGGCCAAGCTGAGTTCTTTAGTCCTTGGCCCGATGCAAG
TTGTTTTGGTTTAAGTTTTGAATCTTCGGTGACAATAATGCATGGCTTCAGGCTAGGAAGGCGCTCCGCGCTCTCAGATC
ACTCGTCAAGCTGCAAGCTCTGGTCCGAGGCTACCTCGTGAGGAAGCAGGCGGCTACGACTCTGCACAGGTTGCAGGCGC
TCATGCGGCTGCAGGCCGATTCCCGCGCATTCAAGAGCGCCTCCTACCGGAAATCCATGGAGCAGGTCAGGCCC------
-------------CGAATTTGAACTCATCGTTCGTGTTGATCAACGATCACGAGTTCACGGATGTATATT--GAGTTTGA
TGTGCTTTCTGCGGCGTGTTTTTCGCAATGTAGGAGAGGATCGTTGCGCAAGATGCTCGGATGAGGACGCCGCCGGCCAA
GCCGGGGCACCGCCGGAGGCTGTCCGACAGCACAGACTCCAACTACGAGCGCAGCCCGCGGATTGTGGAGATGGACACGT
GCCACCTCCGCTCCCGGTCCAGCCGGATGGTGAGCAGCGGCCGGTACGCCACCGATCGCTCGTCCGGCCGCCTCGCCCCG
GACGTGGCCCTGCCGTTCTCGCCGCGGTCTGTGAAGCAGCCCCCGCGGCTGTGCACCCGGCGTGAGCCCGTCAGGCTCGC
CAAGACGGCGCAGAACACGCCCCGCTTCGGCGGGCCCGACGCGCCCTACACGTACGACTCGCCTGCCAAGAGCGTGGACG
GGCTGGCGGCGCGGCCGGCCTGGCACCGGGACCTGCTCGCGAGCCCGCGGTACATGGCGGGCACGGCCTCGTCGGCGGCG
AGGCTGCGGTGCCACAGCGCGCCCAGGCAGCCTGAGGATGCGCCGAGGGCGAGCCTGACCCAGCGGGATG------CTGG
GCCGAGGAAGTCGATGTGCACGCGGACGCAGCATGGCGGCCTCTGCTTCCACAGCTCGGATGCCACCCACACGCGCCGCT
CCGACCTCAGCGACGACGCGGCAAGAGATTATTACTTGGACAGGATGTGGTGATCGTCTGATCTATGAGATGGAGGCGGA
CGGACGGTGGTGTAAGA---TACCAGTTGTTGCAAATTGCTGGATAGTCTCCGAATTTTGTACATGCTTAGTTGTTAAAT
TTTCTT----TCTTGATGACATCTACGAGCTGCTAAAGTGTTACTACAACCACAATATTTTGGGACGGAGGGAGTATGTC
TTAGCTCGTAGTAACACTTTGGCATGTGCCAAAAACGTTTTTATATTTTTGGACTGAGGAAGTAATAAGTAGTGTGAAAG
TCTGAAAGTTTACGACATCAATGAAG------------------------------------------------------
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>chr3A_1_TraesCS3A01G275900
GACTCCGTATTAAATAGCGATAACACAAAACTTTGGCACATCTCGCACTTAAAAGCTGCACAGGAGAACTGATAGCGATG
ACCTGGTGCTACCTTTCCACGCCGCCTGAAGCTCCCGAGAGCACAAAAGAAGCTGACC----ACCCCGTATAAAACCGAG
AACGTCCATCCATGCGTTGCCGTGGTGTAAAGACGAGCTACATAGCACTCGTTATAGCCACGGAACAAATCGTGAGGGGC
GGGGCAAAGCGTTACTAACCGCGCTGACAGCCATGA---GTCCAGATCGAGCAGTAACGAAATTTAGGGTAGGGCTAGAG
CCGCTCTGCTCCATTCCGAGAAGGAATCCAGATCGAGTAGGAGTAAGTTTGGCCGCTTCGTCCGTGGTCCCAAGGTTGAA
CCCAGATCGAGCAGCGACGTTGACGGCGACTGTGGATCCCTCTCCCCGTTCTGCCCCGTTCTGTGCACGAAACAGTGGGA
ACGCACAAGCGAGATCCGCTACACCCCCGGCGTCCGTACCCACCTGGTGCTACGT--------------AGTACTACGTG
--------CTCCGTTGCCGCAATATTCTATCCACCCT------CGTCTCGTGGAGGGCATTCCTCCATGCGCTTCGTACT
GGG----GGCACACGGTATACAAGTCGCCGAACGAGGGTTGCCCGAGAGGGAAGTGCCCAGGGGCCAAGGCCGCCGCTGT
GTGGAGCAGAGCTTCCGAGAAACAGAAGCGGTTCGCGACGGTTGCTC---------------------------------
--AT---GTACGTACGTACGTACGTGAGTCCATGCTGCATGAGTGGCATGGTCCCGAGCCCCGACCGATCCGTTTTGGAG
GCGGTCGCGAGTGAATGATTGTGCATTGCCGTGTACTGCCAGGTTGCCTGATCAACGGCGGCTTGTTGTTGTTTCTATCT
ACTCGATCGTGCAGCAGCGGCGCATGTCGGTACTGCTAGCTCTCGTACGTACGTACGTACGTACATATGTGGACTTGAGT
TGGTCTTTTGGCCGGCGCATTTGTTGGCTTGCGCGCGCGCGCTCGGCGGTGGCGCTACCAGTCTCCTTCGCGATCCGGTG
GTGCCGAGACCCACGC-----GTCAGTTGTGCTCGCTCTCCCACCTATATCCCTCCCGCCTCTC------CCTCCCCGCC
CGCTGGAGTAGAAGT------AGTAGGAGTAATCCGCTCGCCGCCGCTGCGGTTATCCGTTCGAGGTTGATGCGCTGCAA
AGTTTCCTCTTCCGGGCTGGCTG----GCTGGCTGGGCTGGAGTGACTCACGTAAACTTCGCCGCTCCGCTCCGGCCACC
GGCCTTTCCATCTTTTGCCGCTGCTCCCTTACCTGCCCCGCAACCGCGGGTTGATTGCCTGCTTTAATCTCGTGCCTTTC
CTCTCTCTCATTTTCCAG-----------------TCGGCCCCGTTCATTTCTCCTGGATTTCGCGTACAAATCGCCCTT
CCCTTTTCCATTCCAATTAATACTGCACGAGCCGTGATGTCGCGTACGGAGTCGACAAGCTGTATATAAGCCATCGCTGT
GTTTCTTCCGTCCTT----CCTCTAGGTTTCTCCTCCCATAGCTTCCTGTCCCCAAAAGCTCCTTTTCTCTCGACTCAAC
TCAACTCGGAGGAGCCTCTGCGCCAGTGCGCCGCGCCCTCGGGCATAGTGGGCTAAGTAGTGCCTTCTCCTTCTGAGATT
CTTCATCTTACTGACGCTTCGTTGCGCTGA---------------------------CGCTTGTTCGTGTCCGCAGAGAT
GGGGCGTGCCATGCGGTGGCTCAAGAGGCTGCTCACGGGCAGGAAGGAGGCGCACGGAGGCGGCAAGGAGATCCATGCCG
CGACCGACTGGCATGACG---CGGCGGTGAAGGAGTCCACCAAGAGATGGAGCTTCGTGAAGCAGAGGAAGAGCGGGGTT
GACGCCGGGAAGCGGCCCTCAGAGCCTCTCGCCGCCGCGCTGGAGGTGAAGCCATGCCGCTGTGCCGGCGGCGAGCAGGC
GGGAGCACGCGAGGAGAAGGCGGCCGTCGTGATTCAGAAAGCCTTCAGAGGCTACCTGGTATGCTCTTGATCATCATCCC
GTTGATTC-------ATATCTCCATCGTACGTCATCTCTGTATAAGTTGGTTGGGATACTGCTGACCGCGTGCGTGTCCG
AGCTTCGGTTATGTTCATCATTTCTTGCTATCCGGTGTGCTGAAATGGCTTGAACAGTCCCGGTGTGCGCCCGAATTCTG
ACGTTAACGATGCAGATCCTCCCACCAATTATTTTAGTGGATAGGTTCA-----------CACTGTTTATGCCAGACCCG
TCAGTTATTTTTGTATTATCTGTTTGGATTAGCGGGCTAAACGTCGCTGTATGTGATGTCACCGCTGGTCATGTTCCTTT
CCATGATGGACAGTTGGTAGTAGTTGTTAACTCTTCCTCTGTCCCTGTGCAAAGTCGGCACGTTGATCTTGATCGGCTGC
GCAGTTCTTTACTCTGCTTCGGG-CCTTCAGCAGCGACTTCTCTGGATAAATAAGCTCTATTATGTTGGTTCGGTGTCAG
TGTAGTGGTTACTGATTACGCAGTTGTGACATGATCCTATTTGGCCAAGCTGAGTTCTTTAGTCCTTGGCCCGATGCAAG
TTGTTTTGGTTTAAGTTTTGAATCTTCGGTGACAATAATGCATGGCTTCAGGCTAGGAAGGCGCTCCGCGCTCTCAGATC
ACTCGTCAAGCTGCAAGCTCTGGTCCGAGGCTACCTCGTGAGGAAGCAGGCGGCTACGACTCTGCACAGGTTGCAGGCGC
TCATGCGGCTGCAGGCCGATTCCCGCGCATTCAAGAGCGCCTCCTACCGGAAATCCATGGAGCAGGTCAGGCCC------
-------------CGAATTTGAACTCATCGTTCGTGTTGATCAACGATCACGAGTTCACGGATGTATATT--GAGTTTGA
TGTGCTTTCTGCGGCGTGTTTTTCGCAATGTAGGAGAGGATCGTTGCGCAAGATGCTCGGATGAGGACGCCGCCGGCCAA
GCCGGGGCACCGCCGGAGGCTGTCCGACAGCACAGACTCCAACTACGAGCGCAGCCCGCGGATTGTGGAGATGGACACGT
GCCACCTCCGCTCCCGGTCCAGCCGGATGGTGAGCAGCGGCCGGTACGCCACCGATCGCTCGTCCGGCCGCCTCGCCCCG
GACGTGGCCCTGCCGTTCTCGCCGCGGTCTGTGAAGCAGCCCCCGCGGCTGTGCACCCGGCGTGAGCCCGTCAGGCTCGC
CAAGACGGCGCAGAACACGCCCCGCTTCGGCGGGCCCGACGCGCCCTACACGTACGACTCGCCTGCCAAGAGCGTGGACG
GGCTGGCGGCGCGGCCGGCCTGGCACCGGGACCTGCTCGCGAGCCCGCGGTACATGGCGGGCACGGCCTCGTCGGCGGCG
AGGCTGCGGTGCCACAGCGCGCCCAGGCAGCCTGAGGATGCGCCGAGGGCGAGCCTGACCCAGCGGGATG------CTGG
GCCGAGGAAGTCGATGTGCACGCGGACGCAGCATGGCGGCCTCTGCTTCCACAGCTCGGATGCCACCCACACGCGCCGCT
CCGACCTCAGCGACGACGCGGCAAGAGATTATTACTTGGACAGGATGTGGTGATCGTCTGATCTATGAGATGGAGGCGGA
CGGACGGTGGTGTAAGA---TACCAGTTGTTGCAAATTGCTGGATAGTCTCCGAATTTTGTACATGCTTAGTTGTTAAAT
TTTCTT----TCTTGATGACATCTACGAGCTGCTAAAGTGTTACTACAACCACAATATTTTGGGACGGAGGGAGTATGTC
TTAGCTCGTAGTAACACTTTGGCATGTGCCAAAAACGTTTTTATATTTTTGGACTGAGGAAGTAATAAGTAGTGTGAAAG
TCTGAAAGTTTACGACATCAATGAAGCATCTACAACCACAATTTCCTATATACTGCTTGTATGCCCACGGGCGCGGCAGT
GTCCAAACAGAAGCCATTTTAAACCCTCCATAGCCATAAACCCAAACAGAAGCCGTTTTGAACCCTCCATAACCATAAAC
CTGAGAAGTTGAAACCATATTTCATACAAACCCATACATACTACGTAGATCATATGGGATAGCATAAAAACACCGCAATT
CGGACGTCGGTCAGCAACATAGTTCCTCCAAAAGGACCGACGGAGTTCAAAATTCAGCCTAAATAGAAGATAATAAAACA
ACTAAAATATAAACATAGTATTGGAGCAAACGGAGTTCACCACTTCCTTGCCGGCCGCTTCCCCTTGGGGTCTTGGTGGC
TGTCCTCGATGTATGCATCCGCGGCGGGGTGCGAATCGCCGTCCGTCGTGTCGATGTCATCGTCGGAGGAGGACGAGGAC
GAGATGAGGAATCCTGTCATGCGGCGGGCTTTGCGGTTCTGCTCCATCGCTAGCCGGGAGGCTATCTCCGCTGACACCTC
CTTCTGTCACGCCAACTTCGTCGATTACTTGAGCGTCTTGTGGAGAGTAGACGTGTTCTTGCGACGTTGACGACGGGCAT
CCGTTTCAGCAGAGGTGTATGACCGTCAGATTGCGAGGGGAGCTGCATCATCATCCTTGGCGGGTGGAAGCGACTCCGAC
ACAGATCTGGACGACACGCAACCGCGCCTCGCTACGCCATGCGCTGCCGCCTCATCGCCTAGCAGTAGGCGCGGCCCGCC
GTCTCTGGCTGCTTCTGCCGTGCTAGCGGGCTGGGGTTGTGGGCAACAACACCCAACAGCTCCCAGTAGGGGCGGATGTT
GGCGGTGCCGAGCGTCGTTGCTCGTGTTGTTACCTCGCCGTGGATGGCAGAGAGCGCGTAGGGCCGCTGCGGTGGACGAG
CTGCTCACCCACGATCTCGGGGACGCCGTCGAGGAGGAGCCCCCGCCTCGATCCATCTGCGAGCGC
>chr3D_9
ATTAAATATA--------GATAACACAAAACTTTGGCAAATCTCGCACTTAAAAGCTGCACAGGAGAACTGATAGCGATG
ACCTGGTGCTATCTTTCCACGCCGCCTGAAGCTCCCGGGAGCACAAAAGAAGCTGAATACGTACCCCGTAGAAAACCGAG
AACGTCCAT----GCGTTGTCGTGGTGTCAAGACGAGCTACATAGCACACGTTAGAGCCACGAATTAAATCGTGAGGTGC
AGGGCAAAGCGTCACTAACCGCACTGACAGCCATGAGTTGTCCAGATCGAGTAGTAACGAAATTTAAGGTAGGGCTAGCG
CCGCTCTGCTCCATTCGGAGAAGGAATCCAGATCGAGTAGGAGTAAGTTTGGCCGCTTCGTCCGTGGTCCCAAGGTTGAA
CCCAGATCGAGCAGCGACGTTGACGGCAACTGTGGATCCCTCTCCCCGTTCTGCCCG----------CGAAACAGTGAAA
ACGCACAAGCGAGATCCGCCACACCCCCGGTGTCCGTGCCTGCCTGGTGCTACTGCTACGTACTACTCCAGTACTACGTA
CTCCGTTTCTCCGGAACTGCAATATTTTATCCACCCTCA------TCTCGTGGAGGGCATCCCTCCATGCGCTTCGTACC
GGGCTGGGGTGCACGGTATACAAGTCGCCGAACAAGGGTTGCCCGAGAGGGAGGTGC-----------------------
--------------CCAAGAAACAGAAGCGGCCGGCGTGGGTCTCTCGGTGCAGCATCGGCGCGAACGATCCCCACCGTT
TCATGTAGTACGTAACTAC--------GTCCATGCTGCATGAGTGGCATGGTCCCGAATCCCGACCGATCCGTTTTGGAG
GCGGTCGCGAGTGAATGATTGTGCATTGCCGTGTACTGCCAGGTTGCCTGATCAACGGCGGCTTTGTTGTTGT----TCT
ACTCGAT----------CGGCGCATGTCGGTACTGCTA-----------------CGTACGTACATATGTGGACTTGAGT
TGGTCCTTTGGCCTGCGCATTTGTTGGCTTGCGCGCGCGCGCTCGGCGGTGGCGCTACCAGTCTGCTTGGTGATCTGGTG
GTGCCGAGACCCACGC-----GTCAGTTGGGCTCGCTCTCCCACCTATCCCTCTC---CCTCTC------CCTCCCCGCC
CGCTAGACTAGTAGAAGTAGCAGTAGGAGTAATCCGCTCGCCGCCGCTGCGGTTATCCGTTCGAGGTTGATGCGCTGCAA
AGTTTCCTCTTCCGGGCTGGCTGGCTGGCTGGCTGGACTGGAGTGACTCACGTAAACTTCGCCGCTCCGCTCCGGCCACC
GGCCTTTCCATCTTTTGCCGCTGCTCCCTTACCTGCCCCGCAACCGCAGGTTGATTTCCTCCTTTAATCCCGTGCCTTTC
CTCTCAAAGCAAAGAGTGGACTTGGAGTTTTTCCTCCGGCCCCGTTCATTTCTCCTGGATTTCGCGTACAAATCGCCCTT
CCCTTTTCCATTCTAATTAATACTCCACGAGCCGTGATGTCGCGTACGGAGTCGACAAGCTGTATATAAGCCCTCGCCGT
GTTTCTTCCTTCCTTCCTTCCTCTAGGTTTCTCCTTCCATAGCTTCCTGTCCCCAAAAGCTCCTTTTCTCCCAACTCAAC
TCAAGTCGGAGGAGCCTCTGCGCCAGTGCGCCGCGCCCTCGGGCATACTGGGCTAAGTACTGCCCTCTCCTTCTGAGATT
CTTCATCTTACTCACGTTTGGTTCCGTTAACGACTTGATGCTCTAGCTTCTTCCTTGCGCTCGTTCATGTCTGCAGAGAT
GGGGCGTGCCATGCGGTGGCTCAAGAGGCTGCTCACAGGCAGGAAGGAGGCGCACGGTGGCGGCAAGGAGATCCATGCCG
CGACCGACTGGCATGACGCGGCGGCGGTGAAGGAGTCCACCAAGAGATGGAGCTTCGTGAAGCAGAGGAAGAGCGGGGTT
GACGCCGGGAAGCGGCCCTCAGAGCCTCTCGCCCCCGCGCGGGAGGTGAAGCCATGCCGCTGTGCCGGCGGCGAGCTGGT
GGGAGCACGCGAGGAGAAGGCGGCCGTCGTGATTCAGAAAGCCTTCAGAGGCTACCTGGTATGTTCTTGATCATCATCCC
GTTGATTCATATCTGATATCTCCATCGTACGTCATCCCTGTATAAGTTGGTTGAGATACTGCTGACCGCGTGCGTGTCTG
AGTTTCGGCTATGTTCATCATTTCTTGTTATCCGGCGTGCCGAAATGGATTGAACAGTCCCAGTGTGCGCCCGAACTCTG
ACGTTAACGATGCAGATCCTCCCATCAATTATTTTAGTGGATAGGTTCACACTGTTCGCACACTGTTTATTCCAGACCCG
TCAGCTCGTTTTGTATTATCTGTTTGGATTAGTGGGCTAAACGTCGCTGTATGTGATGTCACTGCTCGTCATGTTCCTTT
CCATGATGGACAGTTG---GTAGTTGTTAACTCTTCCTCTGTCCCTGCGCAAAACCTGCACGTTGATCTTGATCGGCTGC
GCAGTTCTTTACTCTGCTTCGGG-CCTTCAGCAGCGACTTCTCTGTATAATAAGCTC----TGTGTTGGTTCGGTGTCAG
TGTAGTGGTTACTGATTACGCAG-TGTGACATGAGCCTCTTTGGCCAAGCTGAGTTCTTTAGTCCTTGGCCCAAAGCAAG
TTGTTTTGGTTTGAGTTTTGAATCTTCTCTGACAATAATGCATGGCTTCAGGCTAGGAAGGCGCTTCGCGCTCTCAGATC
ACTCGTCAAGCTGCAAGCTCTGGTCCGAGGCTATCTCGTGAGGAAGCAGGCGGCCACGACGCTGCACCGGCTGCAGGCGC
TCATGCGGCTGCAGGCCGATTCCCGCGCTTTCAAGAGTGCCTCCTACCGGAAATCCATGGAACAGGTCA-GCCC------
-------------CGAATTTGAACTCTTCGTTCGTGTTGATCAACGATCACGACGCGTCGACGTGATTTCAAGAGTTTGA
TATGTTCGCTGCTGTGCATTTTCCGCAATGCAGGAGAGAATTGTCGCGCAAGATGCCCGGATGAGGACGCCGCCGGCCAA
GCCGGGGCACCGGCGGAGGCTGTCCGACAGCACGGACTCCAACTACGAGCGCAGCCCGCGGATCGTGGAGATGGACACGT
GCCACCTCCGCTCCCGGTCCAGCCGGATCGCG---AGCGGCCGGTACGCCGCCGATCGCTCGTCGGGCCGGCTCGCCCCG
GACCTGGCCCCGCCGTTCTCGCCGCGGTCCGTCAAGCAGCCCCCGCGGCTGTCCACCCGGCGTGAGCCCGTAAGGCTCGC
CAAGACGGCGCAGAACACGCCCCGCTTCAGCGGGGCCGACCCGCCGTACACGTACGACTCGCCTGCCAAGAGCGTGGACG
GGCTGGCGGCGCGGCCGCTCTGGCACCGGGACCTCCTCGCGAGCCCCCGGTACATGGCGGGCACGGCCTCGTCGGCGGCG
AGGCTGCGGTGCCAGAGTGTGCCCAGGCAGCCGGCGGAGGCGCCGAGGGCGAGCCTGACCCAGCGGGATGTCCCTGCTGG
GGCGAGGAAGTCGACGTGCACGCGGACGCAGCATGGCGGCCTCTGCTTCCACTCCTCGGATGCCACCCACACGCGCCGCT
CCGACCTCAGCGACGACGCGGCAAGAGATTATTACTTGGACAGGATGTGGTGATCGTCTCATCTATCAGATGGAGACGGA
CGGACGGTGGTGTATGA---TACCAGTAGCTGCAAATCGCTGGATAGTCTCCGAATTCTGTACATGCTT-----------
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>chr3B_251
--------------------------------------------------------------------------------
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--------------CTAACCGCACTGACAGCCATGA---GTCCAGATCGAGTAGTAACGAAATTTAAGGTAGGGCTAGCG
CCGCTCTGCTCCATTCCGAGAAGGAATCCAGATCGAGTAGGAGTAAGTTTGGCCGCTTCATCCGTGGTCCCAAGGTTGAA
CCCAGATCGAGCAGCGACGTTGACGGCAACTGTGGATCCCTCTCCCCGTTCTGCTCG----------CGAAACAGTGGAA
ACGCACAAGCGAGATCCGCCACACCCC-----------------------------TACGTACTACGTACTC------TA
CTCCGTTTCTCCGGAACCGCAATATTTTATCCACCCTCGTCTGCGTCTCGTGGAGGGCATTCCTCCATGCGCTTCGTACT
GGGCTGGGGCACACGGTATACAAGTCGCCGAACAAGGGTTGCCCGAGAGGGAGGTGC-----------------------
--------------CCAAGAAACAGAAGCGGCCGGCGTGGGTCTCTCGGTGCAGCATCGGCGTGATCGATCCCCACCGTT
TCAT---GTACGTACCTAC--------GTCCATGCTGCATGAGTGGCATGGTCCCGAATCCCGACCGATCCGTTTTGGAG
GCGGTCGCGAGTGAATGATTGTGCATTGCCGTGTACTGCCAGGTTGCCTGATCAACGGCGGCTTTGTTGTTGT----TCT
ACTCGATCGTGCAGCAGCGGCGCATGTCGGTACTGCTA-----------------CGTAC----ATATGTGGACTTGAGT
TGGTCTTTTGGCCTGCGCATTTGTTGGCTTGCGCGCGCGCGCTCGGCGGTGGCGCTACCAGTCTGCTTCCTGATCTGGTG
GTGCCGAGACCCACGCCACGCGTCAGTTGGGCTCGCTCTCCCACCTATCCCTCTC---CCTCTCCCTCCCCCTCCCCGCC
CGCTAGACTAGTAC---------TAGGAGTAATCCGCTCGCCGCCGCTGCGGTTATCCGTTCGAGGTTGATGCGCTGCAA
AGTTTCCTCTTCCGGGCTGGCTG----GCTGGCTGGACTGGAGTGACTCACGTAAACTTCGCCGCTCCGCTCCGGCCACC
GGCCTTTCCATCTTTTGCCGCTGCTCCCTTACCTGCCCCGCAACCGCATGTTGATTTCCTCCTTTAATCTCGTGCCTTTC
CTCTCAAAGCAAAGAGTGGACTTGGAGTTTTTCCTTCGGCCCCGTTCATTTCTCCTGGATTTCGCGTACAAATCGCCCTT
CCCTTTTCCATTCTAATTAATACTCCGCGAGCCGTGATGTCGCGTACGGAGTCGACAAGCTGTATATAAGCCCTCGCTGT
GTTTCTTCCTTCCT--------CTAGGTTTCTCCTTCCATAGCTTCATGTCCCCAAAAGCTCCTTTTCTCTCAACTCCAC
TCAAGTCGGAGGAGCCTCTGCGCCAGTGCGCCGCGCCCTCGGGCATACTGGGCTAAGTACTGCCCTCTCCATTTGAGATT
CTTCATCTTACCGAGGTTTGCGTTGACGCG------------CTAGCTTCTTCCTCGCGTTCGTTCGTGTCCGCAGAGAT
GGGCCGTGCCATGCGGTGGCTCAAGAGGCTGCTCACAGGCAGGAAGGAGGCGCACGGTGGCGGCAAGGAGATCCATGCCG
CGACCGACTGGCATGACGCGGCGGCGGTGAAGGAGTCCACCAAGAGATGGAGCTTCGTGAAGCAGAGGAAGAGCGGAGTT
GACGCTGGGAAGCGGCCCTCAGAGCCTCTCGCCGCCGCGCTGGAGGTGAAGCCATGCCGCTGTGCTGGCGGCGAGCAGGT
GGGGGCACGCGAGGAGAAGGCGGCCGTCGTGATTCAGAAAGCCTTCAGAGGCTACCTGGTATGTTCTTGATCAGCGTCCC
ATTGATTC-------ATATCTCCATCGTACGTCATCTCTGTATAAGTTGGTTGAGATACTGCTGATCGCGTGCGTGTCTG
AGTTTCGGCTATGTTCATCATTTCTTGTTATTCGGCGCGCTGAAATGGCTTGAACAGTCCCGGTGTGCGCCCGAATTCTG
ACGTTAACGATGCAGATCCTCCCATCAATTATTTTAGTGGATAGGTTCACACTGTCCGCACACTGTTTATTCCAGACCCG
TCAGCTCGTTTTGTATTATCTGTTTGGACTAGTGGGCTAAACGTCGCTGTATGTGATGTCACTGCTGGTCATGTTCCTTT
CCATTACGGACAGTTGT---TAGTTGTTAACTCTTCCTCTGTTCCTGTGCAAAGTCGGCACGTTGATCTTGATCGGCTGC
GCAGTTCTTTACTCTGCTTCGGGCCCTTCAGCAGCGACTTCTCTGTATAATAAGCCC----TATGTTGGTTCGTTGTCAG
TGTAGTGGTTACTGATTACGCAG-TGTGACATGAGCCTATTTGGCTAAGCTGAGTTGTTTAGTCCTTGGCCCAATGCAAG
TTGTTTTGGTTTAAGTTTTGAATCTTCTGTGACAATAATGCATGGCTTCAGGCTAGGAAGGCGCTTCGCGCCCTCAGATC
ACTCGTCAAGCTGCAGGCTCTGGTCCGAGGCTACCTCGTGAGGAAGCAGGCGGCCACGACGCTGCACCGGCTGCAGGCGC
TCATGCGGCTGCAGGCCGATTCCCGCGCCTTCAAGAGTGCCTCCTACCGGAAATCCATGGAACAGGTCAGGCATTTTCAC
TTACACCATGCCTCGAACTTGAACTCGTCGTTCGTGTTGACCAACGATCACGTGTCGACCGATAAATTTT--GAGTTTGA
TATGCTCGCTGCGGTGCATTTTTCGCAATGCAGGAGAGAATTGTCGCGCAAGATGCCCGGATGAGGACGCCGCCGACCAA
GCCCGGGCACCGGCGGAGGCTGTCCGACAGCACGGACTCCAACTACGAGCGCAGCCCGCGGATCGTGGAGATGGACACGT
GCCACCTCCGCTCCCGGTCCAGCCGGATGGTGAGCAGCGGCCGGTACGCCACCGATCGCTCGTCGGGTCGCCTGGCCCCG
GACCTGGCCCCGCTGTTCTCGCCGCGGTCCGTCAAGCAGCCCCCGAGGCTGTCCATCCGGCGTGAGCCCGTCAGGCACGC
CAAGACGGCGCAGAATACGCCCCGCTTCAGCGGGGCCGACCCGCCGTACACATACGACTCGCCTGCCAAGAGCGTGGACG
GGCTGGCGGCGCGGCCGCTCTGGCACCGGGACCTGCTCTCGAGCCCGCGGTACATGGCGGGCACGGCCTCGTCGGCGGCG
AGGCTGCGGTGCCAGAGCGCGCCCAGGCAGCCGGCCGAGGCGCCGAGGGCGAGCCTGACCCAGCGAGATGTCCCTGCTGG
GCCGAGGAAGTCGACGTGCACGCGGACGCAGCATGGCGGCCTCTGCTTCCACTCCTCGGATGCCGCCCACACGCGCCGCT
CCGACCTCAGCAACGACGCGGCAAGAGATTATTACTTGGACAGGATGTGGTGATCGATCGGACGGA--------------
--GACGGTGGTGTATGATACTACCAGTAGCTGCAAATTGCTGGATAGTCTCCGAGTTTTGTACATGCGTAGTTGCTAAAT
TTTCTTGCTTTCTTGATGACATCTAGTAGGTTCTAAAGTGCTACCACTAC------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSS--------------------S-----------------------------------------
-----------S-------------------------S------------------SS------------S---------
---------SSSS------S--------S-------------------S-----S-------S-SS-----------S--
S-----------S---------S----------------------------S--------------S-----------S-
--------------------------------------------------------------------------------
---------------------------S----------------------------SSSSSSSSSSS-----------S-
-------------------S----------S------S--SS-----------SS------------------------S
-------------SSS----------S-----------------------------------------------------
---------------------------------S------------------S----SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS--S--------------SSS---SS---SS------------------------------------
---------------S---SSSSSSSS------------------------------SS---------------------
----------------------------------------------------------------SS-SS-SS-SSSS---
--------------------------------------SSSSSSSSSSSSSSSSS-------------------------
-------------S--------------------------------------------------S-----S----S----
-----------------------------S------------------SS-S---SSS----------------------
----S--S---S--S-----------------------------------------------------------------
------------------------------------S-------------------------------------------
-----------------------------------------------S--------S---S-------------------
-----SSSSSSSSSSSS---------------------------------------------------------------
-------------S----------S-----------------------------------------------S-------
---------S-------------------------S------------------------------------S-------
----S------------------------------------------S-----------S----S---------------
----------------S--S---S----S--------------------------------S------------------
------------------------------------S--------------------S----------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
---------------------------------------------------------------S----------------
-----------------------------------------------------S------------------------S-
--S-----S------------------S-------S--------------------------------------------
------------------------S---------------------------------------------S---------
----S-SS------------------------S-----------------------------S-----------------
----------------SSS-------------------------------------------------------------
---------------------------------------------S----SS-SS-SSSSS-------------------
-----------------------S----------S-------------------------------------S-------
---------------------------S-------------------------------------S--------------
------------------------------------------------------S-----S------S--S---------
----------------------------S--------S-----------------------S------------------
--------------------------S----------------------------SS------SS--S------------
-S----SS------S-SS------------S-------S--S--S-----------S-----------------------
------------S--------------------S-----------------------------S----------------
----------------------------------------------------------------S---------------
---S------S------------------S--S-------------------S---------------------------
----------------------------S-----S-----S----S----------------------------------
-----------------SS-------------------------------------------------------------
--------------S-----------------S-S---S-----------------------------------------
--------------S-------------------------------------SS--------------------------
------------------------------------------------------------------S--------S----
--------------S------------S-S--------------------------------------------S-----
-------------------------SS--S-S--------S---S--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_956
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--------------------------------------------------------GGCGGCTTGTTGTTGTTTCT----
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------------------------------------------------------------------
>reverse_2909
--------------------------------------------------------------------------------
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----------------------------ATTCAAGAGCGCCTCCTACC--------------------------------
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>forward_2606
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--------------------------TTCAGCAGCGACTTCTCTGG----------------------------------
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>reverse_4538
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---------------------------------------------------------GAGGCTATCTCCGCTGACAC---
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------------------------------------------------------------------
