>input_sequence_27354
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-------------------------------------------------------------ATGGCGGAGTACGACGAGC
AGGGCATGGCCATCGCGGCCGCCGAGATACTTCTCAGCCTCCGGAGCAGGACGCTGGCGCGGTGGCCGGACTGGGTTCCG
CGCCCGTCCGGCGACCTCGCCCCGGCGGCGGCGGATCTCCAGCGGCCGGAGGAGGCGGAGGACGAGCTGCCGCCGATTCC
GGAGGGGTGGCCGAAGCGGCCGCGGTTGCCGCCCCGTGCGGTGGCGAAAGGAACCGCGTGGCTGCTGTCGTGGGAGAGTC
CCTTTGCGCGGCTGGGGCAGCCTGTTGTCGCCAGATCCGGCGCGTGCTCCAGCGGGGAGGAGAGGGCGCGGTCGCACCCG
CGCGTCACGAAGGTGAAGCGCGAACCTTTGGCGGCGCGGAGGCCGGAGACGCCGCCGTACTACGTCTCGGCCGCCGGATC
CGGCCCTTCCACGAGCGGCATGGA--------------------------------------------------------
-------------------------CCGGGCGCGGTCGCGGCGGCGGCCGCGCGTGAGCGAGAAGGCGCAGGCGGCGGCG
GCCGCGTGGACGGACGGCCCCATGGCGGCATCGAGCCCGGAGACGCCCTTCGACTACGCCAACGCCGCTGGATCAGGGGC
GTCCTCGAGCGGGGACGAGGTGGCGCGGTCGACGGCCAAGCGCAAGGCGCAGGGGTCGGGCGGATCCGGAGTGCCTTCCA
GCGGCGACGAGGGGTGCAGCTCGCCGGCGAAGCGCGCGCGGGCGGACGTCTCCATCGCCGTCGCCGGCGCCGGCGCCGTG
CAACCCGCGGTTAAACTTGAGGTGAGTTTTTTTTCAATCGCCTTATCGCTTTCTCATTCTTTGCGGTTTATTCGTCTCGC
TTTTGGACTCTGGAGGCCTTTCTTGCACGCCAATCTTGTTGAAGTCGCGTGAATTGCAGCTGTATT-CCCCCCTCGGTTC
TGCGAGACTCTGTCTCGTTACTCATCAATCTGTCGAGGAAGTTCCTTTGCCGTTATCTTTTTTTGGCCGTCCCATCGTTG
ATGTGTTCATACGGGTTGCGTGGTGTTCTTCGTTTGAATCTCGGGGGCTATTGTGATTCTAACCGGACAGTATGAGCTGG
GTAGGGGATGGAGTTCTTGTGTTCCGG----------------CGCCGGAGAGGATAAATCATTCATTCTCTGGCAACGG
ACTCCGGCCCCCGGGGTCGTTTTCGTGAGCGTATGGCTTTTGTGTGGACCCT-TGCCTTGGCCGTTGGCACCGTGTCTAG
TGTAGCTGGAGGTGGCCGATGGGCGACGAGGCAGGGTAGATAGATGGAGTAGTTGTGTTATACGCCGCATTTATCGCTTT
TATTTA----TTCCTCGCTCCATCCAATCCAGTCAGCAATAGGGC-------------------------------GAGA
AAAAAGGAAGCAGCAAGCGTGAAATCTTGAGTAATTTCTTTTTTTTTAAGTGTTCAAATCTTGAGTGATTTCGTAAAGTC
GATTGTTGCGGGGTTTTGAATTGGAAGGCGAATTGATTAATTATGGGAGTACCTAGAACTTATCTAGATGAGATATAATT
TGGTCTCATTTACCTGAAAAACAAGAACAGATACAACCCACATTAGCACACACATCTTATAGCATCATATCCAATGGCTA
TAAAAGGTGAATGAGACCAAATTATGTCTTATATAGATGAGTTCTAGCAAAACTGAGTAATTATTGTGTGTGTCGTTAGC
TGCGGATTTGGAATTACTCAAT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TAGTACATGTTGTGTGTGTGTGTG
TTTTCGCTGTGGACGAATGAATCCCCATCGCCATCATGTGATGGCTTCGCTCCTTCCTCTGCGCGTGGTCCCGCGTGTCA
TCTTGGGCCGCCTGTTTCCCGCACTCTCCGCGCGTGTTTCTCACCCTGGAGGGGT-AAATTTCGTTTCCTTCTGACTTGC
CTTGCAAGATTGGGACGCGGATCCTCTGCCGTGCCGCAGGGTGCCGTTCGGCGATGGTGGGCTCGCTGTGAATCAGCCGC
ACATGCTAGTGTCCCCAACGGCGTGTAACGTACGTCAGGAGAGCTGCTTCCGCAAGATTGTAGACTTCCTTCGGGGTTCC
GGCGCTGTTTCCCGTGGGT-----------------------------CC-------------------GGCCCCACGGA
GTTCCATGGCTAGTTTGACACC--GCATGTCATCGGGCTTTTCCTTTTTTGTCGTCGTTTAT------------------
---------------------------------------CTTCAGTGGAAATTAACGCGAAGATTGGAAGCTGGGTGAAG
CTTTTTTAAATAGGGAAACATAAACTTTTTCCTGGCTCTGCTTGCGGCAGGGTTGTTGTAAAGTGGTGCGTGTGCCTTT-
ACGTGTCAGTCCGGGATGCGGGTCCCTTTGGCGACCGACGTGCACAGGGGTGGGGTGGGGTGCAGCCCATCGGTCGCCAA
CGTGGTCATTGGATGCCGCAGTGACCACTCCCTGGTCCAGCATGGGCTCGTGAGTCGCGACTGGTGTGGTATCATGTCAC
CGCACCAGGCCCGCCAGGGCTGCGACTTCTTTCCTAAAAAAACGAAGTCCAACTCTACTACAGTAACT------------
--------------------------------------------------------------------------------
---TTCTTCTCAAAG----AAAT---------------------------------------------------------
----------------TACTACTCGTATAAGTGTGCTGGCTTATTTGTTGCT------AGTAGCAGCTGTCTCGATGCCT
TTGCATTGCATCTATGCGAGTACGGAGTAGTACAACTATTTTATTCCGCGATGATTT-CTTAACAGTGATTCCACGTGAT
TCCCTCGGATCTCGCATCTTGCCGAGATCCGTCTGGTTGTTGTCATCCTGTATTTGATTA---AGCAGTGTTCTTTCATA
TCTTTCTCGATTCTCCTGGAGCTTCCAACTAAAATCATTTTGGTTGATGTTGTGCAGGATCAAAAGACCGAGAACAATTA
CCGGGACGAGAAGGGCCACTTGCTGTTTGACCTCAACGAAGATCCAAGCATGGCGGAGGAGTGGTGA-------------
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-----------------------------------------------------------------------
>chr7A_1_TraesCS7A01G255000
AACTTACTCTATTCTATGTTTGTGCCTATCC-GGCTATAGTCATCCAACATGCTGCCTCCATCCATTGCGGCACCTCGCT
CTCAAACACAACAACATCCAGATAATCTCCATCGAGGCATAATTCCTTCATCATTGCTTGTAGATCACTTTGGTCCATCG
TCGCAACCTTCAATGTCTC--AACTGCCATGAAACCCTAGCCCAAGAGTATCTATCGGGATAAAAATACTAACACCCGAT
CACCACGAGAACCCTAACCAAGGTCGGGCGACGATGCACAATCGCCCCTTGTCCCGCCCGAGCGAAGAACAAGCAAGAGA
GGGCGGGGAAGGGAAGGGAAAACTCAACACGAGTGGAGGCGA--------CGAGAT--------GGCAGAAACCCTAGCG
GGGAGGGAATTAACATTCTCTTATAAGTTTGGGCAGCCCTC-AAAAAAAAA-GTTTGAGCAGTTTACGGATGGATACATG
AGAGCGAGATGCATCCACATCCGGATCCGGCCTGCCCTAATAAACTCGGATGCCTTTTCGCTCGGACCCACCTTGCTGCC
ATTAAAAAAAAGCAGGGCACTATACAACGCAGAGTACGAACACACATTCCTCCGCTCCCCACCAATCGAGTCGCGAGACA
GTTCCCTTACATAGAACTACTCCGACGGGACGGACCCACGTAACAGGGAGACGATTTCCCGAACTCAAAGCTCATGCAGT
TTACCGACTCGCCCGGCCTCGACTTGACCCACCCGCAAGCTAATTGCAGGGGGCCCAGGGGCCGGTGAGACGGGTCCAGA
AACACCGGGTCTAGGGCTCTAGGCGGCGGCCACTGCTGTCCGTCTCCTCCTCCTCGCCCAACTCGCGTCCGCCTCCGTCT
CCGCATCCACTTATAAAAGCCACCCGCCCTCCCGTCGCCTCCCTCTTTTCCTGTATTTCTGCCAGAGAAAAGAAAGAAAT
CACACCTCCCATCCATCTCAGGGCGGCGGCGTGCGCGAGTTCGTCTCCTGCGGCTCTCCCCATGGCGGAGTACGACGAGC
AGGGCATGGCCATCGCGGCCGCCGAGATACTTCTCAGCCTCCGGAGCAGGACGCTGGCGCGGTGGCCGGACTGGGTTCCG
CGCCCGTCCGGCGACCTCGCCCCGGCGGCGGCGGATCTCCAGCGGCCGGAGGAGGCGGAGGACGAGCTGCCGCCGATTCC
GGAGGGGTGGCCGAAGCGGCCGCGGTTGCCGCCCCGTGCGGTGGCGAAAGGAACCGCGTGGCTGCTGTCGTGGGAGAGTC
CCTTTGCGCGGCTGGGGCAGCCTGTTGTCGCCAGATCCGGCGCGTGCTCCAGCGGGGAGGAGAGGGCGCGGTCGCACCCG
CGCGTCACGAAGGTGAAGCGCGAACCTTTGGCGGCGCGGAGGCCGGAGACGCCGCCGTACTACGTCTCGGCCGCCGGATC
CGGCCCTTCCACGAGCGGCATGGA--------------------------------------------------------
-------------------------CCGGGCGCGGTCGCGGCGGCGGCCGCGCGTGAGCGAGAAGGCGCAGGCGGCGGCG
GCCGCGTGGACGGACGGCCCCATGGCGGCATCGAGCCCGGAGACGCCCTTCGACTACGCCAACGCCGCTGGATCAGGGGC
GTCCTCGAGCGGGGACGAGGTGGCGCGGTCGACGGCCAAGCGCAAGGCGCAGGGGTCGGGCGGATCCGGAGTGCCTTCCA
GCGGCGACGAGGGGTGCAGCTCGCCGGCGAAGCGCGCGCGGGCGGACGTCTCCATCGCCGTCGCCGGCGCCGGCGCCGTG
CAACCCGCGGTTAAACTTGAGGTGAGTTTTTTTTCAATCGCCTTATCGCTTTCTCATTCTTTGCGGTTTATTCGTCTCGC
TTTTGGACTCTGGAGGCCTTTCTTGCACGCCAATCTTGTTGAAGTCGCGTGAATTGCAGCTGTATT-CCCCCCTCGGTTC
TGCGAGACTCTGTCTCGTTACTCATCAATCTGTCGAGGAAGTTCCTTTGCCGTTATCTTTTTTTGGCCGTCCCATCGTTG
ATGTGTTCATACGGGTTGCGTGGTGTTCTTCGTTTGAATCTCGGGGGCTATTGTGATTCTAACCGGACAGTATGAGCTGG
GTAGGGGATGGAGTTCTTGTGTTCCGG----------------CGCCGGAGAGGATAAATCATTCATTCTCTGGCAACGG
ACTCCGGCCCCCGGGGTCGTTTTCGTGAGCGTATGGCTTTTGTGTGGACCCT-TGCCTTGGCCGTTGGCACCGTGTCTAG
TGTAGCTGGAGGTGGCCGATGGGCGACGAGGCAGGGTAGATAGATGGAGTAGTTGTGTTATACGCCGCATTTATCGCTTT
TATTTA----TTCCTCGCTCCATCCAATCCAGTCAGCAATAGGGC-------------------------------GAGA
AAAAAGGAAGCAGCAAGCGTGAAATCTTGAGTAATTTCTTTTTTTTTAAGTGTTCAAATCTTGAGTGATTTCGTAAAGTC
GATTGTTGCGGGGTTTTGAATTGGAAGGCGAATTGATTAATTATGGGAGTACCTAGAACTTATCTAGATGAGATATAATT
TGGTCTCATTTACCTGAAAAACAAGAACAGATACAACCCACATTAGCACACACATCTTATAGCATCATATCCAATGGCTA
TAAAAGGTGAATGAGACCAAATTATGTCTTATATAGATGAGTTCTAGCAAAACTGAGTAATTATTGTGTGTGTCGTTAGC
TGCGGATTTGGAATTACTCAAT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TAGTACATGTTGTGTGTGTGTGTG
TTTTCGCTGTGGACGAATGAATCCCCATCGCCATCATGTGATGGCTTCGCTCCTTCCTCTGCGCGTGGTCCCGCGTGTCA
TCTTGGGCCGCCTGTTTCCCGCACTCTCCGCGCGTGTTTCTCACCCTGGAGGGGT-AAATTTCGTTTCCTTCTGACTTGC
CTTGCAAGATTGGGACGCGGATCCTCTGCCGTGCCGCAGGGTGCCGTTCGGCGATGGTGGGCTCGCTGTGAATCAGCCGC
ACATGCTAGTGTCCCCAACGGCGTGTAACGTACGTCAGGAGAGCTGCTTCCGCAAGATTGTAGACTTCCTTCGGGGTTCC
GGCGCTGTTTCCCGTGGGT-----------------------------CC-------------------GGCCCCACGGA
GTTCCATGGCTAGTTTGACACC--GCATGTCATCGGGCTTTTCCTTTTTTGTCGTCGTTTAT------------------
---------------------------------------CTTCAGTGGAAATTAACGCGAAGATTGGAAGCTGGGTGAAG
CTTTTTTAAATAGGGAAACATAAACTTTTTCCTGGCTCTGCTTGCGGCAGGGTTGTTGTAAAGTGGTGCGTGTGCCTTT-
ACGTGTCAGTCCGGGATGCGGGTCCCTTTGGCGACCGACGTGCACAGGGGTGGGGTGGGGTGCAGCCCATCGGTCGCCAA
CGTGGTCATTGGATGCCGCAGTGACCACTCCCTGGTCCAGCATGGGCTCGTGAGTCGCGACTGGTGTGGTATCATGTCAC
CGCACCAGGCCCGCCAGGGCTGCGACTTCTTTCCTAAAAAAACGAAGTCCAACTCTACTACAGTAACT------------
--------------------------------------------------------------------------------
---TTCTTCTCAAAG----AAAT---------------------------------------------------------
----------------TACTACTCGTATAAGTGTGCTGGCTTATTTGTTGCT------AGTAGCAGCTGTCTCGATGCCT
TTGCATTGCATCTATGCGAGTACGGAGTAGTACAACTATTTTATTCCGCGATGATTT-CTTAACAGTGATTCCACGTGAT
TCCCTCGGATCTCGCATCTTGCCGAGATCCGTCTGGTTGTTGTCATCCTGTATTTGATTA---AGCAGTGTTCTTTCATA
TCTTTCTCGATTCTCCTGGAGCTTCCAACTAAAATCATTTTGGTTGATGTTGTGCAGGATCAAAAGACCGAGAACAATTA
CCGGGACGAGAAGGGCCACTTGCTGTTTGACCTCAACGAAGATCCAAGCATGGCGGAGGAGTGGTGAG------------
---------AGGCGAGGATTTTGCTAGCTAGTTGGTGTGTGCTCGGGGCAAATCAACCCAGCTGCTCATGTGTACATAAA
GGGCAAACCCAGTAGAAGAAGAGCCGGTGAGGGCGGGTTAAGCTGAGAACGGAGGGGGCTTAGAGGGTATACTC-ATCAT
TAGATTTATATCAGGGTTAACTTAGTCTGCTCTGCTCTGTTGGACGTACTGCATGCGCCGGTGCGCTTCTGGCTCGC-TT
GCTCAATGCCGTGTACTGCAGTCCCTGTTATTTTCATCTTTGTTTATCCTGTTTGTTATCCGAATCAACTGATACCGTGC
ATGAATTGAAACAATAATATATACTCCATTAGATATTTTCTTCTTGTTTGTTTCATGTTGGCTATTTGCTCAGCTGCTGC
TTAGGAGGATTTAATTAAAGTACGTTTTCATGTTGGCTATTTGCACAGCTGCTGCTTATTAGGAGGATTAACAGTCCGTT
TAATGGAATTGATGATTTACAGGCCGGCATTAGTGTTATTTTTTAGCTTAAACTTTTTCACGAGCAATGGTAAACTCTTT
AATGGAATTGTTTGTTCCATGTTGGCTATTTGCTCAGCTGCTTCTTGTTAGGAGGATTTACAGTCCGTTTAATGGAATTG
ATGATGGCATTAGTGTT------ACTTTTTAGTTTA-AACTCTTCCATGAGCAATGGTACACGCCCGTCCACTTTTTCT-
--GTACAATAAAGGTCATATTTACATGAACCTATTTATTTAATACTA---------------TATGA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AATGGTTTAGCACTGTGA
TTGACTTGGCTGGGCCTTCTTGTGACTTGTGAGCCGTTCGGGGCAGCCTGTCGCTTGGGTGGTTCAACTGAGGTGGATTT
GCCTGCGCCACTTTCTCCTTCCCCTCC-ACTGCTGTAAGCTTCGCCCGATGGGTTGGCCTTGTATAATGCTAAATGCTTA
GAAAAATGCTTGAAGAAATAAACCAGATTTTTTCTTAAGCATTCGGTGTCTATTTATATAGGGTAGATGTT
>chr7B_1
AACATACTCCATTCTCTGTTCGTGTGCATCCGGGCTATAGTCGTCCAACGGGTTGCCTTCATCCGTGGCGGCGCCTCATT
CTCAAACACAACATTGTCGAGATAATCTTCATTGAGGCATAATTCCTTCATCATTGCTTGTAGATCGCCTTGGTCCATCG
CCGCAGCCTTCAAAAG-TC--CACCGCCATGAAGCCCTAGCCCGAGAGTAGCTATCGAGCT-AAAATACTAACCCCCGAT
CAGCATGAGAACCCTAACCAAGGTCGAGCGACGATGCACGATCACCCCTACTCCATCCCGATCGAGGACCAAGCAAGAGA
GGGCT----------GGGAAAACTCAATACCAGTGGGGGCGA--------CGAGACGACGAGACGGCAGAAACCCTAGCG
GGGAGGGAA-----------------GTTTGGGCAGCCCTCCAAAAAAGAAAGTTTGGGCAGTTTGCA----GATACATG
AGAGCGAAATGCATCCACATCCGGATCCGGCCTGCCCTAATAAACTCGGATGCCTTTTCGCTCGGGCCCACCTTGGTGCC
AT--AAA----------------ACAAGGCAGAGTACGAACACGCATTCCTTCGCTCCCCACCAATCGAGTCGCGAGACA
ATTCCCTTACATAGAACTACTCCGACGGGACGGACCCACGTAACAGGGAGATGATTTCGCGAACGCAAAGCTCATGCACT
TTACCGACTCGCCCGGCCTCGACTTGACCCACCCGCAAGCTAAATGCAGGGGGCCCAGGGGCCGGTGAGACGGGTTCACG
AACACCGGGTCTAGGGCTCTAGGCGGCGGCCACTGCTGTCCGTCTCCTCCTCCTCGCCCAACTCGCGTCCGCCTCCGTCT
CCGCATCCACTTATAAAACCCATCCGCCCTCCCGTCGCCTCCCTCTTTTCCTCTATTTCTGCCAGAGAAAAGAAAGAAAT
CACACCTCCCATCCATCTCAGGGCGGCGGCGTGCGCGAGTTCGTCTCCTGCGGCTTTCCCCATGGCGGAGTACGACGAGC
AGGGCATGGCCATCGCGGCCGCCGAGATACTTCTCAGCCTCCGGAGCAGGAAGCTGGCGCGGTGGCCGGACTGGGTTCCG
CGCCCGTCCAGCGACCCCGCC---------GCGGATCTCCAGCGGCCGGAGGAGGCGGAGGACGAGCTGCCGCCGATTCC
GGAGCGATGGCCGAAGCGGCCGCGGTTGCCGCCCCGTGCGGTGGCGAAAGGAACCGCGTGGCTGCTGTCATGGGAGAGTC
CCTTTGCGCGGCTGGGGGAGCATCTTGTCGCCAGATCCGGTGCGTGCTCCAGCGGGGACGAGAGGGCGCGGTCGCACCCG
CGCGTCACGAAGGTGAAGCGCGAACCTTTGGCGGCGCGGAGGCCGGAGACACCGCCGTACTACGTCTCGGCCGCCGGATC
CGGCCCTTCCACCAGCGGCATGGA--------------------------------------------------------
-------------------------CAGGGCGCGGTCGCGGCGGCGGCAGCGCGTGAGCGAGAAGGCGCAGGCGACGGCG
GCCGCGTGGACTGACGCCGCCATGGCGGCATCGAGCCCGGAGACGCCCTTCGACTACGCCAACGCCGCTGGATCAGGGGC
GTCCTCGAGCGGGGACGAGGTGGCGCGGTCGACGGCGAAGCGCAAGGCGCAGGGGTCGGGCGGATCCGGAGTTCCTTCTA
GCGGCGACGAGGGGTGCAGCTCGCCGGCGAAGCGCGCGCGGGCGGACATCTCCATCGCCGTCGCCGTCCAACCCAAGGCA
GG---CGCGGTTAAACTTGAGGTGAGTTTTTTTTTAATCGCCTTATCGCTTTCTCATTCTCTGCGGTTTATTCGACTCGC
TTTTGGACCCTGGAGGCCTTTCTTGCATGCCAATCTTGTTGAAGTCGCGTGAATTGCAGCAGTATTTCCCCCCTCGGTTT
TGTGCGACTCTGTCTCGTTACTCATCAATCTGTCGAGGAAGTTCCTTTGCCGTGATTTTTTTTTGCCTGTCCCGTCGTTG
ATGTGTTCATACGTGTGGCGTGGCGTTCTTCGTCTGA----------------------------------ATGAGCTGG
TTAGAAGATGAAGTTCTTGTGTCGTACTCCGGCGCCAGCGCTTCGCCGGAGAGGATAAATCATTCTCTCGCAT---ACGG
CCTCCGGCCTCCGGGGTCGTTTTCGTGACCGTATGGCTTTTGTGTGGACCCTTTGCCTTGGCCGTTGGCACCGTGTCTAG
TGTAGCTGGAGGTAGGCGATGGCCGACGAGGCAAGGTAGATA----GAGTAGTTCTGTTATACGCCGCATTTATCGCTTT
TATTTATTTATTCCTCGC-----TCCATCCAATCAGTAAATAAGGGGTAGAAAAAAAAGGAAAAGTAATAGGAAGAGAGA
AAAAAGGAAGCAGCAGTCGTGAAATCTTGAGTAATTTA----------------------------------GTAAAGTC
GATTATTGCGGGGTTTTGAATTGGAAGGCGATTTGATTAATTAT------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TGTGTGTGTCGTTGGC
TGCGGATTTGGAATTACTCAAT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TACTCCATGT------TGTGTGTG
TTTTCGCTGTGGACGAAT----CCCCATCGCCATCATGTGATAGCT----------------------------------
--------------------GCACTCTCCGTGCGTGTTTCTCGCCCTCGAGTGGTAAAATTTCGTTTCCCTCTGACTTGC
CTTGCAAGATTG--------------------------------------------------------------------
------------------------------------------------------------TAGACTTCCTTCGGGGTTTC
GGTGCTGTTTCCCGTGCGGCCGCGTGGGTCCGGCCAGTTTTTGTGGACCC-------------------GGTCCCACGGA
GTTCGAAGG----TTTGACACCCAGCGTGTCATC-GGATTTTCCTTTTTTGTCGCCATTTATTTTGCTAAATTCAGGCGG
AAAATGCGGCCTACAGAAATAACCGCAGTAC------ATCTTCAGTGGAAAATAACGCGAAGATTGAAAGCTGGATGAAG
-TTTTTTTTATAGGGTAACAGAAAGTTTTGCCTGCCTCTGCTTGCGGCAGGGTTGTTGTAAAGTGGTGCGTGTGCCTTT-
ACGTGTCAGTCCGGGATGTGGGTCCCTTTGACGACCGACGTGCACA-----GGGGTGGGGTGCCGCCCATCGGTCGGCAA
CGTGGTCATTGGATGCCGCAGTGACCACTCCCTGGTCCAGCATGGGCTTGTGAGTCGCGACTGGTGTGGTATCATGTCAC
CGCACCAGGCCCGCCAGGGCTGCGACTTCTTTCCTTCAAAAACGAAGTCCAACTCTACTACAGTAACT------------
--------------------------------------------------------------------------------
---AGCTTCTCAAAAAAAAAAAT---------------------------------------------------------
----------------TACTACTGTTATAAGTGTGCTGGCTTATTTGTTGCTAGTACTAGTAGGAGCTGTCTCGGTTCCT
TTGCATTGCATCTATGAGAGTACGG---AGTACAACTATTTTATTCCGCGATGATTTTCTTAACAGTGATTCCACGTGAT
TCCCTCG-ATCTTGCATCTTGCCGAGATCCGTCTAGTTGTTGTCATCCTGTATTTGTTTA---AGCAGTGTGCTTTCGTA
TTTTTCTCAATTTTCCTGGAGCTTCCAACTCAAATCATTTTGGTTGATGCTGTGCAGGATCAAAAGATCGAGAACAATTA
CCGGGACGAGAAGGGCCACTTGATGTTTGACCTCAACGAAGATCCAAGCATGGCGGAGGAATGGTGACTGGTGAGAGGCG
AGGAGGACCCGGAGAGGATTTTGCTAACTAGTTG--GTGTGCTTGGGGCGAATCAACCCAGCTGCTCATGTGTACATAAA
AGGCAAAGCCAGTAGAAGAAGAGCCGGTGAGGGTGTGTTAAGCTGAGATCGGAG----CTTAGAGGGTATACTC-ATCAT
TAGATTTATATCAGGGTTAACTTAGTCTGCTCTCTTCTGTTGGACGTACTGCATGCGCCGGTGCGCTTCTGGCTCGCTTT
GCTCAATGCCGTGTACTGCAGTCCCTGCTATTTTCATCTTTGTTTGTCCTGTTTATTATCCGAATCAACTGATACGGTGC
ATGAATTGAAACAATAATATATACTTCATTAGGTATTTTCTTCTTGTTTGTTTCATATTGGCTATTTGGTCAGCTGCT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TCTTATTAGGAGGATTTACAGTCCGTTTAATGGAATTG
ATGATTTACCTTCTAGT------------------------------------ATGGTACACACCCGTCCACTTTTTCTT
CTGTACAATAAAGGTTATATTTACATGAACCTGTTTATTTGGTTATTTACAGTTTATAATAAATACTCCCTTCGTCCGAA
AATACTTGTCATCAAAATGGATAAAAGAGGATGTATCTAGACGATGTTTTAGTTTTAAATACATCTATTTTTATCCATTT
TAATGACAAGTATTTCCGGACGGAGGAAGTACTATCAAATAACAGTTTTGCTAGAACTCATCTAGATGAGATATAATTTG
GTCTCATTCACCTTTTATAGTCATTAGATATGATGCTATAAGATGCGTGTGTGCTGACGTGTATTGTATCTATTTTTATT
TTTAAAGTGGATGAGACCAAATTATATCTCATCTAGATGAGTTATAGGTACTCCCATCAAATAATGGTTTAGCACTGTGA
--------------------------TTGTGAGCCGTTCGGGGCAGCTTGTCGCATGGGTGGTTGAACTGGGGTGGATTT
GCCTGCGCCACTTTCTCCTTCCCCTG-TACTGCTGTAAGCTTTGCCCG--------------------------------
-----------------------------------------------------------------------
>chr7D_1
AACATACTCCATTCTCTGTTCGTGTGCATCCGGGCTATAGTCGTCCAACGGGTTGCCTTCATTCGTGGCGGCGCCTCATT
CTCAAACACAACATTGTCGAAATAATCTTCATTGAGGCATAATTCCTTCATCATTGCTTGTAGATCGCCTTGGTCCATCG
CCGCAGCCTTCAAAAG-TCTCCACCGCCATGAAACCCTAGCCCGAGAGTAGCTATCGAGCT-AACATACTAACCCCTGAT
CAGCATGAGAACCCTAACCAAGGTCGAGCGACGATGCACGATCACCCCTACTCCAGCCCGAGCGAGGACCAAGCAGGAGA
GGGCT----------GGGAAAACTCAATACCAGTGGGGGAGACGAGACGCCGAGAT--------GGCAGAAACCCTAGCG
GGGAGGGAA-----------------GTTTGGGCAGCCCTC-AAAAAAAAAAGTTTGGGCAGTCTACA----GATACATG
AGAGCGAAATGCATCCACATCCGGATCCGGCCTGCCCTAATAAACTCGGATGCCTTTTCGCTCGGGCCCACCTCCGTGCC
AT--AAAATAAGCAGGGCACTATACAACGCAGAGTACGAACACGCATTCCTCCGCTCCCCACCAATCGAGTCGCGAGACA
GTTCCCTTACATAGAACTACTCCGACGGGACGGACCCTCGTAACAGGGAGACGATTTCGCGAACGCAAAGCTCATGCAGT
TTACCGACTCGCCCGGCCTCGACTTGACCCACCCGCAAGCTAAATGCATGGGGCCCAGGGGCCGGTGAGACGGGTCCAGA
AACACCGGGTCTAGGGCTCTAGGCGGCGGCCACTGCTGTCCGCCTCCTCCTCCTCGCCCAACTCGCGTCCGCCTCCGTCT
CCGCATCCACTTATAAAAGCCACCCGCCCTCCCGTCGCCTCCCTCTTTTCCTGTATTTCTGCCAGAGAAAAGAAAGAAAT
CACACCTCCCATCCATCTCAGGGCGGCGGCGTGCGCGAGTTCGTCTCCTGCGGCTCTCCCCATGGCGGAGTACGACGAGC
AGGGCATGGCCATCGCGGCCGCCGAGATACTTCTCAGCCTCCGGACCAGGAAGCTGGCCCGGTGGCCGGAGTGGGTTCCC
CGGCCGTCCAACGACCTTGCCCCGGCGGCGGCGGATCTCCAGCGGCCGGAGGATGCGGAGGACGAGCTTCCGCCGATTCC
GGAGCGATGGCCGAAGCGGCCGCGGTTGTCGCCCCGTGCGGTGGCGAAAGGAACCGCGTGGCTGGTGTCGTGGGAGAGTC
CCTTTGCGCGGCTGGGTGAGCCTGTTCTCGCCAGATCCGGCGCGTGCTCCAGCGGGGAGGAAAGGGCGCGGTCGCACCCG
CGCGTCACGAAGGCGAAGCGCGCGCCTTTGGCGGCGCGGAGGCCGGAGACGCCGCCGTACTACGTCTCGGCCACCGGATC
CGGCCCTTCCACGAGCGGCATGGACCGTGCGCGGTCGCGGCGGCGGCCGCGCGTGAGCGAGAAGGCGCAGGCAACGGCGG
CCGCGTGGACGGACGGCGCCATGGACCGTGCGCGGTCGCGGCGGCGGCCGCGCGTGAGCGAGAAGGCGCAGGCAACGGCG
GCCGCGTGGACGGACGGCGCCATGGCGGCATCGAGCCCGGAGACGCCCTTCGACTACGCCAACGCCGCTGGATCAGGGGC
GTCCTCGAGCGGGGACGAGGTGGCGCGGTCGACGGCGAAGCGCAAGGCGCAGGGGCCGGGCGGATCCGGAGTGCCTTCCA
GCGGCGACGAGGGGTGCAGCTCGCCGGCGAAGCGCGCGCGGGCGGACGTCTCCATCGCCGGCGCCGTGCAACCCGCGCCA
GG---CGCGGTTAAACTTGAGGTGAGTTTTTTTTCAATCGCCTCGTCGCTTTCTCATTCCTTGCGGTTTATTCGTCTCGC
TTTTGGACTCTGGAGGCCTTTCTTGCATCCCAATCTTGTTTAAGTCGCGTGAATTGCAGCAGTATT-CCCCCCTCGGTTC
TGTGAGAC--------------------TCTGTCGAGGAGGTTCCTTTGCCGTGATTTTTTTGGGGT-GTCCCATCGTTG
GTGTGTTCATACGTGTGGCGTGGTGTTCTTCGTTTGAATCTGGGGGCTTATTGTGATTCTAACCGGATAGTATGCGCTGG
GTAGAGGATGGAGTTCTTGTGTTCCGG----------------CGCCGGAGAGGATAAATCGTTCATTCTCTGGCAACGG
ACTCGGGCCTCCGGGGTCGTTTTCGTGAGCGTATGGCTTTTGTGTGGACCCT-TGGCTTGGCCGTTGGCACCGTGTCTAG
TGTAGCTGGAGGTAGCCGATGGGCGACGGGGCAGGGTAGATAGATGGAGTAGTTCTGTTATACGCCGCATTTATCGCTTT
TATTTA----TTCCTCGC-----CCCATCCAATCAGTAATAGTAATAGGGGAGAGA-----------------------A
AAATACGAAGTAGCAAGCGTGAAATCTTGAGTACTA-------------------------------ATTTCGTGAAGTC
GATTATTGCGGGGTTTTGAATTGGAAGGCGAATTGATTAATTAT------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TGTGTGTGTCGTTAGA
TACGGATTTGGCATTACTCCTACTCAATTACTCCTTCCGTTCCTAAATATTTTTCTTTCTAGTCATTTCGACTACATAGG
AAGTAAAATGAGTGAATCTACACTCTAAAATATGTCTACATGTGATAGTCATTTGAAATGCCTAGAAAGACAAATACTCC
CTCTGTAAACTAATATAAGAGTTAGTTTACGGAGGACTATTTAGGAACGGAGGGAGTAGTACATATTGTGTTG-------
-------TGTGGACGAAT----CCCCATCGCCATCATGTGATGGCTTCGTTCCTTCCTCTGCGCGTGGTCCCTCGTGTTA
TGTTGGGCCGCCTGTTTCCCGCACTCTCCGCGCGTGTTTCTCACCCTGGAGGGGT-AAATTTCGTTTCCTTCTGACTTGC
CTTGCAAGATTGG-------------------------------------------------------------------
-------------------------------------------------------------AGACTTTCTTCGGGGTTCC
GGTGCTGTTTCCCGTGGGT-----------------------------CCGGCCAGTTTTGGCGGACCCGGTCCCACGGA
GTTCCATGGCTAGTTTGACTCC--GCGTGTCATC-GGTTTTTCCTTTTTTGTCTCCGTTTATTTTGCTAAATTCAGGCGG
AAGATGCGGCCAACAGAAATAACCGAGGGTACTAGTAATCTTCAGTGGAAATTAACGCGAAGATTGAAAACTGGTTGAAG
CTTTTTTTAATAGGGAAACAGAAACTTTTTCCTGCCTCTGCTTGCGGCAGGGTTGTTGTAAAGTGGTGCGTGTGCCTTTA
ACGTGTCAGTCCGTGATGTGGGTCCCTTTGGCGACCGACGTGCACA-----GGGGTGGGGTGCAGCCCATCGGTCGGCAA
CGTGGTCATTGGATGCCGCAGTGACCACTCCCTAGTCCGGCATGGGCTCGTGAGTCGCGACTGGTGTGGTATCATGTCAC
CGCACCAGGCCCGCCAGGGCTGCGACTTCTTTCCTC--AAAACGAAATCCAACTCTACTCTAGTATAACTACTCCTTCCG
ATCGGAATTATTTATCTCAAAAATGGATGTATCTAGAACTAAAATACATCTAGATATATCCATTTCTGCGACGAGTAATT
CCGAGCTTCTAAAAAATTACTCCCTTCGTCCCATAATATAAGAACCTTTTTAACACTAATGTAGTGTAAAAAACAATCTT
ATTGGGACGGAGGGAGTATTACTCGTATGAGTGTGCTGGCTTATTTG---------CTAGTAGCAGCTGTCTCGATTTCT
TTGCATTGCATCTATGGGATTACGG---AGTACAACTATTTTATTCCGCGATGATTT-CTTAACAGTGATTCCACGTGAT
TCCTTGG-ATCTTGCATCTTACCGAGATCCATCTATTTGTTGTCATCCTGTATTTGATTATTAAGCAGTGTGCTTTCATA
GCTTTCTCGATTTTCCTGGAGCTCCCAACTAAAATCATTTTGGTTGGTGTTGTGCAGGATCAAAAGACCGAGAACAATTA
CCGGGACGAGAAGGGCCACTTGATGTTTGACCTCAATGAAGATCCAGACATGGCGGCGGAGTGGTA-------AGAGGCG
AGGAGGAGCAGGAGAGGATTTTGCTAACTAGTTG--GTGTGCTCGGGCCAAATCAACCCAGCTGCTCATGTACAT---AA
AGGGCAAGCCAGTAGAAGAAGAGGGTGGATTAA--GGTTAAGCTGAGATCGGAGGGGGCTTAGAGGGTATACTCGATCAT
TAGATTTATATCAGGGTTAACTTAGTCTGCTCTGTTCTGTTGGACGTACTGCATGCGCCGGTGCGCTTCTGGCTCGC-TT
GCTCAATGCCGTGTACTGCAGTCCCTGTTATTTTCATCTTTGTTTATCCTGTTTATTATCTGGATCAACTGATACGGTGC
ATGAATTGAAACAATAATATATAGTTCATTAGATATTTTCTTCTTGCTTGTTTCATATTGGCTATTTGCTCAGCTGCT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TCTTATTAGGAGGATTTACAGTCCGTTTAATAGAATTA
TTGATTTAGAGACCGGCATTAGTACCTTTTAGTTTAAAACTCTTTCATGAGCAATGGTACACACCCGTCCACTTTTTCT-
--GTACAATAAATGTTATATTTACATGAACCTGTTTATTTGGTTACTAACAGTTTATAATACTATGA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AATGGTTTAGCACTGTGG
TTGACTTGGCTGGGGCTTGTTGTGACTTGTGAGCCGTTGGGGGCAGCTTGTCGCATGGGTGGTTGAACTGGGGTGGATTT
GCCTGCGCCACTTTCTCCTTCCCCCTCTACTGCTGTAAGCTTCGCCCG--------------------------------
-----------------------------------------------------------------------
>SNPs
---S-----S-----S----S---SSS---------------S------SS-S-----S-----S-S-----S----SS-
-------------SSS--S---------S---S---------------------------------S-S-----------
S----S-------SSSS----S--S------------------S------S------S-S-S-----------S------
--S--S--------------------S------------S---S-----SS---S----------S--S-----------
----SSSSSSSSSSS------------S--S-----S-------------------------------------------
---------SSSSSSSSSSSSSSSSS-------------------------------S---------SSSSS--------
-------S---------------------------------------------------------S---------S----
--SS----S----------------------------------S------------------------------------
----------------------------------------------------------S-----S---------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
---------S----------------------------------------------------------------------
----S-S-------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------------------S-------------------------------------------------------------
------------------------------------S-------------------------------------------
------------------------------------------------------------------S-SSSSS---S-SS
SSSSS---------------------------------------------------------------------------
---------------------------S--------------------------------S-------------------
--S--------------------------------------------------S--S----------S------------
-------------S--S------------------------S----SS-------------------S------------
----S---------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-------------S----------------------------------------S-------------------------
------------------SSSSS--S-----S----S-----S-S-----------------------------------
-------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
----S---------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
------------------SSSS---------------------------S----------------------S-----S-
-S------------------------------------------------------------------------------
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------
--S--------------------------------------------------------------------S--------
--------------------------S-------S--S----------------S-------------------------
------------------------------------------------------------------S-------S-----
-------S------------S-------------S---------------------------------------------
------------------S---------------------------SSSSS-------------------------S---
--------------------------------------------------------------------------------
-----------------------------------SS-------------------------------------------
--------------------------------------------------------------------------------
---SS---------S-----------------------------------------------------------------
----------------------------------------------------------------------------S---
----------------S--------SSS----------------------------------------------------
-------S----S---------------------S------------------------------------S--------
------------S-------------------------------------------------------------------
----------------------S--------------------------------------------S------------
------------S-------------S-------SS--------------------------------------------
S------S-------------------------S--------------S-------------------------------
----------------------------------S---------------------------------------------
------------------------------------------------------S--------------------S----
-------------------------S------------------------------S---------------------SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---------------------------------
-----SSSSS--S--S---------S------------------S-----------------S-----------------
---------------S----------------S-------SS-SS-S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S---S----------------------------S------S---------S-----S---------
-------------------------S----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_166
--------------------------------------------------------------------------------
------------------------------------------------------------------ACTTTGGTCCATCG
TCGCAA--------------------------------------------------------------------------
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>reverse_2097
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----------------TGCGTGGTGTTCTTCGTTTG--------------------------------------------
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>forward_1948
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--------TCTGGAGGCCTTTCTTGCAC----------------------------------------------------
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>reverse_4248
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-------GATCTCGCATCTTGCCGAGA-----------------------------------------------------
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>forward_3467
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-------ATGGCTAGTTTGACACCGCA-----------------------------------------------------
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>reverse_4594
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---------------------------------CGGGTTAAGCTGAGAACGGA---------------------------
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-----------------------------------------------------------------------
