>input_sequence_27341
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----------------------------------------------CACGGTAGCGCCACCCCACCTCGCGC--------
---CCCGCCCATGGCCCGCCGCCTCCTCGCCCGCAACCTCCTCCCGCACCTCCGCCTCGCCGCGCGCTGCCCGGCGCCCC
ATCCCTCGCTGGCCCTCGTCGCCACGCGCCGCCTGACCCCCGG-------------------------------------
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------CCCGGCCCCGCCTCCC----------------------------------------------------------
--------------------------------CGGCTGTGGGCTCCCCAAGGTGCGTCGAC----------CCCACCTCC
CCTCCTCCCTCTGGTTTTAGGATGAATCCGGCGGGCTAGTTGT-GGCAGTGGAGCCACCACCTGCAACTGCGAATGCTTT
CTGAATTCCCTCTGCCGCGTAGTGACAGACACATATGTGTTGATATGTTCCAGTGTTGTGTAAGCTATCCAGTTAAATCT
GTACTGGCTGTTTTAACGAGTTAAACCTATTGATCTGAGCTCTAGGATGTAGGAACTGCGCGACTTACGCCACAAGCGTG
CTAAATTTGCCATGTGTGCTTGCTTCTTCTGTAT--------GTT-----GGGAAGAGATACTGTCAGTGTAGTGTATCT
GTATA-GGTTTGAAGATAACTCAACACTGTGCTTATTTCCCAAGAAAGGCAGATGAGATAAATATGATTACCAAGTTGCA
GATGCGAATTAAGATAGCGCATAACCTGAGAACCTAGTGCTGGAATGGGCATCACATAGATGATCGTTCA---GCAATCA
AATGTTCTCATAA-AATATTTGGCTTCACATCATTTTTAATTTCTGTGTCTGTGAGTTACCTGAGGCACTTCATTTATAT
CATATTTTCTAATCTATATGCTGAATAGGAGAGTTTTTTTTTATATCGGAAGTAATATGCATCTTGAGG-----------
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------------GTGCTATCTTGCCATCCTTCTAATCAATGCTTATGATGTTAATCTGTACAAGTCCAGTGATTTTATAT
CTTTTTCAGTTGTTGTATGGGAGATATGCCTGCTAATGGTGCTACAGTACCAAGTGGTAGATGATCTAATAGAACGTCTA
CTCTCCTCCGTCTGGTTATAAGATGAACTCCATGGGCTTATTGTGGCAGTGGAGCCAGCACCTGCAACTGCTAAGCTTTA
TGAATTCCTGTACCGCTTAGTGACAGTCTGACAGATATGCGTTGATATGTTCTAGTGTCGTGTAAGCTATTTCACTTCAT
TCACCTGTACTGGTTGGTTCATCTATCTAGTTAAACCTATTGGTCTGAGCTCTAGGCAGTAGAAACTGCATGCCCTACGG
CATAGTCGTGCTAAATTTGCTGTGT-TGTTGGTTCTGCTGTATAAATAGAGGTTGAAAAGAGATACTGAAAGCTGACACC
CTTGCTGTCAGTGTCTCTGTATAAATCTGAAGATAACTCAGTACTGTGCTTATTTCTGAGAAATTTT-GATGAGAAAAAT
ATGATGAACAAGTTGCAGATACGAATTGGATAACGCATAACCTGAGAACCTACTGCTGAAATGGACATCACACAGTTGAT
CTTTCAGCAATCAAGTGTTCTTGACG----------------TA-TTCTTAAATTTCTGTGTCCAGGATTTACCTGATGC
ACTTAGTGCATATTATTGCTTCTAAATTATATTCTGACTTGCATCATTTTTATGTGGGAAGTAACATGCATCTTCATCAT
ATAAAGTCATGAGAGTACAATGTTGTCATCCTTTTTAGTCGATGCTTATGATATTACTCTCTACTATTCCA--GATTTTA
TATCTTTTTCACTTGTTGTATGGAAAATATGCCTGTTATGGTGCTACTGTCCATACCAAGTGGTAGATGATTTAATAGAA
G-GTTCACTCGGTGACATTCATCATATCGATGAATAATTTTTATACCAAATCCTTT-CTGAGTACAATTGTTTGCCTGCA
AGAGATTTTTTTACTGAAGGCCTTATC--TCTGTCCAGGATCACGGTTCTTTGCTGATGATCGATCACACTACGATCTGT
TTGGTAAAAGAAGGCCAGGTGATGAAGAGTTCAGGAAAGCATGGCAGGAGAATGTTGACGAGGAGGATTGCCTATGGACT
GCCAGTGAGGATGAGGATGAGGAGAAAGAGAATGATACAAAAATGGAACGGGAAATCAAGAAAGTGAAGAAGCAAGCCAA
GGAAAATGCTAACCTTATTGATGGTGATGACAGTGATGAGTTAAGAAGCATATGTCCTGAGAGCGATGAAGACGATATGA
ATCTCTGGAGTGGCAGTGAAGAGGACGATGACAATGATATCCCTACCGAGCCACATCCCAATGAACGCAGTGATTCATAT
ATAGACAAGGTGTTTGAATTTGATGAGACGCCTAAATACCGCACAATCTCTGAGCTGTTGAAAGCTGAGAAGGAACCACC
AGAGCTCTCACCAGGAAAGCAAGCAAGAAAACTTGCTGTAGAAAATGCTCTCAAGAAGTTAAAAAAAGGGCCTGATGGAC
GCTACATTAACGTATTTGATGTTGTCACTGATATAGATATCCTGATTGGAGCATTTGAGAACATTGTTTCAGGACCAGAG
TATGCAGAGCTGCGGGAGGGCGGACCAAAGAAGCTCAATATCCAGTTCTTCAAGGATATACAAGCACGCATGAGAGATCC
AAATTTCAATTTTTCTCCAGAGTTAAAGTTGAAGCCTAAGAGTAAGTTAGTGCCTAAGAAGAAATGGCAGAAAGCACAAT
CGAGGAAGAGGAAAAATGACAAACGTTGAGCTGAGAACAGTCGACAGTAATGTATTTCTCTTCCAGGATGCTCT--TCAA
ATGGTGGTCAAGTTATCTGTAGTGTTGTGATCCATGATGAATATCTTCTGTAACATGACAGAATTAG-TAAGAAAAGTAC
CTCTGTCCATATCATTTCAATGTATGTTATGTTTGCCGAACAAATGGGGTCTGTTTTC----------------------
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>chr3D_1_TraesCS3D01G031500
GCATCAGTGAAGAATTCTGGCGACCCCCTGTTCCCCCATCCCTAAAGATAGAT-AATGGGGCAATGGCTCCCCT---TAA
TAAGATAGACAGTGCGGCAATGGCTTCATCCTAAGATAGATAGTGGGGTTGGCTCTTCTTCGGCGAGTTCGGGATGAACC
AAGAAAAATGACTGACACGAGGGAAATGTTCAGGCGACTAAGATATAGCAAAACCGAAAAAGAC-AAAAAAAACGTAACC
GTTGAACTCACTCCCTCCATCTCTTTTTAGTTTGCATATAAAATTTGGTCAAAGTCAAACTTGGTAAAGTTTGACTAACT
TTATAGGAAAAAATATCAATATTCACGAGATGAAATCAATATTATAGATGTATCATGAAATTAACTCTCATCTTCAATGC
GTCTTCAATGCTGCAACTCCATCGACTAGCATCTTGGTAGCAAGGATCAAGGAAGAAGACGCGCTTTGGGCTACCGCGGG
TGCTCGAGGCCTGCGTGTCATCCTTCCACAGACCTGGGACGTCCACTGATGTTTTTGTGTTTTTGCCTGTACCGGAGCCT
CCTAGGAGGATGTAACAAACTATCTCTCTTTTCAATATAATGAAACGCAAAAGCCTTTTGTGTTTTCTCGAAAAATTAAC
TCTCATACCATATAACTTTAGCATTGTAGATGCTGATAATTTTTTGATATAAATTTGGTCAAACTTTGTTTATTTTTTAC
CTTGACCAAATTTTATATGCGAAGTAAAAAAGAAACGGAGGGATTACCTGTTTTTTTTTAGCGGCACACTTACCTGGTCG
TAATGGGACATTTCCATGCCGTCAAAAAAATGGGACATTCCATTAAAAAAAAGGACATTTCCATT---------------
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------------------------TTTTAGGGAGGGGCATTTTCATGAGTTGGGTCGCATTTGAGCAATGCCAGGCC-TT
GATCCATCACGAAGCAGGCCCATTTCCACCTCCATGCC--CACTCTGCTACCGCCTTCTT---------CTCCCCTT---
---------------------------CCGACCTCCATGGGCGCCTCACGGTAGCGCCACCCCACCTCGCGC--------
---CCCGCCCATGGCCCGCCGCCTCCTCGCCCGCAACCTCCTCCCGCACCTCCGCCTCGCCGCGCGCTGCCCGGCGCCCC
ATCCCTCGCTGGCCCTCGTCGCCACGCGCCGCCTGACCCCCGG-------------------------------------
--------------------------------------------------------------------------------
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------CCCGGCCCCGCCTCCC----------------------------------------------------------
--------------------------------CGGCTGTGGGCTCCCCAAGGTGCGTCGAC----------CCCACCTCC
CCTCCTCCCTCTGGTTTTAGGATGAATCCGGCGGGCTAGTTGT-GGCAGTGGAGCCACCACCTGCAACTGCGAATGCTTT
CTGAATTCCCTCTGCCGCGTAGTGACAGACACATATGTGTTGATATGTTCCAGTGTTGTGTAAGCTATCCAGTTAAATCT
GTACTGGCTGTTTTAACGAGTTAAACCTATTGATCTGAGCTCTAGGATGTAGGAACTGCGCGACTTACGCCACAAGCGTG
CTAAATTTGCCATGTGTGCTTGCTTCTTCTGTAT--------GTT-----GGGAAGAGATACTGTCAGTGTAGTGTATCT
GTATA-GGTTTGAAGATAACTCAACACTGTGCTTATTTCCCAAGAAAGGCAGATGAGATAAATATGATTACCAAGTTGCA
GATGCGAATTAAGATAGCGCATAACCTGAGAACCTAGTGCTGGAATGGGCATCACATAGATGATCGTTCA---GCAATCA
AATGTTCTCATAA-AATATTTGGCTTCACATCATTTTTAATTTCTGTGTCTGTGAGTTACCTGAGGCACTTCATTTATAT
CATATTTTCTAATCTATATGCTGAATAGGAGAGTTTTTTTTTATATCGGAAGTAATATGCATCTTGAGG-----------
--------------------------------------------------------------------------------
------------GTGCTATCTTGCCATCCTTCTAATCAATGCTTATGATGTTAATCTGTACAAGTCCAGTGATTTTATAT
CTTTTTCAGTTGTTGTATGGGAGATATGCCTGCTAATGGTGCTACAGTACCAAGTGGTAGATGATCTAATAGAACGTCTA
CTCTCCTCCGTCTGGTTATAAGATGAACTCCATGGGCTTATTGTGGCAGTGGAGCCAGCACCTGCAACTGCTAAGCTTTA
TGAATTCCTGTACCGCTTAGTGACAGTCTGACAGATATGCGTTGATATGTTCTAGTGTCGTGTAAGCTATTTCACTTCAT
TCACCTGTACTGGTTGGTTCATCTATCTAGTTAAACCTATTGGTCTGAGCTCTAGGCAGTAGAAACTGCATGCCCTACGG
CATAGTCGTGCTAAATTTGCTGTGT-TGTTGGTTCTGCTGTATAAATAGAGGTTGAAAAGAGATACTGAAAGCTGACACC
CTTGCTGTCAGTGTCTCTGTATAAATCTGAAGATAACTCAGTACTGTGCTTATTTCTGAGAAATTTT-GATGAGAAAAAT
ATGATGAACAAGTTGCAGATACGAATTGGATAACGCATAACCTGAGAACCTACTGCTGAAATGGACATCACACAGTTGAT
CTTTCAGCAATCAAGTGTTCTTGACG----------------TA-TTCTTAAATTTCTGTGTCCAGGATTTACCTGATGC
ACTTAGTGCATATTATTGCTTCTAAATTATATTCTGACTTGCATCATTTTTATGTGGGAAGTAACATGCATCTTCATCAT
ATAAAGTCATGAGAGTACAATGTTGTCATCCTTTTTAGTCGATGCTTATGATATTACTCTCTACTATTCCA--GATTTTA
TATCTTTTTCACTTGTTGTATGGAAAATATGCCTGTTATGGTGCTACTGTCCATACCAAGTGGTAGATGATTTAATAGAA
G-GTTCACTCGGTGACATTCATCATATCGATGAATAATTTTTATACCAAATCCTTT-CTGAGTACAATTGTTTGCCTGCA
AGAGATTTTTTTACTGAAGGCCTTATC--TCTGTCCAGGATCACGGTTCTTTGCTGATGATCGATCACACTACGATCTGT
TTGGTAAAAGAAGGCCAGGTGATGAAGAGTTCAGGAAAGCATGGCAGGAGAATGTTGACGAGGAGGATTGCCTATGGACT
GCCAGTGAGGATGAGGATGAGGAGAAAGAGAATGATACAAAAATGGAACGGGAAATCAAGAAAGTGAAGAAGCAAGCCAA
GGAAAATGCTAACCTTATTGATGGTGATGACAGTGATGAGTTAAGAAGCATATGTCCTGAGAGCGATGAAGACGATATGA
ATCTCTGGAGTGGCAGTGAAGAGGACGATGACAATGATATCCCTACCGAGCCACATCCCAATGAACGCAGTGATTCATAT
ATAGACAAGGTGTTTGAATTTGATGAGACGCCTAAATACCGCACAATCTCTGAGCTGTTGAAAGCTGAGAAGGAACCACC
AGAGCTCTCACCAGGAAAGCAAGCAAGAAAACTTGCTGTAGAAAATGCTCTCAAGAAGTTAAAAAAAGGGCCTGATGGAC
GCTACATTAACGTATTTGATGTTGTCACTGATATAGATATCCTGATTGGAGCATTTGAGAACATTGTTTCAGGACCAGAG
TATGCAGAGCTGCGGGAGGGCGGACCAAAGAAGCTCAATATCCAGTTCTTCAAGGATATACAAGCACGCATGAGAGATCC
AAATTTCAATTTTTCTCCAGAGTTAAAGTTGAAGCCTAAGAGTAAGTTAGTGCCTAAGAAGAAATGGCAGAAAGCACAAT
CGAGGAAGAGGAAAAATGACAAACGTTGAGCTGAGAACAGTCGACAGTAATGTATTTCTCTTCCAGGATGCTCT--TCAA
ATGGTGGTCAAGTTATCTGTAGTGTTGTGATCCATGATGAATATCTTCTGTAACATGACAGAATTAG-TAAGAAAAGTAC
CTCTGTCCATATCATTTCAATGTATGTTATGTTTGCCGAACAAATGGGGTCTGTTTTCAGTAGTCTATTTTAATTCAGCA
AGCTGGGACGTGATTCTCTCCGTTTACACTGTAAATAGCTTGTAGCTAGATGGAAATGATGTACTCCATCCGATCCATAT
TACTTGTCGCTGCTTTAGTACAATTTCTACTAAAGCAGCGACAAGTAATATGGATCGGAGGGAGTACTCAAATTGTTGCT
CTAGCATACTTCTCATTTA----AGGAAACTAACCAACTTTCTTTGAAACACTTGCTCGATGTGCGAGTTGATCAGTAAT
AATATTAGGGTGCTAATTACTGTTGACAACCTGGTGTTACTGCTAAGGATTACTGAGGTCAGGCTTTGCAACTCAGACTT
GTATTCCTACAGCATCAGAAGCTTGAAACACTTGTCTCCCTTCTTATTGCATGACAAGCTAGCAGTTTCCTTTACACAAT
GGTTCCTATGTATGACATATCTGCTCATTCCGCTGTTTAGGTTGGAGTTCTGCATGATGCATTATTATTATTTTGGCTGC
CTTTTCTTCCTTTTTATTTTGTATTATTGAGTAGTGGACATGCTTAGGATGAGGAAATATAGATTTACACTTGCTATTTT
CTTATGTGGTACATGTATGCACTTGCTTA--TTATCTAGGATGTGTTCAAACCCCAAATAATCTGTTTTAGGCGATTAAA
GTATGATCGAATGTTACCTCTTTGATTGGAGTACTGCTGGCGCACATTCTAGCGTGCTAATGCTAACCTTGTGAAGACTG
TTGTCATTCCACTACACCATGTTGGATAGGCTGGACACTGGAGAGATTCATTTTGCATGTTAAAAAACTTTTGAATTTGT
CTCAGAACAGTCCAAAGCTGCTCAACATGGCTTGCTTTTATTTGCTAGCTGGATCTGATTGTCACACTAACAGTGCTCAT
AAACGCGCTGTCGACTGGTTATAGATGTGCTTAATATTCTGTCGGCAACTGAACTTTCGAGCTTTCAGTATGGCA-CCCC
TTACTCTGTACTGTCTACCCTAATA
>chr3B_2
-CATCGGTGAAGAATTCTGGTGACCCCCTGCACCCCCACCC-TAAAGATAGATAAATGAGGCAATGGCTCCCCCTAATAA
---GATAGATAGTGGGGCAATGGCTTCATCCTAAGATAGATAGTGGGACCGCCTCTTCTTCGGCGAGCTCGGGATGAACC
AGGAAAAATGACTAACATGAGGGAAATTTCCAGGCACCCGAGATATAGC-------------------AAAAACGTAACC
GTTGAACT------------------------------------------------------------------------
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--------------------------------------------TACCTGTTTTTTAGCGGTACTT-ACTTACCTGGTGG
TAATGGGATATTTCCATGCCGTAAAAAAAATGGGACATTCCATTATAAAAGTGGACATTTCCCATGATTTTTCTAGGGAA
GGACATTTCCATGAGTTTTTTTTTGAAAGTAACTAGGGAATTTATTCAAAGTTCAACACCTCCGGAATACAAGCAATATC
AGGAAGGATCCCTAGCCACACGTGGCGGCCCACCGGCAGAGACGCAGCTCCTTTTGCAACCGAGTGGGCTTCAAAATTAT
TTTCTCTACGTTCAGAACGAAAGTTAATTGAATTGAAAAAGTTCCTAGTAACTTGAATCTCCTGCAGAACCGACGCGTAC
ACTGGTATTGCATGTTGATTTATGTTGGAGATTACCTCTAAACAGTCTGAGGCAAGCATCAGGTCCTGCAGGTTCAGATC
ATTAGCGAGGGCAAGGGCCTCACTGCATGCATGTGCCTCCAAGCTCGCCGGATCAGTCAAACCCTCAAGAACTAAAGCTG
AAGCGCCAAGAAACTTGCCAGTCTTGTCTCGGCACACCACAGCCGCCGCTCCCTTGTTGCCCAAAGTTGATATGGCGCCA
TCACAGTTTAGCTTCACTGCTTCTCCATCAGGTGGCAGCCATGCCCGCGCTCTGGGAGCCGCCGGTGCTGGTGCCGATCG
CGATTTTTGGGCTTCGACTATATCCAGCTCCTCCAAAAAACATCTTATAAAGTTCATGGTTGACAGTGGGCTTTGAAACT
CGTTGTCATGGATTGCCTTTCTGCGAGCCCACCAAATAGCCCACATTGTAACAAGTACTCGCGTTAGATCCTGTTGGGAG
GTCGATTCAAACAGCCAAAACAACCATAGCCTGGCATCAGCATTTTGATTTGAGATTACATGCTCCAGGAGCTCCTCGTC
CCCCAATGCCCAGACGCATCTAGCCATGCGGCAGCTCAGCAATGAGTGACGCCAGGTATCTTCCCCAGCTCCACAGATT-
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-----------------------------GAACAAGCCGGCGTGTCCGCCATGTTTCTTTCGTGACGGACTAGCCCCGTA
GGGATTGATGTGTGTGCTAGCCTCCAGACAAAAACCTTAATCTTGGAGGGAACCTGAACTTCCAATAGCTGCGACCAAGA
GCTTTTATCTGCTGAAATATTGGAGTGCCCCGGTCGGTGATCAAGCCAGTCCTCCCTCTGTGCTTTAACTGC--------
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----------------------------------AGACATTTCCATGAGTTGGGTCGCATTTGAGCAATGCCAGGCCTTT
GACCCATCACGAAGCAGGCCCATCTCCACCTCCACGCCCCCACTCCGCTGCCGCCTTCCTTCTTCTCCCCTCCCCTCCTG
GCGCGTTCCTTCCTGTAAAACCTCCTCCCGGCCTCCATGGGCGCCTCACGGTAGCGCCACCCCACCCCCGCCCCACCTCC
CCTCCCGCCCATGGCTCGCCGCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCCCCGCCCCGTCTCCC----------------------------------------------------------
--------------------------------CCGCTCTGGGCTCCCCAAGGTGCGGCCTCTCCGGATTCGACC-CCTCC
CCTCCCCCCTCCTGTTC---GGTGAACCCCGTCGGCTTTGTTTCCGCA-------------CTGCAACTGCGAATGGTTT
CTGAATTTTCTGTGCCGCGTAGTCACAGACACATACCCT-----------------------------------------
-------------------------------------AGCTCTAGGATGTAGGGACTGCACGCCCCATGCT-----CGTG
CTAAATTTGC---GTGTGCTTGGCTCTGCTGTATGGCTCGAGGTTGAGAAGAGAAGAGATGCTGTCAGTGTC-----TCT
GTATA-GGCCTGAAGATAAATCAACACGGTGCTTGTTTTCCGAGAAACACAGATGGGATCAATATGATTACCAATTTGCG
GATGCGAGTTG-GATAGCGCATAACCTGAGA------TGCTGAAATGGACATCTCACACGGATGATTTCTCAGGCAATCA
AGTTGTCCTAATGCGATAACCGGTTTCAGACATTTTGTAGTTTCTGTATCCGTGAATTACCTGGTGCACTTAGTGCATAT
TATAGCTTCCAAGCTATATTCTGACTTGCAGTG----TTTTTATATGGGAAGTAATATGTATCTTTG-------------
-------------------------------------------------------------------------ATCCTAT
AAAATCATGGGAGTACTATGTTGCCATCCTTTTGGTGATTGCTTATGATGTTACTTTCTATGACTCCAGTGATTTTATAT
CTATTTCACTTGTTGTATGGAAGATGTGTCTGCT-ATGGTGCTACCATACCGAGTGGTGGACGATCTAATAGAAAGGTCC
ACTCGGTGATATTCTTCATGTCGATGAATGATTTTTATACCAAATCCTTGCTGAGCACAAATGTACAATCCTTTGCCTGC
CAACGAATTTT---------------------------------------------------------------------
---------------------------------------------------------------AACTGCACGACCTACGT
CACAAGCGTGCTAAATTTGCCATGTGTGCTTGGTCTGCCGTATGACTCGAGGTTGAGAAGAGA-----------------
--TGCTGTCAGTGTCTCTGTATAAATCTGAAGATAAAACAATACTGTGCTTATTTTCCGAGACAGAAAGATGAGACAAAT
ATGATTCCCATGTTGCAGATGTGAATTACATAGCGCATAACCTGAGAACCTATTGCTGAAATGTACATCACGCAGATGAT
CTTTCAGCAATCAAGTGCTCTTATACAGTACCCGGTTTCAGATTTTTTTTTAATTTCTGTGTCTGTGAATTACCTGATGC
GCGT--TGCATATTATAGCTTCTAAACTATATTCTAACTTGCAGTGTTTTTGTATGGGAAGTA-----CATCTTCATCAT
ATAAAGTCATGAGAGCATGATGTTGCCATCC-TTTTAGTCAATGCTTATGGTGTTATTCTTGATGTTTCCAGTGATTTTG
TATCTTTTTCACTTGTTGTATGGAAGATATGCCTGGTATGGTGCTAC----CATACCTAGTGGTGGATGATCTAATAGAA
AGGTCCACTTGGTGATATTCTTCATGTTGATGAATGATTTTTGTACCAAATTCTTTGCTGAGTACAATTGTTTGCCTGCA
AGCAAATA-TTTACTGAAGGCCTTATC--TTTGTCCAGGATCACGGTTCTTTGCTGATGATCACTCACACTATGATCTGT
TTGGTAAAAGAAGGCCAGGTGACGAAGAGTTCAGGAAAGCTTGGCAGGAGAATGTTGACGAGGAGGACTGCCTATGGACT
GCCAGTGAGGACGAGGATGAAGAGAAGGAGAATGATACAAAAATGGAGAGGGAAATCAAAAAAGTGAAGAAGCAAGCCAA
GGAGAATGCAAACCTCATTGATGGTGATGACAGTGATGAGTTAAGAAGCATATGTCCTGAGAGCGATGAAGACGATATGA
CTCTCTGGAGTGGCAGTGAAGAGGACGATGACAATGATATCCCTACCGAGCCACATCCCAATGAACGCAGTGATTCATAT
ATAGATAAGGTGTTTGAATTTGATGAGACGCCTAAATATCGCACAATCTCTGAGCTGTTAAAAGCCGAGAAGGAACCACC
AGAGCTCTCTCCAGGAAAGCAAGCAAGAAAACTTGCTGTCGAAAATGCTCTCAAGAAATTGAAAAAAGGACCTGATGGAC
GCTACATTAACGTATTTGATGTTGTCACTGATATAGATATCCTGATTGGAGCATTTGAGAACATTGTTTCAGGACCAGAG
TATGCAGAGCTGCGGGAGGGTGGACCAAAGAAGCTCAATATCCAGTTCTTCAAGGATATACAAGCACGCATGAGAGATCC
AAATTTCAATTTTTCTCCAGAGTTAAAGTTGAAGCCTAAGAGTAAATTAGTGCCTAAGAAGAAATGGCAGAAAGCACAAT
CGAGGAAGAGGAAAAATGACAAACGTTGAGCTGAGAACAGTCGACAGTAATGTATTTCTCTTCCAGAATGCTCT--TCAA
ATGGTGGTCAAGTTATCTGTAGTGTTGTGATCCATGATGAATATCTTCTGTAACATGACAGAATTAG-TAAGAAAAGTAC
CTCTGTCCATATCATTTCAATGTATGTTATGTTTGCCGAACAAATGGGGTCTGTTTTCAGTAGTCTATTTTAATTCAGCA
AGCTGAGACGTGATTCTCTCCGTTTACACTGTAAATAGCTTGCAGCTAGGTGGAAATGATGTACTCCATCCGATCCATAT
TACTTGTCGCTGCTTTACTAGAAATTGTACTAAAGCAGCGACAAGTAATATGGATCGGAGGGAGTACTCAAATTGTTTCT
CTAGCATACTTCTCATTTA----AGGAAACTAACCAACTTTCTTTGAAACACTTGCTTGATGTGCGAGTTGATCAGTAAT
AATATTAAGGTGCTAATTACTGTTGACAACCTGGTGTTACTGCTGAGGATTACTGAGGTCAGGCTTTGCAACTCAGACTT
GTATTCCTACAGCATCAGAAGCTTGAAACACTTGTCTCCCTTCTTATTGCATGACAAGCTAGCAGTTTCCTTTACACAAT
GGTTCCTATATATGACATATCTGCTCATTCTGCTGTTTAGATTGGAGTTCTGCATGATGCATTATTTTTC-TTTGGCTGC
CTTTTCTTTCTTTTTATTTTGTATTATTGAGTGGTGGACATGCTTAGGATGAGGAAATATAGATTTACACTTGCTATTTT
CTTATGTGGTACATGTATGCACTTGCTTA--TTATCTAGGATGTGTTCAAACCCCAAATAATCTGTTTTAGGCGATTAAA
GCATGATCGAATGTTACCTCTTTGATTGGAGTACTGCTGGCGCACATTCTAGCGTGCTAATGCTAACCTTGTGAAGACTG
TTGTCATTCCACTACACCATGTTGGATAAGCTGGACACTGGAGAGATTCATTTTGCATGTTAATAAACTTTTGAATTTGT
CTCAGAACAGTCCAAAGCTGCTCAACATGGCTTGCTTTTATTTGCTAGCTGGATCTGATTGTCACACTAACAGTGCTCAT
AAACACGCTGTCGACTGGTTATAGATGTGCTTAATATTCTGTCGGCGACTGAACTTTCGAGCTTTCAGTATGGCA-ACCC
TTACTCTGT----------------
>chr3A_4
---TCGGTGAAGAATTGCGGCGATCCCCTGCACCCCCACCCCTAAAGATAGAT-AATGGGGCAATGGCTCCCCT---TAA
---GATAGATAGTGGGGCAATGGCTTCATACTAAGATAGACAGTG-----------------------------------
-------------------------------AGGCACCTGAGATATAGCAAAACCGAAAAGATAAAAAAAAACCATAACC
GTTGAACT------------------------------------------------------------------------
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--------------------------------------------TGCCTGTTTTTTAGCGGTACTT-ACTTACCTGGTGG
TAATGGGACTTTTCCATGCTGTCAAAAAATG---------------------GGACATTTTCCAAGAGCAACTAGTTAAC
GAGCGCTTCTTCAGGAGCTTCGCAACGATCAGCGGCACTTAGCACGCTCTCAGCCATTCATCACGTGTCGCGTTCTGGGC
GCTTCCTCCGGATTGTTTTTTCGCACGCGTTTTCGGATTTTTAAATGGTTTTTTGGGTTTTTTCGACGTTTTGGTTTTCC
ACTGGTCTTTCTTAGCTTTTCAATCAAAAAAATTGAAAAAAATATTTTGCGCGAA-------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------AAACG
CGTTTTCTTTTTTTCCTTTCATGAGAGTCACGGTTTTGCTTCCGCGAGAGGTACGGTTTTGCTTTCGCGAGAGTCACGGT
CGTTCCTCTCGAAAACGAAAAAAACGTGTTTTTTGTTTTTTTTTCTTTCGCGAGAGTCACGGCCGTGCCTCTTGGAAACG
GGACAAAAACGCGTTTTCTGTTTTTTTTCTTTCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAAAAAACATGTTTTCTATTTATTTTTCTTTCGCGAGAGTCACGGTTTTGCTTCCGCAAGAGTCATGGTTGTGCTTTCA
TGAGAGTCACGACCGTGTCTCTCGGAAACGGGAAAAACCACGTTTTCTGTTTTTTTTCGCGAGAGTCACGGTTTTGCTTC
CGCGAGAAGCATGGTTGTGTTTTCGTGAGAGTCACGGCCGTGCCTCTCGGAAAGGAAAAAAACGTGTTTTCTGTTTTTTT
CGTGAGAGTCATGGTTTTGCTTCCGCAAGAGTCACGGTTGTGCTTTCACGAGAGTCACGGCCATGCCTCCTCGAAAATGA
AAAAAACACGTTTTCTCTTTTTTTTCTTCCGCGGGAGTCATGGTTTTGCTTCCGCGAGAGGCACAGTTGTGATTTCATGA
GAGGCACGGACGTGCCTCTTTTGGAAAGGGAACAAACCCGTGCTCCCGGTTTGTTTTTTTCGTGAAAAAAAATCCGTCAA
AACCTATCAACATGAGATCTAGTTTTGAAGATCTCGATGTGAGTAATCCAACGGTGTAAGTGATTCAAGATTTGGATACA
CGGTTTAAGAGATAAAACGTTTCAAATAAATGGATCTACGAAAAAAGAAAAAACTTTCAGGTTGCGACAAGTGGCGCGCT
GCATGTGCGCTACTTGTCGCAACTAGTGGAATTGGAGTGATCTTTGCAACGAGTATTCCTTAAGGCTGGTCATAGTGAAG
AGTAACTTAGAACACGCATATGTTACTACCTTCCTAATGGGTACTGTCATATGTGTAGTAACATAGATATCTTCATTTAT
TGTTTAGACTCATTTTGCATTGGGGGGCGCTATGTGATGGTAACATATTATGTTACTCTATTTGCCTCTCTCCTCATTAA
CTATTTGCCACCTTATCATTTTTGTTTATGTGGCACTTAAGTTACTCTCTATGTTATTCCCACTATGACCAGCCTGATTA
GTGATTTCGACATTTGCCATGATCTTTTAGGGAGAGACATTTTCATGAGTTGGGTCGCATTTGAGCAACGCCAGGCC-TT
GACCCATCACGAAGCAGGCCCATTTCCACCTCCACGCC--CACTCTGCTGCCGCCCTCTT---------CTCCCCTCCCG
GCGCGTTCCTTCCTGTAAAACCTCCTCCCGACCTCCATGGGCGCCCCACGGTAGCGCCACCCCACCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCTCTGGGCTCCCCAAGGTGCGGCCTCTCCGGATTCGCCCCCTCCC
CTCCCCCCCTCCGGTCA---GGTGAACCCCGTCGGCTTGTTGT-CGCA-------------CTGCAACCGCAAATGGTTT
CTGAATTTTCTGCGCCGCATCGTCACAGACACATATGTGTTGATACGCTATCT---------------------------
------------------AGTTAAACCTACTGACCGGAGCTCTAGGATGTAGGGACTGCACGCCCCGCGCT-----TGTG
CTAAATTTGC---GCATGCTTGGTTCTGCTGTATGACTCGAGGTT-----GAGAAGAGATGCTGTCAGTGTC-----TCT
GTACAGGGCCTGAAGATAAATCAATACTATGCTTGTTTTCCTAGAAAGACAGATGAGATCAATATGATTACCAATTTGCA
GATGAGAATTG-GATAACACATAACCTGAGA------TGCTGAAATGGACATCTCACACAGATGATTTCTCAGGCAGTCA
AGTGTCCTAATAT-GATAACCGGTTTCAGACATTTTGTAATTTCTGTATCCGTGAATTGCCTGATGCACTTAGTGCATAT
TATAGCTTCTAAGCTGTATTCTGACTTGCAGTG----TTTGTATATGGGAAGTACTCCCTCCGTTTGGAAATAACTAGCG
TGGTTTTAGTTCAGTTTGAACTAACTAAAACCACGTTAGTTATTTCCGAACGGAGGGAGTAACATGCATCTTCATCATAT
AAAAGCATGGGAGTACTATGTTGCCATCCTTTTA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GTCAGTGTCTCTGTATAGATCTGAAGATAAAACAATACTGTGCTTATTTCCCGAGACAGACAGATGAGACAGAT
ATGATTCCCATGTTGCAGATGTGAATTACATAGTGCATAACCTGAGAACCTAGTGCTGAAATGTACATCACACAGATGAT
CTTTCAGCAATCAAATGCTCTCATACAATACCCGGTTTCAGATA-TTTTTTAATTTCTGTGTCCGTGAATTACCTGATGC
ACTT--TGCATATTATATCGTATAAACTATATTCTGACTTGCAGTGTTTTTGTATGGGAAGTAATATGCATCTTCATCAT
ATAAAGTCATGAGAGTACGAGGCTGCCATCC-TTTTAGTCAATGCTTATGGTGTTATTCCTAATGTTTCCAGTGATTTTA
TATCTTTTTCACTTATTGTATGGAAGATATGCCTGGTATGGTGCTACA----ATAACTAGTGGTGGATGATCTAATAG--
--GTCCACTTGGTGACATTCTTCATGTCGATGAATTACTTTTGTACAAAATCCATG-CCGAGTACAATTGTGTGCCTGCA
AACGAAAT-TATACTGAAAGGCCTTATATTTTGTCCAGGATCACGGTTCTTTGCTGATGATCGCTCACACTACGATCTGT
TTGGTAAAAGAAGGCCAGGTGATGAAGAGTTCAGGAAAGCTTGGCAGGAGAATGTTGACGAGGAGGACTGCCTATGGACT
GCCAGTGAAGACGAGGATGAGGAGAAGGAGAATGATACAAAAATGGAGAGGGAAATCAAGAAAGTGAAGAAGCAAGCCAA
GGAAAATGCTAACCTCATTGATGGTGATGACAGTGACGAGTTAAGAAGTATATGCCCTGAGAGCGATGAAGACGATATGA
ATCTCTGGAGTGGCAGTGAAGAAGACGATGACAATGATATCCCTACTGAGCCACATCCCAATGAACGCAGTGATTCATAT
ATAGATAAGGTGTTTGAATTTGATGAGACACCTAAATACCGCACAATCTCTGAGCTGTTGAAAGCCGAGAAGGAACCACC
AGAACTCTCGCCGGGAAAGCAAGCAAGAAAACTTGCTGTAGAAAATGCTCTCAAGAAGTTGAAAAAAGGGCCTGACGGAC
GCTACATTAACGTATTTGATGTTGTCACTGATATAGATATCCTGATTGGAGCATTTGAGAACATTGTTTCAGGACCAGAG
TATGCAGAGCTGCGGGAGGGCGGACCAAAGAAGCTCAATATCCAGTTCTTCAAGGATATACAAGCACGCATGAGAGACCC
AAATTTCAATTTTTCTCCAGAGTTAAAGTTAAAGCCTAAGAGTAAGTTAGTGCCTAAGAAGAAATGGCAGAAAGCACAAT
CAAGGAAGAGGAAAAATGACAAACGTTGAGCTGGAGAAAGTCGACAGTAATGTATTTCTCTTCCAGAATGCTCTCTTCAA
ACGGTGGTCAAGTTATCTGTAGTGTTGTGATCTACAATGAATATCTTCTGTAACATGACAGAAGTACTTAAGAAAAGTAC
CTCTGTCCATATCATTTCAATGTATGTTCTGTTTGCCAAGCAAATGGGGTCCGAATTCAGTAATCTATTTTAATTCAGCA
AGCTGGGACGTGATTCTATCCGTTTACACTGTAAATGACTTGCAGCTAGGTGGAAATGATGTA-----------------
------------------------------------------------------------------CTCAAATTGTTGCT
CTAGCATGCTTCTCTTTTATCTAAGGAAACTAATCAAATTCCTTTGAAATACTTGCTTGATGTGCGAGTGGATTGGTAAT
ATT----AGATGCTAATTACTGTTGACAACCTGGTGTTGCTGCTAAGTATTACTGAGGTCAGACTTTCCAACTCAGACTT
GTGTTCCTACAGCATCAGAAGCTTGAAACACTTGTCTCCCTTCTTATTGCATGACTAGCTAT-AGTTTCCTTTACACAAT
GGTTCCTATATACGACATATAGGCCCATTCCGCTGTTTAGATTGGAGTTATGCATGATGCATTATGTTTC-TTTGGCTGT
CTTTTCTTCCTTTTTTTGTAT--TTATTGAGTGGTGGACATGCTTGGGATGAGGAAATGTAGATTTACACTTGCTGTTTT
CTTACATGGTACACCTATGCTCTTGATTATTTTATCTGCGCTATGTTCAAACTCCAAATAATCTGTTTTAGGTGATTAAA
GTATGATCGAATGTTACCTCTTTGGTTGGAGTACTGCTGGCGCACATTCTAGCGTGCTAATGCTAACCTTGTGCAGACTG
TTGTCATTCCACTACACTATGTTTGATAGGCTGGACACTGGAGAGATTCAGTTTGCATGTTAAAAAACT--TGAATCTGT
TCCAGAACAGTCCAAAGCTGCTCAACCTGGCTTGCTTTTATTTGCTAGCTGGATCAGATTGTCACACTAACCATGCTCAT
AAACTCGCTGTCCACTGGCTATAGATGTGCATAGTATTCTGTCGGCGACTGAACTTTGGAGCTTTCAGTATGCCACCCCC
TTACTCTGTACTATCTAC-------
>SNPs
S----S------------------------SS------S-----------------------------------------
SSS------S----S--------------------------------SSS-S---------------S------------
-S-----------S---S---------S-S-----SS--S--------------------SSSS----------------
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------SSSS-SSSSSS-----------S-
---------------------------------------------S----SS----------SS----------------
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----------------------------------S-S-------------------------------------------
--S-------------------------------S--------------S--------------------------S---
------------------------------------------------------------------S-SSS---------
---------------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S------S---------------------------------------------------------------
---------------------------------S---S------------------S-SS--------------S-----
-----S-----S----SSSS-S----S--S-SS----S------S---SSSSSSSSSSSSS---------------S---
-------SS--S-----------S---------------------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS-----------S---S-S-----------------S-----S--S-SS----SSSSSS----
----------SSS---------S----S-----------------------S--------S----------SSSSSS---
--------SS---------S--------------S---S--S------S----------S--------------S-----
----------SS-------------------SSSSSS-----S-----S----S--S-S-SSSSSS---S----------
-S------S---S-S---SSS--S----S-SSS---S----------S--S----S--------S------SS-SS----
S---SS------S------S----S-S-S--S-SSSS---------S------------S-----SS-S-----------
--------------------------------------------------------------------------------
--------------S----S-----------S--S-S-S--------------S-S-S--SS-S----------------
--S-----S-----------S----S--S-----S----------SS----S------S--S------------S-SSSS
SSSSSS-SSSSS-SS-S--SSSSSSS-S-SSS-SSSS-SSSSSSSS-SSSSSSSS--SS-SSSSSS-S-S--SS--S-SS
SS-SSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S-S------S
--S-SS--------------SS------S-S-S-----S----S-S-S--------S------SSSSSSSSSSSSSSSSS
SS----------------------------------SS--S---------------SSSSS-SSSSS--------S----
-----SSS--S---------SS-----SS---S-------------------S----------S-----------S----
-----------------S----SSSS---------------------S--S-------------SS--S-----------
----SS----------S---------S----------------SSS-----S-S----------S---------------
------------------S------S-----S--------S---------S-S---S---SS-SSS--------------
-------------------------S---------S-----------SSSS------S------S------S--------
S---S----S----------S----S---------S------S-------------------------------------
--S--S--S---------------------S--------------------------------S----------------
----------------------------------------S--------------------------S------------
-----------S--------------S--------------------SS-------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-----------------------------------------------------------S--------------
---------S--------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
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------------------------------------------S------S------------------------------
-----------------S--S--S--S-----------------------------------------------------
---------------------------------------------------------S----------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S------------------------------S-------------------------S--SS---------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----S-----------------------------------------S---------------------------------
------------S-----SSSSSSS
>forward_466
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----------------------------------------------TCAAGGAAGAAGACGCGCTT--------------
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>reverse_4761
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----------------------------------------TGGTCTGAGCTCTAGGCAGT--------------------
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>forward_4137
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-------------------------------------TGCTGGAATGGGCATCACAT-----------------------
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>reverse_5588
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-------------------------------------------------------------------TTGCCTATGGACT
GCCAGTG-------------------------------------------------------------------------
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>forward_4780
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----------------------------------------TGGTCTGAGCTCTAGGCAGT--------------------
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>reverse_5906
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-----------------------------------------------------------------TGAGAAGGAACCACC
AGAGC---------------------------------------------------------------------------
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>forward_4800
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------------------------------------------------------------AGAAACTGCATGCCCTACGG
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>reverse_6698
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---------------------------------------------------------CGATGTGCGAGTTGATCAGT---
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-------------------------
