>input_sequence_27322
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----------------------------------------------------------------------ATGTCTCCGC
TCGCCGACCTTCTCAGCCTCGACCTGTCCGGCTGCACCGGCAAGATCATCGCCGAGTACATATGGTAAGACCGCTCTGCT
TCCTCATCCTCCCTCTTCCTCAGCACTGTCCCAAC-TCCCATCTCACCTTCCTTCCGAACAAAATAATCCACTTCATCCA
TTCTTGCTGGTTCTTGTAATCTCAATTTTTAGTCCAGTAAAAACCCTTCTCTTCTTGTTTTTTCCAAGTCAGGCAGGCAG
GCCACAGATATTTTTTTTCCTCCCCATAAATCCCATCTGACGTTCCTTTCTAGTTTAGTTTACTGGAATATATCATCGAA
AAAAAAAAGTTTACATGAATATATACTAGTGTGTTTCTCTTCTTTTTTTTGCGAAACGTACTAGTGCGTTTCTCAAATTT
-GAGTCCAGTAAAAAACCCTTTTCTTCTTGTTTTTTACGCCT------TGATCTGTTGCCAATATGATGTTTTTTTTATT
TTTTATTTTTTCTTTGGCAGACCGTTGACCCTGTGCATCTTAGCTATGCGT--------TGCCGCTCATCATGATTTGTA
TTCGCCTCATTCT-------------------------------------------------------------------
------------------------AGTACATTATAAGTCAACAAAATGGGAAAATCGGCATCGTACTTTTAGGCCTTATT
ACTAACCTACTTCCATATAAAT-----CTTGCCTAATCCAGGGTCGGCGGCACAGGGATGGACGTCAGGAGCAAAGCCAG
GGTAAGCCTGCCTAACCCTCAATGACTCGTAGCTTTGCCGGCCGACTCCGTTTTGTCTAGCTGTGACTGTGACGGCACTG
CAAGTATGATATGTTCCTAACACTTCTTGTGACCCTTTTTGACGCCTTGGATATTCACAATCAGACGCTGCCCGGGCCCG
TGGAGGACCCCAGCAAGCTTCCAAAATGGAATTTTGACGGCTCCAGCACCGGCCAAGCCACGGGTGACGACAGCGAAGTC
ATCCTCTGGTAAGCCCTTGACTGCACCCTTCAGTTAAC---CATGCCTTGGCTTGCGTGCCATGAGGCTGAGCTAATCTG
AATTTCATGTGTTGCTCCTGCCAAGCCCTCAAGCCATCTTCAAGGACCCATTCAGGAGGGGGAACAACATCCTGGTA---
-AGATCAAAGATCCT----CCTCTTTCTTTTTTCATGAATACCAGATTGTTGTTCCACCTACAGTAATTTTTGTATTGTT
GTGGCATCTGGCATGGATCTTTGTATTGTTGTTTATTTGTGTAAATGATTTCTCAAAT-TTGTTCATGAATACCAGATTT
TTTTAACATGA---TTTTTAACCT---TGTGTAGGTCATCTGTGACTGCTATGCGCCTAACGGAGAGCCGATTCCGAGCA
ACAAGCGGTACAACGCGGCGAGGATATTCGGCCATCCTGATGTCAAGGCTGAAGAACCATGGTCAGTATATA-TCAGCTG
CTCTCTCCTATAGAAATTAGTCGACTACTTTGATTTTTGCACATAATTTAATTTAGGTGGCAATTAATCTTGTGCGCCCC
TCTTGTGTTGCCTGAAATGTAAGGTATGGGATTGAGCAAGAGTACACCCTTCTTCAGAAGGACACCAACTGGCCCATTGG
CTGGCCACTAGGGGGTTACCCTGGTCCTCAGGTAACTTAACTAGACATGTTGCATATTGCAGCACTCTTATT------AA
GTCTTAGCCAAGATCACTCCACTAAGTAAGGGAGGAAACTTGGCTGTAAATGATGT--TAGCTTAGCACTAACTGATAAC
AGTTCAAAAATGCTGGGCTGATGGTGACACTGACAGAGCAAAATGTGTGTGACAGGGACCTTACTACTGCGCCGCGGGTG
CGGAGAAATCTTACGGGCGCGACATCGTCGACGCGCACTACAAGGCCTGCCTCTACGCCGGCATCAACATCGGCGGCATC
AATGCAGAAGTCATGCCAGGACAGGTAGTTTCAGGCGCAGAAATACCTTCCCCTT-----------TTCCTATCAAAATT
GTTCATGGCCTGATTTCTGTCTGA----ACCAGTGGGAGTTCCAAGTCGGCCCTTCCGTCGGCATCTCGGCCGGCGACGA
GCTCTGGGCGGCTCGCTACATCCTGGAGGTAAATATAA--ACTGCCTCACCTAGCTGAATGAATCAAATCAAATGCAGCT
TTTGCTGATAAGAACATTTTTTGCTTTGTGTAACCCAACAGAGGATCACTGAGATTGCCGGTGTCGTCGTCTCCTTCGAC
CCCAAACCGATCCCGGTGAGCAT------TTCTTCTTCTTTTTGTGCCAGAAGTGT-ACCTTGATCTGC------ACTGA
CCAGCTAGTCATTTCT-------TACATGTGTGTGATTGCAGGGAGAGTGGAATGGTGCTGGTGCCCACACAAACTACAG
GTAAGATATAACGAGCAAGCGAACGAATGCATCGCCGTCTAG-----TCTAGTCTTGTGTTATGAGTTATGACATGTTCC
TGCTGTGGTTTTCTGGATGCAGCACCAAGTCGATGAGGAGCGAGGGTGGGTACGAGGTGATCAAGAAGGCGATCCAGAAG
CTGGAGGCGCGGCACATGGAGCACATCGCCGCCTACGGGGAGGGCAACGAGCGCCGGCTCACCGGCCGCCACGAGACCGC
CGACATCAACACCTTCGTATGGGTAAGCAAGACTGAAGGCCTAGAAGCCCAACAGCTTCAGACTC----CAGAGTCACTC
ACGCACTGACTGA------------------CTGCCTTGTTTGTTTTC------CAGGGCGTGGCGAACCGCGGCGCGTC
GGTGCGGGTGGGCCGCGACACCGAGAAGGAAGGCAAGGGCTACTTCGAGGACCGGAGGCCGGCATCCAACATGGATCCCT
ACGTCGTCACCTCCATGATCGCCGAGACCACCATCCTCAGCAAGGCCGGTCTCTCCAATGGCAAGTAG------------
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>chr4D_1_TraesCS4D01G047400
TGTGTGGGCGGAGTGTGTCAGATGCCTACGTGGTGGCTATCCGGAGGTCCGCAAACCTCCTC---ATGTATGCTTCCGGT
TTATGGGAATTCAGGCGGTCAAACCGATTCAC---------A--------------------------------------
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------------------AACCTTTGATATATGACATTGAATGACACAAAATATCCGGATCCTAGACTTTTGGCGACG-T
TTTGATGATGAAGG--GCGTTGGAGATGCCCTAAGGGTATGC-------TAGAGTTGGCTGTCCATATCATCACGGACTC
GTTAGGTGAATGTATTTTGTCGTCCACGAGGTAA----------------------------------------------
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-------------------------------------CGATGGCACGAGAGGAATGACACGACAGGCACAAAAGTATAGC
TACTCATGTCCGAAACCATATGCCTCGAAGTCATGGTCAGGTTTGCTACTGCGATGGTCACTGAGTAGCACAGTAGTCAC
TTTCCTACACA-----TCCTGCAGGTGCCACTCACGTCTCACTCACGACACCATCTAACTTTGACCGATCGGGAAGATCC
GTCAGGTCAGTCAGTCCACTGGGATTCGCACGGATCGGACGCCGGGACAAGAGAACGTGAATTTGCCCTTCACCACTT--
-------------------------TTCATGCATAAGCAAAGGACCCG-------TAGCCATAGCCAATTTCTCCTTCCC
CGACCGAGCGAATGACACTTTTTAATTAAGTAAACTCGCACAACAGAAGAGCTGGTG------GTGGTGTGCGGATCAGC
GAAGCGCGG-----TTGTCCGTACGCATGG-------------------------------CGTCCCGTGTACAGTAGAA
AAGGTGTTCCGTGCGCGCAGGCCGCGGAAACGTACGCACGCAAGGACAGCCGTACGTACCAGCCGCCCCGGATCCGTTTC
CGTTTCCCCCCGCCCGCAAAGCCCACCAACCTTTCGGGGCCTCCTCCC-CGTCGCCACGCTACTTATAGAGGGGCAGAGC
CAGCTACGGCGACACACTCGACCCGACTCCTCTGCCCCGCATTTCCAAGAACACCTCTCCCTTCCCTTGCTCTG-----C
CCTCTCCATCTCCATCTCCGGCTCCGG---------------GAAGAAGAAGAAGAGGTA-------GCCATGTCTCCGC
TCGCCGACCTTCTCAGCCTCGACCTGTCCGGCTGCACCGGCAAGATCATCGCCGAGTACATATGGTAAGACCGCTCTGCT
TCCTCATCCTCCCTCTTCCTCAGCACTGTCCCAAC-TCCCATCTCACCTTCCTTCCGAACAAAATAATCCACTTCATCCA
TTCTTGCTGGTTCTTGTAATCTCAATTTTTAGTCCAGTAAAAACCCTTCTCTTCTTGTTTTTTCCAAGTCAGGCAGGCAG
GCCACAGATATTTTTTTTCCTCCCCATAAATCCCATCTGACGTTCCTTTCTAGTTTAGTTTACTGGAATATATCATCGAA
AAAAAAAAGTTTACATGAATATATACTAGTGTGTTTCTCTTCTTTTTTTTGCGAAACGTACTAGTGCGTTTCTCAAATTT
-GAGTCCAGTAAAAAACCCTTTTCTTCTTGTTTTTTACGCCT------TGATCTGTTGCCAATATGATGTTTTTTTTATT
TTTTATTTTTTCTTTGGCAGACCGTTGACCCTGTGCATCTTAGCTATGCGT--------TGCCGCTCATCATGATTTGTA
TTCGCCTCATTCT-------------------------------------------------------------------
------------------------AGTACATTATAAGTCAACAAAATGGGAAAATCGGCATCGTACTTTTAGGCCTTATT
ACTAACCTACTTCCATATAAAT-----CTTGCCTAATCCAGGGTCGGCGGCACAGGGATGGACGTCAGGAGCAAAGCCAG
GGTAAGCCTGCCTAACCCTCAATGACTCGTAGCTTTGCCGGCCGACTCCGTTTTGTCTAGCTGTGACTGTGACGGCACTG
CAAGTATGATATGTTCCTAACACTTCTTGTGACCCTTTTTGACGCCTTGGATATTCACAATCAGACGCTGCCCGGGCCCG
TGGAGGACCCCAGCAAGCTTCCAAAATGGAATTTTGACGGCTCCAGCACCGGCCAAGCCACGGGTGACGACAGCGAAGTC
ATCCTCTGGTAAGCCCTTGACTGCACCCTTCAGTTAAC---CATGCCTTGGCTTGCGTGCCATGAGGCTGAGCTAATCTG
AATTTCATGTGTTGCTCCTGCCAAGCCCTCAAGCCATCTTCAAGGACCCATTCAGGAGGGGGAACAACATCCTGGTA---
-AGATCAAAGATCCT----CCTCTTTCTTTTTTCATGAATACCAGATTGTTGTTCCACCTACAGTAATTTTTGTATTGTT
GTGGCATCTGGCATGGATCTTTGTATTGTTGTTTATTTGTGTAAATGATTTCTCAAAT-TTGTTCATGAATACCAGATTT
TTTTAACATGA---TTTTTAACCT---TGTGTAGGTCATCTGTGACTGCTATGCGCCTAACGGAGAGCCGATTCCGAGCA
ACAAGCGGTACAACGCGGCGAGGATATTCGGCCATCCTGATGTCAAGGCTGAAGAACCATGGTCAGTATATA-TCAGCTG
CTCTCTCCTATAGAAATTAGTCGACTACTTTGATTTTTGCACATAATTTAATTTAGGTGGCAATTAATCTTGTGCGCCCC
TCTTGTGTTGCCTGAAATGTAAGGTATGGGATTGAGCAAGAGTACACCCTTCTTCAGAAGGACACCAACTGGCCCATTGG
CTGGCCACTAGGGGGTTACCCTGGTCCTCAGGTAACTTAACTAGACATGTTGCATATTGCAGCACTCTTATT------AA
GTCTTAGCCAAGATCACTCCACTAAGTAAGGGAGGAAACTTGGCTGTAAATGATGT--TAGCTTAGCACTAACTGATAAC
AGTTCAAAAATGCTGGGCTGATGGTGACACTGACAGAGCAAAATGTGTGTGACAGGGACCTTACTACTGCGCCGCGGGTG
CGGAGAAATCTTACGGGCGCGACATCGTCGACGCGCACTACAAGGCCTGCCTCTACGCCGGCATCAACATCGGCGGCATC
AATGCAGAAGTCATGCCAGGACAGGTAGTTTCAGGCGCAGAAATACCTTCCCCTT-----------TTCCTATCAAAATT
GTTCATGGCCTGATTTCTGTCTGA----ACCAGTGGGAGTTCCAAGTCGGCCCTTCCGTCGGCATCTCGGCCGGCGACGA
GCTCTGGGCGGCTCGCTACATCCTGGAGGTAAATATAA--ACTGCCTCACCTAGCTGAATGAATCAAATCAAATGCAGCT
TTTGCTGATAAGAACATTTTTTGCTTTGTGTAACCCAACAGAGGATCACTGAGATTGCCGGTGTCGTCGTCTCCTTCGAC
CCCAAACCGATCCCGGTGAGCAT------TTCTTCTTCTTTTTGTGCCAGAAGTGT-ACCTTGATCTGC------ACTGA
CCAGCTAGTCATTTCT-------TACATGTGTGTGATTGCAGGGAGAGTGGAATGGTGCTGGTGCCCACACAAACTACAG
GTAAGATATAACGAGCAAGCGAACGAATGCATCGCCGTCTAG-----TCTAGTCTTGTGTTATGAGTTATGACATGTTCC
TGCTGTGGTTTTCTGGATGCAGCACCAAGTCGATGAGGAGCGAGGGTGGGTACGAGGTGATCAAGAAGGCGATCCAGAAG
CTGGAGGCGCGGCACATGGAGCACATCGCCGCCTACGGGGAGGGCAACGAGCGCCGGCTCACCGGCCGCCACGAGACCGC
CGACATCAACACCTTCGTATGGGTAAGCAAGACTGAAGGCCTAGAAGCCCAACAGCTTCAGACTC----CAGAGTCACTC
ACGCACTGACTGA------------------CTGCCTTGTTTGTTTTC------CAGGGCGTGGCGAACCGCGGCGCGTC
GGTGCGGGTGGGCCGCGACACCGAGAAGGAAGGCAAGGGCTACTTCGAGGACCGGAGGCCGGCATCCAACATGGATCCCT
ACGTCGTCACCTCCATGATCGCCGAGACCACCATCCTCAGCAAGGCCGGTCTCTCCAATGGCAAGTAGAGTGG--CTTTG
ATGGGTTCTGTTATCTGTGTGAGTGCCCGTGGTTGCGCATGTGTGTGTGTGTGTGTGTCTGTG----------TGATCTG
CATTGCAGTGACAAGACTGGCAGGGTTTGAATAATGATGATAAAGCAATAAC-----ATGTAATG--------TGCTTGT
CCTAGCTGGATGTATGTTCCTCGTCCTGAACTTGTTTGTGGTCTGCAAACATCTCGTGTTATATAAGCGTGGGTTATGTT
CATGGCACTAGGTTTGGCCGGGAAAGAGTCTCATCAATCACCCCCTACCTCTGCGTCAATCGTTGCCATAGGGTAATTCA
ACAAAAAAGAAAAGAAACTCAAAACTGTTGTCGTTGCAATGTCGCATTGCGAAGGATAAACTGAAGAAATCATTTGGTTT
ACTCCTAAATTTCGATGGAGTAGCCCATTCCATAGGGAATTTTGAAGGAAAGGAAGATAGTGATGTAAAATGTACTGCAG
CTCTCGGGTACCACACTCTCCTATATGAAAATAGCATTAAAAAGCATATCAGCAACTTTCAAAAAAATCTGAAATTCTGA
GATATGAAACCTAAGTGCAGGTTGTACACCCGTGTTCATATTCACGGGGAATGGTTGCTTGTGATATCTGCGGCGCACGA
ACTACGGTCCAACATATGTTACATTCAGGGTTTTTTCTATACATGCAATTTCTTTGTCTTTTTTACTAGCATTACCACGG
GCATCCATTTCCCACGAAACTGAACACACGAGTACAACAATCAACCAAGTTTCATATCTCAAAATTTCAGAAATTTAATA
TGTTTTTTAATGCTATTTTCATATAGGGTGTGTGACACGCAAGAGGATTTTTTATGTTATTTTCATATAGGGATATGTGA
CACCGAGAGGATTCTTAATGCTATTTTCATATAGGGGTGTGTGACACCCAAGAGCCACAAATCCTCATCCAGATAGTGAT
TCCGTTGAATGTTTCCTATACGAATGATATCCTTCAGAAATTCCTATGTTTTC
>chr4A_1
TGTGTGGGCCAGGTGTGTCAGATGCTTGCGTGGTGGTTGTCCGGAGGTCCGCAAACCTCCTCCTCATGTATGCTTACGGT
TTATGGGAATTCGGACGGCCAACCCGATTCACGAGCCGACGA--------------------------------------
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------------------ACCCTTTGATGTATGACATCGGATGACACAAAGAATCCGAACCCTAGACGTTTGGCAGCATT
TTTGATGATGAAGG--GCGTTGGAGACGCCCTAAGCGTCTGC-------TAGAGTTGGCTGTGCATTTCCTCATGAACTC
GTTAGGTGAATGTATTTTGTCGTCCACGAGATAATGATAGGCACGGTGGGTATAAA------------------------
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--------------------------------------AGATTTGCTACTAGCGTGTTCAGGAAGTTGCACGGTGGTCGC
TTTCCTACATA-----TCTTGCCGGTGTCACTCACGTCTCACTCATGTCACCATCTAACTTTGACCCCTCGGGAAGATCC
GTCGGGTCAGTCAGTCCACTGGGATCTGCACTGCACGGACGCTGGGACAAGAGAACGTGAATTTGCCCTTCACCACC---
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-----------------------------------------------------------------GGTGTGCGGATCAGC
GAAGCGCGGCGCGCTTGTCCGTACGCATGGGATCGAATCGGATCACAGCGAAGCGCGCCGGCGTCCCGTGCACAGTGGAA
AAGGGGTGCCGTGCGCGCAGGCCGCGGAAACGTACGCACGCAAGGACAGCCGTACGTACCAG------------------
---------CCGCCCGCAACGCCCACCAACCTTTCGGGGGCAGGGGCT-CGTCGCCACGCTACTTATAGAGGGGCAG---
----------GGCACCACTCGGCTCGCTCCTCTGTCCCGCATTCCCAACAACACCTCTCCCTCCGCTTGCTCTG-----C
CCTCTCCATCACCGCCTCCATCTCCGGCGA---CCGGGGGAAGAAGAAGAAGAAGTAGCA-------GCCATGTCTCCGC
TCGCTGAGCTTCTCAGCCTCGACCTGTCCGGCTGCACCGGCAAGATCATCGCCGAGTACATATGGTAACATCGCTCTG--
--------CTCCCTCTTCCTCAGCACTGTCCCAACCTCCCATCTCATCTTCCTTCCA-----------------------
----------------------------------------------------------------------AGTTAGGCAG
GCCACAGAT--TTTTTGTCCTCCCCACAAATCCCATCTGACGTTTCTTT-------AGTTTAGTT---------------
----------------------------------------------------------TACTAGTGGGTTTCTCAAATTT
-GAGCCCGGTAAAAACCCTTCTCGTC-----TTGTTTTTACTCCTTGATGATCTGTTGCCAATATGGTGTTTTTCTTTTT
T----------CTTTGTTAGACGTTTGGCTCTATGCATCTTAGCTATGCGTTGGCCGGGTGCCGCTCATCATGATATATA
CCTGCATGATGCTGGTACTTTCTCTGTAAAAAAAATATAAG------------------------------ACGCTCTTA
TATTTCTCTATGAAT-------GGAGTACATCATAAGTTAATAAAATGGGAAAATCGGCATCGTACTTTTAGGCCTTAAT
ACTGGTCTACTTCTATTTACACCTTGCCTTGCCTAATTCAGGGTCGGCGGCACCGGGATGGACGTCAGGAGCAAAGCCAG
GGTAAGCCT----AACCCTCGACGACTCATAACTTTGCCGGCCGGCTCCTTTTTGTCC-AG-----CTGTGACGGCACTG
CAAATATGTTCCTAAT-TAACACTTCTTGTGACCC-TTTTGATGCCTTGGATATTCACAATCAGACGCTGCCCGGACCCG
TCGATGACCCCAGCAAGCTTCCAAAATGGAATTTTGACGGCTCCAGCACCGGCCAAGCCACGGGTGACGACAGCGAGGTC
ATCCTCTGGTAAGCCCTTGACTGCACCCTTCAGTTAACCC---TGCCTTGGCTTGCGTGCCTTGAGGCTGAGCTGATCTG
AATTTCATGTGTTGCTTCTCCCAAGCCCTCAGGCCATCTTCAGGGACCCGTTCAGGAAGGGGAACAACATCCTGGTA---
-AGAATGATCAAGATCTTCCCTTTTTTTTTACTCATGGGTTTCGTATCGTTGTT--------------------------
----------------------------TTGTTTATTTGTGTGAATGAATTTTGAAAA-TTGTTCATGAATGCTTTTTCA
CCTGTGGTAAATTGTTTTTAACCT---CGTTTAGGTCATCTGTGACTGCTATGCGCCTAACGGAGAGCCGATTCCGAGCA
ACAAGCGGTACAACGCAGCGAGGATATTCGGCCACCCTGATGTCAAGGATGAAGAACCATGGTCAG----TA-TCAGTTG
CTCTGTTCTTTAGAAATTAGTCGACTGA-TTAATTTTTGCACATAATTTTATTTATGTGGCAATTAATCTTGTGACACCC
TCTTATGTTGCCTGAAATGTAAGGTATGGGATTGAGCAGGAGTACACCCTTCTTCAGAAGGACACCAACTGGCCCATTGG
CTGGCCACTAGGGGGTTACCCTGGCCCTCAGGTAACTTAACTAGACATGTTCCATACTGCAGCACTCTTATT------AA
GTCTTAACCAAGATCGCTCCCCTAAACAAGGGAGGAAACTTGGCTGTAAATGCTATTATAGCTTAGCACTTGCTGATAAC
AGTTCAAAAATGTTGGACCGATAGTGACACTGACAGAGCAAAATGTGTGTGACAGGGACCTTACTACTGCGCCGTGGGTG
CAGAGAAATCTTACGGGCGCGACATCGTCGACGCGCACTACAAGGCCTGCCTCTACGCCGGCATCAACATCGGCGGCATC
AATGCAGAAGTCATGCCAGGACAGGTAGTTTCAGGCGCAGGAATACCTTCACTTGGATGCCCCTTATTCCTATCAAAATT
GTTCATGGACTGATTTCTCTCTGAACCAACCAGTGGGAGTTCCAAGTTGGCCCTTCCGTCGGCATCTCTGCCGGCGACGA
GCTCTGGGCGGCTCGCTACATCCTGGAGGTAAATAAAACTACTGCCTCATCTAGTGAAATGAATCAAAT-----GCAACA
TTTTGTAATAAGAACAA-TTTTGTTTTGTGTAACCCAACAGAGGATCACTGAGATTGCTGGCGTCGTCGTCTCCTTCGAC
CCCAAACCGATCCCGGTGAGCATTTCTTCTTCTTCTTCTTCTTGTGCCAAAATTTC-AGCTCGATCTGCCGTTTCACTGG
CCAGC-AGCGATATGTAACTGTGTATATGTGTGTGACTGTAGGGAGAGTGGAATGGTGCTGGTGCCCACACAAACTACAG
GTAAGATACAGAGAGGAAGCCAAGGGATGCATCTCCGTCTGC-----TCTAGTCTTGTGTCATGGGTTATGACATGATCC
TGCCGATG---TCTGAATGCAGCACCAAGTCGATGAGGAGCGAGGGCGGGTACGAGGTGATCAAGAAGGCGATCCAGAAG
CTGGAGGCGCGGCACATGGACCACATCGCCGCCTACGGCGAGGGCAACGAACGCCGGCTCACCGGCCGCCACGAGACCGC
CGACATCAACACCTTCGTCTGGGTAAGCACGAAAGCCCCACGGGGAG---------TCCAGACTTCAGACAGAGTCACCA
CCATTGCTGCTCTTCTCTTACTGCTTTCCGGCTGCATTGTTTGTTTGTTTTT-GCAGGGCGTGGCGAACCGCGGCGCGTC
GGTGCGGGTGGGCCGCGACACCGACAAGGAAGGCAAGGGGTACTTCGAGGACCGGAGGCCGGGGTCCAACATGGATCCCT
ACGTCGTCACCTCCATGATCGCCGACACCACCATCCTCTGGAACGCCGGCCTCTCCAATGGCAGGTAGATGTCATCTTTG
ATGGGCTCTGTCTTCTGTGTGAGTGCCCGTGGTTG----TGTGTGTGTGTGCGCGCGCGCGTGTGAACTGCATTGCAGTG
ATG----------AGACCGGCAGGGTTTGAATAATAATGATAAAACAAATAACATCCGATGTGATGTGGTGTATGCTTGT
CGTAGCTGGATGTATGTAACTCGTCCTGAACTTGTGTGTGGTTTGCAAATATCTCGTG----------------------
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>chr4B_1
TGTGTGGGACGAGTGTGTCAGATGCCTACGTGGTGGCTGTCCGAAGGTTCGCAAACCTTCTCCAGCTATGCTT---CGGT
TTATGAGAATTCAAACGGTCAAACTGATTATTATTTTTGCGGGGGGGAGGGAATTCCATTGCTCAAGGAGGCCTCTCAGC
CACAACCAAGTTTACAAGAAAGTCCGGCCCTCCTGCGAACTAGACTGTCGTACAGGGGGTACTACGATAATTCTGCAGAC
GGTCAAGCTGATTCACAGACCCTTTGATGTATGACATTGGATGACACAAAGAATCCAGACCCTAGACGTTTGTCAGCA-T
TTTGATGATGAAGGGCGCGTTGGAGATGCCCTAAGGGTCTGCAGTCTACTAGAGTTGGTTGTCCATTTCCTAACGAACTC
GTTAGGTGAATGTATTTTGTCGTCCACGAGGTAAGAGCAACTCCAATGGGGCAACCCATTTCATCCGCATGCGTCCGTTT
GGGTCGGCGCGGACAAAAGTGCAGGCCCAACGCGGCGACCCAAACGCAAATCGCGTCCGCGCCGACCCATTTTCAGCCCA
AAATTGCGTCTAGAATGCGTCGGCACGGATGCGAAGCATACGCGCCGCGCGTCTCATCGGCGTCTGCCGCGTCCCCACCT
GTAGGCCACCCAATCGCCACCGGTCGTCATATTTATGACGACCACCGACAGCGGGCCCACTTGTCAGCCTCTGGAAGCTT
CCTTTTTTAAGCACGCGTGCGACGGGTGGGCGGCCTCATCCAGTTCTCCTGTCCACATCTAGCCCCCCACCACTCCCTTG
CTTCATCACCGGTGACAGGAAACCCTAGCCCGCCATGGGCTTCTTCGGCAACAATGACAAGGGCAAGGGCAAGTGCACCC
CCGGCATGTCGTCCTCCCGTGCTCCCCTCCCCCTCCTCCTCTGCCGGCGGCCCATTTACGCCCTGAACATCGGCACCTGC
ACATCCCGGTGCACCAAGCACGGTGGCATTGGGAGTACAGGCAGCCCCTCCCCTACCCTGACGTGACGCTGCCGCACCAT
TGGCACTTAGATCCCCAGCGGATCCCGGTGTCAGCGGTTCTGCGGAGCCAGCAGGCACACGACGACGAGGTGCACCAGCG
CCGCGCGCAGCTCACGCCGGAGCAGTGTCGGCTGCCTTGAGTACGTCGCCGACTCTCCCAACTGGGAGGCTTGGTTCGCC
CTCGAGCACGAGGAGCAACGGCGCTCGGGCGTCGACGCCGTCCCCACGTCGTTCCCGCTGCCGCCCTCGAGGAGGCCCTG
CAGCAGGCGCTGGAGGCTAGCCGCCTCAAGGAGGACGCGCGCTGGGATGGGCTGGAGCAAGCCCTCGCCCTGTTGGCGGC
GGGGGACTCCGTCCACACCCCGTTGTTCCAGCCGCCACCGCCACCGTCGCCGCCCATCCAGCCCAAGTCGTAGCCGAAGC
CGACGCGGAAGCGCTCCCCGTCTCCACCCACTTGGCCGGAGGAGGCCTACTCGGCCAGTACCGCGAGTGTGTGAGCGCGC
CCCCCGTCCACTTCGCCGCAACGCCGGAGCGGGAGGCCGCCCACCTCGAGCGCTGGAAGGCACACTGGCTCGCCAGGAGC
AGGCCGACGGCGAGCAGCAGATGCGCTACGAGGCCATGCTCCAGCGCGATGCGGAGGCGCTCCGGCTCAAGGAGGAGGAG
GAGGAGCGCGCGCGGCTAGCCGCAATGCCGCCGCCCCAGCAGACGCCGGAGGAGGTTGTCCTGGCAGCATACCCAGGCGG
CGTTCGGGTGGGTAGGCCCTGCTCCCGTCTTCATCGACCTCACCGGCGATGGCGACGGCAGCGGCGCCGCCAAGGGCAGC
GTGCGGGGCGGCAGAAGGCGGCGCAGTCTTTTTTCTTAATGTTTTAATTATGTTTAAGTGGACTTTGGCCGGCGACCGGC
CACTTATGTTTTATTATGTTTATTTTAAGTTTATTTCGTGCAAGCATATTTTTTTGCATGCCATGCCGGCACATTTGGGT
CTGCCTCCCCGTTGGATGGTCAAGCCGACCCATTTTACAATACGGACGCGCACGTCCGCCTGACAAAAACGGACAAAACG
CGTGCTGGTTTGGGTCGCCCCGTTGGAGTTGCTCTAACGATGTCACGAGGGGGATGACACGACAGGCACAACAACTTAGC
TGCTCACACATGTCC----------CGAAGTCATGGTTAAATTTGCTACTGCGATGGTCACGGAGTAGCA--GTGGTCGC
TTTCCTACATAGAGTATCTTGCAGGTGTGGCTCACGTCTCACTCATGTCACCGTCTAGCTTTGACCCATCGGGTCA----
-----GTCAGTCAGTCCACAGGGATCCGCAC-----GGACGCCGGGACAAGAGAACGTGAATTTGCCCTTCACCACTGGA
GTAGTAGCACTGGCTAGCCAGCTGCTTCATGCATAAGCAAAGGGGAAGTCAGCCATAGCCATAGCCAATTTCTCCTTCCC
CGACCGAGTGAATGGCACTTTCAGCAGGGCTTTCTTAATTTTAATTAATGAAGTGCTCCTGATGTGGTGTGCGGATCAGC
GAAGCGCGG-----TTGTCCGTACGCATGGCGTCCCGTGTACTG-------------------------GTACAGTAGAA
AAGGTGTTCCGTGCGCGCAGGCCGCGGAAACGTACGCACGCAAGGACAGCCGTACGTACCATCG-----------GTTTC
CGTTTCCCCCCGCCCGCAACGCCCACCAACCTTTCAGGGCCTCCTCCCCCGTCGCCACGCTACTTATAGAGGGGCAGAGC
CAGCTACGGCGGCACCACTCGGCTCGCTCCCCTGTCCCGCATTTCCCAGAGAGCTACCATTTGCCACTACAACACCTCTC
CCTCTCCCTCTCCCTCTCCATCTCCGGTAGGCTCCGGGGGAAGAAGAAGAACAGCACGCCGGCATCCGCCATGTCTCCGC
TCGCCGACCTTCTCAGCCTCGACCTGTCCGGCTGCACCGGCAAGATCATCGCCGAGTACATATGGTAACATC--------
-CCTCTTCCTCCATCTTCCTCAGCACTGTCCCAACCTCCCATCTCACCTTCCTTCCA-----------------------
----------------------------------------------------------------------AGTCAGGCAG
GCCACATAT--TTTTT-TCCTCCCCACAAATCCCATCTCACGTTTCTTTCTAGTTTAGTTTACTA---------------
----------------------------------------------------------TACTAGTGCGTTTCTCAAATTT
TGAGCCCAGTAAAAACCCTTCTCTTG-----TTTTTAGGCCT------TGATCTGTTGCCAATATGTTTTTTTTTTCTCT
T----------TTTTTCTTT--GTTTGGCTATGTGCATCTTGGCTATGCCTTGGCTAGGTGTTGCTGGTCATGATTTGTA
TCTGCATGATACTAGTACTTCCTCTGTAAAGAAATATAAGAGTGTTTTGGTCTAAATGATCTTTGATCTAAACGCTTTTA
TATTTTTGTAGGGGGGAGGGAGGGAGTACATTATAAGTTAATAAATTGGGGAAATCGGCATCGTACTTTTATGCCTTATT
ACTAACCTACTTCCATATACA-----CCTTGCCTAATCCAGGGTCGGCGGCACGGGCATGGACGTCAGGAGCAAAGCCAG
GGTAAGCCT----AACCCACGACGACTCATTACTTTGCCGGCCGGCTCCTTTTTGTCTAAG-----CTGTGACGGCACTG
CAAGCATGATATGTTCCTAACACTTCCTGTGACCC-TTTTGATGCCTTGGATATTCACAATCAGACGCTGCCCGGGCCCG
TTGATGACCCCAGCAAGCTCCCAAAATGGAATTTCGACGGCTCCAGCACCGGCCAGGCCACGGGCGACGACAGCGAGGTC
ATCCTCTGGTAAGCCCTTGACTGCACTCTTCACATAACCATCATGCCTTGGCTTGCGTGCCTTGAGGCTGAGCTAATCTG
AATTTCATGTCTTGCTCCTGCCAAGCCCTCAAGCCATCTTCAGGGACCCATTCAGGAAGGGGAACAACATCCTGGTATAT
AAGAATGATCAAGAT----CCTCCTTGTTTTTTCATTCATGGAT------------------------------------
-------------------TTCGTGTTATTGTTTATTTGTGTTAATGAATTTTGAAAAGTTGTTCATGAGTGCTTTTTCA
CCTCTAGTATTTTTTTTTAACCTCGCGCGTTTAGGTCATCTGTGACTGCTATGCGCCTAACGGAGAGCCGATTCCGAGCA
ACAAGCGGTACAACGCGGCGAGGATATTCGGCCATCCCGAGGTCAAGGCTGAAGAACCATGGTCGG----TACTCAGTTG
CTCTGTTCTATAGAAATTAGTCCACTACTTTAATTTTTGCACATAATTTAATTCATGTGGCAATTAATCTTGTGACACCC
CCTTATGTTGCCTGAAATGTAAGGTATGGGATTGAGCAAGAGTACACCCTTCTTCAGAAGGACACCAACTGGCCCATTGG
CTGGCCACTAGGGGGTTACCCTGGCCCTCAGGTAACTTAACTAGACATGCTGCATATTGCAGCACTCTTATTAAGAGCAA
GTCTTAGCCAAGATCACTCCACTAAGTAAGGGAGGAAACTTGGCTGTAAATGATGT--TAGCTTAGCACTTGCTGACAAC
AGTTCAGAAATGTTGGACCGATAGTGACACTGGCAGAGCAAAATGTGTGTGACAGGGACCTTACTACTGCGCCGCGGGTG
CGGAGAAATCTTACGGGCGCGACATCGTCGATGCACACTACAAGGCCTGCCTCTACGCCGGCATCAACATCGGCGGCATC
AATGCAGAAGTCATGCCAGGACAG--------------------------------------------------------
---------------------------------TGGGAGTTCCAAGTCGGCCCTTCCGTCGGCATCTCGGCCGGCGACGA
GCTCTGGGCGGCTCGCTACATCCTGGAGGTAAATG-AA--ACCGCCTCATCTGGTTGAATGAATG-AATAAAATGCAACT
TGTGCTGATAAGAAA--TTTTTCCTTTGTGTAACCCAATAGAGGATCACTGAGATTGCTGGCGTCGTCGTCTCCTTCGAC
CCCAAGCCGATCCCGGTGAGCAT---TTCTTCTTCTTCTTCTTGTGCCACAAGTGTCACCTTGATCTGCCGTTCCACTGG
CCAGCCAGCCATATGTAACTTTGCATATGTGTGTGACTGTAGGGAGAATGGAATGGTGCTGGTGCCCACACAAACTACAG
GTAAGATAAAGAGAGCAAGCCAAGGGATGCATCGCCGTCTGCTATACTCTAGTCTTGTGTTATGGGTTATGACATGATCC
TGCTGATG---TCTGAATGCAGCACCAAGTCGATGAGGAGCGAGGGCGGGTACGAGGTGATCAAGAAGGCGATCAAGAAG
CTCGAGGCGCGGCACATGGAGCACATCGCCGCCTACGGTGAGGGCAACGAGCGCCGGCTCACCGGCCGCCATGAGACCGC
CGACATCAACACCTTCGTATGGGTAAGTAGGAAAGCCCCACGGGGAG---------TTCAGAGTT----CAGAGTCACCA
CCATTGCTGCTCTTCTCTGACTGCTTTCCGGCTGCATTGTTTGTTTGTTTTTTGCAGGGCGTGGCGAACCGCGGCGCGTC
GGTGCGGGTGGGCCGCGACACCGAGAAGGAAGGCAAGGGCTACTTCGAGGACCGGAGGCCGGGGTCCAACATGGATCCCT
ACGTCGTCACCTCCCTGATCGCCGAGACCACCATCCTCTGCAAGGCCGGCCTCTCCAATGGCAAGTAGATGTCATCTTTG
ATGGGTTCTGTCTTCTGTGTGAGTGCCCGTGGTTG----TGTGTGTGTGTGTGTGTGTGTGTG----------TGCAGTG
ATG----------AGACTGGCAGGGTTTGAATAATGATGATAAAGCAATAACATGTAATGTAATG--------TGCTTGT
-GTGGCTGGATGTATGTTCCTCGTCCTGAACTTGCCTGTGGCCTGCAAACATCTCGTGTTA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>SNPs
---------S----------------------------S------------------------------------S----
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S--------S----------S----------SS-------S-------S------SS-S--
--------------------------------------S---------------------------S--S-----S----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------S------S--S------------------S-SSS----
-S----SSSSS-SSSSSSSSSSSSS------------S--S--------------------S---------S--S---S-
---------S--------S--------S-----------------S-S------------------S-------------
---S---------------------S-----S-SS------------------------------------------S--
-------------------------------------------SSSS---------------------------------
--------S-----S------SSSSSSSSS-SSSS-SSSSSS-SSS--SSSSSS-SS-----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------SSSSSSSSSSSS-----
-------------------S------------------------------------------------------------
-----------S---SSSSSSS-SSS--------S---------------------------S-----------------
-------------S-----SS-----------------------------------S-S---------------------
--------------------------------------------------------------------S-S-------SS
S----S--------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-------
---------SS-----S---------S-----------------S-------------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------
----S----------S--S-S-SS-SSSSSS------S----------------------------S----------S--
-SSSSSSSSSS-----SS----SS---S-S--------------------------------------------------
-SS--S-S--S---------------------------------------------------------------------
--------------------------------------S--S--------------------------------------
-------------------S-S-------------------------------S--------------------------
---------SSSS-------S-S-----S--S------------S----S---------SSSSSSS--------------
-----------------------------------S------S-------------------------------------
-S--S-----------------------------------------------------------------------S---
-------------------------------------------------------------S------------------
------------------------------------------S--------------S----------------------
----SSS-SS-SSS------------S----------S--SS-SS--S------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS--S--S--S--------------S-----S--S-S---S-------------S-SSSS-SS
SS-SS-SSSS-----------------S--S-------------------------------------------------
------------------------------------------------------------------SSSS-------S--
----S-S------------------------S-----------------------S------------------SSS---
----S---------------------------------------------------------------------------
------------------------S-------------------------------------------------------
----------------------------------------------------------------------SS--------
------------S---S-S---S---------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------S-S-S-------------------------
--------S---------S-------------------------------------------------------------
-----------------------------------S-------------S----S--------------S-------S--
----------------S-----------------------------------------S--S------------------
----------------------------------------S--------S-----------------------------S
-----S--S---S-S----------S----------S--S----------------------------------------
--------S-SS--------S--S-S--------------SS----------------------S-----------S---
-----SS-SSS----S------------------------------S---------------------------------
--------------------------------------S-----------------------------------------
-----------------------------S--SS-SSSSS-SS-S--SSSSSSSSS--------S-------------SS
S-SSSSSSS--SS----------------------S----------SS--------------------------------
--------------------------------------------------------------SS----------------
--------------------------------------S----------S-------------------SSSS-------
-----------SS----------------------SSSS-------------------S----------------SSS--
SSSSSSSSSSSSS-------------------------------------------------------------------
-S---------------------------------S-------------------------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2533
--------------------------------------------------------------------------------
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---------------------------------ACTCGCACAACAGAAGAGCT---------------------------
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>reverse_4239
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------TT
GTGGCATCTGGCATGGAT--------------------------------------------------------------
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>forward_3097
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-------------------------------------CCCATCTCACCTTCCTTCCG-----------------------
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>reverse_4557
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----------------------------------------------------------------------------CCCC
TCTTGTGTTGCCTGAA----------------------------------------------------------------
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>forward_3470
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----------TCTTTGGCAGACCGTTGACC--------------------------------------------------
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>reverse_5531
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----------TTCTGGATGCAGCACCAAGT--------------------------------------------------
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>forward_5001
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---------------------CAGGTAGTTTCAGGCGCAGA---------------------------------------
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>reverse_6253
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------------TTTGGCCGGGAAAGAGTCTC------------------------------------------------
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-----------------------------------------------------
