>input_sequence_27278
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-----------------------------------------------------------------------GCCATCGCT
CCACCATATTGTGC---CGCGCGCTTGACCAGCCCAGGCCCCTCTCCCCGTTTCGGAGCTCCATCCGTGTCGATCCATGG
GGAGGCTGTGCTGCGCGGCGGCTGCGCTGCTGCTGCTGCTCGCCTGCC---TCAGTTTCAGCCTTGGCGCCTGCAGCTCC
GATGCTCAGCGAGGTATGTCGGTGTGTGTACCTCTGCTGCAGTGCTGCTGCTGAAGAAACATTGCTGCTATTTGATTCTT
GTGC--GTGTTCATGTCATTGGAGCAAGCTTCTTCCCTTTTTTTAGTT----------TACTTGCTTGTTTTTGTTTCTT
TAAAGTTGAGATGTATAGTGATGGTAATTAAGTACGAACTCTCTCACTGTAGGATGGGTGAACGACCGGGAGGAAGATGC
ACGCCCCGCAGACAGGTGAGATCTCTCTCACCATACCTTTCATGTTCTGTGCAGGAAGGCTCTGAATTTCAGTGTCACTG
GGAGGAAATAGAGTGTAAAATCTCGTGAAAGCCATTATAGTAGTAGCATGAAATCTTCCTTCGTCTAGGCAGAGTAGCTT
GGAAACTTCTTCATCTGCATGTTTCG--TGTTTCGTCATCGCAACATTCCACTCTCCATTTTAAATTCGCGAGGAAAACG
ATTAAAAA--ACACTTAAAATACTGCAAAAACATTCTTCGCGGCCATCTTCTCAGATTGCATCGCATGGATAAACACCAA
TAAGATCTGAGGTGGGAATGGCGTGTCGGCTGTCAGAGACGGACAGCTGAACCACCGAGCAACCCTGGTTGGTGCATGTC
CGTCGTCCAATTGTTCTTCACCGCTTCTGCTCACTCCC----ATCTGCCGACTCCAATCATTGGCAGGCGTGTAGTCCAG
GCGGTACACATCCGAGAAGCTCTGCCACAACCAACCAGGTACAGTTCCAAGCAGTCGACGGCGTTCCCGCAGTGGCCACC
CTGGCCATGGGCACCGGCACCGACGCCGACGCCGAGTTCTCCGCCGTTGCAGGGTGCTGGCTCCCCGTCAAGCGCCCCCG
CACCGTCGCCGGAGGTCGCCAAGCCTCTGGCAGTGCCGCCTCGGGACGTCGAGAAGCCTGCGCACAGCATCACGGTGCCA
CCGATGCCAGCCACGGTGGTGGCCCACGGCGCTGCAGCGGTCGGAGAACCGTCGACTGAGGCAGCGGGGCACGCTCCTAC
CAGGCGGCGTGTCTATGTCATCGCCGGAGCAGGAGCTTCCCTCCTTGTGGCCATTTCGGCGGCGCTGTTCGTCCTGTGCT
ACCGGTCCAATAAGGTGGTCACCGTCAGGCCGTGGGCGACCGGCCTCAGCGGGCAGCTGCAGAAAGCGTTCGTGACAGGT
TCGGCTCGCCCC-TGAAAACTGTGCCCAAGTTTCCATCTGTGCTGCTACGTGGCTCGCTTCTTTTCTTGGAAGTGATTGG
GAGATGGCTGCAGGCGTGCCGTCGCTCAAGAGGTCGGAGCTCCAGGCGGCCTGCGAAGATTTCAGCAACGTCATCGGCTG
CCTGTCGGATTACATGATGTACAAGGGGACGCTGTCGAGCGGCGTCGAGATCGCCGTCATATCGACGACGACGAAGTCCG
GCAAGGAGTGGTCCAAGCACTGCGAAGCCCAGTTCAGGAAAAAGGTGGCTGCAAAGCTAGGATGAAACTGAACAAATTAG
ATAG----TATTACCCTGAAAATAAATAGACTTACCTTAATGAACTTAGTAATGATGGGCATTGTAC-TGTTTCAGATAA
CAAGCCTGTCCAGAGTTAACCACAAGAACTTTGTGAACCTGCTGGGCTACTGCCAGGAAGAGCAGCCGTTCACAAGGATG
ATGGTGTTCGAGTATGCTCCAAACGGCACCCTCTTCGACCATCTCCATGGTAAGATTAATGGAGTTTCATCCATCAGACG
TT----TTTACAAGAGCTGTAGCAGATTAACTAACAATG--GTGTGGTTCGCTGCAGTGAGGGAAGACGGTCACCTGGAC
TGGCCGACGAGGCTGCGGGTGGCGGTGGGGATCGCCTACTGCCTGGAGCACATGCACCAGCTGAGCCCGCCGGAGATCCT
CAAGACGCTCGACACGTCCACCGTGTACCTTACCGACGACTTCGCGGCCAAGATTGCGGATGTCTTCTTCTGCTCGGACG
AC------GCCTCGTCGACAAGGGCGGAGATGGCGAGCCTGCAGTCCCTCCTGGCTCTGTCCGACAGGGAGAGCGTTGTG
TACAGCTACGGCATGGTGCTGCTGGAGATCATGTCCGGCAGGTTCACGGCGTCGGCCGGCGGCCTGCTGGAGGGCTGGGC
GGCGAGCTTCCTCCGAGGGGAGAGGCAGCTGAGGGACGTCATGGACCCTGGCCTGAGCTGGAACGCGCCCCGCCAGGCCG
AGACCGTCAACAGGCTGGACGGCGTGATACGGTCCTGCACCGACCGGGAGGCGAGGCGGCGACCCGCGATGGCAGAGGTG
GCGAGGCGGCTGAGGGAGATCACGGCCATGCCGCCGGAGGCGGCCACCCCCAAGGTGTCGCCGCTGTGGTGGGCGGAGCT
GGAGATCATCTCCACCGAGGCCACCTGAAG-------------------------GAGCTGAGCATACAGGTTTGCTACA
A-GAGTTCGTATACCAACAGTTGAAATCGCAGTGTGTGCAAGTGGTGTAGCATAGCATAGTGACAAAGGTGTGCTTGTAT
TTTCGCTTCACTACAGACC-TTGTAGTTTGTCCAGATTTTGTAACCAGACTGCCTCAGTGCA---------TACTGCAGC
TCGCAGAAACACCATGCAGAAGAGACATC---------------------------------------------------
-----------------------------------------AGCAGCAGCATAGCATGCATGCAAGTACGCAACACAAAC
GAGTAGAATACAATAATAAGTTTAGCTGTTCAAG----------------------------------------------
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----
>chr1A_1_TraesCS1A01G222700
GAGGAGAAGGCGGTGATCTTTCGTTGCTCCCAGAGCCAGCTGACGAAGGTCTCAGCTCGATGATGTCTCAGTGAGTAGTG
CGCGGAGAAGGCAGCGGTGACCGACCACGAGTCTCAATGTTGTGCGGGCTGGTACTGCTGTTTCTTCGGCGCACGCTCCT
ATGTCTCAGTCGATACTATAGTCTTTTAATTTCGTATGGACATTCGTGCAAAAAATTCTTTTCACTTTTTTCTTTTTTTT
CTTACTCCCTCCAGTCTTTTTTAGTCTGTATATAAGTTTTGACTCAAGTCAAAGCATCTTTACTTTGACCAAACTTATTT
AAAAAAGGATCAACATTTACAATGTCAAATCAACATAGTTAGATTCATTACGAACTGTAGTTTCATGGAATATATATTTA
GTATGATAAATGTTGATATTTTTTTAATATATATTTGGTCAAACTTTATAATGTTTGACTTGACCAAAACCTAATACGCG
AAGTAAAAAAGACCGAAGGAAGTATTATACTATATCACTTGACTAAGACTTGGTTAAGTTTCAGTCGACTGAGACCTAAC
CACACCCATAATAAAAAACAGATGAGAGCCCGTCTATGAAACCACGGTAGGTGGTGCTCGGCCGA---------------
-----------GTGAACCCGACCGCTCACGTTAGCGCATCCCCGCCGCGACAGACGGCGACGCATT-TAGCCTTGTTTTC
ACCTGGAGCCGTCCAATGCGGCAGTCGGTAGACTGGACTCCGAGACCGAGAGTGGGCACGCACGGACGCGCGTCGTACCG
CTCTAATCCGAACGGAGCCAAGCAAGCAGGATTTCATCGGTGCGTGCCGTGGGCGGCGTGGCATTCGGTGGTCACGCCCC
CAGCAAAACAACAA-GCCATCGTCGAGGCCCCCCTCCCTCCCTCCTCTCCTTCCAGGTGGCCGCGCGCCCAATATCCTCC
CTGCTCCTCGCTCCTTGCTCGGTTATCCGCCTCTTGACCCCGAGC---CTTCCTCCTCTCCCCTCCCTCGCGCCATCGCT
CCACCATATTGTGC---CGCGCGCTTGACCAGCCCAGGCCCCTCTCCCCGTTTCGGAGCTCCATCCGTGTCGATCCATGG
GGAGGCTGTGCTGCGCGGCGGCTGCGCTGCTGCTGCTGCTCGCCTGCC---TCAGTTTCAGCCTTGGCGCCTGCAGCTCC
GATGCTCAGCGAGGTATGTCGGTGTGTGTACCTCTGCTGCAGTGCTGCTGCTGAAGAAACATTGCTGCTATTTGATTCTT
GTGC--GTGTTCATGTCATTGGAGCAAGCTTCTTCCCTTTTTTTAGTT----------TACTTGCTTGTTTTTGTTTCTT
TAAAGTTGAGATGTATAGTGATGGTAATTAAGTACGAACTCTCTCACTGTAGGATGGGTGAACGACCGGGAGGAAGATGC
ACGCCCCGCAGACAGGTGAGATCTCTCTCACCATACCTTTCATGTTCTGTGCAGGAAGGCTCTGAATTTCAGTGTCACTG
GGAGGAAATAGAGTGTAAAATCTCGTGAAAGCCATTATAGTAGTAGCATGAAATCTTCCTTCGTCTAGGCAGAGTAGCTT
GGAAACTTCTTCATCTGCATGTTTCG--TGTTTCGTCATCGCAACATTCCACTCTCCATTTTAAATTCGCGAGGAAAACG
ATTAAAAA--ACACTTAAAATACTGCAAAAACATTCTTCGCGGCCATCTTCTCAGATTGCATCGCATGGATAAACACCAA
TAAGATCTGAGGTGGGAATGGCGTGTCGGCTGTCAGAGACGGACAGCTGAACCACCGAGCAACCCTGGTTGGTGCATGTC
CGTCGTCCAATTGTTCTTCACCGCTTCTGCTCACTCCC----ATCTGCCGACTCCAATCATTGGCAGGCGTGTAGTCCAG
GCGGTACACATCCGAGAAGCTCTGCCACAACCAACCAGGTACAGTTCCAAGCAGTCGACGGCGTTCCCGCAGTGGCCACC
CTGGCCATGGGCACCGGCACCGACGCCGACGCCGAGTTCTCCGCCGTTGCAGGGTGCTGGCTCCCCGTCAAGCGCCCCCG
CACCGTCGCCGGAGGTCGCCAAGCCTCTGGCAGTGCCGCCTCGGGACGTCGAGAAGCCTGCGCACAGCATCACGGTGCCA
CCGATGCCAGCCACGGTGGTGGCCCACGGCGCTGCAGCGGTCGGAGAACCGTCGACTGAGGCAGCGGGGCACGCTCCTAC
CAGGCGGCGTGTCTATGTCATCGCCGGAGCAGGAGCTTCCCTCCTTGTGGCCATTTCGGCGGCGCTGTTCGTCCTGTGCT
ACCGGTCCAATAAGGTGGTCACCGTCAGGCCGTGGGCGACCGGCCTCAGCGGGCAGCTGCAGAAAGCGTTCGTGACAGGT
TCGGCTCGCCCC-TGAAAACTGTGCCCAAGTTTCCATCTGTGCTGCTACGTGGCTCGCTTCTTTTCTTGGAAGTGATTGG
GAGATGGCTGCAGGCGTGCCGTCGCTCAAGAGGTCGGAGCTCCAGGCGGCCTGCGAAGATTTCAGCAACGTCATCGGCTG
CCTGTCGGATTACATGATGTACAAGGGGACGCTGTCGAGCGGCGTCGAGATCGCCGTCATATCGACGACGACGAAGTCCG
GCAAGGAGTGGTCCAAGCACTGCGAAGCCCAGTTCAGGAAAAAGGTGGCTGCAAAGCTAGGATGAAACTGAACAAATTAG
ATAG----TATTACCCTGAAAATAAATAGACTTACCTTAATGAACTTAGTAATGATGGGCATTGTAC-TGTTTCAGATAA
CAAGCCTGTCCAGAGTTAACCACAAGAACTTTGTGAACCTGCTGGGCTACTGCCAGGAAGAGCAGCCGTTCACAAGGATG
ATGGTGTTCGAGTATGCTCCAAACGGCACCCTCTTCGACCATCTCCATGGTAAGATTAATGGAGTTTCATCCATCAGACG
TT----TTTACAAGAGCTGTAGCAGATTAACTAACAATG--GTGTGGTTCGCTGCAGTGAGGGAAGACGGTCACCTGGAC
TGGCCGACGAGGCTGCGGGTGGCGGTGGGGATCGCCTACTGCCTGGAGCACATGCACCAGCTGAGCCCGCCGGAGATCCT
CAAGACGCTCGACACGTCCACCGTGTACCTTACCGACGACTTCGCGGCCAAGATTGCGGATGTCTTCTTCTGCTCGGACG
AC------GCCTCGTCGACAAGGGCGGAGATGGCGAGCCTGCAGTCCCTCCTGGCTCTGTCCGACAGGGAGAGCGTTGTG
TACAGCTACGGCATGGTGCTGCTGGAGATCATGTCCGGCAGGTTCACGGCGTCGGCCGGCGGCCTGCTGGAGGGCTGGGC
GGCGAGCTTCCTCCGAGGGGAGAGGCAGCTGAGGGACGTCATGGACCCTGGCCTGAGCTGGAACGCGCCCCGCCAGGCCG
AGACCGTCAACAGGCTGGACGGCGTGATACGGTCCTGCACCGACCGGGAGGCGAGGCGGCGACCCGCGATGGCAGAGGTG
GCGAGGCGGCTGAGGGAGATCACGGCCATGCCGCCGGAGGCGGCCACCCCCAAGGTGTCGCCGCTGTGGTGGGCGGAGCT
GGAGATCATCTCCACCGAGGCCACCTGAAG-------------------------GAGCTGAGCATACAGGTTTGCTACA
A-GAGTTCGTATACCAACAGTTGAAATCGCAGTGTGTGCAAGTGGTGTAGCATAGCATAGTGACAAAGGTGTGCTTGTAT
TTTCGCTTCACTACAGACC-TTGTAGTTTGTCCAGATTTTGTAACCAGACTGCCTCAGTGCA---------TACTGCAGC
TCGCAGAAACACCATGCAGAAGAGACATC---------------------------------------------------
-----------------------------------------AGCAGCAGCATAGCATGCATGCAAGTACGCAACACAAAC
GAGTAGAATACAATAATAAGTTTAGCTGTTCAAGACGTCCAATGCCCATAAACCCCACTGCCGTCGAATGTGACGCATAA
CGACTTGACAGACTGAAAATAATAAACCACCACAGAAGACATCTACGACAATGTTCCTACGACTGACTGACGCTATACTT
TGGTACCCTTCTGTTCATCTGAACCAAACCCAAACGGAGTTTGGCGCAGCAACAAAACCAAACATCCACCATAACAGACG
ACGCAAGATAATTTCTCGTCTAGGAGACTATCGCTTGGTTTATCATCCCCTGGGTCCATGACGCCGTCTCCCTGACTTCA
TCATCCAAATCGAGGCACTCCCTCAGGAACTCAACGTGGAAGAGGTGGCTCTTGAACAGATCCTTCGAGATTGGC-----
---CCAAGCGTGTCCGCAAGATCCCCCAGGACAGCAACTGCAGCCTTTGTCACGCTCTCGTCCCTGAAAGTA--AACGCA
TGCATATATATAATGTTAAGCAAGAGAACCAATCACCCATGTAATAATGTAACAAAAAAGAAAGGCGAGAGAAATGACAT
GGACCTGCTCCGATCTTTGTAGACAGCTTCAGTGAACTGCAACAGATGTCCTGCATAAGGTATCATCAGCTGAGCTTTTG
CGCCCTTTATGCCCTGTAGTATGCCAGAGTACGCCTCAAATATTCCCCGTCTGAGCTGGTTACCATAATCAACCATATCC
TCATCATTTTGATCCAAAACAACAAGAAGCTCAGCCGCCCCTTGAAGCATTGGCATAGCATACGGCAGGTACTTCTCAAA
ATTCTCACCGATGGCAAGAGCAATGTCTCCAAAGCATGAGAAAATCGGAGGCTTGACAGACCTGTTGAGCTGTGAGTTTG
AGAGATCCTTGAGAAGCACAGTCATGATCCCATCACAGAAGGGCAAAATTTTATCTTCCAAGGCACGGCAAATATCACCC
ACCACCCCTACAGAGATGGAGCATACTTGGTATTCTTCATAATTCTGCAAGCCTGCCTCAAGGTACTTGAAAAACTCAGG
CATG
>chr1D_597
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------------------------------------TGAAACCACGGTAGGTGGTGCTCGGCCGACTTGGACAATTCTAT
TAGACCAGCGAGTGAACCCGACCGCTCACGTTAGCGCATCCCCGCCGCGACAGACGGCGACGCATT-TAGCCTTGTTTTC
ACCTGGAGCCGTCCAATGCGGCAGTCGGTAGACTGGACTCTGAGACCGAGAGTGG----GCACGTACGCGCGTCGTACCG
CTCTAATCCGAACAGAGCCAAGCAAGCAGGATTTCATCGGTGCGTGCCGTGGGCGGCGTGGCATTCGGTGGTCACGCCCC
CAACAAAACAACAAAGCCATCGTCGCGACCCCCCTCCCTCC----TCTCCTTCCAGGTGGCCGCCCGCCCAATATCCTCC
CTGCTCCTTGCTCCTTGCTCGGTTATCTACCTCTTGACCCCGAGCCTTCTTCCTCCTCTCCCCTCCCTCGCGCCATCGC-
-CACCATATTGTGCA--CGCGCGCTTGACCAGCCCAGGCC----TCCCCATGTCGGAGCTCCAACCGTGTCGATCCATGG
GGAGGCCGAGCTGTGCGCCGGCTGCGCTGCTGCTGCTGCTGCTCGTCACCTTCAGTCTCAGCCTTGGCACCTGCAGCTCC
GATGCTCAGCGAGGTATGTCCGTGTGTGTACCTC--------TGCTGCTGCTGAAGAACCATTGCTGCTATTTGATTCTT
-TGTGTGTGTTTATGTTATAAGAGCAAGCTTCTTCCCTTCTTTTGGTTAATTTTTGCCTACTTGCTTGTTTTTGTTTCTT
TAAAGTTGAGATGTATACTGATGGTAAGTTTT--CGAACTCTCTCACTGTAGGAAGGGTGAACAACTGGGAGGAAGATGC
ACGCCCCGCAGACCGGTGAGATCTCTCTCACCATACCTTTCATGTTCGGTTCAGGAACGCTCTGAATTTCAGTGTCACTG
GGAGAGAATAGAGTGTAAAATATCGTGAAAGCCATTATAGTAGTAGCATGG-ATTTTTCTTCGTCTAGGCAGAGTAGCTT
GGTAACTTCTTCATCTGC---------ATGTCTCGTCATCGCAACATTCCACTCTTCATTTTAAATTCGCAAGGAAAACG
ATTAAAAG--ACACTTAAAATACTGCAAAAACATTCTTGGCGCCCATCTTCTTAGATTGCATTGCATAGATAAACACCAA
TAAGATCGGAGGTGGGAATGGCGTGTCGGCTGTCAGAGATGGACAGCTGAACCACCGAGCAACCCCGCTTGGTGCATGTC
CCTTGTCCAATTGTTCTTCACCGCTTCTGCTCACTCCCTCCCATCTGCCGACTCCAATCATTGGCAGGCAGGATATCCAA
GCGGTACACATCCGAGAAGCTCTGCCACAACCAACCAGGTACAGGTCCAAGCAGTCGACGACGTTCCCGCAGTGGCCACC
CTGGCCATGGGCACCGGCACCGACGCCGACGACGAGTTCTCCGGCGTTGCAGGATGCTGGCTCCCCATCAAGCGCCCCCG
CGCCGTCGCCGGAGGTCGCCAAGCCTCTGGCGGTGCCGCCTCGGGATGTCGAGAAGCCTGCGCACAGCATCACGGTGCCA
CCGACGTCAGCCACGGTGGTGACCCACGGCGCTGCGGCGGTCGGAGAAGCTTCCACTGATGCGGCGGAGCATGCTCCTAC
CAGGCGGCGTATCTATGTCATCGCCGGAGCAGGAGCTTGCCTCCTTGTGGCCATTTCTGCGGCACTGTTCATCCTGTGCT
ACCGGTCCAGCAAGGTGGTCACCGTCAGGCCGTGGGCGACTGGCCTCAGCGGGCAGCTGCAGAAAGCGTTCGTGACAGGT
TAAGCTCGCCCCCTGAAAACTGTG-CCAAGTTTCCATCTGTACTGCTACGTGGCTCCCTTCTTTTCTTGGAAGTGATTGG
GAGATGGCTGCAGGCGTGCCGGCGCTCAAGAGGTCGGAGCTCCAGGCGGCCTGCGAAGATTTCAGCAACGTCATCGGCTG
CCTGTCTGACTACATGATGTACAAAGGGACGCTGTCGAGCGGCGTCGAGATCGCCGTCATATCGACGACGAAGAAGTCCG
GCAAGGAGTGGTCCAAGCACTGCGAAGCGCGGTTCAGGAAAAAGGTGGCTGCAATGCTAGGACGAAACTGACCAATTTAG
AATTTACTGTTTAAAAAAATCATCAAACCAAACAGTACCAGTAATTATTTGCCATTTTGCATTTGTGTTGTTTCAGATAA
CAAGCCTGTCCAGAGTTAACCACAAGAACTTTGTGAACCTGCTGGGCTACTGCCAGGAAGAGCAGCCATTCACAAGGATG
ATGGTGTTCGAGTATGCTCCCAACGGCACACTCTTCGACCATCTCCATGGTAAGATTAATGGAGTTTCATCCATCAGACG
TT----TTTACAAGAGCTGTAGCAGATTAACTAACAATATTGTGTGGTTCGCTGCAGTGAGGGAAGACGGTCACCTGGAC
TGGCCGACGCGGCTGCGAGTGGCGGTGGGGATCGCCTACTGCCTGGAGCACATGCACCAGCTGAGCCCGCCGGAGATCCT
GAAGACGCTCGACACGTCCACCGTGTACCTGACCGACGACTTCGCGGCCAAGATCGCGGACGTCTTCTTCTGCTCCGACG
ATGCCGATGCCTCGTCGACAAGGGCGGAGATGGCGAGCCTGCAGTCCCTCCTGGCTCTGTCCGACAGGGAGAGCGTCGTG
TACAGCTACGGCATGGTGCTGCTGGAGATCATGTCCGGCAGGTTCACGGCGTCGGCCGGCGGCCTGCTGGAGGGCTGGGC
GGCGAGCTTCCTCCGAGGGGAGAGGCAGCTGAGGGACGTGATGGACCCTGGCCTGAGCTGGAACGCGCCCCGCCAGGCCG
AGACCGTCAACAGGCTGGACGGCGTGATTCGGTCCTGCACCGACCGGGAGGCGAGGCGGCGACCCGCGATGTCAGAGGTG
GCGAGGCGGCTGAGGGAGATCACGGCCATGCCGCCGGACGCCGCCACCCCCAAGGTGTCGCCGCTGTGGTGGGCGGAACT
GGAGATCATCTCCACCGAGGCCACCTGAAGATGGCACCCGAGCTGCACCCTGATGGAGCATAGCATACAAGTTTGCTACA
GTGAGTTCGTACACGAACAGTTGGAATCGCAGTGTGTGCAAGTGGTGTAGCATAGT---GTGACGAAGTTGTGCGTGTAT
TTTCGCTTCACTAAAGACCTTTGTAGTTTGTCAAGATTTTGTAACCAGACTA----------------------------
---CAC-AACACCCTGCAGAAGCATAG-----------------------------------------------------
------------------------------------------------------------TGCAAGTACGCAACACAAAC
GAGTAGAATACAATAATAAGTTTAGCTGTTCAAGACGTCCAATGACCATAAACCCCACTGCCGTCGAATGTGACGCATAA
CGACTTGACAGACTGAAAATAATAAACCACCACAGAAGACATCTACGACAATGTTCCTACGACTGACTGACGCTATACTT
TGGTACCCTTCTGTTCATCTGAG------CCAAACGGGGCATGGCGCAGCAACAAAACCCAACATCCACCATAACAGACG
ACGCAAGATAATTTCTCGTCTAGGAAACTATCGCTTGGTTTATCATCCCCTGGGTCCATGACGCCGTCTCCCTGACTTCA
TCATCCAGATCGAGGCACTCCCTCAAGAACTCAACATGGAAGAGGTGGCTCTTGAACAGATCCTTCGAGATTGGT-----
---CCAAGTGTGTCCGCAAGATCCCCCAGGACAGCAACTGCAGCCTTTGTCACGCTCTCATCCCTGAAAGTATAAACACA
TGCATATATATAATGTTAAGCAAGAGAACCAATCACCCATGTAATAATGTAACAAAAAAGAAAGGTAAGAGAAATGACAT
GGACCTGCTCCGATCTTTGTAGACAGCTTCAGTGAACTGCAATAGATGGCCTGCATAAGGTATCATCAGCTGAGCTTTTG
CACCCTTTATGCCCTGTAGTATGCCAGAGTAAGCCTCAAATATTCCCCGTCTGAGCTGGTTACCATAATCAACCATATCC
TCATCATTTTGATCCAAAACAACAAGAAGCTCAGCCGCCCCTTGAAGCATTGGCATAGCATACGGCAGGTATTTCTCAAA
ATTCTCACCGATTGCAAGAGCAATGTCTCCAAAGCATGAGAAAATGGGGGGCTTGACAGACCTGTTGAGCTGGGAGTTTG
AGAGATCCTTGAGAAGCACAGTCATGATCCCATCACAGAAGGGCAAAATTTTATCTTCCAAGGCACGGCAAATATCACCC
ACCACCCCTACAGAGATGGAGCATACTTGGTATTCTTCATAATTCTGCAAGCCTGCCTCAAGGTACTTGAAAAACTCAGG
CATG
>chr1B_647
AGCCAA--------------------------------------------------------------------------
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---------------------------------------CCCCGCCGCGATGGACGACGACGCCATCTAGCCTTGTTTTC
ACCTGGAGCCGTCCAATGCGGCAGTCGGTAGACTGGACTCCGAGACCGAGAGTGG----GCACGTACGCGCGTCGTACCG
CTCTAATCCGAACAGAGCCAAGCAAGCAGGATTTCATCGGGGCGTGCCGTGGGCGGCGTGGCATTCGGTGGTCGCGCCCC
CAGCAAAACAACAAAGCCATCGTCGCCACCCCCCTCCCTCC----TCTCCTTCCAGGTGGCCGCGCGCCCAATATCCTCC
CTGCTCCTTGCTCCTTGCTCGGTTATCTGCCTCTTGACCCCGAGCCTTCTTCCTCCTCTCCCCTCCCTCGCGCCACCGCT
CCACCATACTGTGCACGCGCGGGCTTGACTAGCCCAGGCCTCTCTCCCCATCCCGGAGTTCCATCCGTGTCGGTCCATGG
GGAGGCCGAGCTGCGCGGCGGCTGCGCTGCTGCT------CGCTTGCC---TCAGTTTCAGTCTTGGCACCTGCAGCTCC
GATGCTCAGCGAGGTACGTCCTG-------CCTC--------TGCTGCTGCTGAAGAACTATTGCTGCTATTTGATTCCT
GTGTGTGTGTCTGTGTTATAAGAGCAAACTTCTTCCCTTCTTTTGGTTAATTTTTCGCCACTTGCTTGTTTTTGTCTCTT
TAAAGTTGAGATATATAGTGATGGTAA-----TACGAACCCTCTCACTGTAGGATGGGTGAACAACCGGGAGGAAGATGC
ACGCCCCGCAGACCGGTGAGACCTCTCTCACGATGCCTCTCATGTTCGGTGCAGGAACGCTCTGGATTTCAGTGTCACTG
GGAGAGAATAGAGTGTAAAATCTCGTGAAAGCCATTATCGTAGTAGCATGAAATATTTCTTCGCCTAGGCAGAGTAGCTT
AGAACCTTGTTCATCTGCATCATCTGCATGTCTCCTCATCGCAACATTCCACTCTTCATTTTAAATTCGCAAGGAAAACG
ATTAAAAAAAACAATTAAAATACTGCAAAAACATTCTTGGCGCCCATCTTCTTAGATTGCATTGCATGGATAAACACCAA
TAAGATT-----TGGGAATGGCGTGTCGGCTGTCAGAGATGGACAGCTGAACCACCGAGCAACCCCGGTTGGTGCATGTC
CCTTGTCCAATTGTTCTTCACCGCTTCTGCTCACC----CCCATCTGCCGACTCCAATCATTGGCAGGCGGGTAGTCCAA
GAGGTACACATCCGAGAAGCTCTGCCACAACCAACCAGGTACAGGTCCAAGCAGTCCACAACGTTCCCGCAGTGGCCACC
CTGGCCATGGGCACCGGCACCGACGCCGACGACGAGTTCTCCGCCGTTGCAGGGTGCTGGATCCCCGTCAAGCGCCCCCG
CACCGTCGCCGGAAGTCGCCAAGCCTCTGGCGGTGCCGCCTCGGGATGTCGAGAAGCCTGCGCACAGCATCACGGTGCCA
CCGACGCCAGCGACGGTGG---CCCACGGCGCTGCGGCGGTCGGAGAAACGTCGACTGAGGCGGCGGGGCATGCTCCTAC
CAGGCGGCGTATCTATGTCATCGCCGGAGCAGGAGCTTCCCTCCTTGTGGCCATTTCAGCGGCACTGTTCGTCCTGTGCT
ACCGGTCCAATAAGGTGGTCACCGTCAGGCCGTGGGCCACCGGCCTCAGCGGGCAGCTGCAGAAAGCGTTCGTGACAGGT
TAAGCTCGCCCCCTGAAAACTGTG-CCAAGTTTCCATCTGTACTGCTACGTGGCTCCCTTCTTTTCTTGGAGGTGATTGG
GGGTTGGCTGCAGGCGTGCCGGCGCTCAAGAGGTCGGAGCTCCAGGCGGCCTGCGAAGATTTCAGCAACGTCATCGGCTG
CCTGTCGGATTACATGATGTACAAGGGGACGCTGTCGAGCGGCGTCGAGATCGCCGTCATATCGACGACGAAGAAGTCCG
GCAAGGAGTGGTCCAAGCACTGCGAAACACAGTTCAGGAAAAAGGTGGCTGCAAAGCTAGGATGAAACTGAACAAATTAG
ATACTGCTTATTACCCTGAAAATAA---------------TAAACTTACTAATAATGGACAATGTGCG-GTTTCAGATAA
CAAGCCTGTCCAGAGTTAACCACAAGAACTTTGTGAACCTGCTGGGCTACTGCCAGGAAGAGCAGCCATTCACAAGGATG
ATGGTGTTCGAGTATGCTCCCAACGGCACTCTCTTCGACCATCTCCATGGTAAAACTAATCCAGTTCCATCCATAAGAGA
CGATGATTTTCATGAGCTGCAGAAGATTGACTAACGGTGTTGTTGCTTGCTGTGCAGTGAGGGAAGACGGTCACCTGGAC
TGGCCGACCCGGCTGCGGGTGGCGGTGGGGATCGCCTACTGCCTGGAGCACATGCACCAGCTGAGCCCGCCGGAGATCCT
GAAGACGCTCGACACGTCCACCGTGTACCTGACCGACGATTTCGCGGCCAAGATCGCAGACGTCTTCTTCTGCTCCGATG
AC------GCCTCGTCGACAAGGGCGGAGATGGCGAGCCTGCAGTCCCTCCTGGCGCTGTCCGACAGGGAGAGCGTCGTG
TACAGCTACGGCATGGTGCTGCTGGAGATCATGTCCGGCAGGTTCACGGCGTCGGCCGGCGGCCTGCTGGAGGGCTGGGC
GGCGAGCTTCCTCCGTGGGGAGAGGCAGCTGAGGGACGTGATGGACCCTGACCTGAGCTGGAACGCGCCCCTCCATGCCG
AGACCGTCAACAGGCTGGACGGTGTGATTCGGTCCTGCACCGACCGGGAGGCGAGGCGGCGACCCGCCATGGCAGAGGTG
GCGAGGCGGCTGAGGGAGATCACGGCCATGCCGCCGGACGCCGCCACCCCCAAGGTGTCGCCCCTGTGGTGGGCGGAGCT
GGAGATCATCTCCACCGAGGCCACCTGAAGATGGCACTGGAGCTGCACCCTGATGGAGCATAGCATACAGGTTTGCTACA
GTGAGTTCGTACGCGAACAGTTGGAATCGCAGTGCGTATGTGTATTTGGATGAAATAAAGACCACCTTGTAC--------
------------------------AGTTTCTCCAGATCTTGTAACCAGACCACCTGAGTGCAGCGGCTGCATACTGCAAC
TCGCAC-GACACCCTGCAGAAGAGACATTTTCTCCAGCAAAACGTTCGAGCGACAAATTCCTTGGAACAGATAAAGAATA
ACTTACCAGCGGAGACGATCGATAAGAACAATGTACCACCAAGCAGCAACATAGCATGGATGCAAGTAGGCAACACAAAC
GAGTAGAATACAATAATAAGTTTAGCTGTTCAAGACGTCCAATGACCATAAACCCCACTGCCGTCGAATGTGACGCATAA
CGACTTGACAGACTGAAAATAATAAACCACCACACAAGACATCTACGACAATGTTCCTACGACTGACTGACACTATACTT
TGGTACCCTTCTGTTCATCTGAG------CCAAACGGGGTATGGCGCAGCAACAAAACCAAACATCCAACATAACAGACG
ACGCAAGATAATTTCTCGTCTAGGAAACTATCGCTTGGTTTATCATCCCCTGGGTCCATGACGCCGTCTCCCTGACTTCA
TCATCCAGATCGAGGCACTCCCTCAAGAACTCAACATGGAAGAGGTGGCTCTTGAACAGATCCTTCGAGATTGGC-----
---CCAAGTGTGTCCGCAAGATCCCCCAGGACAGCAACTGCAGCTTTTGTCACGCTCTCATCCCTGGAAGTA--AACACA
TGCATATATATAATGTTTAGGAAGAGAACCAATCACCCATGTAATGTAACA--AAAGAAGAAAGGCAATAGAAATGACAT
CAACCTGCTCCGATCTTTGTAGACAGCTTCAGTGAACTGCAATAGATGGCCTGCATAAGGTATCATCAGCTGAGCTTTTG
CACCCTTTATGCCCTGTAGTATGCCAGAGTATGCCTCAAATATTCCCCGTCTGAGCTGGTTACCATAATCAACCATATCC
TCATCATTTTGATCCAAAACAACAAGAAGCTCAGCTGCCCCTTGAAGCATTGGCATAGCATACGGCAGGTATTTCTCAAA
ATTCTCACCGATGGCAAGAGCAATGTCTCCAAAGCATGAGAAAATCGGAGGCTTGACAGACCTGTTGAGCTGTGAGTTTG
AGAGATCCTTGAGAAGCACAGTCATGATCCCATCACAGAAGGGCAAAATTTTATCTTCCAAGGCACGGCAAATATCACCC
ACCACCCCTACAGAGATGGAGCATACTTGGTATTCTTCATAATTCTGCAAGCCTGCCTCAAGGTACTTGAAAAACTCAGG
CATG
>chr1D_4070
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--------------------------------GCTTGGTTTATCATTCCCTGCGCCCACGATGCAGCCTCCCTGACTTCT
TCGTCCGAATCAAGGCACTCCCTAAAGAATTCAACATGGAAGAGGTGGTTCCTGAACAGATCTTTTGATATTGGG-----
---CCAAGTGTATCCGCGAGATCACCAAGGACTGCAACTGCAGCCTTTGTCACACTCTCATCCCTGAAAGCA--GACATA
TGCATATACCGCTAAGAAACGGAACAGTC------AC-------TCATATAACTAAAAGAAATGGCAATGAAAATGATGT
GCACCTGCTCCCATCCTTGTAGACAGCTTCAGTGAACTGCAATAGGTGGGTTGCATAAGGTACCATCAGCTGAGCTTTTG
GACCTTTTATACCCTGTAATATGCCAGAGTAAGCCTCAAATATTCCCCGTCTGAGCTGATTACCATAGTGAACCATATCA
TCGTCACTTTGATCTAAAACAACAAGAAGCTCAGCAGCTCCTTGAAGCATTGGCATGGCATATGGCAGGTATTTCTCAAA
ATTCTCGCCGATAGCAAGAGCAATGTCTCCAAAGCATGAGAAAATGGGAGGTTTGACAGACCGGTTGAGCATTGGATTTG
AAAGATCCTTGAGGAGAACAGTCATAATTCCATCACAGAATGGCAACACTTTATCTTCTAGTGTACGGCAAATGTCACCC
ACCACTCCAACAGAAATGGAGCATACTTGGTATTCTTCATGATTCTGCAAGCCTGCTTCAAGGTACTTGAAAAACTCCGG
CATG
>chr1D_4077
--------------------------------------------------------------------------------
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---------------------------------------TTATCAACCCCTGGGACAATGCGATT---TCCCTGACTTCG
TTGTCGGAATTAAGGCACTCGCTCAAGAGCTCAATATGGAAGGGGTGGATCTTGAACAAATCTTTCGAGATCAGAGTATC
AGACCAAGCATGTCTGCGAGATCACCCAGGGCCGCAACCGCAGCCTTTGTCACACTCTCATCCCTGACA-----------
--CATAAATATAATGATGAGGGGGGAAAACACAATAC-------CCGTATAACGAAAAGAAAGCAGCGAGAACA--ATGT
GCACCTGCTTGGGTCTTTGTAGACAGCTTCCGTGAACTGAAATAGATGGCTTGCATAAGGTAGCATCAGCTGAGCTTTT-
---CCTTCATACCATGCAGTATGCCGGAGTAAGCCTCAAATATTCCATGTCTCAGCTGGTTATGGTGAACAATCGTATCT
TCGTTGCTTTGATCCAAAACAAC---AAGCTCAGCAGCTCCTTGAAGCACTGGCATGGCATATTGCAGGTATTTCTCGAC
ATTCTCGCCAATAGCAAGAGCAATGTCTCCAAAGCATGAGAAAATTGGAGGTCTGACAGACCGGTGAAGCATTGAACTTG
CAAGATCCTTGAAAAGAACAGTCATACTGCAATCACAGAAAGGCTGAATTTTATCTTCAATGGCACGGCAAATATCACCC
ATCACCCATACAGAAATGGAGCATATTTGGTATTCTTCCTAATTCTGCAAGCCTGCTTCA--------------------
----
>SNPs
SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------SSSS-----S---------------
-------------S------------------------------------------------------------------
-------------------------S-S-------------SSSS-----------------------------------
--------S------------------S----------------------------------------------------
----------------------------------------S--------S-S----------------------------
------S-S-----------------------------------------------------------S-----------
--------------------S-------------SSSSSSSS----------------S---------------------
---S-------S----S--SS------------------S----S-----------------------------------
---------------------------S-SSS-------------------------------S----------------
-------------S---------------------------------S---------S----------------------
----SS------------------------------------------------S--S----------------------
--------------------SS-SS------S-----------------------S--------------S---------
--------------------------------------S---S---------S---------S-----------------
-------S-------------------------------S-------------------------S--------------
-S-S------------------------------------------------------------------S--------S
--------------------------------------------S---------------S-------------------
-------------------------------S------------------------------------------------
-------------------------------S--------------S---------------------------------
----S----------------S-------------S------------S-------------S--------S--------
----------S----------------------------------------------S-----S----------------
--------------------------------------------------------------------------------
-SS---------------------S----------------S--------------S-----------------------
---------------------S----------------------------------------------------------
-----------------------------------------------------------------------S--------
----------------------------S---------------------------------------------------
---S----------------------SSS-SSS-SSSSS--S------S----S-----------S--------------
-------------------------------------------------------------------S------------
--------------------S--------S--------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
S-----------------------------S-----------------------S-----S--------------S----
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------S--S--------------------------------------
-----------------------------------------------------------SS-------------------
S----------S--S--------S-------------------------------S-S------S---------S-----
-------------S-------------------------------------S---S----------------------S-
-----SS------S--------------S---------------------------------------------------
------------------------------------------------S---------S---------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
----------------------SSSSSSS--------S--S---------------------------------------
-------------------------S------------------------------------------------------
-------------------------S---------S--------------------------------------------
-----------------------------------------------------------S-----------------S--
------------------------------------------------------------------S-------------
------------------------------------------S-----S-------------------------------
-S-----------------------------S------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>forward_29
---------GCGGTGATCTTTCGTTGCTC---------------------------------------------------
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----
>reverse_1719
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--------------------------------------CGCGGCCATCTTCTCAGATT----------------------
--------------------------------------------------------------------------------
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----
>forward_1221
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-ATGCTCAGCGAGGTATGTCG-----------------------------------------------------------
--------------------------------------------------------------------------------
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----
>reverse_3181
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------TGTCTTCTTCTGCTCGGACG
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----
>forward_1242
--------------------------------------------------------------------------------
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----------------------TGTGTGTACCTCTGCTGCAG--------------------------------------
--------------------------------------------------------------------------------
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----
>reverse_3277
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TGTG
TACAGCTACGGCATGG----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----
>forward_1733
--------------------------------------------------------------------------------
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---------------------------------TTCTTCGCGGCCATCTTCTC---------------------------
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----
>reverse_3400
--------------------------------------------------------------------------------
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---------------------------------------CATGGACCCTGGCCTGAG-----------------------
--------------------------------------------------------------------------------
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----
>forward_2910
--------------------------------------------------------------------------------
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----------AGTATGCTCCAAACGGCACC--------------------------------------------------
--------------------------------------------------------------------------------
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----
>reverse_4198
--------------------------------------------------------------------------------
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-------------------------------------AGTTTGGCGCAGCAACAAAA-----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
