>input_sequence_27235
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--------------------------------------------------------ATGGTGAGTTCATCACTAGCTTTT
TATGCGCTCCTTTTTCTCTGTTCTTTTGATGTTGTA-CTTAGGTAGCATGTCAAGGAAGATTAGGCGGAGATTATATTAG
GTATCGTGCCTAACAGACTCCAAATTTTGGTTTGATGTGATAAACAGGGTGAAGAGGCTCCTGAGTTTCGCGTTGACCGC
ATCACCTTGGGGTCCAAGGATTGCCAAGAGAATGCCATAGTTGTTGGCGATAAGACGGCGAGTCCCTTGAATAAGTCAAC
TCATATACATATGCTTTCAATTTGATTTTAGATATGATTGACTGCCACTATTT-CTTGTTCATAGTTGTTGAAGCTATCA
CCTCTATTATGTTACTTAAAAATTAATAAGA-TTGAGCTTAGAAAGCTGGCAACTGTTTTGCATCTTTTTGGCGATATCA
TGTTGGTTTTGATAGAGATGTAACAAGAATGTGTTGTGCTAGTATTGGAACATCAAGGAAGATATGACACCCATT-TATT
TTGAGATCAAAAGGAGAGCTGAGCTGTTTGTTTCATTAATAATTATAAAGTTACTGTAGGTTTAATATATGGTACCAAAT
GACTTTCTTGTACTTATCTGGCTCACTGGCTGCACTAACTTACACCTACTGTTTTCCATATGTTCAGTAAAATAATCTTT
TCCCATGTAGCTGTAGTGTTTATCATACTAAGGAGCACTCTAAACTATAAAGCTAGATTGTAACAACATTTTCTTTTTTT
GCAGTATGTAATTGGCAGAACAGATGATGACTCAAAGTCATCCTTTGGCATCAAAATTCTGGACAAACTAACTCAGACCT
GGTATTGTACTTTTCATTTTTGTTCTTGTCGTCCCTATAATTTCCTTGGTTTTTAGTGGATGGTCATTCGACTATTTGTT
TTGTGGCAGGATTGTGCCGACAGTACTTGGAGCGCAGCCTCCATCCAAGTCACACTCAGCAATTCTTATAAATGAGGAGA
AGATATTGGTTGTTGAGAAGGGTGTTTCCTTGAATGATTCCATCTGGTTCCTTGAGGTAAACATTACCTAGATTGACAAA
GAATTGCTATCCTTCTTGGTCTGTCTATTGCTCTTACTTTACAAAAATATAGAGGAAGGTTTTTTTCACCTTTTTAATGG
TGGGCCTGGGGAGCTTCAAGTAAACACACGATGC-----------------------------------------AGTGG
TCTTTTTGGTTTGTGCCATCTCACGATGCAGTGTTGTTTGGTTTTTA---ATGTACTTCGTCTTACTGGCAAGCCAGAAC
TGTATTAGTGGCATGATGGTAACTGGTATCGTGTCTTAGCCCATCTATTGTTCAGTAAATGTAGATCTCTGTTTCTCTCT
C------------------------TGTGTGTGTGTGTGTGTAGCACAGGGTATAGTAGACGTCGTATATTTTTGCGTGA
CAATATTTCATGATTATTAATTTTCCTTTTTATTATTTGACCTGTCTGAGCTCACCCTCTTTTTCTTTACATCTTCAGAT
AGATACCCCCTTTGTTAAACAACAGCGGAAAATCAAGGGTTCAGAAGTTGTTTCCTGGAGCAAGGGAGTACTTGGTGTCG
CCCAAAAACCAGTTGTGATTAGTGGGCCATCTGGTGTTGGTAAAGGGACGCTAATAGCAAAATTGATGAAAGAGTACCCA
TCGAAATTTGGGTTCTCTGTTAGCCACACTACAAGGTCTCCAAGGGTGAAGGAAATAGATGGTGTCCACTACCATTTTGC
TGGAAGAAGCAAGATGGAACAAGATATAAGTGAGGGGGAATTCCTTGAATTTGCTCATGTTCATGGAAATCTCTATGGGA
CGAGTATTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGGTAAAATCACTTCCACTTCTATACTAGTTTCTGAAAGGT
GAATTATTCATCTTTCCATTGCTTTTCATTGAAGAGGTGCATTCTCGACATTGATGTCCAAGGAGCACGATCTGTGAGGG
CTTCTTCTCTTGAAGCAATATTCATCTTTGTATGCCCTCCGTCATTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGTAT
ATTTGTAGATTATAGTATTTATGCATTGATAGCCTTAAGC-TTCTTTGTTTGATAATTCAGTTACAACATTATAAAGTGA
AGATATGCTTCATTTACACTCTGGTCAATTGGTTATACAGGGGCACAGAAACAGAGGAACAAATCCAAAAGCGACTTAGA
AATGCTCGTGCTGAGCTTGACCAGTCCAATTCACCAGGTCTTTTTGATCATCTTTTGGTAAATGATAACCTTGAAGCATG
CTATGAGAATTTGAAGGTAGTTACACAGCTCACTGGTTACATAAGCTTTCCTTGCCTGATTTTTTGAATGCAAGGCACTG
TCATCGCCCCCTTTTCTTTGTATTAAATTATTATTGCAACCTGCAGAAGTTGCTTTCATTGGATGATGACCACAAAGATT
CAGATGGTTGTTGTAAGTTATATGAAACTTCCTATTTCCAATGTATTATAATGCTTCATTGCGTCAAATTTTAATGTTAA
ATCTTGCT----GTGCTTCAGTCATCGAGGATGGGAAAGCAACCGCATGTTATTCTATCATGTCCAAAACAGAGTCAGAA
GTTTTTTTGCAATCTGAAACTGGCGAAGTAGTAAAAGCAGCTGCAAACTTGTAAGTCACCTTGCCCCTTCTTCTATGTAT
TGCGATGGTGTTAACTAATGATATGATTCTTACTCGTGCATGTTCGAATTTTTCAACAGGCTAGCAGTCGACTTATCCTC
TCTCACAGGTGGCGCTCCTGGACGAACAAGAGGTCTTAAGATACACTCAATTAACTCCATTGACAACTGTCTGAAGGGCA
TTAGATAA------------------------------------------------------------------------
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>chr5D_1_TraesCS5D01G112800
CAAACTGG------------------------------------------------------------------------
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-----------------------------------------------------------AGCTATGGTTCTCCAATGCTT
CAGATGGACCTCAAACTTTCCTT-TTCCCTTTGCCCCTTATTGAATCGACTTCAGGTCGGTCTAACGTGCGAAGAAAGGG
CAAAAAAGGGTTAAGGCTGCCGTAGAAAAGGTCCAAACTATACTAGCCAGGGAAAGAAG---------------------
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--------CGATGCTCTAGGCCTAGGGGTTCGGGTCAAGACACAAGACCAGATCCACCGAATCCGACCAAAATAATGCAG
TTCCATCGATATAAAGGG----GAGAGAGGGGGGAAATGACAAGCGAAAAGG-GAAGGAGAAAAAGTTGTATAAAAACGC
CGCAGCCTCGCCGTCGCTTCTTCCCTGCAAAATTCCAATTCCAACCCGAGACCCAGAGGGCTCCTGCCCCCATTTGATCC
CTCCCCCCCTCCCTCCCTCCTCCCATCCCAGCGCCGC---CGCCTCGACCCCCTCCTTCCTCCGCGCTGACCGCCCCGTC
GCACCAGCCGCCGCCGCGGCGACATTCGTTACCGCGCTCGTTCGTTTCTCGGCCTCCAGCTCGGGGCGGCGCCGGGATCG
CGGGATCTCGTCGGGGAAGCGAGGTTTGTGTCCCGCCCGTATCTGGTTTTCGGCCCTGCACGGCTCGATTTAGGGTTTCC
TTGATTGTTCCTGGAATGGTCGCGACGGTGGTTGGTGCCTGGTTCTTAGGAAGACAACACCCCCTATTAGTGGCTGCGTT
TT----GTTGGATCTAGCCTTGGAATGGTAATGGCGCGTGATTAGTGTAGCTTTGGTCGCGTAGCCTGTCGTCCTCGTTG
TGGAAAGCTCGATTCCTGAAATGTGTGAGAGCAAATGAAAGGTTCGCTTCTTCTTTTGGCGGTGGATGTTGGGATGAATT
CATCCACTTGGGTCTTATTCTCTGAGTAAATCAATCTACTGTTTAAA-CTTTTTTTCCTGATCATTTGTTTATGCTCACT
TTTATGAATAGGA--CGCCAGGCTCGTCCCATCTGCTCCCGATCACGGCTTATTTTATGGTGAGTTCATCACTAGCTTTT
TATGCGCTCCTTTTTCTCTGTTCTTTTGATGTTGTA-CTTAGGTAGCATGTCAAGGAAGATTAGGCGGAGATTATATTAG
GTATCGTGCCTAACAGACTCCAAATTTTGGTTTGATGTGATAAACAGGGTGAAGAGGCTCCTGAGTTTCGCGTTGACCGC
ATCACCTTGGGGTCCAAGGATTGCCAAGAGAATGCCATAGTTGTTGGCGATAAGACGGCGAGTCCCTTGAATAAGTCAAC
TCATATACATATGCTTTCAATTTGATTTTAGATATGATTGACTGCCACTATTT-CTTGTTCATAGTTGTTGAAGCTATCA
CCTCTATTATGTTACTTAAAAATTAATAAGA-TTGAGCTTAGAAAGCTGGCAACTGTTTTGCATCTTTTTGGCGATATCA
TGTTGGTTTTGATAGAGATGTAACAAGAATGTGTTGTGCTAGTATTGGAACATCAAGGAAGATATGACACCCATT-TATT
TTGAGATCAAAAGGAGAGCTGAGCTGTTTGTTTCATTAATAATTATAAAGTTACTGTAGGTTTAATATATGGTACCAAAT
GACTTTCTTGTACTTATCTGGCTCACTGGCTGCACTAACTTACACCTACTGTTTTCCATATGTTCAGTAAAATAATCTTT
TCCCATGTAGCTGTAGTGTTTATCATACTAAGGAGCACTCTAAACTATAAAGCTAGATTGTAACAACATTTTCTTTTTTT
GCAGTATGTAATTGGCAGAACAGATGATGACTCAAAGTCATCCTTTGGCATCAAAATTCTGGACAAACTAACTCAGACCT
GGTATTGTACTTTTCATTTTTGTTCTTGTCGTCCCTATAATTTCCTTGGTTTTTAGTGGATGGTCATTCGACTATTTGTT
TTGTGGCAGGATTGTGCCGACAGTACTTGGAGCGCAGCCTCCATCCAAGTCACACTCAGCAATTCTTATAAATGAGGAGA
AGATATTGGTTGTTGAGAAGGGTGTTTCCTTGAATGATTCCATCTGGTTCCTTGAGGTAAACATTACCTAGATTGACAAA
GAATTGCTATCCTTCTTGGTCTGTCTATTGCTCTTACTTTACAAAAATATAGAGGAAGGTTTTTTTCACCTTTTTAATGG
TGGGCCTGGGGAGCTTCAAGTAAACACACGATGC-----------------------------------------AGTGG
TCTTTTTGGTTTGTGCCATCTCACGATGCAGTGTTGTTTGGTTTTTA---ATGTACTTCGTCTTACTGGCAAGCCAGAAC
TGTATTAGTGGCATGATGGTAACTGGTATCGTGTCTTAGCCCATCTATTGTTCAGTAAATGTAGATCTCTGTTTCTCTCT
C------------------------TGTGTGTGTGTGTGTGTAGCACAGGGTATAGTAGACGTCGTATATTTTTGCGTGA
CAATATTTCATGATTATTAATTTTCCTTTTTATTATTTGACCTGTCTGAGCTCACCCTCTTTTTCTTTACATCTTCAGAT
AGATACCCCCTTTGTTAAACAACAGCGGAAAATCAAGGGTTCAGAAGTTGTTTCCTGGAGCAAGGGAGTACTTGGTGTCG
CCCAAAAACCAGTTGTGATTAGTGGGCCATCTGGTGTTGGTAAAGGGACGCTAATAGCAAAATTGATGAAAGAGTACCCA
TCGAAATTTGGGTTCTCTGTTAGCCACACTACAAGGTCTCCAAGGGTGAAGGAAATAGATGGTGTCCACTACCATTTTGC
TGGAAGAAGCAAGATGGAACAAGATATAAGTGAGGGGGAATTCCTTGAATTTGCTCATGTTCATGGAAATCTCTATGGGA
CGAGTATTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGGTAAAATCACTTCCACTTCTATACTAGTTTCTGAAAGGT
GAATTATTCATCTTTCCATTGCTTTTCATTGAAGAGGTGCATTCTCGACATTGATGTCCAAGGAGCACGATCTGTGAGGG
CTTCTTCTCTTGAAGCAATATTCATCTTTGTATGCCCTCCGTCATTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGTAT
ATTTGTAGATTATAGTATTTATGCATTGATAGCCTTAAGC-TTCTTTGTTTGATAATTCAGTTACAACATTATAAAGTGA
AGATATGCTTCATTTACACTCTGGTCAATTGGTTATACAGGGGCACAGAAACAGAGGAACAAATCCAAAAGCGACTTAGA
AATGCTCGTGCTGAGCTTGACCAGTCCAATTCACCAGGTCTTTTTGATCATCTTTTGGTAAATGATAACCTTGAAGCATG
CTATGAGAATTTGAAGGTAGTTACACAGCTCACTGGTTACATAAGCTTTCCTTGCCTGATTTTTTGAATGCAAGGCACTG
TCATCGCCCCCTTTTCTTTGTATTAAATTATTATTGCAACCTGCAGAAGTTGCTTTCATTGGATGATGACCACAAAGATT
CAGATGGTTGTTGTAAGTTATATGAAACTTCCTATTTCCAATGTATTATAATGCTTCATTGCGTCAAATTTTAATGTTAA
ATCTTGCT----GTGCTTCAGTCATCGAGGATGGGAAAGCAACCGCATGTTATTCTATCATGTCCAAAACAGAGTCAGAA
GTTTTTTTGCAATCTGAAACTGGCGAAGTAGTAAAAGCAGCTGCAAACTTGTAAGTCACCTTGCCCCTTCTTCTATGTAT
TGCGATGGTGTTAACTAATGATATGATTCTTACTCGTGCATGTTCGAATTTTTCAACAGGCTAGCAGTCGACTTATCCTC
TCTCACAGGTGGCGCTCCTGGACGAACAAGAGGTCTTAAGATACACTCAATTAACTCCATTGACAACTGTCTGAAGGGCA
TTAGATAACCCAAAACATTCTTACAAACGATGTCGCAGAAGTGTTGACTGATGGATTTTGGATCAATTAGTGAGGTATAA
CAGCTTCAGAAACATATTAGTTAGAGAAAAAGCAAAACATA--AGGGATTTATTTCCATTTATCATTTGTTTGCCGGAGA
GGCGCTTCGTTTGTTCTTTGTACCAGAATGA---------ATGCCAGAGGGATTGTACCTCTTATTGTTGAGGGTTTGTG
TACCTTATATTTGTTCAGTGGAACATATGTCGAGGGCCTATCCCAACCATGTTTTGTTTGTTTGCAAGAATGAAGAAATC
AGGTGATGTTATAATGTTAGTTCAATTGCTGCAAATGCATTCCTGTTGCTTTAAATACTAATATGCAGAACCTGTCTTGG
TTATCATGAGGAGTTTCAGAACTTGCCTTGTGTGGAAACTGTGACCCTGTTCTACACATGTACTCCCTCTTTTATTTATT
T------ATTTCGCATATGAACTTTGACCTAAGTCAAACTTT---------GATCAAATTTTCTTTTGACAGTCTAAACT
TTCACAAAAAA-ATATGTGGTATAAAAATATATTGAATGATGATTTTAATGACATTGATTTGGTATTGTGGATGTTAATT
TTTTTATATACTCTCTTCGTCCCAAAATTCTTGTCTTAGATTTGTCTAAATACAGATGTATCTAACTAATTCAAGACAAG
AATTTTGGGACGGAGGAAGTATAAACTTAGTCAAAGTTTAGAAGTTTGACCCGAGACAAGGCTACCATGCGAAGTAAATA
CATACTCATGAATATATGTAGCACTAACTTGATGAGTAGGGCGTTTCGGTGCCCATGCTCATCTTCACCTGGTTAGAAAA
CAATTTGTAAAAAATTCAAAACAAAATAAAAAAGTTCCAACTTTTTTTTATGCATAGACAATTTGATGCGTGAGACTCGC
TCTAAATTTCAAGTTATTTGGACATCTGAGCAGCTTTCAACAAAGAAGACAAATTGGGCCAAAACAGTAAACATA
>chr5A_2
ATGGTTCTCCAATACTTTAGATGGACCTCAAACTTTCCTTTTCCCTTTGCCCCTTACAGAAGAAAACCTACTGAGAACCC
TAATAATGTTTCTATTTCTGATGCTAAAACTCAGGAGCGTGAAGAGCATGAACCTAGTCAGGATAATGATAATAACGATG
ATGATAATGATGCTACACCTAATGATAATAATGAACCTGAAAAGGAGGTAGAGGTAGAACCTGAAGTAGAACTTGATGAC
CCACCTCCAAGGAATAAAAGATATGATAAAAGAGATTATGTTGCTAGGAAACATGGTAGAGAAATGGAACCATGAGTACA
AAAGCCTATGCCTTTTCCTAATAGGACATTGAAATCTAAAGATGAAGACATTTAACCAATTTGTTGAATTACTTAGACCT
CTTTGCCTTCATGTTCCTTTGATCAGTGATATTAAAATGCCTCCTTATTACAAGTACATGAAAGATATTGTTACTAAAAA
AAGGAAAATACCTGAAGCTCAAACAATGCAAACATGGGGGATATTGTTACTAACAATGCAAACAAACCATGAGCCACAAA
TAAGAACATGACCGATAAAGGGGGATCAAGTTCGCAATCCATGAGTACAAAAGCCTATGTCTTTTCTGTGCATTTTGTCC
TCACTCGTGCGTGCCTGAGAGCAACTTCCCGGTTGGTCATCCATTCTTAAATCGCTCCAAGCCAAACAAGCTTAATTTTA
GAGTTCTTTTCGAATGGGCTCCAAAAAAAGAAGAAATTCCTTATTGATATGAGTAGCCTATGATTCCTATTAAGCTAGAC
TCTCACACCACATGCTGGTTCGTTCAAATCCAAGCAGACTACATTAAATTTCAGGAAGTATCACAACAAGGTAACACAAG
TCATTATCCAGCTTACCCACCTGTGAGCAAAGCCCAACTTTCACATCGCTCGCTCCAAGAACACCAAATCCACATGAGCA
TTGGCCTCGAACAGATCCAACTTATAAGCACAATAACTATTGTGCATAGGGTTTTCGCATGCTGAATATAATGCAAAGAT
TCAAAAGACAATAAGGATAAGGCGGCAAGGACGGATGCACTCCGAAACACATGGGTTGACCAATGCTAGGGAGAAATAGA
AGTAGATATGAATATGACAAAACTTGATAACAATTCAAGCAAGCACTATATATCTTTTGGCCATGACATAATCAACATCT
CAGTGCCAAACATATATAATTAGGAAATATATGCGGACATGACACTGCAAAAAGAACGGCGCGGAAAGAACGGCGCTTCT
CTAGCGTCATTCGTCAAACTCTAGCCACGGTTTCCCCTCAAAAAAAAAAAAAAAACTCTAGCCACGGTTCTCCAATGCTT
GAGATGGACCTCAGACTTTACTT-TTCCCTTTGCCCCTTATTGAATCGACCTCAGGTCGGTCTAACGTGCGAAGAAAGGG
CAAAAAAGGGTTA-GGCTGGCGTAGAAAAGGTCCAAACTATACTAGCCAGGGAAAGAAG---------------------
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--------CGATGCTCTAGGCCTAGGGGTTCGGGTCAAGACACAAGACCAGATCCACGGAATCCGACCAAAATAATGCAG
TTCCATCGATATAAAGGAGAGAGAGAGAGGGGAGAAATGAAAAGCGAAAAGG-GGAGGAGAAAAAGTTGTATAAAAACGC
CGCAGCCTCGCCGTCGCTTCTTCCCTGCCAAATTCCAATTCCAACCCGAGA------GGGCTCCTGCCCCCGTTTGATCC
CTCCCCTCCCTCCCCCCTCCTCCCATCCCAGCGCCGCCGCCGCCTCGACCCCCTCCTTCCTCCGCGCTGACCGCCCCGTC
GCACCAGCCGCCGCCGCGGCGACATTCATTACCGCGTTCCTTCGTTTCTCGGCCTCCAGCTCGGGGCGGCGCCGGGATCG
CGGGATCTCGTCGGGGAAGCCAGGTTTGTGCCC-GG-CGTATCTGGTTTTCGGTCCTGCACGGCTCGATTTAGGGTTTCC
TTGATTGTTCCTGGAATGGTCGCGACGGTGGTTGGTGCCTGGTTCTTAGGAAGACGGCACCCCCTA----TGGCTGCGTT
TT----GTTGGATCTAGCCTTGGAATGGTAATGGCGCGTGATTAGTGTAGC-TTGGTCGCGTAGCCTGTCGTCCTCGTTG
CGGAAAGCTCGATTCCTGAAATGTGTGAGAGCAAATGAAAGGTTCGCTTCTTCTTTTGGCGGTGGATGTTGGGATGAATT
CATCCACCTGGGTCTTATTCTCTGAGTAAATCAATCTACTGTTTAAAATA-TTTTTCCTGATCATTTGTCTATGCTCACT
TTTATGAACAGGACGCGCCAGGCTCGTAGCATCTGCTCCCGATCACGGCTTATTTTATGGTGAGTTCATCACTAGCTTTT
TGTGCGCTCCTTTTTCTCTGTTCTTTTGATGTTGTAAGTTAGGTAGCATGTCAAGGAAGATTAGGCGGAGATTATATTAG
GTATCATGCCTAACAGAGTCCAAATTTTGGTTTGATGTGATAAACAGGGTGAAGAGGCTCCTGAGTTTCGCGTTGACCGC
ATCACCTTGGGGTCCAAGGATTGCCAACAGAATGCCATAGTTGTTGGCGATAAGACAGTGAGTCCCTTGAATAAGTCAAC
TCATATACATATGCTTTCAATTTGATTTTAGATATGTTTGACTGCCACTATTT-CTTGTTCATAGTTATTGAAGTCACCA
CCTCTATTATGTTGCTTGCAAATTAACAAGATTTGAGCTTAGAAAGCTGGCAACAGTTTTGCATCTTTGTGGCGAGATCA
TGTTGGTTTTGGTAGAGATGTTGCAAGAATGTGTTGCGCTAGAATTGGAACAGCAAGCAAGATATGCCATCCTTTTTATT
TTGAGATCAAAAGGAGAGCTGAGCTGTTTGTTTCATTAATAATTATAAAGTTACTGTAGGTATAATGTATGGTACCGAAT
GACCTTCCTGTACTTATCTGGCTCACTGGCTGCACCAACTTACACCTACTGTTTCCCATATCTTCAGTAAAATAATCTTT
TCCCATGTAGCTGCAATGTTTATCATACCAAGGAGCACCCTAAAGTATAAAGCTAGATTGTAACAACACTTT-TTTTTTT
GCAGTATGTAATTGGCAGAACAGATGATGACTCAAAGTCAACCTTTGGCATTAAAATTCTGGACAAACTAACTCAGACTT
GGTATAGTACTTCTCATTTTTGTTCTTGCCATTTTTATAATTTTCTTGGTTCTTAGTGGATGGTCATTCAACTATTTCTT
TTGTGGCAGGATTGTGCCGACAGTACTTGGAGCACAGCCTCCATCCAAGTCGCACTCAGCAATTCTTGTAAATGAGGAGA
AGATATTGGTTGTTGAGAAGGGCATTTCCTTGAATGATTCCATCTGGTTCCTTGAGGTAA-CATTACCTAGATTGACAAA
GA---GCTATCCTTCTTGGTCCGTCTAGTGTTCTTACTTTACAAAAATACAGAGGAAGGATTTGTTCACCTTTTTAATGG
TGGGCCTGGTGAGCTTCAAGTAAACTTGATAA--TCTTTGGTTGCCTACACAAACTCAGAGTTACAAACTGAAAAAGTGG
TCTTTTTGGTTTGTGCTATCTCACGATGCAGTGTTGTTTGTTTTGTAATGATGTACTTCGTCTTACTGGCAAGCCAGAAC
TGTATTAGTGGCATGATGGTAACTGGTATCGTGTCTTAGCTCATCTATTGTTCAGTAAATGTAGATCTCTCTTTCTGTGT
GTGTGGGGGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCACAGGGTATAGTAGACACTGTATATTTTTGCGTGA
CAATATTTCATGATTATTAATTTTCATTTTTACTAATTGACCTGTCTGAGCTCACCCTCTTTTTCTTTACATCT-CAGAT
AGATACCCCCTTTGTTAAACAACAGCGGAAAATCAAGGGTTCAGAAGTTGTTTCCTGGAGCAAGGGAGTACTTGGCGTTG
CCCAAAAACCAGTTGTGATTAGTGGGCCATCTGGTGTTGGTAAAGGGACGCTGATAGCAAAATTGATGAAAGAGTACCCA
TTGAAATTTGGGTTCTCTGTTAGCCACACTACAAGGTCTCCAAGGGTGAAGGAAATAGATGGTGTCCACTACCATTTTGC
TGGAAGAAGCAAGATGGAACAAGACATAAGTGAGGGGGAATTCCTTGAATTTGCTCATGTTCATGGAAATCTCTATGGGA
CGAGTATTGAAGCAGTTGAATCTGTTACTGACGAGGGGAAGGTAAAATCACTTCCACTTCTATACTAGTTTCTGAAAGGT
GAGTTATTCATCTTTCCATTGCTTTTCATTGAAGAGGTGCATTCTCGACATTGATGTCCAAGGAGCACGATCTGTGAGGG
CTTCTTCTCTTGAAGCAAAATTCATCTTTGTATGCCCTCCGTCATTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGTAT
ATTTGTAGATTATAGTATTTATGCATTGATAGCCTTAAGCTTTCTTTGTTTGATAATTCAGTTACAACATTATAAGGTGA
AGATATGCTTCATTGACACTCTGGTCAATTGGTTATACAGGGGCACAGAAACAGAGGAACAAATCCAAAAGCGTCTAAGG
AATGCTCGTGCTGAGCTTGACCAGTCCAATTCACCAGGTCTTTTTGATCATCTTTTGGTGAATGATAACCTTGAATCATG
CTATGAGAATTTGAAGGTAGTTACACAGCTCACTGGTTACATAAGCTTTCCTTGCCTGGTTTTTTGAATGCAAGGCACTG
TCATCGCGCCCTTTTCTTTGTATTAAATTATTATTGCAACCTGCAGAAGTTGCTTTCACTGGATGATGACCACAAAGATT
CAGATGGTTGTTGTAAGTTACATGAAACTTCCTATTTCCAATTATTATTAATGCTTCATTGCGTCAAATTTTAATGTTAA
ATC----T----GTGCTTCAGTCATCGAGGATGGGAAAGCAACTGCATGTTATTCTATCCTGTCCAAAACAGAGTCAGAA
GTTTTTTTGCAATCTGAAACTGGCGAAGTAGTAAAAGGAGCTGCAAGCTTGTAAGTCACCTTGCCCCTTCT---ATGTAT
TGCGTTGGTGTTAACTAATGATATGATTCTTACTCGTGCATGTTCGAATTTTTGAACAGGCTGGCGGTCGACTTATCCTC
TCTCACAGGTGGTGCTCCTGGACGAACAAGAGGTCTTAAGATACACTCAATTAACTCAATTGACAATGGTCTGAAGGGCA
TTAGATAACCCAAAACATTCTTACAAACGATGTCGCAGAAGTGTTAACTGATGGATTTTGGATCAATTAGTGAGATATAA
CAGCTTCAGAAACATATTAGTTAGAGAAA--GGAAAACATAAGAGGGATTTATTTCCATTTATCATTTGTTTGCCGGAGA
GGCGCTTTGTTTGTTCTTTGTACCAGAAAGAGGTGAAGTCATGCCAGAGGGATTGTACCTCTTATTGTTGAGGGTTTGTG
TACCTTATATTTGTTCAGTGGAACATATGTCGAGGGCCTATCTGAACCATGTTTTGTTTGTCTGCGAGAATGAAGAAATC
AGGTGATGTTATAATGTTAGTCCAATTGCTGCAAATGCATTCCTGTTTCTTTAAATCCTAATATTCAGAACCTGTCTTGG
TTATCATGAGGAGTTTCAGAACTTGCCTT-TGTGGAAATTGTGACCCTGTTCTACACATGTACTCCCTCCGTT-TTTATT
T------ATTTCACATATGAACTTTGACCTAGGTCAAACTTGGTAAACTTAGATCAAGTTTTCTT---ACAATCTAAACT
TTCACAAAAAATATCTATGGTATGAAAATA--------------------------------------------------
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>chr5B_13
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---------------------------------------------------------------ATGGTTCTCCAATGCTT
CAGATGGACCTCAAACTTTCCTTTTTCCCTTTGCTCCTTATTGAATCGACCTCAGGTCGGTCTAACGTGCGAAGAAAGGG
CAAAAAAGGGTTAAGGCTGCCGTAGAAAAGGTCCAAACTATACTAGCCAGGGAAAGAAGGAGGTAATAGCACCAGGAGTC
CCACAACTTGTCCTGGATGTGATGATTTGGTCCCAATCTTGCAAAAGGCAACTATTAAGTCACACAACTTGCAGCCAATG
TGCAAATTTGGTCCCAACCAATCAGAGCACTACAAGTGGAGCCTAGTCAGCACAGCCGATCAGCACAGCGCATTTTGCAT
TTACCCCCTGGACTTAGCACTAATCAACCCGCACTACAAGTGGAGGAAGAGCTGGATCCTTCACTCCAAGACACCATGGC
GGCGAGGAAGAAGGAACGGTAGTATACCTCCGAGGCCGCCGCCGCCGCCGTGGGGCACGCCGTGGGGGTAGTAGCTGTAG
GTAATGTAGCACTTGTCGAGGTAGACCTGGCCGGAGGGGGCGCCGCCGCACTCGACGGCGACGCGCTGCACGGCTTGGGT
GACGCAGTTGCTGCAGTCGACGTTGGAGAGGTCGCCCTCGCACTGCGCCAGCGCGTACACCTGCTGGAAGCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCGCGACGCAGGAGGAGCAGTCCGGGCCGGAGAGGTCGCCGCGGC
ACTGGAAGAGGCCGAAGACGGAGGCGGAGGCCGACTGCGCGGCGAGCGCGGAGGAGAGCGCCGCGACGGTGGGCGGCGGC
GCGCCCCCCGCGAAGGTCTGGTTGGCGCAGCCCTTGTAGACGACCGCGTAGAGGTCGGCGCACGACGCCGTCGACAGGAG
CAGGAGGAGCACGACGGCGAGGAGGAGGAGGAGGCGGAGGCGGCAGGGAATGCCGCCGGCGCCCATCTGGCCGCGCTCTG
GGGGTCTGTGTCGTCGGGCTCGGTGGTGCGCCGGAAGCAGAGCTCCGCTCTTCCTCCAAGACACCATGGCGGCGAGCTGG
ATCCAGCTCCTTCCTCCACTTGTAGTGCGGGTTGATTAGTGCTAAGTCCAGGGGGTAAATGCAAAATGCGCTGTGCTGAC
CGGCTGTGCTGACTAGGCTCCACTTGTAGTGCTCTGATTGGCTGGGACCAAATTTGCACATTGGCTGCAAGTTGTGTGAC
TCAATAATTGCCTTTTGTAAGATTGAGACCAAATCATCACATTCAGGACAAGTTGTGGGACTCCTGGTGCTATTACCTCG
CAAAGAAGCGATGCTCTAGGCCTAGGGGTTCGGGTCAAGACACAAGACCAGATCCACCGAATCCGACCAAAATAATGCGC
TTCCATCGATACAAAGGAGAGAGAGAGAGGGGAGAAATGAAAAGCGAAAAGGGGGAGGAGAAAAAGTTGTATAAAAACTC
CGCAGCCTCGCCGTCGCTTCTTCCCTGCCAAATTCCAATTCCAACCCGAGA------GGGCTCCTGCCCCTATTTGATCC
CTCCCCCC------------TCCCATCCCAGCGCCGT---CGCCTCGACCCCCTCCTTCCTCCGCGCTGACCGCCCCGTC
GCACCGGCCGCCGCCGCGGCGACATTCATTATCACGTTCGTTCGTTTCTCGGCCTCCAGCTCGGGGCGGCGCCGGGATCG
CGGGATCTCGTCGGGGAAGCGAGGTTTGTGCCC-GCCCGTATCTGGTTTTCGGTCCTGCACGGCTCGATTTAGGGTTTCC
TCGACTGTTCCTGGAATGGTCGCGACGGTGGTTGGTGCCTGGTTCTTAGGAAGGCGGCACCCCCTA----TTAGTGGCTG
CGTTTCGTTGGATCTAGCCTTGGAATGGTAATGGCGCGTGATTAGTATAGCTTTGGTCGCGTAGCCTGTCGTCCTCGTTG
TGGAAAGCTTGATTCCTGAAATGTGTGAGAGCAAATGAAAGGTTCGCTTCTTCTTTTGGCGGTGGATGTTGGGGTGAATT
CATCCACCTGGGACTTATACTCTGAGTAAATCAATCTACTGTTTAAACCTTTTTTTCCTGATCATTTGTTTATGCTCACT
TTTATGAATAGGA--CGCCAGGCTCGTAGCATCTGCTCCCGATCACGGCTTATTTTATGGTGAGTTCATCACTAGCTTTT
TATGCGCTCCTTTTTCTCTGTTCTTTTCATGTTGTA-GTTAGGTAGCATGTCAAGGAAGATTAGGCGGAGATTATATTAG
GTATCGTGCCTAACAGACTCCAAATTTTGGTTTGATGTGATAAACAGGGTGAAGAGGCTCCTGAGTTTCGCGTTGACCCC
ATCACCTTGGGGTCCAAGGATTGCCAACAGAATGCCATAGTTGTTGGCGATAAGACAGTGAGTCCCTTGAATAAGTCAAC
GCATATACATATGCTTTCAATTTGATTTTAGATATGTTTGACTGCCACTATTTTCTTGTTCATAGTTGTTGAAGCCATCA
CCTCTATTATGTTACTTACAAATTAATAAGA-TTGAGCTTAGAAAGCTGGCAACTGTTTTG----------GCGATATCA
CATTGGTTTTGGTAGAGATGTAACAAGAATGTGTTGTGCTAGTATTGGAACATCAAGCAAGATATGCCACC--TT-TTTT
TTGAGATCAAAAGGAGAGCTGAGCTGTTTGTTTCATTAATAATTATAAAGTTACTGTAGGTATAATATATGGTACCAAAT
GACCTTCTTGTACTTATCTGGCTCACTGGCTGCACTAACTTACACCTACTGTTTTCCATA--------------ATCTTT
TCCCATGTGGCTGTAGTGTTTATCATACTAAGGAGCACTCTAAACTATAAAGCTAGATTGTAACTACACTTTCTTTTTTT
GCAGTATGTAATTGGCAGAACAGATGATGACTCGAAGTCATCCTTTGGCATTAAAATTCTGGACAAACTAACTCAGACTT
GGTATTGTACTTCTCATTTTTGTTCTTGTCCTCCTTATAATTTCCTTGGTTTTTAGTGGATGGTCATTCGACTATTTTTC
TTGTGGCAGGATTGTGCCAACAGTACTTGGAGCACAGCCTCCATCCAAGTCACACTCAGCAATTCTTATAAATGAGGAGA
AGATATTGGTTGTTGAGAAGGGTGTTTCCTTGAATGATTCCATCTGGTTCCTTGAGGTAAACATTGCCTAGATTGACAAA
GAATTGCTATCCTTCTTCGTCTGTCTAGTGTTCTTACTTTACAAAATAATAGAGGATGGATTTGTTCATCTTTTTAATGG
TGGGCCTGGTGAGCTTCAAGTAAACTTGATACTCTCTTTGGTTGCCTACACAAACTCAGAGTTACAAACTGAAAAACTGG
TCTTTTTGGTTTGTGCTATCTCACGATGCAGTGTTGTTTGTTTTGTTATGATGTACTTCGTCTTACTGGCAAGCCAGAAC
TGTATTAGTGGCATGATGGTAACTGGTATCGTGTCTTAGCCCATCTATTGTTCAGTAAATGTAGATCTCTCTTTCTC---
---------------------------------TGTGTGTGTAGCACAGGTATAGTAGACT----TATATTTTTGCGGGA
CAATATTTCATGATTATTAATTTTCCTTTTTACAAATTGACCTGTCTGAGCTCACCCTCTTTTTCTTTACATCT-CAGAT
AGATACCCCCTTTGTTAAACAACAGCGGAAAATCAAGGGTTTAGAAGTTGTTTCCTGGAGCAAGGGAGTACTTGGCGTCG
CCCAAAAACCCGTTGTGATTAGTGGGCCATCTGGTGTTGGTAAAGGGACGCTAATAGCAAAATTGATGAAAGAGTACCCA
TCGAAATTTGGGTTCTCTGTTAGCCACACTACAAGGTCTCCAAGGGTGAAGGAAATAGATGGTGTCCACTACCATTTTGC
TGGAAGAAGCAAGATGGAACAAGATATAAGTGAGGGGGAATTCCTTGAATTTGCCCATGTTCATGGAAATCTCTATGGGA
CGAGTATTGAAGCAGTTGAATCTGTTACTGATGAGGGGAAGGTAAAATCACTTCCACTTCTATACTAGTTTCTGAAAGGT
GAGTTATTCATCTTTCCATTGCTTTTCATTGAAGAGGTGCATTCTCGACATTGATGTCCAAGGAGCACGATCTGTGAGGG
CTTCTTCTCTTGAAGCAATATTCATCTTTGTATGCCCTCCGTCATTCGAGGAACTAGAGAAGCGCCTTCGGGCACGGTAT
ATTTGTAGATTATAGTATTTATGCATTGATAGCCTTAAAC-TTCTTTGTTTGATAATTCAGTTACAACATTATAAAGTGA
AGATATGCTTCATTTACACTCTAGTCAATTGGTTATACAGGGGCACAGAAACGGAGGAGCAAATCCAAAAGCGACTAAGA
AATGCTCGTGCTGAGCTTGACCAGTCCAATTCACCAGGTCTTTTTGATCATCTTTTGGTAAATGATAACCTTGAAGCATG
CTATGAGAATTTGAAGGTAGTTACACAGCTCACTGGTTACATAAGCTTTCCTTGCCTGGTTTTTTGAATGCAAGGCACTG
TCATCGCGTCCTTTTCTTTGTATTAAATTATTATTGCAACCTGCAGAAGATGCTTTCGTTGGATGATGACCACAAAGATT
CAGATGGTTGTTGTAAGTTACATGAAACTTCCTATTTAC----------AATGCTTCATTGCGTCAAATTTTAATGTTAA
ATC----TTGCTGTGCTTCAGTCATCGAGGATGGGAAAGCAACCGCATGTTATTCTATCCTGTCCAAAACAGAGTCAGAA
GTTTTTTTGCAGTCTGAAACTGGCGAAGTAGTAAAAGGAGCTGCAAGCTTGTAAGTCACCTTGCCCCTTCTTCTATGTAT
TGCGATGGTATTAACTAATGATATGATTCTTACTCGTGCATGTTCGAACTTTTTAACAGGCTAGCGGTCGACTTATCCTC
TCTCACAGGTGGCGCTCCTGGACGAACAAGAGGTCTTAAGATACACTCAATTAACTCAATTGACAACGATCTGAAGGGCA
TTAGATAACCCAAAACATTCTTACAAACGATGTCGCAGAAGTGTTGACTGATGGATTTTGGATCAATTAGTGAGATATAA
CAGCTTCAGAAACATATTAGTTAGAGAAAAAGGAAAACATAAGTGGGATTTATTTCCATTTATCATTTGTTTGCCGGAGA
GGCGCTTCGTTTGTTCTTTGTACCAGAATGAGGTGAAGTCATGCCAGAGGGATTGTACCTCTTATTGTTGAGGGTTTGTG
TACCTTATATTTGTTCAGTGGAACATATGTCGAGGGCCTATCCGAACCATGTTTTGTTTGTCTGCGAGAATGAAGAAATC
AGGTGATGTTATAATGTTAGTTCAATTGCTGCAAATGCATTCCTGTTGCTTTAAATCCTAATATGCTGAACCTGTCTTGG
TTATCATGAGGAGTTTCAGAACTTGCCTTGTGTGGAAACTATGACCCTGTTCTACACATGTACTCCCTCCGTT-TTTGTT
TTTATTTATTCCGTATTTGAACTTTGACCCAGGTCAAACTTTGTAAACTTTGAT--AAGTTTTCTTTGACAATCTGAACT
TTCACAAAAAATATATATGAATG-AAAATATATTGAATGATGATTTTAATGGTATTGATTTGGTATTGTGGATGTTATTT
TTTTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
>SNPs
SSSSS-SS------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------S-----------------
--------------------------------------------------S-----------------------------
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-----------------S--------------S-------S-------------S-------------------------
----------------------------S----------------------SSSSSS-----------------------
---------SS--S------------------------------------------------------------------
---------------------------S--------S-------------------------------------------
------------------------------S--S-------------------S--------------------------
-------------------------------------------------------SS---------SSSS----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
---------------------------SS---------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------S-S---------------------
------------------------------------S--------------------------------------S----
------------------S-------------------------------------------------S-----------
-----------S---------------------------------------------S--------S-----S-------
-------------------------------------------------------------S------------------
---S---------------------------------------------------------S------------------
--------------------------------------------------------------------S-----------
---------------------------------------------------S--------------------------S-
------------S-----------------S---S------------------------------------------S--
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
---------------------------S--S----------------------------S---S----------------
---------S---------------SSSSS-SS-----------------------------------------------
----------------S-----------------------S---S-----------------------------------
----------------------------------------------------------------------S-------S-
S------------------------------------------------------------SSS----------------
--------------------------------S--S--------------------------------------S-----
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
-------S------------------------------------------------------------------------
--------------------S---------------------SSS-SS--------------------------------
---SSSS----------------------------------------------------S--------------------
-------------------------------------S--------S---------------------------------
-----------------------------------------------------S-----------S--------------
---------------------------------------------------------S---------S------------
--------------------------------------------------------------------------S-----
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S-----------------S---S--------------
--------------------------------------------------------S-----------------------
---------------------------------------------------------------------SS--S------
-------------------------------S---------------------------------------S--------
----------------S------S---------------------------SS------------------------S--
-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_3655
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-----------------------------------CAATTCCAACCCGAGACCCA-------------------------
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>reverse_5234
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---------------------------------GCAGCCTCCATCCAAGTCAC---------------------------
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>forward_3656
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------------------------------------AATTCCAACCCGAGACCCAG------------------------
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>reverse_5681
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CTGTGTGTGTGTGTGTGTAGC-----------------------------------------------------------
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>forward_3657
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-------------------------------------ATTCCAACCCGAGACCCAGA-----------------------
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>reverse_5742
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-------------------------------------------------------------GTCGTATATTTTTGCGTGA
CAATATT-------------------------------------------------------------------------
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>forward_3871
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------------GGGGAAGCGAGGTTTGTGT-------------------------------------------------
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>reverse_5916
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---------------------------------------------------------------------------TGTCG
CCCAAAAACCAGTTG-----------------------------------------------------------------
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>forward_3874
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--------------GGAAGCGAGGTTTGTGTCCC----------------------------------------------
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>reverse_6843
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------------------------------------------GTATTATAATGCTTCATTGCGTCAAA------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>forward_5561
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--------------------TCACGATGCAGTGTTGTTTGG---------------------------------------
--------------------------------------------------------------------------------
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>reverse_8051
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--------------------------------------------------GCCCATGCTCATCTTCACCT----------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------
