>input_sequence_27178
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----------------------------------------------ATGGCCGCCGCCGCCGCCGCGGATGAGCCGTGCC
GCTGCCACATTGTGGCGGTGCCGTTCCCCGGGAGGGGCCACGTCAACGCCATGATGAACCTGTCCCGCCTCCTCGCCGCG
CGCGGCGCCGCGGTCACCTTCGTCGTCACCGAGGAGTGGCTCGGCCTGCTCCGCTCCTC---CTCCTCCTCCGCCCCGCC
GCCGCCCGGCGTCCGCCTGCGCGCCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGCCGCCGACCACGCGGGCTTCC
TCGACGCCGTCGCCACCGAGATGGAGGCGCCCTTCGAGCTCCTGCTCGACCGCCTCCGGGA---------GGAGGAGGGG
GAG---GTCGCGGCGCTCGTGGCGGACACCTACGTGCCCTGGGTCGTGGGCGTCGGCAACCGGAGGGGCGTCCCGGTCTG
CTCGCTCTTCCCCATGCCCGCCTCCTTCTTCTCCGCCTACTACCACTTTGACTCCCTCCCGCCGCGCCTCGCCGACGAGC
ACGCCCCGGCCGCCGGCGCCGCTACAGGTCAGGTTCCTCTTCCAATACGTGCTGCTTCCAAGCATTT-------------
--------------------------------CTGATAGGCTGATACCACTCCCGACTGCTGAACCACTAGCACTACTGA
TT--------------ATTTCACTCAATTT-------------ATTTGTTGTTGCATCTAT----CACGTGTTGGATTTC
AAGAC---GCTACCATCTTATGTACTCCCTCCTTTCCGTTTTATACAGATCAATTCAATAATCTCACCATCCAAGATAGA
TGATAAGTGCTGGAATAATTTTTGTAGTTTGCAAAAGTACTCAATTAGTGCACTCGTTTTCCTCAAAAAGTTGTCTTTAC
CAATGCATTAATTGCAATGCATGCATGTTTGGCCAATAAATGACAAAGAAGCTTTACATACTCCCTCCGTCATGGTTTAG
AAGGCACAGTTGAATTTGCGTGTGTTTCCACAATAGACAAGGTTTAGGGCACATTGCATTTATTTCTAGTAGCTAATTAG
TACTCCGATATACTATTTCTATATGCATGCATAGTGTGAATGCTATTTTTTAGCCCATCCCACAACCAATAGATAATCAC
CTAGGTTCCAGAGAATTTCCAAGCGCGCCTTTTAAACCGTGACGGAGGGAGTACATTGGTGTGTTTTGTCATAATCCTTG
CATGCAAAGAGTTAATGCACATTGAAATCTGAACATGTGATGAGAAGTAGTAGAAATGAGACTTATAAAACTGAAAAACT
GAAATTTTGAGATGAGCCCTATAAACCGGAAGGGAGGTAGTA------------------------------CATATTCA
TGTTTATGCATGAGGGTACTACTCTCTCCGTCTCAAAACAGAATTTTGGGACGGAGGGAGTAGTACGTGGTAACTCTGCC
AAAATATATATATCCTGCAGAATGCCGACATACACGGATGCTCTCAATATTTCGCTGATTCAAGTATCATTGTTTGACTG
CTCCATTATTTATGTGCACATCCCCACGTAGTTTCAAGTGTTACGATGCCGGCAGCTGCATGTGCAAAGGACCAAGTGAC
CCGGAGCATGGTCAATAAACATTGCCAAACATGAAAATGACTAATTAATCACATGTAACTTCAAAGTGGGCATGTCTATT
TGTTTGTGGCACATGCTATTACTGGGAGAAAACTCACCGAAT--------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGACGGTCTAAATGCAG
TTTTGTTATGGATAGTCCAAATAGCCAGAACTGAGCCATAGATCAAGCTTTTTTTTTTTAGATTAGCCATAGATCAAGCT
TGAGAAATTGGTGTCGCATATGAGTATTGTTTTAACTGCACCACATGGTTCTCATTTCGGGTGATTTTATTTTTTT-ATA
GTCATTGTTATAGTGGATATAGTTTGTTCATTTCA------------------------------GTAATAG--ACATGG
CAGCTTGCAGCATTGCTCAGTCATCCTTTCTTTTCTGCAGATAA-----ATCTGATGAGAGACTTGAGCACTATATCTCA
GGCTTTGCTTCAAGTTCAGTGACCTTATCTGATCTGGAGCCCCTAATTCACAACAAGACAACAGTAAACCATGTCCTAGC
AGCTGTCTCTAGCATCAAGAACGCGCAATGCCTCCTATTCACCACTATGCACGAGCTCGAGGCCGGTGTCATCAACTCCC
TAAGATCAGCACTCCCATGTCCAGTTCTCCCAGTTGGGCCCTGCATTCCCTACATGACACTACAAGACCAGCATTCCAAG
TCCAATGGAGAAGTTGCCACCAGTCCAGGAGACTGCTTCACCTGGCTAGACTCTCAACCTGTGAACTCGGTGCTATATGT
CTCCCTCGGCAGCTTCCTCTCTGTGTCAGCCTCCCAGCTTGATGAGATAGCATTAGGCCTTGCATCAAGCGGTGTCAGGT
TCTTATGGATTCTTCGCGAAAAGTCTTCCCGGGTGCGAGAACTTGTTGGTGACACCGACAGGGGCATGATAATGGCATGG
TGTGATCAGTTGAAGGTTTTATGCCATCCTTCTGTTGGGGGCTTTCTGACACATTGTGGAATGAACTCGACACTTGAAGC
TGTCTTTGCTGGCGTGCCTATGCTTGCTCTACCACTGTTCTTTGATCAACCGATTGATGGTCGTCTGATTGTTGAAGACT
GGAAGGTTGGACTGGCCCTGCGCGAATGGGCCGATAAGGATGGCCTGATTGGGAGTCAGGACATTGCAAGGGCTGTTAAG
AGGCTCATGGCCTGTGATGAGTCCGATACCAAGGCGATAAGGAGGCGTGCCCTTGAGTGGAAAGAGGTCTGTGGCAGAGC
TGTTGAAGAGGGTGGATCTTCGTATGATAATCTCAGTTCATTGATGCAGATGGTATGCGAGTCACGATGTGCTGAACTCG
ATCAGCAATGTTCCAAAACTGATGCTTGA---------------------------------------------------
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----------------------------------------------------------------
>chr3A_1_TraesCS3A01G332900
GGTATCATAATATGATACTCCATCATCTCTTTCTTCATTTAATGCTATGACACATCATCAAAGTTGCCTAGTTGACATGC
ATGATACTATGATACTACCATTATGACCAGCCTTAGGCTGGTTACAATGGGGAGTATCATACATATGATACTAGTTTATG
ATACTATTATCCCTAATGAGGAGTA-----TGTTGGTATCATAGAGGACTATATTTATTGTCATGCATGACACAAAGTAG
CACATCATTTAATATAATA-GGTATCATGATATGATACTCAAGCCTCTCTTTCTTCGTTTAATTCTATACCACCTCATCA
AAATTGCTTAGTTGGCATGCATGATACTATCTATGATACTTTTATTACGGGCAGCTTAGTCACTCTGTCGTGAGGCCTCC
TCGCTACCTGTGCCACATATTACAGAGACGAGTGAAAAAAAGCAATACATGCGCGGCGTCCTACTACTCCCTCCTTTCCA
GTTTATAAGGCTCAATTCAAAAATCTCACCAACCAAAATAGTTGATGAGTGGTGAAATATTTTTTTGTAGTTTCCAAAAG
CACCCAATTAGTGCTTTTATTTTCCTTAAAAAATTATGTTTACGAATGCATTAATTGCAATGCACGCATAAAGTGCATGC
ATTGATCAGTTTTCTCTTAATACTTGCATGCAATGATTTAATGCACCTTGAAGTCTGAACATGTGATGGAAAACAATCAA
ATTAAGCCTTATAAAATAAAAAAACTAAATTTTTTAAATAAGCCTTGTAAACCGCTAAGGATGGAGTAGAAAAATTACTC
TCGTCGGCCGGGCAATAGAAAAGATGCTACGCGTCGCCGCAGATTCCTCCGCGCGCACGTTGGCGGCTGACACGAGAACC
AGATTCACCGCACCGCGCGCTCTGCTCACTGCTCACTCCAAACAAACATCGTCTGCGGCCTAGCCGCCTAGGCAACGACA
GCGCGACGAGAGCCACACACTCGTCACTTCGTCAGTCGTCACGGAGATGGCCGCCGCCGCCGCCGCGGATGAGCCGTGCC
GCTGCCACATTGTGGCGGTGCCGTTCCCCGGGAGGGGCCACGTCAACGCCATGATGAACCTGTCCCGCCTCCTCGCCGCG
CGCGGCGCCGCGGTCACCTTCGTCGTCACCGAGGAGTGGCTCGGCCTGCTCCGCTCCTC---CTCCTCCTCCGCCCCGCC
GCCGCCCGGCGTCCGCCTGCGCGCCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGCCGCCGACCACGCGGGCTTCC
TCGACGCCGTCGCCACCGAGATGGAGGCGCCCTTCGAGCTCCTGCTCGACCGCCTCCGGGA---------GGAGGAGGGG
GAG---GTCGCGGCGCTCGTGGCGGACACCTACGTGCCCTGGGTCGTGGGCGTCGGCAACCGGAGGGGCGTCCCGGTCTG
CTCGCTCTTCCCCATGCCCGCCTCCTTCTTCTCCGCCTACTACCACTTTGACTCCCTCCCGCCGCGCCTCGCCGACGAGC
ACGCCCCGGCCGCCGGCGCCGCTACAGGTCAGGTTCCTCTTCCAATACGTGCTGCTTCCAAGCATTT-------------
--------------------------------CTGATAGGCTGATACCACTCCCGACTGCTGAACCACTAGCACTACTGA
TT--------------ATTTCACTCAATTT-------------ATTTGTTGTTGCATCTAT----CACGTGTTGGATTTC
AAGAC---GCTACCATCTTATGTACTCCCTCCTTTCCGTTTTATACAGATCAATTCAATAATCTCACCATCCAAGATAGA
TGATAAGTGCTGGAATAATTTTTGTAGTTTGCAAAAGTACTCAATTAGTGCACTCGTTTTCCTCAAAAAGTTGTCTTTAC
CAATGCATTAATTGCAATGCATGCATGTTTGGCCAATAAATGACAAAGAAGCTTTACATACTCCCTCCGTCATGGTTTAG
AAGGCACAGTTGAATTTGCGTGTGTTTCCACAATAGACAAGGTTTAGGGCACATTGCATTTATTTCTAGTAGCTAATTAG
TACTCCGATATACTATTTCTATATGCATGCATAGTGTGAATGCTATTTTTTAGCCCATCCCACAACCAATAGATAATCAC
CTAGGTTCCAGAGAATTTCCAAGCGCGCCTTTTAAACCGTGACGGAGGGAGTACATTGGTGTGTTTTGTCATAATCCTTG
CATGCAAAGAGTTAATGCACATTGAAATCTGAACATGTGATGAGAAGTAGTAGAAATGAGACTTATAAAACTGAAAAACT
GAAATTTTGAGATGAGCCCTATAAACCGGAAGGGAGGTAGTA------------------------------CATATTCA
TGTTTATGCATGAGGGTACTACTCTCTCCGTCTCAAAACAGAATTTTGGGACGGAGGGAGTAGTACGTGGTAACTCTGCC
AAAATATATATATCCTGCAGAATGCCGACATACACGGATGCTCTCAATATTTCGCTGATTCAAGTATCATTGTTTGACTG
CTCCATTATTTATGTGCACATCCCCACGTAGTTTCAAGTGTTACGATGCCGGCAGCTGCATGTGCAAAGGACCAAGTGAC
CCGGAGCATGGTCAATAAACATTGCCAAACATGAAAATGACTAATTAATCACATGTAACTTCAAAGTGGGCATGTCTATT
TGTTTGTGGCACATGCTATTACTGGGAGAAAACTCACCGAAT--------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGACGGTCTAAATGCAG
TTTTGTTATGGATAGTCCAAATAGCCAGAACTGAGCCATAGATCAAGCTTTTTTTTTTTAGATTAGCCATAGATCAAGCT
TGAGAAATTGGTGTCGCATATGAGTATTGTTTTAACTGCACCACATGGTTCTCATTTCGGGTGATTTTATTTTTTT-ATA
GTCATTGTTATAGTGGATATAGTTTGTTCATTTCA------------------------------GTAATAG--ACATGG
CAGCTTGCAGCATTGCTCAGTCATCCTTTCTTTTCTGCAGATAA-----ATCTGATGAGAGACTTGAGCACTATATCTCA
GGCTTTGCTTCAAGTTCAGTGACCTTATCTGATCTGGAGCCCCTAATTCACAACAAGACAACAGTAAACCATGTCCTAGC
AGCTGTCTCTAGCATCAAGAACGCGCAATGCCTCCTATTCACCACTATGCACGAGCTCGAGGCCGGTGTCATCAACTCCC
TAAGATCAGCACTCCCATGTCCAGTTCTCCCAGTTGGGCCCTGCATTCCCTACATGACACTACAAGACCAGCATTCCAAG
TCCAATGGAGAAGTTGCCACCAGTCCAGGAGACTGCTTCACCTGGCTAGACTCTCAACCTGTGAACTCGGTGCTATATGT
CTCCCTCGGCAGCTTCCTCTCTGTGTCAGCCTCCCAGCTTGATGAGATAGCATTAGGCCTTGCATCAAGCGGTGTCAGGT
TCTTATGGATTCTTCGCGAAAAGTCTTCCCGGGTGCGAGAACTTGTTGGTGACACCGACAGGGGCATGATAATGGCATGG
TGTGATCAGTTGAAGGTTTTATGCCATCCTTCTGTTGGGGGCTTTCTGACACATTGTGGAATGAACTCGACACTTGAAGC
TGTCTTTGCTGGCGTGCCTATGCTTGCTCTACCACTGTTCTTTGATCAACCGATTGATGGTCGTCTGATTGTTGAAGACT
GGAAGGTTGGACTGGCCCTGCGCGAATGGGCCGATAAGGATGGCCTGATTGGGAGTCAGGACATTGCAAGGGCTGTTAAG
AGGCTCATGGCCTGTGATGAGTCCGATACCAAGGCGATAAGGAGGCGTGCCCTTGAGTGGAAAGAGGTCTGTGGCAGAGC
TGTTGAAGAGGGTGGATCTTCGTATGATAATCTCAGTTCATTGATGCAGATGGTATGCGAGTCACGATGTGCTGAACTCG
ATCAGCAATGTTCCAAAACTGATGCTTGAAATGCATCATCT---------------------------------------
--------------------------------------------------------------------------------
-------------------ATTCAAATGTTGTCTGAGTGTAGTTTTGATGGGAGAGC---TACGGTTTCTGGCAGAGCTG
TCAAAGGATCTCAATTCATTGTCCTGAACTCACTCAGCCATTTGGTTTCATTGTTCTTGTATCTTCCATTCATTGTCCTG
AACTCAATGAGCCATTTGGTTTCATTATTCTAAGACTACTTGTGCAAATAAGGTT-------------------------
----CAGAATATGAAGGTGCAAATATGTGTTAAAAATAAGCTGGTGTTAA--------AAATAAGGAGGAAATTCAGAAG
GACAGAGAGTCGAAAAAAAGAGCAGTGTTTTTTATTGCACAGTTGTAAAGTGTTGCCTGTGAGAAGAAAAA-TTAATGTG
CAGAAACGCCTTTTTATCAGCAATTGCAGTGC-------GGCTAGTTCAAATTATGAAGTGCAAATTTCA----------
---AACTATGGTTCAGATTTTGAAATTATGATGAACACTGCAACTG--------------------------------TG
GTTCAGATTTTGAATAACAGATAG-ATATCTCACACACCACATTTTTAGGAGGAAATTCAGAAGGACAGAGACATCAAAG
ATTATTCAAATAATTGAATAGCTGTCGTAGATAGCATCCAGAAAACATATATATACACCAAGACCAAGGTGTATTTTTCT
CACACAAGTCCTAATATAATAGTTTGTCAACAAGTCAGATAATATGCCTGACTTGCAACCAAACAACTGTTATT---CAA
ACCCTTCTTGCACGCACTCTTCTAAAAGCAAGAAACGAATAACAACCAACACGGCGAAATGTCAGACAATCCTTCCATCG
CACTCCCAAATCCAAACCCAAAGCAACAAACACGCGGGCAGCTCATTTGCACAGGTCGGTCGCAGGCGGGCGCAGGGCGA
CTCCTCCGAGCTTCTCGCTCGAGTACTTCTTGTAGACGACCTTCAGCTTGCTGTCAGGCGCGGTGGAGTGCGAGGCCACC
AGGATCTTGGCAGCGTCCCTGAAACCAATCATCACACAAAAGCATTGTCTCTGTCAGTGCGTGC
>chr3A_133
--------------------------------------------------------------------------------
----------------------------------------------------AGTACCATGCATATGATACTAGTCTATG
ATACTAC-ATCCCTAATGCATGGTATCATGTGTTGGTATCATAGAGGACTACATTTATTGCCATGCATGACACAAAGTAG
CACATCATTTAATATGATACGGTATCATGATATGATACTCAAGTCTCTCTTTTTTCATTTAATTCTATGCCACCTCATCA
AAATGGCTTAGTTGGCATGCATGATACTATCTATGATACTCCCATTACGGACAGCCTTAGTGGGGGCTAGCTTTTTC---
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---------------------------------------------------------------AGGTGGGGGCGGGCGCG
CCCGGGCGTCCCTATATCCGCCTCATATTTAAGTTGAACTAGATGATGCCCCGCACATTGTTGCGGGAATCTTTTGCAAT
GTTTCATTGA----------------------------------------------------------------------
----------------------------------GATTTGGTTATATCGAACATCAATACTTAAAACAATTGTTTT----
-------------------------------------------------------------TTAAAGTATATAAGAATTA
AATGTAAATAGCATAACAGAATGAAAT-----------------------------------------------------
--------------------------------------------------------------------------------
-----------TTGACATGCATGCATGTTG--------------------------------------------------
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------------------------------------------------------------------------AAGTGGAT
TTTTACTATGTATAGTTGCATGTTGA------------------------------------------------------
-----------------------------------------------------------GGTGGGTCTTTTTTATGCATG
TTGAATGGTGAGGTGGCATGCTTGCATGTTGAGAGAAATATGTTAGGCTGGTTGTAATGGGGAGTATCATATACTAGTAC
CATGCATATGATACTAGTCTATGATACTACATCCCTAATGCATGGTATCATGTGTTGGTATCATAGAGGACTACATTTAT
TGCCATGCATGACACAAAGTAGCACATCATTTAATATGATACGGTATCATGATATGATACTCAAGTCTCTCTTTTTTCAT
TTAATTCTATGCCAC-----------------------------------------------------------------
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------------------------------CTCATCAAAATGGCTTAGTTGGCATGCATGATACTAT-------------
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---------------------CTATGATACTCCCATTACGGACAGCCTTAGT----------------------------
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>chr3D_781
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------------------------------------------------------------------TAGAAAAATTACTC
TCGTCGGCCGGCCAATAGAAAAGATGCTACACGTCGCCGCAGATTCCTCCGCGCGCACGTTGGCGGCTGACACCAGCACC
AGAGTCACCGCACCGCACGCTCTGCTCAGTGCTCACTCCAAACAGACATCGTCTGCGGCCA-------TACGCAGCGACA
GCGCGACGAGAGCCCCACACACACTCGTCACGA------CACGGAGATGGCCGCCGCCGCCGCC------GAGCCGTGCC
GCTGCCACATTCTGGCGGTGCCGTTCCCCGGCCGGGGCCACGTCAACGCCATGATGAACCTGTCCCGCCTCCTGGCCGCG
CGCGGCGCCGCGGTCACCTTCGTCGTCACCGAGGAGTGGCTCGGCCTGCTCCGCTCCTCCTTCTCCTCTTCCGCCCCGCC
GCCGCCCGGCGTCCGCCTGCGCGCCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGCCGCCGACCACGCGGGCTTCC
TCGACGCCGTCGCCACCGAGATGGAGGCGCCCTTCGAGCTCCTGCTCGACCGCCTCCGTGA---------GGAGGAGGTC
CCGCCCGTAGCGGCGCTCGTGGCCGACAGCTACGTGTCCTGGGTCGTGGGCGTCGGCAACCGGAGGGGCGTTCCGGTCTG
CTCGCTCTTCCCCATGTCCGCCTCCTTCTTCTCCGCCTACTACCACTTTGACTCCCTCCCGCCGCGCCTCGTCGACGAGC
GCGCCCCGGCCGCCGGCGCCGCCACAGGTCAGGTTCCTCTTCCAAGCAT---------------TTCTGATAGGCTGAGA
TAACGCTCCCAATTACTGGACCATTAACGTTACTGATAGGATGATAACGCTCCCGATTACTTAAACATTAACGTTACTGG
TTGAGGAACCAACAAAAAAATTTACCCGCAAAAAAAAAAAAAAATTGGCTGTTGCATCTGATTTACATGTGTTGGATTTG
AATGTACAACTACCATCTGATT----------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------TA------------------------------CATGTTCA
TGTTCATGAACTAGGGTCCT-----------------------------------------------TGATAACTCTGCC
AAAAATATA-----------------------------------CAACATTTCACTGATTCAAGTGCCATTGTTTGACTG
CTCCATTATTTATGTGCACATCCCGACGTA-TTTCAAGTGATACGATGCCGGCAGCTGCATGTGCAAAGGACAGAGTGAC
GCGGAGGATGGCCAACAAACATTGCCAGACATGAAAATGACTAATCAATCACATGTAACTTTAAAGTGGACCTGTCTATT
TGTTTGTGGCA-ATGCTATTACTGGGAGAAAACTCACCGAAT--------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TAAGGATCTGCATGCAG
TTTTTTTATGGACAGTCCAAATAGCCAGAACTG-------------------------------AGCCATAGATCAAGCT
TGAGAAATTGGTGTCGCATATGAGTATTGTTTTAACTGTACCACATGGTTCTCATTTCGGGTGACTTTATTTTTT--ATA
GTCTTTATTATAGTGCAAA-AGTTTGTTCATCTCA------------------------------ATCATATATACATGG
CAGCTTGCAGCATTGCTCAGCCATCCTTTCTTGTATGCAGATAA-----ATCTGATGAGAGACTTGAGCACTATATCTCA
GGCTTTGCTTCAAGTTCAGTGACCTTGTCTGATCTGGAGCCCCTAATTCACAACATGACAACAGTAAACCATGTCCTAGC
AGCTGTCTCTAGCATCAAGAACGCGCAATGCCTCCTATTCACCACTATGCATGAGCTCGAGGCCGGTGTCATCAACTCCC
TAAGATCAGCACTCCCATGTCCAGTTCTCCCAGTTGGGCCCTGCATTCCCTACATGACACTAGAAGACCAGCATTCCAAG
TCCAATGGAGAAGTTACCACCAGTCCAGGAGACTGCTTCACCTGGCTGGACTCTCAACCTGTGAACTCGGTGCTATACGT
CTCCCTCGGGAGCTTCCTCTCTGTGTCAGCCTCCCAGCTTGATGAGATAGCATTGGGCCTTGCATCGAGCGGTGTCAGAT
TCTTATGGATTCTTCGTGAAAAGTCTTCCCGGGTGCGAGAACTTGTCGGTGACACCGACAGGGGCATGATAATGGCATGG
TGCGATCAGCTGAAGGTTCTGTGCCATCCTTCTGTTGGGGGCTTCCTGACACATTGTGGGATGAACTCGACGCTTGAAGC
TGTCTTTGCTGGTGTGCCTATGCTTGCTCTACCACTGTTCTTTGATCAACCGATTCATGGCCGTCTAATTGTTGAAGACT
GGAAGGTTGGACTGGCCCTGCGGGAATGGGCTGATAAGGATGGCCTGATTGGGAGTCAGGACATTGCAAGGGCTGTTAAG
AGGCTCATGGCCTGCGATGAGGCCGATGCCAAGGCGATAAGGAGGCGTGCCCTTGAGTGGAAAGAGGTCTGTGGCAGAGC
TGTCGAAAAGGGTGGATCTTCGTATGATAATCTCAGTTCATTGATGCAGATGGTATGCGCGTCACGATGTACTGAACTTG
ATCAGCAATGTTCCAAAACTGATGCTTGAAATGCATCATCTAT-------------------------------------
--------------------------------------------------------------------TCAACCATTTGC
TTTCATTGCTCTTGTACCAATTCAAATGTTGTGTGAGTGTAGTTTTTGATGAGCTCTTGGTACGGTTTCTGGCAGAGCTG
TCAAAGGGCAATCTCAAC---TCCTGAACTCACTCAGCCATTTGGTTTCATTGTTCTTGTATCTCCAT------------
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----------------------------------------------------------------
>chr3B_799
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----CGGCCGGCCAATAGAAAAGATGCTACACGTCGCCGCAGAATCCTCCGCGCGCACGTTGGCGGCTGACACGAGCACC
AGAGTCACCGCACCTGCGCGCT------CTGCTCACTCCAAACAAACATCGTCTGCGGCG--------TAGGCAGCGACA
GCGCGACGAGAGCCACACACAC------TCGTCAGTCGTCACGGAGATGGCCGCCGCCGCCGCG------GAGCCGTGCC
GCTGCCACATTGTGGCGGTGCCGTTCCCCGGCCGGGGCCACGTCAACGCCATGATGAACCTGTCCCGCCTCCTGGCCGCG
CGCGGCGCCGCGGTCACGTTCGTCGTCACCGAGGAGTGGCTCGGCCTGCTCCA---------CTCCTCCTCCGCCCCGCC
GCCGCCCGGCGTCCGCCTGCACGCCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGCCGCCGACCACGCGGGCTTCC
TCGACGCCGTCGCCACCGAAATGGAGGCGCCCTTCGAGCTCCTGCTCGACCGCCTCCGTGAGGAGGAAGGGGGGGAGGTC
CCGCCCGTCGCGGCGCTCGTGGCGGACACCTACGTGTCCTGGGTCGTGGGCGTCGGCAACCGGAGGGGCGTCCCGGTCTG
CTCGCTCTTCCCCATGCCCGCCTCCTTCTTCTCCGCCTACTACCACTTCGAGTCCCTCCCGCCGCGCCTCGTCGACGAGC
ACGCCCCGGCCGCCGGCGCCACCACAGGTCAGGTTCCTCTTCCAAGCAT---------------TTT-------------
--------------------------------CTGATAGGCTGATAAAGCTCCCGATTACTGGACCATTAACGTTACTGA
TTGGGGAACCAACAACATTTCATTCAATTT-------------GTTGGCTGTTGCATCTAT----CAGGTGTTGGATCTG
AATGT---ACTACCATCTGATT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TATAGTTCAGTGAGTACATGTGATTAATTAGTCATTTTCA
TGTTTGGCAATGTTTATGGACCATGCTCCGCGTCAGTCGGCCCTTTGCACATGCAGCTGCCGGCCCGCATCGTATCACTT
GAAATACGTCGGG-------------------------------------------------------------------
-----------ATGTGCACATAAATAATTAATGGAGCAGTCAAGCAATGG------------------------------
-------------------------------------------------CACTTGAATCAGTGAAATGTTACTGTATATT
TTTGGCAGAGTTATCAAGGACCCTAGTTCATGAACAGAACATGTGGTGTTTGTTTCTCTAGGCCTAGGACTTTTTCTAGT
CCCTGGGGCTTTTTGAAAAAGACTCTCAAGGGGTGCTTCTAAGGACTTTTAGCAAAAAGTCCCAAAAAAGTCCCACCCTG
TTTGGTTTGTTAGGGACTTTTTCTAGTCCCTGCACCAAAAAGTCCTTGGAAACAAACACCCCCTAAGGGTCTGCATGCAG
TTTTTTTATAGGCCGTCCAAATAGCTAGAACTG-------------------------------AGCCATAGATCAAGCT
TGAGAAATTGGTATCGCATATGAGTATTGTTTTAACTGTACCACATGGTTCTCATTTCGGGTGATTTTATTTTTTTTATA
GTCATTGTTATAGTGGATGTAGTTTGTTCATTTCA------------------------------GTAATGG--ACATGG
CAGCTTGCAGCATTGCTCAGTCATCCTTTCTTTTCTGCAGATAA-----ATCTGATAAGAGACTTGAGCACTATATCTCA
GGCTTTGCTTCAAGTTCAGTAACCTTGTCTGATCTGGAGCCCTTAATTCACAACAAGAAAACAGTAAACCATGTCCTAGC
AGCTGTCTCTAGCATCAAGAACGCGCAATGCCTCCTATTCACCACCATGTACGAGCTTGAGGCTGGTGTCATCAACTCCC
TAAGGTCAGCACTCCCATGTCCAGTTCTCCCAGTTGGGCCCTGCATTCCCTACATGACACTAGAAGACCAGCATTCCAAG
TCCAATGGAGAAGTTACCACCAGTCCAGGAGACTGCTTCACCTGGCTGGACTCTCAACCCGTGAACTCGGTGCTATATGT
CTCCCTCGGCAGCTTCCTCTCTGTGTCAGCCTCCCAGCTTGATGAGATAGCATTAGGCCTTGCATCGAGCGGTGTCAGAT
TCTTATGGATTCTTCGTGAAAAGTCTTCCCGGGTGCGAGAACTTGTCGGCGACACCGACAGGGGCATGATAATGGCATGG
TGCGATCAGCTGAAGGTTCTGTGCCATCCTTCTGTTGGGGGCTTCTTGACACATTGTGGGATGAACTCGACACTTGAAGC
TGTCTTTGCTGGTGTGCCCATGCTTGCTCTGCCACTGTTCTTTGATCAACCGATTGATGGCCGTCTAATTGTTGAAGACT
GGAAGGTTGGACTGGCCCTGCGCGAATGGGCCGATAAGGATGGCCTGATTGGGAGTCAGGACATTGCAAGGGCTGTTAAG
AGGCTCATGGCCTGCGATGAGGACAATACCAAGGCGATAAGGAGGCGTGCCCTTGAGTGGAAAGAGGTCTGTGGCAGAGC
TGTCGAAAAGGGTGGATCTTCCTATGATAATCTCAGTTCATTGATGCAGATGGTATGCGCGTCGCGATGTACTGAACTTG
ATCAGCAATGTTCCAAAACTGATGCTTGAAATGCATCATCTCAACCATTGATTTCATTGCTCTATTCAACCATCTTGAAC
ACAATCAGCCATTTGGTTTCACTTTAGCTTGTGGGGGATAATCTCAATTCATTGTCCTGAAAACTCAATCAGCCATTTGG
TTTCATTGCACCTTTAGCTTGTA---------------------------------------------------------
-------ATCTCAATTCATTGTCCTGAACTCAATCAGCCATTTGATTTCATTGCACTGCAAAGTGGCTACTGTGAAGTTT
TTATGATAAGAAAATTTTAATGCGCAAACCACCTCTAAGACATGAATCAACAGTCTTTTATGAGCAGTGTTTATGAGCAG
GCTCCAAATTATGAAGGTGCAAATATGGTTCAAGAATCAACAGTCATGTAAGCTGGTTAAATAAGGAGGAAGTTCAGAAG
GACTAAAAAAGAAATTGATTGCACATTGTAAAG--------------------TGCCTGTGAGAAGAAAAAGTTAATGTG
CAGATTTTGTA----------AATTGCAGTGCCGAAAAAGGCCAGTTCAAATTATGAAGTGCAAATTGTAAATTGCAAAC
AACAACTGTGGTTCAGATTTTGAAATTATGATGTCATATTTTGAATAACAGTTACACCATATTTTTAGGAGGAATTTCTG
GTTCAGATTTTGAACAACAGTTAAAATATCTCACACAACATATTTTTAGGAGGAAATTCAGAATGACAGAGACACCAAAG
ATTATTCAAATAATTGAATAACTGTCGTAGATAGCATTCAGAAGACATATATATACACCAAGACCAAGGTGTATTTTTAT
CACACAAATCCT------------TGTCAACAAGTCAGATAATATGCCTGACTTGCGACCAAACAACAAACTCTTAGCAA
ACCCTCCTTG----CACTCTTCTAAAAGCAAGAAACGAATAGCAATCAACACGGCGAAATGTCAGACAATCCTTCCATCG
CACTCCCAAGTCCAGATCCAAAGCAACAAACAGGCGGGCAGCTCATTTGCAGAAGTCGGTCGCAGGCGGGCGCAGGGCGA
CTCCTCCGAGCTTCTCGCTCGAGTACTTCTTGTAGACGACCTTCAGCTTGCTGTCAGGCGCCGTGGAGTGCGAGGCCACC
AGGATCTTGGCCGCCTCCCTGAAACCAATCATCACGCAAAA-----------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---S--------------S----
------SS----------SSSS-----------------------------S--------S-------------------
---------------S---------------------------S--------S---S-----------S-----------
----S-----------------------------------SSS-------S----S-SSSSSSSSSS-S-SSSSSS-SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
-----------S------------------S---------------------------------------------S---
---S------------S-------------------------------------------SSSSSSSS------S-----
--------------------S-SSSSS-------------------------------------SSSSSS----------
-------------------------------SS----------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S-------------------SS
SS----------------------------------S-------------------------------------------
-----------------------------------------------------------------------S--------
----------------------S----------------------SSSSSSSSSSSSSSSSSSS----------------
----------------------------------------------S-S-------S-S--------S--S-SS------
----------------------S-----------------------S-S------------------S-----------S
--SSS---S---------S--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS---SS-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------S----
--------S--------S--S-SSS-----SS---SSSSSSSS---SSSS-S-S--SSSSSS-SS----S----------
------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----S-----------SS-------------
------------------------S-----S---------S-------------------------------SS------
S-----S----S---S-----------S-----------------S---------------S-------S-S--------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S-S-------------
----S----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
---------------S-------------------------------S--------------------------------
------------------------------------------------------------------S-----------S-
----------------S-----------------------------S---------------------------------
--S------S--------S-S-----------------------S--------------S--------------------
------------S-----------------------------------------------S-----S-------------
--------------------------------------------------------------------------------
--------------S------S----------------------------------------------------------
---S---S---------------------------------------------------S----------S-------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-------------SSSS-SSSSSS-----------------------
----------------------------------------------------------------S--SSSSS-SSSSS-S
SSS-S-SSSSSSS----SSS-S-SSS-SS-SSSSSSS-SSSS--S-SSS-SS--S-------------------------
------S-S------------------SS-S--S---S-S-S-SSS-SS----------------------S--------
---SS-S-SSSS--SSS-SSSSSSS-SS-SSSSSSSSSSSSSSSSSSSSSSSS---------------------------
----SSSSSSSSSSSSSSSSS---------------------S------------------------SS-----------
-------S-------------------------SSSSS-SSSSSSS----------------------------------
--------------S-----S--S-------------S--S----------------------S----------S-----
--------------------S----------------S-----S----------------------------------S-
-------S----SSSSSSSSSSSS--------------------------------S----------SSSSSS-------
-----S----SSSS---------------------------S---S----------------------------------
---------S----S-S---------------S------------------S-S--------------------------
-------------------------------------------------------------S------------------
-----------S--S--------------------S-----SSSSSSSSSSSSSSSSSSSSSSS
>forward_475
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GCGTCCTACTACTCCCTCCT-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------
>reverse_2174
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------AATTTCCAAGCGCGCCTTTT-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------
>forward_1673
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CGACTGCTGAACCACTAGCA-------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------
>reverse_3781
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------ATGCCATCCTTCTGTTGGGG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>forward_2193
--------------------------------------------------------------------------------
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-------------AATTTCCAAGCGCGCCTTTT-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4370
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GGGAGAGCTACGGTTTCTGG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
