>input_sequence_27061
--------------------------------------------------------------------------------
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------------------------------------------------------------------ATGCAGCAGCCGCA
GCTGCAGGCGCCGCCCTCGTGGGCGTCCGGGCCCGACCCCGCCCGCCCTGCTCCCACCACCTTCGACGAGGCGTCCATGG
AGCGGAGCAAGAGCTTTGTCAAGGCGCTCCAGGTACGCCGCCGGCCAGGATCCGGGAGATCCCGCCGCTACCCGGCCTGG
CCATCGCCTCTATCGGCGCGCCGACAGATCCGCGTTTTGCGCTCCCGTTTGTTAGGTTGGCGGTAAGTGACCTGCGTCTG
TCGCGCGTGCAGGAGCTCAAGAACCTGCGCCCACAGCTTTACTCCGCCGCGGAGTACTGCGAGAAGTCGTACCTCCACAG
CGAGCAGAAGCATATGTGAGCTATTCTTGTCTCCACTGCGATTCA-AGTTCTAGCACTCAATTC-----TATTCTGTAGC
AACTCGGTCGCAATTTCTTGGTAGTAATAACAACTTTGCATGTGTAGCAATCATTGTTTACTTGATGTTGCTAGCCGATG
TTTTAACCAAACTTTATGCCCAGCTTCTATTTTGGTG------------------------------------------T
TGATTGGTTCAGTAGTATGCTAGTAGCATACTTGCACCCATCTACAGACGAACTAGGATCAGACAAATCAAGGACAATTG
ATTGACAAAAACTCTCCAGGTGTGGAGGCTTAAATGCGGAGACACCACTAGAGAATTAATCATGGGCAGTGAAGGTTGTA
GGAATTTTGGATTTCTTTGCACAACTTTTCATAATTGTTTAATTCAGATCTGATATTTTAAGCCGTCGCCTGAGAAATAG
TTACTCCAAATTGTGCAACTACTCGATTCCCATTGGATAAAGAAGAATCAACGATCAGAAACGTCCACCTAGAAATAAGA
ATTTCTTGGTCGACTTAGAAATAAAGGTTACCTTGTTAATTTTAGTTGAATGGACGCGTCCATCTTCTGCATCTGGCTGC
ACTGCAAAAGGAACCAAAGATTCTGTAAATATGGAAGAACAAAAGGCAGCATCAAGTTTCTGCTAGGTGATCACTGCACA
GAAGTAGAACATGCAGCGAGAGGTTGTCTGATCATTTTTCGCATGTTCCTGTTATCAGTGTGCTGGACAACTTGAAGGAT
CGAGTTAGGTGTGGCGGAGATGCGTATGTTGAGATGGATGTGTGGCCACACGAGGAAGGATCGAGTCCGGAATGATGATA
TACGAGATAGAGTTGGGGTAGCACCAATTGAAGAGAAGCTTGTCCAACATCGTCTGAGATGGTTTGGTCATATCCAGCGC
AGGCCTCCAGAAGCTCCAGTGCATAGCGGATGGCTAAAGCGTGCGGAGAATGTCAAGAGAGGGCGGGGTAGACCGAATTT
GACATGGGAGGAGTCCGTTAAGAGAGACCTGAAGGATTGGGGTATCACCGAAGAGCTAGCTATGGACAGGGGTGCATGGA
AGCTTGCTATCCATGTGCCAGAGCCATGAGTTGGTTGCGAGATCTTATGGGTTTCACCTCTAGCCTACCCCAACTTGCTT
GGGACTAAAGGCTTTGTTGTTGTTGTTGTAGTGTGCTGGACAACTTGAAGGATTATGCTGTTAGGGCTCTGGTCAACGCG
GTCGACCACCTTGGCACCGTTGCCTACAAATTGACAGACCTGTATGAACAACAGGTTTCAGAGGTCTCAACTGTCGAGCT
GAAAGTAGCATCCTTGAACCAGGTACTGACTATTTTAGCAAGAGAATTTGTGCTGATAGAGCTGCAGGATTTACAAGTGA
CACTTACTTTCCATGTTCAGCAAGTCCTGACTTGCCAAACTTACACCGATAAAGAAGGCCTTAGGCAGCAGCAGATGATC
GGAAACGCCACAAGACACCACAAACATTACATCGTACCAAGTAAGGACGTGTGATACAAACATTTATTTCTCAGCCCAAG
AAACGATTATCACCTAATTTAACTTGTGAAATTTTCTCTGAACTAGCTGCGGGAAACAAAAGAACGCAGGCCTTTTCTGA
GATGCAAACAGACGCCGAGTTTGACTTAAAGCCTAAACCTTATCCCTCAGGTGCCTTTTCTTGCTTCTGTGCGCACATTT
GGAAGTTTGATGCCATATACTTAGTGTACTAATGCAAAATGTTTTCCTTATTAGAGAAGACTCTTTTCTGGCACTTGGCT
TCAGAGAAGAACACCAAAACCAATGGAGAACACCAATCTGAATTAGGGTAAGTATGTCACGCCCATTTTTATACACTCTT
CCGAAATGGGGTATTTGATTTGTTGTCATCTGCTTTTGCAGCCACGGGGAAACGAAAACTACTAAGCCTACATCCAGTGG
TGGGTTCAACCTTACAGGTATTTAATTTATTTGGTTGCTTATAGCCCCAGTTGTGTGTTTTGCTTTTATGATTGGTACAA
AG-TGTATCTATCTAGGCAGATTTTTTGCATAGTTTATATCTGTGTGTACAGACAACAAGCATTTTATCTGAAACAACTT
ACATTTCAGGTAAGGAATTGTCCGTGTCTCCCTTGCCCAAGCGTCTGCAGTCAACTGTGAGCAGTTCGGACATTGTTACG
CGTAACATTGGCATGAAGGTAAACCATGATATGATGAAATATGTGCTTAGTATTAAGACCTGTAATTCATTTGATGGTGT
AAAACTTGTCTATTTCCCTCCACAGACAACCTATCTTGTGTACAG-----------------------------------
--------------------------------------------------------------------------------
----------------------------------------------AACTCTTGATTATATATTGGGGTTGCCTGATTTG
CATTTTCAGGATCAGCCTGGTGCAAGGCATTTGGCATCATTCAGTTCTCTCGACAACCCAAGAGGGCGTCAAATCCAAAA
GGCTCCCGTCCGCACCAAAAGTATGCTAGCTGCTTTCTTTGTCAGGCACAGGTCCGGAAAGATGAAAAACGCCTCTGTTC
GTTGA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>chr3A_1_TraesCS3A01G225000
AACGAAGATTCGATGTAGATTTCTATCATTTTCTTGGGATGATGAGGTTAGAGTTTCTCGTCATGTGGCAAGATCTGGTG
TCAGGCACTTTAGATTTATTAAATGGTTCAACGACGACGACCGTGGCTTCAGGGCATCGGGGCATGTGCACGAAGACATC
TCCGCTGTCATTGACAAGGCCAAGTAGACCCTGGTAGGGGGAGCGGCATAGCAGCGCGTCGGCGTCTTATTCTGGGGTAG
TAGTGGTCGTTCAGGGGTAGCGGAATCTCGTATATTTTTTATTATGTTTCAGATGTACTTTTTTTTACTTTCGATGAACT
TTTATAATAGATCCGATGCTTTTCGAATAAAAGAGATAACTAATTCTCCTTTTAGTACATGTCAAGGCCATAACTTGTTA
CGCACAAATTGCAATGTACAGCAACCGAACCCAAAGGTACCAACGCACCAAACATGTTGCAACCAAACAGCAACAG----
--------------------------------------------------------------------------------
--CCAAGTGCAGAGGACGAGCCACAGGACGGA----GGAGACAAACTCAC-TTTTTCATCAAATCATCAGTGAATTTTTT
TAGAA---AGTACTAGCTCCCACAAAACACAGCCGAGAGAGATTCCCCGCGAAGGAAAAAGAGGCTGACAAAGCTTGCAC
TCGATTCCCCTAATCTGCTGCCGTCATTTGCCAAGTGCAACAGGGCCTGCGTGGGTGGGTGCTGCGCCCGCCGCACATTG
ACTAGAAGTTAAAGCGACTGGCAACCAACACGACCCCGTCCGCCGTCGCCATCCGCGCCCACCCTCACCACCTCGC----
---TCGCTGCCCCGCCCCCACTCCACCACCTGCCTCCACTCCCGCACGCAGCCGGAGCCGGAGCGCAGCTACCTCCAATA
CGCGAGCCGCTGCTGCTGCAGCACCCGGCAGGCGGGACAACAGCAGAGGCGAATCGCATTCGCTACCTTGCTTCCTCC--
---TGACGTGCCTTGGCCTCCCCGCTTCCCGTTCCCACCGACGACAGGAGCGAGCAGAGGACCGCGATGCAGCAGCCGCA
GCTGCAGGCGCCGCCCTCGTGGGCGTCCGGGCCCGACCCCGCCCGCCCTGCTCCCACCACCTTCGACGAGGCGTCCATGG
AGCGGAGCAAGAGCTTTGTCAAGGCGCTCCAGGTACGCCGCCGGCCAGGATCCGGGAGATCCCGCCGCTACCCGGCCTGG
CCATCGCCTCTATCGGCGCGCCGACAGATCCGCGTTTTGCGCTCCCGTTTGTTAGGTTGGCGGTAAGTGACCTGCGTCTG
TCGCGCGTGCAGGAGCTCAAGAACCTGCGCCCACAGCTTTACTCCGCCGCGGAGTACTGCGAGAAGTCGTACCTCCACAG
CGAGCAGAAGCATATGTGAGCTATTCTTGTCTCCACTGCGATTCA-AGTTCTAGCACTCAATTC-----TATTCTGTAGC
AACTCGGTCGCAATTTCTTGGTAGTAATAACAACTTTGCATGTGTAGCAATCATTGTTTACTTGATGTTGCTAGCCGATG
TTTTAACCAAACTTTATGCCCAGCTTCTATTTTGGTG------------------------------------------T
TGATTGGTTCAGTAGTATGCTAGTAGCATACTTGCACCCATCTACAGACGAACTAGGATCAGACAAATCAAGGACAATTG
ATTGACAAAAACTCTCCAGGTGTGGAGGCTTAAATGCGGAGACACCACTAGAGAATTAATCATGGGCAGTGAAGGTTGTA
GGAATTTTGGATTTCTTTGCACAACTTTTCATAATTGTTTAATTCAGATCTGATATTTTAAGCCGTCGCCTGAGAAATAG
TTACTCCAAATTGTGCAACTACTCGATTCCCATTGGATAAAGAAGAATCAACGATCAGAAACGTCCACCTAGAAATAAGA
ATTTCTTGGTCGACTTAGAAATAAAGGTTACCTTGTTAATTTTAGTTGAATGGACGCGTCCATCTTCTGCATCTGGCTGC
ACTGCAAAAGGAACCAAAGATTCTGTAAATATGGAAGAACAAAAGGCAGCATCAAGTTTCTGCTAGGTGATCACTGCACA
GAAGTAGAACATGCAGCGAGAGGTTGTCTGATCATTTTTCGCATGTTCCTGTTATCAGTGTGCTGGACAACTTGAAGGAT
CGAGTTAGGTGTGGCGGAGATGCGTATGTTGAGATGGATGTGTGGCCACACGAGGAAGGATCGAGTCCGGAATGATGATA
TACGAGATAGAGTTGGGGTAGCACCAATTGAAGAGAAGCTTGTCCAACATCGTCTGAGATGGTTTGGTCATATCCAGCGC
AGGCCTCCAGAAGCTCCAGTGCATAGCGGATGGCTAAAGCGTGCGGAGAATGTCAAGAGAGGGCGGGGTAGACCGAATTT
GACATGGGAGGAGTCCGTTAAGAGAGACCTGAAGGATTGGGGTATCACCGAAGAGCTAGCTATGGACAGGGGTGCATGGA
AGCTTGCTATCCATGTGCCAGAGCCATGAGTTGGTTGCGAGATCTTATGGGTTTCACCTCTAGCCTACCCCAACTTGCTT
GGGACTAAAGGCTTTGTTGTTGTTGTTGTAGTGTGCTGGACAACTTGAAGGATTATGCTGTTAGGGCTCTGGTCAACGCG
GTCGACCACCTTGGCACCGTTGCCTACAAATTGACAGACCTGTATGAACAACAGGTTTCAGAGGTCTCAACTGTCGAGCT
GAAAGTAGCATCCTTGAACCAGGTACTGACTATTTTAGCAAGAGAATTTGTGCTGATAGAGCTGCAGGATTTACAAGTGA
CACTTACTTTCCATGTTCAGCAAGTCCTGACTTGCCAAACTTACACCGATAAAGAAGGCCTTAGGCAGCAGCAGATGATC
GGAAACGCCACAAGACACCACAAACATTACATCGTACCAAGTAAGGACGTGTGATACAAACATTTATTTCTCAGCCCAAG
AAACGATTATCACCTAATTTAACTTGTGAAATTTTCTCTGAACTAGCTGCGGGAAACAAAAGAACGCAGGCCTTTTCTGA
GATGCAAACAGACGCCGAGTTTGACTTAAAGCCTAAACCTTATCCCTCAGGTGCCTTTTCTTGCTTCTGTGCGCACATTT
GGAAGTTTGATGCCATATACTTAGTGTACTAATGCAAAATGTTTTCCTTATTAGAGAAGACTCTTTTCTGGCACTTGGCT
TCAGAGAAGAACACCAAAACCAATGGAGAACACCAATCTGAATTAGGGTAAGTATGTCACGCCCATTTTTATACACTCTT
CCGAAATGGGGTATTTGATTTGTTGTCATCTGCTTTTGCAGCCACGGGGAAACGAAAACTACTAAGCCTACATCCAGTGG
TGGGTTCAACCTTACAGGTATTTAATTTATTTGGTTGCTTATAGCCCCAGTTGTGTGTTTTGCTTTTATGATTGGTACAA
AG-TGTATCTATCTAGGCAGATTTTTTGCATAGTTTATATCTGTGTGTACAGACAACAAGCATTTTATCTGAAACAACTT
ACATTTCAGGTAAGGAATTGTCCGTGTCTCCCTTGCCCAAGCGTCTGCAGTCAACTGTGAGCAGTTCGGACATTGTTACG
CGTAACATTGGCATGAAGGTAAACCATGATATGATGAAATATGTGCTTAGTATTAAGACCTGTAATTCATTTGATGGTGT
AAAACTTGTCTATTTCCCTCCACAGACAACCTATCTTGTGTACAG-----------------------------------
--------------------------------------------------------------------------------
----------------------------------------------AACTCTTGATTATATATTGGGGTTGCCTGATTTG
CATTTTCAGGATCAGCCTGGTGCAAGGCATTTGGCATCATTCAGTTCTCTCGACAACCCAAGAGGGCGTCAAATCCAAAA
GGCTCCCGTCCGCACCAAAAGTATGCTAGCTGCTTTCTTTGTCAGGCACAGGTCCGGAAAGATGAAAAACGCCTCTGTTC
GTTGATCAACTGCAAACCTGCAGTTTGCTCCTGCCCGCCCCACCATGAAGTACATGCAACAAACTCAGTCCACATCTCTT
ATATGACTATTTGCATCTTGTATGTTAGCGGTCTAGAGATAGACCTTATTTTGATGCCCTTTTCATCTATAAATTGATGA
AAAAAATTATACAGATATAGTCAGTCTTAAACCATCGTGTCTAGTCACTAGGCAGAAGTTCCAGAAGTTTTCAGTATAAA
TGAATGAGATGGAATGCATATGGGTATGTCAATGGTAAGTTCCTTTCATTTATATATAGATCATAAAGCGTGTCTGTAAA
GAAAACAATCGAAGATTTGTATCTCCTTGAATCAATGTTCACAGGTCTTTTTGCGTGGAAAACTAT-GCCACTGGTTTTT
CAGGCATACTCACAGAGATTATTATTCAGTTGAGAGCGACGACGGGACCCTCCCGACCCACCCACCCCTCCTGTGTCGCC
CCTGCAGGAGACGGGGAGGGAACCCTAACCGTCGTCGGCCATCCTCCCACTTACTGCCCCCGCCGCCACCACAAGGCGCG
CTTAGGCAAAGTCTAGCCGCCGCCGGCGGCGGGCCTCTTCATCCCCTGGCGTGTGGCGCGGGTGCAGGTCGCCACCACAG
GCCAGGGCTTCACGATTGGTGGGTTGCGGCGGTGCTCCGAGTGCCCTCCCGGCGACGACATTAGGTGGCATCCGTGATGC
ATCGGGCTGCTTGCTGGAGGGGCATGCTTGCCGCCACTTGCGACCAAATCTGGCGCGAGGTGTATTTGGCGGCGCGT---
-------------GGCCGGCGGCCGCTGCGGGTCCTGGACGGTGGTGGCGGTTGGTCGTTGTCGGGGGGTTGGGTGTGAC
ATATGCCAATGGATGGCTTATCATGGTGGGAGCGAGTAGAACGTCGCCGGTGCCTGGAAGCGGGATGAGGCGTAGACACG
AACGCTGGCGTACTTTACCCAGGTTCGGGGCTCTTCTAGGAAATAACACCCCTAGTCCTGCT
>chr3B_349
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AAAAGAGATAGCTAATTCTCCTTTTAGTACATGTCAAGGCCATAACTTGTTA
CACACAAATTGCAATGTACAGCAACCGAACCCAAAGGTACCAACGCACCAAACATCTCGCAACCAAACAGCAACAACAAA
AAAAAATGAGACCATCCAGGACTAGCCCTTGGAGGTATATTTTTACAGAAGAAATTCTCTAAGCACCCGGGTCACCTCTG
AACCAAGTGCAGAGGACGAGCCACAGGACGGA----GGAGACAAACTCAC-TTTTTCATCAAATCATCAGTGAATTTTTT
TAAAAAGTAGTACTAGCTCCCACAAAACACAACCGAGAGAGATTTCCCGCGAAGGAAAAAGAGGCTGACAAAGCTTGCAC
TCGATTCCCCTAATCTGCTGCCGTCATT-GCCAAGTGCAACAGGGCCTGCGTGGGTGGGTGCTGCGCCCGCCGCACATTG
ACTAGAACTTAAAGCGACTGGCAACCAACACGGCCCCGTCCGCCGTCGCCATCCGCGCCCACCCTCACCTCCTCGCTCGC
TGGTCGCTGCCCCGCCCCCACTCCACCACCTGCCTCCACTCCCGCACGCAGCCGGAGCCGGAGAGCAGCTACCTCCAATA
CGCGAGCTGCTGCTGCTGCAGCACTCGGCAGGCGGGACAACAGCAGAGGCGAATCGCATTCGCTACCTTGCTTCCTCCCC
TCCTGACGTGCCTTGGCCTCCCCGCCTCCCGTTCCCACCGACGACAGGAGCGAGCAGAGGACCGCGATGCAGCAGCCGCA
GCTGCAGGCGCCGCCCTCGTGGGCGGTCGGCCCAGACCCCGCCCGCCCTGCTCCCACCACCTTCGACGAGGCGTCCATGG
AGCGGAGCAAGAGCTTCGTCAAGGCGCTCCAGGTACGCCGCCGGCCAGGATCCGGGAGATCCCGCCGCTACCCGGCCTGG
CTATCGCCTCTATCGGCGCGCCGACAGATCCGCGTTTTGCGCTCCCTTTTGTTAGGTTGGCGGTAAGTGACCTGCGTCTG
TCGCGCGTGCAGGAGCTCAAGAACCTGCGCCCACAGCTCTACTCCGCCGCGGAGTACTGCGAGAAGTCGTACCTCCACAG
CGAGCAGAAGCATATGTGAGCTATTCTCGTCTCCACTGCGATTCCCAGTTCTACCACTCAATTCTACAGTATTCTGTGGC
AACTCGGTCGCAATTTCTTGGCAGTAACAACAACTTTGCATGTGTAGCAATCATTGTTTACTTGATGTTGCCAGCCCATG
TTTTAACCAAACTTTATGCCCAGCTTCTATTTTGGTGTTGTGAGTCTACCAATGATGC--------------------AT
TGATTGGTTCAGTAGTATGCTAGTAGCATATTTGCGCCCATCTACCGACTAACTAGGATCAGACAAATCAAGGACAATTG
ATTGAGAAAAACTCTCCAGGTGTGGAGGCTTAAATGCTGAGACACCACTAGAGAATTAATCATGGGCAGTGAAGGTTGTA
GGAATTTTGGATTTCTTTGCACAACTTTTCATAATTGTTTAATTCAGATCTGTTATTTTAAGCCGTCGCCTGAGAAATAG
TTACTCCAAATTGTGCAACTACTCGACTCCCATTGGATAAAGAA---TCAACGCTCAGAATCGTCCACCTAGCAATAAGA
ATTTCTTGGTCAACTTAGAAATAAAGGTTACCTTGTTAATTTTAGTTGAATGGATGCGCCCATCTTCTGCATCTGACTGC
ACTGCAAAAGGAACCAAGGATTCTGTAAATATGGAAGAACAAAAGGCTGCATCAAGTTTCTGCTAGCTGATCACTGTGCA
GAAGTAGAACATGCAGTGAGAGGTTGTCTGATCATTTTTCGCATGTTTCTTGTTATC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------AGCGTGCTGGACAACTTGAAAGATTATGCTGTCAGGGCGCTGGTCAACGCG
GTCGACCACCTTGGCACCGTTGCCTACAAATTAACAGACCTGTATGAACAACAGGTTTCAGAGGTCTCAACTGTCGAGCT
GAAAGTAGCATCCTTGAACCAGGTACTGACTATTTTAGCAAGATAATTTGTGCTGATAGAGCTGCAGGATTTACAAGTGA
CACTTACTTTCCATGTTCAGCAAGTCCTGACTTGCCAAACTTACACCGATAAAGAAGGCCTTAGGCAGCAGCAGATGATC
GGAAACGCCACAAGACACCACAAACATTACATCGTACCAAGTAAGGATGTGTGATACAAACATGTATTTCTCAGCCCAAG
AAACGATTATCACCTAATTTGACTTGTTAAATTTTCCCTGAACTAGCGGCGGGAAACAAAAGAATGCAGGCCTTTTCTGA
GATGCAAACAGACGCCGAGTTTGACTTGAAGCCTAAACCTTATCCCTCAGGTGCCTTTTCTTGCTTCTGTGCGCACATTT
GGATTTTTGATGCCAAATACTTAGTGTACTAATGCAAAATGTTTTCGTTATTAGAGAAGACTCTTTTCTGGCACTTGGCT
TCAGAGAAGAACACCAAAACCAATGGAGAACACCAATCTGAATTAGGGTAAGTATGTCACGTCCATTTTTCTCCACTCTT
CTGAAATGGGGTATTTGATTTGTTGTCATCTGCTTTTGCAGCCATGGGGAAACGAAAACTACCAAGCCTACATCCAGTGG
CGGGTTCAACCTTACAGGTATTTAATTTATTTTGTTGCTTATAGCCCCAGTTGTGTGTTTTGCTTTTATAATTGGTACTA
AGTT-TACCTATTTAGGCAGATT-TTTGCATAGTTTATATCTGTGTGTACAGACAACAAGCATTTTATCTGAAACAACTT
ACATTTCAGGTAAGGAATTGTCCGTGTCTCCCTTGCCCAAGCGTCTGCAGTCGAATGTGAGCAGCTCGGACATTGTTACG
CGTAACATTGGCATGAAGGTAAACCATGATATGATGAAATATGTGCTTAGTATTAAGGCCTGTAATTCATTTGGTGGTGT
AAAACTTGTCTATTTCCCTCCACAGACAACCTATCTTGTGTACAG-----------------------------------
--------------------------------------------------------------------------------
----------------------------------------------AACTCTTGATTATATATTGGGGTTGCCTGATTTG
CATTTTCAGGATCAGCCTGGTGCAAGGCATTTGGCATCATTCAGTTCTCTCGACAACACAAGAGGGCGTCAAATCCAAAA
GGCTCCCGTCCGCACCAAAAGTATGCTAGCTGCTTTCTTTGTCAGGCACAGGTCCGGAAAGATGAAAAACGTCTCTGTTC
GTTGATCAACTGCAAACCTCCAGTTTGCTCCTTCCCGCCCCACCATGAAGTACATGCAACAAACTCACTCCACATTTCTT
ATATGACTATTTGCATCGTGTATGTTAGTGGTCTAGAGATAGACCTTATTTTCATGCCCTTTTCATCTATAAATTGATGA
AAAAAATTATACGGATATAGTCAGTCTTAAACCATCGTGTCTAGTCACTAGGCAGAAGTTCCAGAAGTTTTCAGTATAAA
TGAATGAGATGGAATGCATATGGGTATGTCAATGGCAAGTTCCTTTCATTTATATATAGATCATAAAGCGTGTCTGTAAA
GAACACAACCGAAGATTTGTATCTCCTTGAATGAATGTTCACAGATCTTTTTGTGTGGAAAACTATCGCCACTGGGTTTT
CAGGCATACTCACAAAGATTATTATTCAGTTGAGAGCGACGACGGGACCCTCCCGACCCACCCACCCCTCCCGCGTCGCC
CCCGTAGGAGACGGGGAGGGAACCCTAGCCGTCGCTGGCCTTCCTCCCACTTACCGACCTTGCCGATGCCACAGGGTGCG
CCCAGGCAAAGCTTGGCCGCCGGCGGCGGCGGGCCTCTTCGCTCCCTCGCGTGTGGCGCCGGTGCGGGCCGCTGCCACGG
GCCAACGTGCCGCGATTGGTGGGTCGCGACGGTGCTCCGAGTGCCCTCCCGGCGACGACAATAGGTGGCATCCATGGTGC
ATTGTGTTGCTTGCTGGAGGGGCGTGCTTGCCGCTGCTCATGACCAAATTTGGCGCGGAGTGTATTTGGCGGCGCGGGCC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>chr3D_421
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------GCAACCGAACCCAAAGGTACCAACACACCAAACATCTTGCAACCAAACAGCAACAG----
--------------------------------------------------------------------------------
--CCAAGTGCAGAGGACGAGCCACAGGACGGACGGCGGAGACAAACTCACTTTTTTCATCAAATCATCAGTGGAAAAAAT
TAAAGAGTA-------------------------------------CCGCGAAGGAAAAAGAGGCTGACAAAGCTTGCAC
TCGATGCCCCTAATCTGCTGCCGTCATTTGCCAAGTGT------------GTGGGTGGGTGCTGCGCCCGCCGCACATTG
ACTAGAACTTAAAGCGACTGGCAACCAACACGACCCCGTCCGCCGTCGGCATCCGCGCCCACCCTCACCTCCTCGCTCGC
TG-------------CCCCACTCCGCCACCTGCCTCCACTCCCGCACGCAGCCGGAGCCGGAGAGCAGCTACCTCCAATA
CGCGAGCTGCTGC------AGCACCCGCCAGGCGCGACAGCAGCAGAGGCGAATCGCATTCGCTACCTTGCTTCCTCCCC
TCCTGACGTGCCTTGGCCTCCCCGCTTCCCGTTCCCACCGACGACAGGAGCGAGCAGAGGACCGCGAT---------GCA
GCTGCAGGCGCCGCCCTCGTGGGTGCCCGGGCCCGACCCCGCCCGCCCTGCTCCCACCACCTTCGACGAGGCGTCCATGG
AGCGGAGCAAGAGCTTCGTCAAGGCGCTCCAGGTACGCCGCCGGCCAGGATCCTGGAGATCCCGCCGCTACCCGACTTGG
CTTTCGCCTCTATCGGCGCGCCGACAGATCCGCGTTTTGCGCTCCCTTTGTTTAGGTTGGCGGTAAGTGACTTGCGTCTG
TCGCGCGTGCAGGAGCTCAAGAACCTGCGCCCACAGCTCTACTCCGCCGCGGAGTACTGCGAGAAGTCGTACCTCCACAG
CGAGCAGAAGCATATGTGAGCTATTCTTGTCTCCACTGCGAGTCCCAGTTCTACCACTCAATTCTGCAGTATTCTGTAGC
AACTCGGTCGCAATTTCTTGGCAGTAACAACAACTTTGCATGTGTAGCAATCATTGTTTACTTGATGTTGCCAGCCGATG
TTTTAACCAAACTTTATGCCCAGCTTCTATTTTGGCGTTGTGAGTCTACCAATGATGCGCAATGGGTTTCTATGAAGCAT
TGATTGGTTCGGTAGTATGCTAGTAGCATATTTGCACCCATCTACCGACGAACTAGGAACAGACAAATCAAGGACAATTG
ATTGAGAAAAACTCTCCAGGTGTGGAGGCTTAAATGCGGAGACACCACTAGAGAATTAATCATGGGCAGTGAAGGTTGTA
GGAATTTTGGATTTCTTTGCACAACTTTTCATAATTGTTTAATTCAGATCTGCTATTTTAAGCCGTCGCCTGAGAAATAG
TTACTCCAAATTGTGCAACTACTTGATTCCCATTGGATAAAGAA---TCAACGCTCAGAATCGTCCACCTAGAAATAAGA
ATTTCTTGGTCGACTTAGAAATAAAGGTTACCTTGTTAATTTTAGTTGAATGGACGCGTCCATCTTCTGCATCTGACTGC
ACTGCAAAAGGAACCAAGGATTCTGTAAATAAGGAAGAACAAAAGGCCGCATCAAGTTTCTGCTAGGTGATCACTGCACA
GAAGTAGAACATGCAGCGAGAGGTTGTCTGATCATTTTTCGCATGTTTCTTGTTATC-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------AGCGTGCTGGACAACTTGAAGGATTATGCTGTCAGGGCGCTGGTCAACGCG
GTCGACCACCTTGGCACCGTTGCCTACAAATTGACAGACCTGTATGAACAACAGGTTTCAGAGGTCTCAACTGTCGAGCT
GAAAGTAGCATCCTTGAACCAGGTACTGACTATTTTAGCAAGAGAATTTGTGCTGATAGAGCTGCAGGATTTACAAGTGA
CACTTACTTTCCATGTTCAGCAAGTCCTGACTTGCCAAACTTACACCGATAAAGAAGGCCTTAGGCAGCAGCAGATGATC
GGAAACGCCACAAGACACCACAAACATTACATCGTACCAAGTAAGGACGTGTGATACAAACATGTATTTCTCAGCCCAAG
AAACGATTATCACCTAATTTAACTTGTTAAATTTTCTCTGAACTAGCTGCGGGAAACAAAAGAATGCAGGCCTTTTCTGA
GATGCAAACAGACGCCGAGTTTGACTTAAAGCCTAAACCTTATCCCTCAGGTGCCTTTTCTTGCTTCTGTGCGCACATTT
GGAAGTTTGATGCCAAATACTTAGTGTACTAATGCAAAATGTTTTCCTTATTAGAGAAGACTCTTTTCTGGCACTTGGCT
TCAGAGAAGAACACCAAAACCAATGGAGAACACCAATCTGAATTGGGGTAAGTATGTCACGTCCATTTTTCTCCACTCTT
CCGAAATGGGGTATTTGATTTGTTGTCATCTGCTTTTGCAGCCATGGGGAAACGAAAACTACTAAGCCTACATCCAGTGG
TGGGTTCAACCTTACAGGTATTTAATTTATTTTGTTGCTTATAGCCCCAGTTGTGTGGTTTGCTTTTATGATTGGTACTA
AG-T-TACCTATTTAGGCAGATT-TTTGCATAGTTTATATCTGTGTGTACAGACAACAAGCATTTTATCTGAAACAACTT
ACATTTCAGGTAAGGAATTGTCCGTGTCTCCTTTGCCCAAGCGTCTGCAGTCGAATGTGAGCAGCTCGGACATTGTTACG
CGTAACATTGGCATGAAGGTAAACCATGATATGATGAAATATGTGCTTAGTATTAAGGCCTGCAATTCATTTGGTGGTGT
AAAACTTGTCTATTTCCCTCCACAGACAACCTATCTTGTGTACTCCCTCCGTTCCTAAATACAAGTCTTTGTAGAGATTC
CACTAGATGGACTACATACGGAGCAAAATGAATGAATCTACACTTAAAATGCATCTGTATACATCCGTATGTGGTTCCTA
GTGGAATCTCTACAAAGACTTATATTTAGGAACGGAGGAAGTACAAAACTCTTGATTATATATTGGGGTTGCCTGATTTG
CATTTTCAGGATCAGCCTGGTGCAAGGCATTTGGCATCATTCAGTTCTCTCGACAACCCAAGAGGGCGTCAAATCCAAAA
GGCTCCCGTCCGCACCAAAAGTATGCTAGCTGCTTTCTTTGTCAGGCACAGGTCCGGAAAGATGAAAAACGTCTCTGTTC
GTTGATCAGCTGCAAACCTGTAGTTTGCTCCTGCCCGCCCCACCATGAAGTACATGCAACGAACTCAGTCCACATCTCTT
ATATGACTATTTGCATCTTGTATGTTAGT-GTCTAGAGATAGACCTTATTTTGATGCCCTTTTCATCTATAAATTGATGA
AAAAATTTATACGGATATAGTCAGTCTTAAACCATCGTGTCTAGTCACTAGGCAGAAGTT---------TTCAGTATAAA
TGAATGAGATGGAATGCATATGGGTATGTCAATGCTAAGTTCCTTTCATTTATATATAGATCATAAAGCGTGTCTGTAAA
GAAAACAACCGAAGATTTGTATCTCCTTGAATGAATGTTCACATGTCTTTTTGCATGGAAAACTATTGCCACAGATTTTT
CAGGCATACTCACAGAGATTATTATTCAGTTGAGAGCGACGACGGGACCCTCCCGACCCACCCACCCCTCCTGCGTCGCC
CCCGCAGGTGACGGGGAGGGAACCCTAGCCGTCGCTGGCCTTCCTCCCACTTACCGCCCCCGCCGCTGCCACACGG----
--------------------CGGCGGCGGCAGGCCTCTTCATCCCCTCGCGTGTGGCGCCGGTGCGGGCCGCTGCCACGG
GCCAGGGCACCGTGATTGGTGGGTCGCGGCGGTGCTCCGAGTGCCCTCCCGGCGACGACATTAGGTGGCATCTGTGGTGC
GTTGGGCTGCTTGCTGGAGGGGCGTGCTTGCCGCCGCTCGCGACCAAATCTGGCGCGGGATGTATTTGTCGGCGCGGGCC
ATGGGTGGCGCGGGGCCGGCGACCGCTGTGGGTCCTGGACGGTGGTGGCGGTTGGTCGT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S-----------------------------------------
-S-----------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S----------------------------S------------S-----------------------------------
--------------------------------------------------------------------------------
-------S-------------------------------------------------------------S----------
---------------------------------------------------------------S----------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
----------------S---------------------------------------------------------------
-S--------------------------------------------S---------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------S--------S--------------------------
---------------------S-----S-------------------------------------------S--------
--------------------------------------------------------------------------------
------------------------------S--------------S----------------------------------
-----S--------------------------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------SSS------S------S-------------------
---------------------------------------------------------------------------S----
-----------------S-----------------------------S--------------------------------
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>forward_194
--------------------------------------------------------------------------------
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--------------CAAGGCCAAGTAGACCCTGG----------------------------------------------
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----------------------------------------------------AGGAAGGATCGAGTCCGGAA--------
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-----------------------------TGAGATGGATGTGTGGCCAC-------------------------------
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----------------------------------------------------------------CGCAGGCCTTTTCTGA
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--------------------------------GCTAAAGCGTGCGGAGAATG----------------------------
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------------------------------------------------------------------------ACACTCTT
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----TGCTATCCATGTGCCAGAGC--------------------------------------------------------
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-TTAGGCAAAGTCTAGCCGCC-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------
