>input_sequence_27017
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-------------------------------------------------------------------------CAG--TT
TCCCTCCATTCCCTCGCGGAGAAAAAAAGGAGGAACCGCGGAAGTTCGCCGGAGATGTCGTCGGCGGCCACGAAGCTCGC
CAACGCGGCCGACGCTACCTCGGCGGAGGCCCAAACCCTCGTCCTGGTAAGAACCCCTTTGCCCCCCTCCCTCTCTCCCC
CACCAATCCCACCTCCGATTTCATCCAGCAAAACCCTAACCCCTCCCAAAATTCCCCAAATC------------------
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---------------------------------CGCAGGACATGCGCAAGGCGCTCAGCTCCATGAAGTCCCTCGCCGTG
GAGTACGAGAGGGCCGGCAAGCCCGACAAGGCACGCCACCGCTCCCCATTAGCCCCCAAATCCCCCGCCTCCCCTGGAAC
CCCCTAACGCCCCCGAACCGCGTGGATTTCTGCAGGTGAAGCAGCTGGAGGACGCGGTGCAGGAGCTGGTGGCCTCGTAC
GAGGACTGCGCGTACCTCGCCGAGGCGGTGAAGAAGGTGCCCGTGGCGTACCAGCCGTCTGACCAGGTGCGGGCCGTGGC
GCTTGTGT-----GTGGGGGCGTTCGAATTGGGGGCAAATTTGGGCTAACTCTCTGCACTCTGTTGGTTTGGGAAGGCGA
CTGATTTCAGAAAGCTCATCGAGTGGGAGGTTGAGAAGGTCAAGGGGGCCTCGC----------GATCGTCGGGACACAA
GGATCAGCTCATACGGCAGTTCAAACAGGCTGTTTGGGTATGTGCCTCAGAGAAGCCTCTTATTTCTGATTGTTCTGAAG
ATAATCTGCAATTGTGTGCTGTAGATGCATTTGCTAAGC---GAGGTCCTTCACCAAAGATGCGCACGAAAGTTGTTTAA
CTTCCTTTGGGAGACCTATGGCGAAGAATGTGTCTGTTTGTGTGTGATTTCGAAGTGCCTGACCTTTTGTGTGTTTGTGC
TCTGTCTCTGCAGGAGGTTCACCATGCAGGTCAACCGATGCCTGGTGACGAACAAGAGGAACTTGTTATGACCAGCACCC
AGAACAGCA----------------TCC----------------TAAATATGCAT--TGCCCATTAACCTTGAAGCCTAT
CATTGAGTTGGAAAATCCAGTTCGCTGGTAAGCAGTCGGTGCCTGGTTTTGTTTTCATACTCTTATGAAATTTGTGTTGT
CTGTGAGCATGCTTGAGCCATAATCGTTACTGTAAATGTTTGTTCAATGAGCACCCATTTCTTATCG---TGTTCCCACC
AGATAAAAACTGATCGAAGTTTTGTTTTCACACTGAAAAT-GAGCAAAGTTTGTAGGCACAATGCAATAGCTCATAGTGC
CATTCTACTCCTGTTAGTATTTGCCTCTTAA---CCCTTTCAGTCTCATTGAAAGCACCAGATTTGGTTGTCCTTGTTTT
TTAC----------------------------------------------------------------------------
-------------------------------------------------ATGCATACTATAG-AAAATTGTCAGAATTTG
CTTCCTCATCGTGTAGGATCCGCATGCTGTAAGATAAGCTTGCTCTT----------AATCCTGCATGTCAATAGAATTA
CTTCACAACTGCGAATCGAACAACTGGCATTGGTATCAAATCAAACCACTAACTATTAATTTTGATTTATTTGCTCAAGC
AAGGGGTTTCGCCAGTGGAAAGAATATGCAAAAGATGCTAGTAAATGCACACAGCCAAATATCTGCGGATGCTCAATTCC
AAATGGGTTTGTAGCCCCACTGTGTAGGATCCACATGCTATAAGAAACGCTTGTTCTTAATCCTGTGTGTCAGTAGAATT
AGTTCGCAACTGTGAATCAAGCAACTGGAATTGG--------CATCGATCAAACCATTAACTATTA---ATTTTGATCTA
TTTGATC-AGTAAGGGAGGGCAGGCCTGGCGCAGTGGTGAAGTCCTCCCCACTTGTGCCAAGAGGTCCTGGGTTCGAACC
AGCCTCTCTGCATTGCACTTTGCAGGGGTAAGACTAGGTTCCTATAATCCCTCCCCAGACCCCACCTTGTGTGGGAGCTT
CTATGCACTGGGTCTGTCCTTTTTTCCTATTTGATCAGTAAGGGGTTTCACCACTGGACGAAGTATACAAAAAT-TGGTA
GAAAATGCAGATCGCCAAAATATCTATGG-CTGTTCAATTCCAAATGGAATCGTTTCCCTATTGTGTAGGAGGATGCGTG
TGTCATAAGAAAACCTTGCTCCTTCTGTTAACACATGCTTTGCTTCAGTAGAACTAGTCTGCACCTGTGAATCGAACAAC
CAGCATTGCTATCTA--GTATCAAACAACTAGCTGTTGATTTTGATTTATTTGCTCAATTAAGTTTTTTTTTACCAATGG
ACGAAATATGCAAAACGCTAGAAATCACACGCAGCCAACATATCTTCAAATCTCCAGTTCCAAATACTAACATGGTGATG
TTTCCTTTCCCTCTGCAGCATGGATTGCAGGCACATATATGACAAGGATCCAATAATGAGCCACATCCGGAGGAGCAAAG
CTCCGAATTGCCCCGTTGCAGGTATGCGCAGTTGCTCTCAGCACCCT-TGCTCTCTCCTTTCACGAGGTCCCCTTA--CT
CCAGTTCATCTGTTCAAAACCAGGCTGCCCGGCGGTGCTACAAGTGGCGAGGATCTTCTGCGACACCTTCCTGCGTATGG
AAATCGAGGAGCTACGCTCGTCGAGGCCGTCCGCTCCGAACACCACGGAGGTAGAGGATATCTCGGACCAAGGGGAGGAC
GAGGCAGAGGACCTGATGGACGATGACGAGGACGAGTGATTAGGCGTCTAGAGAGATGAACCTTGTTGGATGCTCGGTAT
TATGTAG-GATGATGGTAGGT-TTGGTACTTTGTTCAGGTCACACCTGTGAGCACACGGGTTCCACATTTCCATGGCGTC
GGGTGTGTTCTGTGGGGATCGCGGGATTGATG------------------------------------------------
------------------------------------------TGTTCGTTCGCTCGTCTGATTGTTGTTTTTGATTGATT
GGCG----------------------------------------------------------------------------
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>chr1A_1_TraesCS1A01G396600
CAATATTATGAGTAATGCTACATCTACAAAAGGTTACTTAATTTTATTTTACAAAAGAAGTTGATGTGGGAGATTATGAT
TGGTAATAGGAGGATGAAGGGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAAACGTTTGAAATACTTTGTAGGTTTAACATTATTGC
AATATTATTATCCATACTATAGCGCAACCAAATGTACATTGTTATAATTTTTTGATGAAACATGAAAGATCTAACACTGC
CAATTCAACCTATATTATGAGCTACACGAACCTAACGAGTACTCCGTAACACAACTTGTAGAATGGTTCGCGCAAAGTAA
AAACCTTTTAAACTCGACCAGGCTCTTTAGTGTGTGAGTACTATCAAGTTTTTTTAGATGTCAAGCCGATTTTCTGAGTA
ATTTTTAAACTCGTGGGTATCTGAGTTATTTTTCCAACCCAGCTCCTCCGTTGTTGCTTGCTACCGGACTAACAACAGGA
ATCAAAATGAGGTTACAAGATAATTATTACAAAATGCCTGGTTGAGTGATTAAGTTGAAAGTTTCCATAGGCTGCCAAGA
ATTCGTGCAGAGAATATCAATAATATGAAGGCCAATTTGGGCTGGCCTAGTATTTTTGTTTTGAGCACTTTGGGCTGGCC
TAGTGGCCTCATAAGAAAAATAATG--CCCTCAAGGCCTGTACTGGGCTGGCATACTCTCTAGCCCACTTAGAAATTCTC
CTGGGCTTCGTA-------------------------------TACAAGCTATAGTCCACATCTCCGCCAGTCCAG--TT
TCCCTCCATTCCCTCGCGGAGAAAAAAAGGAGGAACCGCGGAAGTTCGCCGGAGATGTCGTCGGCGGCCACGAAGCTCGC
CAACGCGGCCGACGCTACCTCGGCGGAGGCCCAAACCCTCGTCCTGGTAAGAACCCCTTTGCCCCCCTCCCTCTCTCCCC
CACCAATCCCACCTCCGATTTCATCCAGCAAAACCCTAACCCCTCCCAAAATTCCCCAAATC------------------
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---------------------------------CGCAGGACATGCGCAAGGCGCTCAGCTCCATGAAGTCCCTCGCCGTG
GAGTACGAGAGGGCCGGCAAGCCCGACAAGGCACGCCACCGCTCCCCATTAGCCCCCAAATCCCCCGCCTCCCCTGGAAC
CCCCTAACGCCCCCGAACCGCGTGGATTTCTGCAGGTGAAGCAGCTGGAGGACGCGGTGCAGGAGCTGGTGGCCTCGTAC
GAGGACTGCGCGTACCTCGCCGAGGCGGTGAAGAAGGTGCCCGTGGCGTACCAGCCGTCTGACCAGGTGCGGGCCGTGGC
GCTTGTGT-----GTGGGGGCGTTCGAATTGGGGGCAAATTTGGGCTAACTCTCTGCACTCTGTTGGTTTGGGAAGGCGA
CTGATTTCAGAAAGCTCATCGAGTGGGAGGTTGAGAAGGTCAAGGGGGCCTCGC----------GATCGTCGGGACACAA
GGATCAGCTCATACGGCAGTTCAAACAGGCTGTTTGGGTATGTGCCTCAGAGAAGCCTCTTATTTCTGATTGTTCTGAAG
ATAATCTGCAATTGTGTGCTGTAGATGCATTTGCTAAGC---GAGGTCCTTCACCAAAGATGCGCACGAAAGTTGTTTAA
CTTCCTTTGGGAGACCTATGGCGAAGAATGTGTCTGTTTGTGTGTGATTTCGAAGTGCCTGACCTTTTGTGTGTTTGTGC
TCTGTCTCTGCAGGAGGTTCACCATGCAGGTCAACCGATGCCTGGTGACGAACAAGAGGAACTTGTTATGACCAGCACCC
AGAACAGCA----------------TCC----------------TAAATATGCAT--TGCCCATTAACCTTGAAGCCTAT
CATTGAGTTGGAAAATCCAGTTCGCTGGTAAGCAGTCGGTGCCTGGTTTTGTTTTCATACTCTTATGAAATTTGTGTTGT
CTGTGAGCATGCTTGAGCCATAATCGTTACTGTAAATGTTTGTTCAATGAGCACCCATTTCTTATCG---TGTTCCCACC
AGATAAAAACTGATCGAAGTTTTGTTTTCACACTGAAAAT-GAGCAAAGTTTGTAGGCACAATGCAATAGCTCATAGTGC
CATTCTACTCCTGTTAGTATTTGCCTCTTAA---CCCTTTCAGTCTCATTGAAAGCACCAGATTTGGTTGTCCTTGTTTT
TTAC----------------------------------------------------------------------------
-------------------------------------------------ATGCATACTATAG-AAAATTGTCAGAATTTG
CTTCCTCATCGTGTAGGATCCGCATGCTGTAAGATAAGCTTGCTCTT----------AATCCTGCATGTCAATAGAATTA
CTTCACAACTGCGAATCGAACAACTGGCATTGGTATCAAATCAAACCACTAACTATTAATTTTGATTTATTTGCTCAAGC
AAGGGGTTTCGCCAGTGGAAAGAATATGCAAAAGATGCTAGTAAATGCACACAGCCAAATATCTGCGGATGCTCAATTCC
AAATGGGTTTGTAGCCCCACTGTGTAGGATCCACATGCTATAAGAAACGCTTGTTCTTAATCCTGTGTGTCAGTAGAATT
AGTTCGCAACTGTGAATCAAGCAACTGGAATTGG--------CATCGATCAAACCATTAACTATTA---ATTTTGATCTA
TTTGATC-AGTAAGGGAGGGCAGGCCTGGCGCAGTGGTGAAGTCCTCCCCACTTGTGCCAAGAGGTCCTGGGTTCGAACC
AGCCTCTCTGCATTGCACTTTGCAGGGGTAAGACTAGGTTCCTATAATCCCTCCCCAGACCCCACCTTGTGTGGGAGCTT
CTATGCACTGGGTCTGTCCTTTTTTCCTATTTGATCAGTAAGGGGTTTCACCACTGGACGAAGTATACAAAAAT-TGGTA
GAAAATGCAGATCGCCAAAATATCTATGG-CTGTTCAATTCCAAATGGAATCGTTTCCCTATTGTGTAGGAGGATGCGTG
TGTCATAAGAAAACCTTGCTCCTTCTGTTAACACATGCTTTGCTTCAGTAGAACTAGTCTGCACCTGTGAATCGAACAAC
CAGCATTGCTATCTA--GTATCAAACAACTAGCTGTTGATTTTGATTTATTTGCTCAATTAAGTTTTTTTTTACCAATGG
ACGAAATATGCAAAACGCTAGAAATCACACGCAGCCAACATATCTTCAAATCTCCAGTTCCAAATACTAACATGGTGATG
TTTCCTTTCCCTCTGCAGCATGGATTGCAGGCACATATATGACAAGGATCCAATAATGAGCCACATCCGGAGGAGCAAAG
CTCCGAATTGCCCCGTTGCAGGTATGCGCAGTTGCTCTCAGCACCCT-TGCTCTCTCCTTTCACGAGGTCCCCTTA--CT
CCAGTTCATCTGTTCAAAACCAGGCTGCCCGGCGGTGCTACAAGTGGCGAGGATCTTCTGCGACACCTTCCTGCGTATGG
AAATCGAGGAGCTACGCTCGTCGAGGCCGTCCGCTCCGAACACCACGGAGGTAGAGGATATCTCGGACCAAGGGGAGGAC
GAGGCAGAGGACCTGATGGACGATGACGAGGACGAGTGATTAGGCGTCTAGAGAGATGAACCTTGTTGGATGCTCGGTAT
TATGTAG-GATGATGGTAGGT-TTGGTACTTTGTTCAGGTCACACCTGTGAGCACACGGGTTCCACATTTCCATGGCGTC
GGGTGTGTTCTGTGGGGATCGCGGGATTGATG------------------------------------------------
------------------------------------------TGTTCGTTCGCTCGTCTGATTGTTGTTTTTGATTGATT
GGCGAAGTTACTCTTTGTTCTTCTCCATTCACAAATGATTTGGAAATAGGAAAGTAGTGGAAAGTTGAGCTGCTGTCCAT
AGTCATGCATTCGTTGCACCACGGATTGTGACATATAAAAGAAGAGAAGAGATCCATCCCTGGTGAAGCAAAGGGATCGA
GGTCATAGGCATGAGAGGTCTCATCAGCGCGAACGAAGAGGCAAAGTGAACAGACAGGAGGATCCCTGGTCACACAAGTC
GACGAAAATAAAATGGAAGACACTATTTCCCTGCTGGGCCGTATGGACCTTGCTTTTGGTTCCTTCTTCATTTCGGCCCT
TCCTTATTAGGGGCTTGTTATCTCTTCCCTTCGGGGCTTCTAAAGGGCCGTGCTCCTTCTGCCATCATACTTGTTTTTTT
TAAAAAAAAAACACGTCAATGGCGGGCTTACGCCTGCCTGAACCATATATTATGAAAACATTGTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTAGATCGAGCGATGATGTGGATTCCTTAGGTTTCATTC
TGAAAAACCTTGGCGTTTCTTCGTTTCCAAATATTCTAAAGGAT
>chr1D_793
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------------------------------------------------------------------------TGCCAAGA
ATTTCTTGCAGAG-----AATAATTTGAAGGCCAATTTGGGCTGGCCTAGTTTTAAA-TTTTGAGCACTTTGGGCTGGCC
TAGTGGCCTCATACGAAA-AATATTTTCACTCAAGGCCTGCACA-GGCCGGACTACTCTGCAGCCCACTTAGAAATAGTA
CTGTTGCAAAAAAAATGAAACTTAGAAATAGTACTGGGCCTCGTACACGTGCTAGTCCACAGCTCCTGCAGTCCAG--TT
TCCCTCCATTCGCTCGCGGAGAAAAAAAAGGGGAACCGCGGGAGTTCGCCGGAGATGTCGTCGGCGGCCACGAAGCTCGC
CAACGCGGCCGACGCTACCTCGGCGGAGGCCCAAACCCTCGTCCTGGTAAGAACCCCTTTGCCCCCCTCCCTCTCTCCCC
CACCAATCCCACCTCCGATTTCATCCCGCAAAACCCTAACCCCTCCCAAAATTCCCCAAATC------------------
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---------------------------------CGCAGGACATGCGCAAGGCGCTCACCTCCATGAAGTCCCTCGCCGTG
GAGTACGAGAGGGCCGGCAAGCCCGACAAGGCACGCCACCGCTCCCCATTAGCCCCCAAATCCCCCGCCTCCCCTCGAAT
CCCCTAACCCCCCGAGCCGCAT-GGATTTCTGCAGGTGAAGCAGCTCGAGGATGCGGTGCAGGAGCTGGTGGCCTCGTAC
GAGGACTGCGCGTACCTCGCCGAGGCGGTCAAGAAGGTGCCCGGGGCGTACCAGCCGTCCGACCAGGTGC----------
GCTTCTGT-----GTGGGGGCGTTCGGATTGGGG--AAATTTGGGCTAACTGTCTGCACTCTGTTGGTTTGGGAAGGCCA
CTGATTTCAGAAAGCTGATCGATGCGGAGGTTGACAAGGTCAAGGGGACCTCGC----------GATCGTCGGGACACAA
GGACCAGCTCATACGGCAGTTCAAAGAGGCTGTTTGGGTATGTGCTTCAGAGA---CTCTTATTTCTGATTGTTCTGAAG
ATTATCTGCAATTGTGTGCTGTAGATGCATTTGCTAGGC---GAGGTCCTTCACCAAAGATGCGCACGGAAGTTGTTTAG
CTTCCTTTGGGATA-CTATGGCGAAGAATGTGTCTGTTTGTGTGTGATTTCAAAGTGCCTGACCTTTCGTGTGCTTGTGC
TCTGTCTCTGCAGGACGTTCACCATGCAGGTCAACCGATGCCTGGTGACGAACAAGAGGAACTTGTTATGACCAGCACCC
AGAACAGCA----------------TCC----------------TAAATATGCAT--TGCCCATTAACCTTGAAGCCTAT
CATTGAGTTGGAAAATCCAGTTCGCTGGTAAGCAGTCGGTGCCTGGTTTTGTTTTCATACTCTTATGAAATTTGTGTTGT
CTGTGAACATGCTTGAGCCATAGTCGTTACTGTAAATGTTTGTTCAATGAGCACCCATTTCTTATCG---TGTTCCCACC
AGATAAAAACCGATCGAAGTTTTGTTTTCACACTGAAAATGGAGCAAAGTTTGTAGGCACAATGCAATAGCTCATAGTGC
CATTCTACTCCTGTTAGTATTTGCCTCT-AA---CCCTTTCAGTCTCATTGAAACCACCAGATTTGATTGTCCTTGTTTT
TTACTCCCTCCGTCCCAAAATTCTTGTCTTAGATTTGTCTAGATACGGATGTATCTAATACTAAAACGTGACTTGATTCA
TCCGTATTTAGACAAATTTAAGACAAGAATTTTGAGACGGAGGGAGTACATGCATACTACAGAAAAATTGTCAGAATTTG
CTTCCTCATCGTGTAGGGTCCGCATGCTGTAAGATAAGCTTGCTCTT----------CATCCTGCGTGTCAATAGAATTA
CTTCGCAACTGCGAATCGAACAACTGGCATTGGTATCAAATCAAACCACTAACTATTAATTTTGATTTATTTGCTCAAGC
AATGGGTTTCGCCAGTGGAAAGAATATGCAAAAGATGCTAGTAAATGCACACAGCCAAATATCTATGGATGTTCAATTCC
AAATGTATTTGTAGCCCCACTGTGTAGGATCCACATGCTATAAGAAAAGCTTGTTCTTAATCCTGTGCGTCAGTAGAACT
AGTTCGCAACTGTGAATCAAGCAACTGGAATTGG--------TATCGATCAAACCACTAACTATTG---ATTTTGATCTA
TTTGATC-AGTAAGG-----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------AGTTTCACCACTGGACGAAGTATGCAAAAAT-TGGTA
GGAAATGCACA-CGCCAAAATATCTATGG-CTGTTCAATTCCAAATGGAATTGTTTCCCCGTTGTGTAGGAGGATGCGGT
TGTCATAA-----------TCCTTCTGTTAACACATGCTTTGCTTCAGTAGAACTAGTATGCACCTGTGAATCGAACAAC
CAGCATTGCTATCTACAGTATCAAACAACTAGCTGTTGGTTCCAAGTGGTAAC---------------------------
-------------------------------------------------------------------------------G
TTTCCTTTCCCTCTGCAGCATGGATTGCAGGCACATATATGACAAGGATCCAATAATGAGCCACATCCGGAGGAGCAAAG
CTCCGAATTGCCCCGTTGCAGGTATGCGCAGTTGCTCTTAGCG-CCCTTGCTCTCTCCTTTCACGAGGTCCCCTTA--CT
CCAGTTCATCTGTTC-AAACCAGGCTGCCCGGCGGTGCTACAAGTGGCGAGGATCTTCTGCGACACCTTCCTGCGTATGG
AAATCGAGGAGCTACGCTCGTCGAGGCCGTCCGCTCCGAACGCCACGGAGGTAGAGGATATCTCGGACCAAGGGGAGGAC
GAGGCCGAGGACCTGATGGACGATGACGAGGACGAGTGAT-AGTCGTCTAGAGAGATGGACCTGGTTGGACGCTCGGTGT
TCTGTAG-GATGATGGTAGGT-TTGGTACTTCGTTCAGGTCACACCTGTGAGCACACGGGTTCCACATTTCCATGGCGTC
GGGTGTGCCCTGTGGGGATCACGGGATTGATGTGGCTCCCCTGCCAATTACCTGAATCAACGTAGCAGGCTTAGCTGCGA
GAATATTATCGTTTTTTTGTGCTGCTTTGCATCAGTCTCACGTGTTCGTTCCCTCGTCTGATTGTTGTCTTTGATTGATT
GGTGAAGTTACTCTTTGTTCTTTACCATTGACAAATGATTTGGAAATA----------GGAAAGTTGAGCTGCTGTCC--
AGTCATGCATTCGTTGCACCACGGATTGTGACAG---AAAAAAAAAAAGAGATCCATGCCTGGTGAAGCAAAGGGATCGA
GGTCATAGGCATGAGAGGTCTCATCAGCGTGAACGAGGAAGCAAAGTGAACAGACAGGAGGATCCCTGGTCACACAAGTC
AACGAAAATAAAATGGAA--------------------------------------------------------------
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>chr1B_864
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---------------------------------------------------------------AGCACTTTGGGCTGGCC
TGGTGGCCTCATACCAAAAAATATTTTCCCTCAAGGCATGTACTGGCT-GGACTACTCTGCAGCCCACTTAGAAATAGTG
CTGGGCCTCGTATATACA------------------------GTACATGCTATAGTCCACAGGTCCGGGCAGTCCAGTTT
TCCCTCCATTCCCCCGCGGAGAAAAAAAAGGGGAACCGCGGGATTTCGCCGGAGATGTCGTCGGCGGCCACGAAGCTCGC
CACCGCGGCCGACGCTACCTCGACGGAGGCCCAAACCCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCAGGACATGCGCAAGGCGCTCAGCTCCATGAAGTCCCTCGCCGTG
GAGTACGAGAGGGCCGGCAAGCCCGACAAGGCACGCCGCCGCTCCCCACTAGCCCCCGAA--CCCCGCCTCCCCTCGAAA
CCCCTAACCCCCCGAGCCGCGT-GGATTTCTGCAGGTGAAGCAGCTGGAGGACGCGGTGCAGGAGCTGGTGGCCTCGTAC
GAGGACTGCGCGTACCTCGCCGAGGCGGTGAAGAAGGTGCCCGGGGCGTACCAGCCGTCCGACCAGGTGCGGGCCGTGGC
GCTTCTGC-----GTGGGGGCGTTCTAATTGGGGGCGAATTTGGGCTAACTGTCTGCACTCTGTTGGTTTGGGAAGGCGA
CTGATTTCAGAAAGCTGATCGATGCGGAGGTTGAGAGAGTCAAGGGGACCTCGC----------GATCGTCGGGACACAA
GGACCAGCTCATACGGCAGTTCAAAGAGGCTGTTTGGGTATGTGCTTCAGAGA---CTCTTGTTTCTGATTGTTGAGAAG
ATTATCTGCAATTTTGTGCTGTAGATGCATTTGCTAGGTGCTGAGGTCCTTCGCCAAAGATGCGCACGAAAGTTGTTTAA
CTTCCTTTGGGATACGTATGGCGAAGAATGTGTC-----GTGCGTGATTTCAAAGTGCCTGACCTTTTGCGTGCTTGTGC
TCTGTCTCTGCAGGATGTTCACCATGCAGGTCAACCGATGCCTGGTGATGAACAAGAGGAACTTGTTATGACTAGCACCC
AGAACAACA----------------TCC----------------TAAATACAG--TATGCCCATTGACTATGAAGCCTAT
AGTCGACTTGGAAAATCCTGTTCGCTGGTAAGCAGTCAGTGCCTGGTTTTATTTTCATACTA-TATGACTTTTCTGTTGT
CTTTGAACATGCTTGAGCCACACTCGTTACTGTAAATCTTTGTTCAAAGAAAATCCTTTTCTTATTATTATGTTCCCACC
AGATAAAAACTGATCAAAGTTTTGTTGTCAAACTGAAAATGGAGCAAAGTTTCTAGGCACAATTCAGTAGCTCATAGTGC
CATTCTATTTCTGTTTGTATTTGCCTCT-AAATACCCTTTCAGCCTCAGTGAAACCATCAGATTTGGTTTTCCTTGTTTT
TGAT----------------------------------------------------------------------------
-------------------------------------------------GTGCTTACTATAGAAAAATCATCAGGATTTG
CTTCCCTATTGTTTTTGATGTGCTTGCTATAAGGAAAACCTGCTCTTTCTGTTAATGAATCCTGTGTGTGAGTAGAACTA
GTTCACAACTGTGAATCGAACAACTGGCATTGGTATCG-ATCAAACCACTAACTATTGATTTTGATTTATTTGCTCAAGT
AAAGGGTTTCGCCACTGGACGAAATATGTGAAAGATGCTAGAAAATGCACACAGTCAAATATCTGTGGATGTTGAGTTCC
AAATGGATTTGTAGCCCGATTGTGTAGGATCGGCATGCTATAAGAAAAGCCTGCTCTTAATCCTGTGTGTCAGTAGAATT
AGTTTGCAACTGTGAATAGAACAACTGGCATTGGTATCGAACTATCGATGAAACCACTAACTATTAGTAATTTTGATTTA
TTTGGCCTAGTAGGG-----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GGTTTCACCACTGGACGAAATATGCTAAACAATGCTA
GAAAATGCACA-CAGCGAAAAGATCTGCATCTGTTCAATTGCTAATTGATTTGTTTCGCCATTGTGTAGGATCTGGGTGC
TC---TAAGAAAAGCTTGTTCCTTCTGTTAACAGATCCTTTGTTTTCAG-------------------------------
--------------------------------------------------------------------------------
------------AAACGCTGGAAATCGCACGTAGCTCACATATCTGGAGACATCCAATTCCAAATACTAATAGGGTGATG
TTTCCTTTCCCTCTGCAGCATCGATTGCAGGCACATCTATGACAAGGATCCAATCCTGAGGTACATCCGGACGAACAAAG
CTCCGAATTGCCCCATTGCAGGTATACGCAGTAGTTCTCCGCACCCCCTGTTCCTTCGTTTCACGAGGCCGTCCTCAGCT
TCAGCCCATCTGTTC--AACCAGGCTGCCCGGCGGTCCTGCAACCGGCGAAGATCGTCTGCGACACCTTCCTTCGCATGG
AGATCGAGGAGCTGCGGGCGTCGGGCCCGGCCGCTCCGAACGCCTCTGAGATAGAGGATATCTCGGACCACGACGAGGAC
GAGGACGAGGATCCGATGGACGAAGACGATGACGAGTGAT-ACGCGTCTGGAGAAACGAACCTTGGTGGATTCTTGGTAT
TTTGTAGGGATGATGATAGGTGTTGGTACTCTGTTTTCAGGTCGCAC---------------------------------
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>chr3B_1372
CCG-----------------------------------------------------------------------------
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--------------------GT-GGATTTCTGCAGGTGAAGCAGCTCGAGGATGCGGTGCAGGAGTTCGTGGCCTCGTAC
GAGGACTGCGCGTACCTCGCCGAGACAGTGAAGAAGGTGCCCGGGGCGTACCAGCCGTCTGACCAGGTGCGGGCCGTCGT
GCTCGTGTGTGGGGTGGGGGCGTTCGGATTGGGG--AAATTTGGGCTAACTGTCTGCAATCTGTTGGTTTGGGAAGGCGA
CTGATTTCAGAAAGTTGATCGATGCGAAGGTCGACAAGGTCAAGGGGACTGATTTCAAAAAGCTGATCGTCGGGACACAA
GGACCAGCTCATATGGCAGTTCAAAGAGGCTGTTTGGGTATGTGCTTCAGAGA---CTCTTGTTTCTGATTGTTGAGAAG
ATTATCTGCAATTGTGTGCTGTAGATGCATTTGCTAGGTGCTAAGTTCCTTAACCAAAGATGCGCACAAAAGTTGTTTAA
CCAAAG-----------ATGCTGAAGAATGTGTCTGT------GTGATCTCAAAGTGCCTGGCCTTTTGTGTGCTTGTGC
TCTGTCTCTGCAGGAGGTTCGCCATGCAGGTCAACCAATGCCTAGTGACGAACAAGAGGAACTTGTTATGACCAGCACCC
AGAACAACATCCAGACCTGACAACATCC----------------TAAATATAG--TATGCCCATTGGCTATGAAGCCTAT
AGTTGAGTTGGAAAATCATGTTCGCTGGTAAGCAGTCAGTGCCTAGTTTTATTTTCATACTC-TACGAAATTTCTGTTGT
CT------------------------------------------------------------------------------
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>chr4B_1372
CCG-----------------------------------------------------------------------------
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--------------------GT-GGATTTCTGCAGGTGAAGCAGCTCGAGGATGCGGTGCAGGAGCTCGTGGCCTCGTAC
GAGGACTGCGCGTACCTCGCCGAGGCGGTGAAGAATGTGCCCGGGGCGTACCAGCCGTCTGACCAGGTGCGGGCCGTGTT
--------------------------------------------GCTAACTGTCTGCACTCTGTTGGTTTGGGAAGGCGA
CTGATTTCAGAAAGCTGATCGATACGAAGGTCGAGAAGGTCAAGGGGACTGATTTCAGAAAGCTGATCGTCGGGACACAA
GGACCAGCTCATACGGCAGTTCAAAGAGGCTGTTTGGGTATGTGCTTCAGAGA---CTCTTGTTTCTGATTGTTGAGAAG
ATTATCTGCAATTGTGTGCTGTAGATGCATTTGCTAGGTGCTGAGTTCCTTAACCAAAGATGCGCACAGAAGCTGTTTAA
CCAAAG-----------ATGCTGAAGAATGTGTCTGT------GTGATCCCAAAGTGCCTGGCCTTTTGTGTGCTTGTGC
TCTGTCTCTGCAGGAGGTTCACCATGCAGGTCAACCGATGCCTGGTGACGAACAAGAGGAACTTGTTATGACCAGCACCC
AGAACAACA----------------TCCAAACCTGACAACATCCTAAATATAGTATATGCCCATTGACTATGAAGCCTAT
AGTTGAGTTGGAAAATCCTGTTCGCTGGTAAGCAGTCAGTGCCTGGTTTTATTTTCATACTC-TACGAAATTTCTGTTGT
CTTTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------
>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
---SS-SSSSSSSSSSSS------S--------------------------S--SSSS----------------------
-------------S------SS--S-----------------------S--SS------SS---------------SS-S
------S----------------------------------------S-------------S-----S------------
----------------------------S-S----------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S---S
--------S----SSSS-SSSSS---------------------------------------------------------
-------------------------------------------S------------------------------------
---------------------------------------------------S----------------------------
----------------S-----SSS----------------------S--------------------------------
---S---------------------S-------------------S-------SSS------------------------
--S---------------------------------S-------------------------------------------
------------S--------------------------------------S---------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S---------------S---------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S-------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--S--------------------------------------------------------------S-----S--------
------S----------------------------------------S--------------------------------
------------------------------------------S-------------S-----------------------
---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S-------------
---------S-S---------------------------------------S-------S------------------SS
-------------S----S---------------------------------------S---------------------
--------------------------------------S--SSS-S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS-------S------S----S---SS--------SS-S-SS----S-------------S-S-------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
---------------S----------------------------------------------------------------
-----------------------------------------S--------------------------------------
-----S----------------------------------S---------------------------------------
-S------------------------------------------------------------------------------
-------SS-----------S-----------------------------------------------------------
---------------------------------------------------S----------------S-----------
--S-------------------SS-----S------------------SSSSSSSSSS--------------------SS
---------------------------------SSSS---S--S-S-----------S----------------------
-----------------------------S------S--S----------------------------------------
S-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_710
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TTGTTGCTTGCTACCGGACT----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------
>reverse_2197
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AGCGAGGTCCTTCACCAAAG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------
>forward_2048
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GGTTGAGAAGGTCAAGGGGG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>reverse_3441
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
AGCCTCTCTGCATTGCACTT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>forward_3415
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------GGTGAAGTCCTCCCCACTTG-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------
>reverse_4967
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------AAAAACACGTCAATGGCGGG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
