>input_sequence_26927
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-----------------------------------------------------------ATGCGGTCGCGCCGGCCA---
CCGGCGGCGGCCCTCGCCG---------TCCTCGCCATCCTCGCGGCGTGGGGCGCGGCGACGGCCGACCTCGCGTCCGA
CGCGCGGGCCCTCGTCGCCTTCCGGGCCGCGGTGGGCCAGCGCGTGGCCTGGAACGTGGCCGACCCCACCACCGTCTGCG
CCTGGACGGGGGTCACCTGCGAGGCCGGCCGCGTGGCGGCGCTGCGCCTCCCGGGGGCCGCGCTGGCGGGCGCCGTCCCG
GCGGGCTCCCTCGGGAACCTCACCGCGCTGCACACGCTCAGCCTCCGCCTCAACGCGCTCCGCGGGGCCCTCCCCGCCGA
CTTCGCCTCCATGGCCGCGCTCCGCAGCGTCTTCCTCAACGGGAACCGCCTCTCCGGCGACTTCCCGGCGCCCTTCCTCG
CGCTCCCCGCCCTCGTCCACCTCTCGCTCGGCGGGAACGGCCTCTCCGGCGCCATCCCGCCGGCCCTCGCCAACCTCACG
CGGCTCAAGACGCTGCTCCTCGAGGAGAACCGCTTCGTCGGCCAGATTCCCGACCTCCCGCTGCCGCAGCTGCGCGAGTT
CAACGTCTCCTTCAACCGGCTCAACGGATCCATCCCCGCCTCGCTCCGCTCCAAGCCGCGCGCGGCGTTCCTCGGGATGT
CGTCCCTCTGCGGCGGGCCCCTCGGCCCTTGCCCTGGCGAGGCCCCTCCTC---CTTCTCCGGCTCCGGCGGGGAGGACG
CCCTCGCCGACAACACCGTCGGCGAACATCCCCAACAGCGGAAACGACAAACAAACTGACAAGAAGGGCAACAGGCTCTC
CGGCGGCGCCATTGCCGGAATCGCCATAGCCTCCGTCGTCGGCGCCGCGCTTCTCCTGTTCCTTCTCATCTGCCTCTGTC
GCAGGTCGGGGCGCACCAAGACACGGGCTCTCGAGATGCCGCCTCCATCTCCATCCCCCGCCGTCATCCCCGGCGGCCGA
AAACCCCCAGAGTTGCCCAGCGGCGCGGCCGTGGCGCCTATGGCTACCGTGGGCCACCCCAGTGGT---CAATCGACTTC
AGGGAAGAAGCTGGTCTTCTTCGGGTCAGCGGCCGCCGTCCAACCGTTCGACTTGGAGGACCTGCTCCGCGCGTCGGCCG
AGGTCCTTGGCAAAGGTGCCATCGGGACGACCTACAAGGCTGTGCTTGAATCCAGCGCTACCGTGGCGGTGAAGCGGCTC
AAGGATGTCACCATGTCTGAGCCAGAGTTCCGTGAGCGCATTGCGGACATTGGCGAGCTTCAGCACGAGTTCATTGTGCC
TCTCCGTGCTTACTACTACAGCAAAGATGAGAAGCTGCTTGTGTACGACTTCATGCCCATGGGGAGCCTTTCTGCAGTCT
TGCACGGTGAGAATTCCACATCCCAGTTCCTTTACAGTTTTTCTGTACTCATACTCTGATCATTATATTA---CTGTTCT
GCATATGTTGTGCTCGTGCTTGTGTGTATCTTATTTTCGCATTTTTCGTCCATGGCGATGGTAGAGTGGTACTTGATTTT
CTCGTAAATGTGTGAGAATTGGATTGCAGTTGTTGAGGGGCGATTGTCTTGTACTATATCCATTCCGAAATATAAGATGT
TTTGGCTGTTTAAATTGAACCAACCGGACGTCTTATATTTAGAAACAGAGGGTGTAGCTATTATTACATCTGTCATGGCT
TGATTATCTCTAGTCTAGGTGTGTCTTGTCGAAGGCGACACGTCAAGCTAATTTTGATGCAGATCTTGTTTATTTGCTTG
ATATCCA--AAGTATTTGGATTTTAAGTGTTCTTTATTGGGTATTATTATTAAAATCATATTCTGACTATTCTGGCTGCT
ATTCCTTGTGGTCTGAGACTATGTTTATGGCTAGGATACTTGTATTGCAGTCAACTGCTCCCTTTCAGGTTTGGGGTTAC
CAATCTGCTCCAGTTTTGCAGAATGTTG-ATAGAACTGTTGATTGCTTTTTATAGTCCCATATTCTTTCCTCAATTGTGG
TTAAGTCTATTCTTTGTTTGTTTACTTTAGGTCTATTCTTTGTTTGTATAC-TTTGTGTTGATTAGACGAAACAAAATCT
TGGGAAGCTGTTGTAGTTGGTAGAGCAGTAGTTTTTTCATTGATTATGTTTGTATCTTCATTGTGTCACTTGACCATGTA
ACAGATGAACCTTGAACTCTAATCTCACACGGTGTTGATCATTTTTTGTCACGCAGGGAACAGAGGTTCTGGTCGCACCC
CACTTGACTGGACGATAAGATCAAGCATTGCCCTTGCTGCAGCCCGTGGGATCGAGTACATCCACTCTACAAGCTCTTCG
ACTTCGCACGGCAATATCAAGTCATCCAATATCCTCCTGTCGAAGTCGTATCAAGCACGTGTTTCAGACAATGGCCTTGC
CACCCTTGTTGGTTCATCATCGTCTGGACCTTCTCGCGCCAGTGGATACCGTGCTCCAGAGGTTACCGATCCCCGGAGGG
TGTCCCAGAAGGCTGATGTGTTCAGCTTTGGTGTTCTCCTGCTCGAGCTGCTCACCGGCAAGGCCCCCAGCCAGGCTGCT
CTTAACGACGAGGGCGTCGACCTGCCCAGGTGGGTGCAGTCCGTCGTGCGCTCTGAGTGGACTGCGGAGGTGTTTGACAT
GGAGCTCCTGAGGAACCAGAGCTCCGAAGAACAGATGATTCAGCTTCTACAACTCGCTATAGACTGCGTTGCCCAGGTCC
CAGACGCCCGTCCGACGATGTCCCATGTCGTTGTGCGGATCGAGGAGATCAAGATGTCAGGTGGAAGCACCGAAGAAACT
AATCAACAACAG---AGCACCCTGAATCAGGGCGATGAGATGGTCGAGGGCCCCTCCTCGCCCTGA--------------
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>chr4D_1_TraesCS4D01G046900
ACCACTGCCGCACGACAA--------------------------------------------------------------
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----TCCAATCCAAGCGTCCGTTGTGACGACAGACGGACGCTGTGGT---ACCAGTCAACACGGAGAGGCCGCTCTGACC
TTTTCAGGCGACCTTTCATCAGCGGCGGCCGACCGGTGGGCCGGATCGATCGATCGCCGGAAATTCT-CAGGCAAA-CGC
TGGAAGAGCAGTAAATATTAACCAAGTATACGCTCCAGAATTGGCACGGAGGTAAAGAAAACCGCAGTGAAAATCAGGAA
GAAAGTGAAACTGACGCGGCTGCTCCAGCTCAG-AACAATCCCTCCCTGCCCGGCTGCCCCCGCAGCGCAGCGCACGCGG
AGCAGCACGCATTTGTTCGGCGCCCGCCCCGAGGCAGTCCGGTGTCGCAATCCCGTCGT-CCCCCAGTCCCGTCCCCGTC
AAGCGGAATCTGGGAATCCC-CTCGCCGGGAAGGGAACCGAGCGAACCAAACAGACGAGCCAACGCGCATTCCCACCCCC
GTCTCCGTCAGCGGGCGCGGCCGCCCACCAAACCCGAACCCCCGCGGAATAAAAC------------CCGGCCGAGAGGC
CGTGCCGCCAGATCCGCACGGGAGTTTCTAGGGTTTTTCCCTCCCTCCCTCCC---------------------------
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--------------------------------------------------CCCGCCGACCCACCCAACCCCAGCCCCATT
CCTCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCCCGCCCCTCCACCCACACCC----------------CACCGCCGCGATGCGGTCGCGCCGGCCA---
CCGGCGGCGGCCCTCGCCG---------TCCTCGCCATCCTCGCGGCGTGGGGCGCGGCGACGGCCGACCTCGCGTCCGA
CGCGCGGGCCCTCGTCGCCTTCCGGGCCGCGGTGGGCCAGCGCGTGGCCTGGAACGTGGCCGACCCCACCACCGTCTGCG
CCTGGACGGGGGTCACCTGCGAGGCCGGCCGCGTGGCGGCGCTGCGCCTCCCGGGGGCCGCGCTGGCGGGCGCCGTCCCG
GCGGGCTCCCTCGGGAACCTCACCGCGCTGCACACGCTCAGCCTCCGCCTCAACGCGCTCCGCGGGGCCCTCCCCGCCGA
CTTCGCCTCCATGGCCGCGCTCCGCAGCGTCTTCCTCAACGGGAACCGCCTCTCCGGCGACTTCCCGGCGCCCTTCCTCG
CGCTCCCCGCCCTCGTCCACCTCTCGCTCGGCGGGAACGGCCTCTCCGGCGCCATCCCGCCGGCCCTCGCCAACCTCACG
CGGCTCAAGACGCTGCTCCTCGAGGAGAACCGCTTCGTCGGCCAGATTCCCGACCTCCCGCTGCCGCAGCTGCGCGAGTT
CAACGTCTCCTTCAACCGGCTCAACGGATCCATCCCCGCCTCGCTCCGCTCCAAGCCGCGCGCGGCGTTCCTCGGGATGT
CGTCCCTCTGCGGCGGGCCCCTCGGCCCTTGCCCTGGCGAGGCCCCTCCTC---CTTCTCCGGCTCCGGCGGGGAGGACG
CCCTCGCCGACAACACCGTCGGCGAACATCCCCAACAGCGGAAACGACAAACAAACTGACAAGAAGGGCAACAGGCTCTC
CGGCGGCGCCATTGCCGGAATCGCCATAGCCTCCGTCGTCGGCGCCGCGCTTCTCCTGTTCCTTCTCATCTGCCTCTGTC
GCAGGTCGGGGCGCACCAAGACACGGGCTCTCGAGATGCCGCCTCCATCTCCATCCCCCGCCGTCATCCCCGGCGGCCGA
AAACCCCCAGAGTTGCCCAGCGGCGCGGCCGTGGCGCCTATGGCTACCGTGGGCCACCCCAGTGGT---CAATCGACTTC
AGGGAAGAAGCTGGTCTTCTTCGGGTCAGCGGCCGCCGTCCAACCGTTCGACTTGGAGGACCTGCTCCGCGCGTCGGCCG
AGGTCCTTGGCAAAGGTGCCATCGGGACGACCTACAAGGCTGTGCTTGAATCCAGCGCTACCGTGGCGGTGAAGCGGCTC
AAGGATGTCACCATGTCTGAGCCAGAGTTCCGTGAGCGCATTGCGGACATTGGCGAGCTTCAGCACGAGTTCATTGTGCC
TCTCCGTGCTTACTACTACAGCAAAGATGAGAAGCTGCTTGTGTACGACTTCATGCCCATGGGGAGCCTTTCTGCAGTCT
TGCACGGTGAGAATTCCACATCCCAGTTCCTTTACAGTTTTTCTGTACTCATACTCTGATCATTATATTA---CTGTTCT
GCATATGTTGTGCTCGTGCTTGTGTGTATCTTATTTTCGCATTTTTCGTCCATGGCGATGGTAGAGTGGTACTTGATTTT
CTCGTAAATGTGTGAGAATTGGATTGCAGTTGTTGAGGGGCGATTGTCTTGTACTATATCCATTCCGAAATATAAGATGT
TTTGGCTGTTTAAATTGAACCAACCGGACGTCTTATATTTAGAAACAGAGGGTGTAGCTATTATTACATCTGTCATGGCT
TGATTATCTCTAGTCTAGGTGTGTCTTGTCGAAGGCGACACGTCAAGCTAATTTTGATGCAGATCTTGTTTATTTGCTTG
ATATCCA--AAGTATTTGGATTTTAAGTGTTCTTTATTGGGTATTATTATTAAAATCATATTCTGACTATTCTGGCTGCT
ATTCCTTGTGGTCTGAGACTATGTTTATGGCTAGGATACTTGTATTGCAGTCAACTGCTCCCTTTCAGGTTTGGGGTTAC
CAATCTGCTCCAGTTTTGCAGAATGTTG-ATAGAACTGTTGATTGCTTTTTATAGTCCCATATTCTTTCCTCAATTGTGG
TTAAGTCTATTCTTTGTTTGTTTACTTTAGGTCTATTCTTTGTTTGTATAC-TTTGTGTTGATTAGACGAAACAAAATCT
TGGGAAGCTGTTGTAGTTGGTAGAGCAGTAGTTTTTTCATTGATTATGTTTGTATCTTCATTGTGTCACTTGACCATGTA
ACAGATGAACCTTGAACTCTAATCTCACACGGTGTTGATCATTTTTTGTCACGCAGGGAACAGAGGTTCTGGTCGCACCC
CACTTGACTGGACGATAAGATCAAGCATTGCCCTTGCTGCAGCCCGTGGGATCGAGTACATCCACTCTACAAGCTCTTCG
ACTTCGCACGGCAATATCAAGTCATCCAATATCCTCCTGTCGAAGTCGTATCAAGCACGTGTTTCAGACAATGGCCTTGC
CACCCTTGTTGGTTCATCATCGTCTGGACCTTCTCGCGCCAGTGGATACCGTGCTCCAGAGGTTACCGATCCCCGGAGGG
TGTCCCAGAAGGCTGATGTGTTCAGCTTTGGTGTTCTCCTGCTCGAGCTGCTCACCGGCAAGGCCCCCAGCCAGGCTGCT
CTTAACGACGAGGGCGTCGACCTGCCCAGGTGGGTGCAGTCCGTCGTGCGCTCTGAGTGGACTGCGGAGGTGTTTGACAT
GGAGCTCCTGAGGAACCAGAGCTCCGAAGAACAGATGATTCAGCTTCTACAACTCGCTATAGACTGCGTTGCCCAGGTCC
CAGACGCCCGTCCGACGATGTCCCATGTCGTTGTGCGGATCGAGGAGATCAAGATGTCAGGTGGAAGCACCGAAGAAACT
AATCAACAACAG---AGCACCCTGAATCAGGGCGATGAGATGGTCGAGGGCCCCTCCTCGCCCTGATCTCTAATGGCATG
AGAGAAAGGAGCCGGCTGCCT--GTTGCTGTAG-CCCCATTCATTCCGTTCATAGACTTGACGAATG----CTATCTTCT
T---CGACGGCGGAGCCGGCTGTTTTTTCATCTCTTCCTTTTAGCGAACATCGGATTCGTTGTCGTCGTCGTC------T
TGGTGTTGTTGACTGACTGTGTCTG-TTGTGTGGTGGGTGATTGC---GTGGTGGTGTTTAGGGATGGAATGCATGC---
-CCAACTGTGCGATTGCTTAATTTGTCTAGCTATTGTTCTAGCTGATTAGGTTGGTTCTTTAGCTGTCCCCATGTACTTA
CTCAGCCCGATCAAATTGCCTGGAACTCGTTGGCGAAAACC---------------------------------------
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----------------------------ATTGGTGAGTTTACTTGCCTGGTGTCTGTCCTGTGGATCGAGTTGTCGCCGA
TGGGCATGGCCAGTTTGGCTGTGTGTGTGTGGGTCATGCGTGGTGCTTTGGATGGCTCCAGTTGCTGTTGAAAGCTACTG
CGTGCTGTGTCTGTCTCGATCCGGGTCGGGTGGCACGGCTTCCGGCTTTCGGCGGGGCGAGCGGGACTGTTTTGAACTGG
CAGGGGCG------------GGGAGGGAAACTGAATTGAATTTCGCCTGATGCGCATAGCGACTTGCCTGCTCCTCATCA
TTGATTCTCATTGTTGATTAACAGTTGGGAGGTACAGCCATGTTGGGATCC-ATCCATCGGTCGAGAGAGCAAAACCAGA
GGTTCTGTACACGCTCGATGATGATTATGATTCAAAGCTATCATCTTAGTTGTTGTAGTTGCTGTGTGGATGATCCAAGC
GCTGAATCTCGTAGCGTTTCTAGGTCCC--------------GGTAGATGGCAAGCGCTCAACGAACAAGCATCATCCCT
GGGGACTTGGTTCTGTGCACGCGACAGCGCTAGGACCCTAGCG-----GCGTGCGTACGTGTCTGTGCTGTGCACGGAAC
TGACCGATGTCGGGGCGGGTTTCACTACGTTTCAATGGTTCTGGTAGCCTGGGCCACCTACAATTTTGG
>chr4A_1
TATTAACCATGTATACGCTTCAGAATTGGTATCGAGGTAAAGAAAACTGTACAGTGAAAATCAGGAAGAGAGTGAAACTA
ACGCGACTGCTCTAGCTCAGAACAATCCCTGCCTGCCCCCGCAGCGCACGCGGAGCAACACGCATTTGTTCGGCGCCCGC
CCCGAGGCAAGGAAACCTCTGCAGTGCCGCAGTCCCGTCGTTCCCCAATCCCGTCCCCGTCAAACGGAATCTAGGACCCC
CTCGCCGAGAAGGGAACCGAGCGAACCAAACGAACCAACGCGCATTCTGACCTCCGTCCATCCATCCATCGGGGTCAGCG
CGGCGCCGCCGTCCACCAAACCCCAACCCCCATGGAATAAAACCCGCCCGTCGTGCCGCCAGATCCGCACGGGAGTTTCT
AGGGTTTTTCCTTTTTTTTACTAGTGCATTCATATGTATATTCAAGTAGTATTTTATTAACTATTTGCAATGTGTTTTGA
CAAAGAAAACTACTATCCTTGTAATGTTGCCCCAAGTTGGTCAAATTCTAGATCCGCCACTGCATGACGCTATCCTCTTT
GGTTCCTCGTCATTAATACAGGAGTACTTCCCATGTTCCTAATTAGGTCGCACATAACTTTGGACGTCAATACTAAGGAG
CGAACAAGAGGGCAACGACCGATTTTGTCAGACGGTCTTACCCTAGTTGAGATTGCTATACCCCCCCCCCCTCCCCCCCC
CCACACACACTCCCCCGTAACCATACGATTGAATTCACACGCTTGCAATGGCCATAGCCTCGCCCGGCGCTTCACCTTCC
CCGTGCAACACGCGCGTGTAGTTCGCCCAAGCGCGCCAAGGGAGATGACGTAAGGGAGAAGCCGTCTCTGCCGCGCCATA
AACCGCAACAAACACTAATTTAGAACCATCCTCTTTTGTTTCGTAGGCATTGATGACCCATTGTGAAGGAAACAAATTAG
AAAAGACTTAGATGAAAACCTTTTTAGCTTTTGACCCCTTCAAACACTCGTATTTTGTCATCGCCTCGCCGGCAGAATCC
GTCTAGCTCCGCCACTGGACGCAGGAGTAGATGAACGAACCCTGCCAAACGCTGAATACGGCAAACACGTTCTGTAATTC
CCAATAGACAGACGTGTTATGTTACACCAGAACAGAAAACGGCTGCTGATCGCTGAATGAAAGCGCCAGCAAAGCAAGGT
TTTTCACCCTGCGGGGATGATGACGCAGGACGGGATCGAGCGACGAACACGTAGCCTGGGAGGACGACACGGAGACACGT
GGCGCCAGTGACGCTCATCTGCCAGATGGCGATGGTTTCGCCCGCCCACACCCAGCCACGCCGACCCAAAGTGGTGCTTT
GTAACACCCGGCACGGCAAGGGTCTCACGCTGGCCAATGACGAGACGATCATCGTGTAAAAAGTCGCCCGCAATCGGCCG
GTAATCCACCGGCCGGCACGTGCGCGGCATCACAGAATCCGCTTCCTTGCTTGCTCCGGTCGGTTCACCAGTGCCGCACG
GCAGTCCAATCCAAGCGTCCGTTGTGACGACAGACGGACGCCGTGGCAGCAGCAGTCAACACGGAGAGGCCGCTCTGACC
T-----------------------------------------GGACCGACCGATCGCCGGAAACAGCACAGGCAAA-CGC
TGGAGGAGCAGTAAATAAATATTAACCATGTAAGGATAAATGAAACCGTAGGGAGGGGG---------GAAAATTAGGCA
GAGAGTGAAACTGACGCGGCT---------CAG-AACAATCC-------CCCC-------------CGCAGAGCACGCGG
AGCGGCGAGGCCTCTG-----------------------CGGTGTCGCGATCCCGTCGT-CCCCCGGTCCCGTCCCCGTC
AAGCGGAATCTAGGACG------------------------------------GACGAGCCAACGCGCATTCCC------
------------GGGTGCGGCCGCCCGCCGAACCCCAACCCCCGCGGAATAAAAC------------C------------
CGTGCCGCCAGATCCGCACGGGAGTTTCTAGGGTTTTTCCCTCCCTCCACT-----------------------------
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----------------------------------------------------------CCCACCCAACCCCAGCCCCATT
CCTCGCTCGCTGTTCAGCAGCCCGCCCCCCAAACCGGAACAGCCACCCCACACCGCCCGCGCCCATTC------------
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------------------------------CCC----------------CACCGCCGCGATGCGGTCGCGGCGGACACCG
CCGGCGGCGGCCCTCGCCG---------TCCTCGCGCTCCTCGCGGCGTGGGGCGCGGCGACGGCCGACCTCGCGTCCGA
CGCGCGGGCGCTCGTCGCCTTCCGGGCGGCGGTGGGCCAGCGCGTGGCCTGGAACGTGGCCGACCCCACCACCGTCTGCG
CCTGGACGGGGGTCACCTGCGAGGGCGGCCGCGTGGCGGCGCTGCGCCTGCCGGGGGCCGCGCTGGCGGGGGCCGTCCCG
GCGGGCTCGCTCGGGAACCTCACCGCGCTGCACACGCTCAGCCTCCGCCTCAACGCGCTCCGCGGGGCCCTCCCCGCCGA
CCTCGCCGCCATGGCCGCGCTCCGCAGCGTCTTCCTCAACGGGAACCGCCTCTCCGGCGACTTCCCGCCGGCCTTCCTCG
CGCTCCCCGCCCTCGTCCACCTCTCGCTCGGCGGGAACGGCCTCTCCGGCGCCATCCCGCCGGCGCTCGCCAACCTCACG
CGGCTCAAGACGCTGCTCCTCGAGGAGAACCGCTTCGTCGGCCAGATTCCAGACCTCCCGCTGCCGCAGCTGCGCGACTT
CAACGTCTCCTTCAACCGGCTCAACGGATCCATCCCCGCCTCGCTCCGCTCCAGGCCGCGCGCGGCGTTCCTCGGGATGT
CGTCCCTCTGCGGCGGGCCCCTGGGCCCTTGCCCTGGCGAGGCCCCTCCTC---C---TCCGGCTCCGGCGGGGAAGACG
CCCTCGCCGACAACACCGGGGACGAACATCCCCAACAGCGGAAACGACGAACGAAATGACAAGAAGGGCAACAGGCTCTC
CGGCGGCGCCATTGCCGGAATCGCCATAGCCTCCGTCGTCGGCGCCGCGTTTCTCCTGTTCCTTCTCATCTGCCTCTGCC
GCAGGTCGGGGCGCACCAAGACACGGGCCCTCGAGATGCCGCCTCCGTCTCCATCCCCCGCCGTCATCCCCGGCGGCCGA
AAACCCCCGGAGTTGCCCACCGGCGCGGCCGTGGCGCCTATGGCTACCGTGGGCCACCCCAGTGCTCAACAATCGACTTC
AGGGAAGAAGCTGGTCTTCTTCGGGTCGGCGGCCGCCGTCCAACCGTTCGACTTGGAGGACCTGCTCCGCGCGTCGGCCG
AGGTCCTTGGCAAGGGTGCCATTGGGACGACCTACAAGGCGGTGCTTGAATCCAGCGCTACCGTGGCGGTGAAGCGGCTC
AAGGATGTCACCATGTCCGAGCCTGAGTTCCGTGACCGCATTGCGGACATTGGCGAGCTTCAGCACGAGTTCATCGTGCC
TCTCCGTGCTTACTACTACAGCAAAGATGAGAAGCTGCTTGTGTACGACTTCATGCCCATGGGGAGCCTTTCTGCAGTCT
TGCACGGTGAGAATTTCACATCTCAGTGCCTTCACAG-TTTTATGTACTCATACTCTGATCATTATATTATTACTGTTCT
GCATATGTTATGCTAGTGCTTGCGAGTATCTTATTTTCGCATTTTTCATCCGTGGCAACGGTAGAGTGGTACTTCATTTT
CTCGTAAATGTTTGAGAAATGGATTGCAGTTGTCGAGGGGCGATTGTCTTGTACTACATCCATTCCTAAATATAAGATGT
TTTGGCTGTTCAAATTGAACCGACCGGATGTCTTATATTTAGAAACAGAGGGTGTAGCTATTACTACATCTGTCATGGCT
TGATTATCTCTAGTCTACGTGTGTCTTGTTGAAGGTGACACGTCAAGCTAATTTTGTTGCAGATCTTGTTTATTTGCTTG
ATATCCT--AAGTATTTGGATATTAAGTGTTCTTTATTGGGTATTATTATTAAAATCATATTCTGACTATTCTTAGTACT
ATTCCTTGTGGTCTGGGACTATGTTTGTGGCTAGAATACTTCTATTGCAGTCAACTGCTCCCTTTCAGGTTTGGGGTTAC
CAATCTGTTCCAATTTTTCAGAATGTTGAATAGAACTGTTGATTGCTTTTCATAGTCCCATATTCTTTCCTCAATTGTGG
TTAAGTCTGTTCTTTGTTTGTTTACTTTAGGTCTATTCTTTGTTTGTATATTTTTGTGTTGATTAGAGGAAACAAAATCT
TGGGAAGCTGTTGTAGTTGGTGGACCACCATTTTTTTCATTGATTATGTTTGTGTCTTCATTGTGTCACTTGACCATGTA
ATGGATGAACCTTGAACTCTAATCGCACACGATGGTGATCATTTTTTGTCATGCAGGGAGCACAGGTTCTGGTCGTACCC
CACTTGACTTGACGATAAGATCAAGCATTGCCCTGGCTGCAGCCCGTGGGATCGAGTACATCCACTCTACAAGCTCTTCG
ACTTCGCACGGCAATATCAAGTCATCCAATATCCTCCTGTCGAAGACGTATCAAGCACGTGTTTCAGACAATGGCCTTGC
CACCCTTGTTGGTTCATCATCATCTGGACCTTCTCGCGCCACTGGATACCGTGCTCCAGAGGTTACTGATCCCCGGAGGG
TGTCCCAGAAGGCTGATGTGTTCAGCTTTGGTGTTCTCTTGCTGGAGCTGCTCACTGGCAAGGCCCCCAGCCAGGCTGCT
CTTAACGACGAGGGCGTCGACCTGCCCAGGTGGGTGCAGTCCGTCGTGCGCTCTGAGTGGACTGCGGAGGTGTTTGACAT
GGAGCTCCTGAGGAACCAGAGCTCCGAAGAACAGATGATTCAGCTTCTACAACTTGCTATAGACTGCGTTGCCCAGGTCC
CAGACGCCCGTCCGACGATGTCCCATGTCGTCGTGCGGATCGAGGAGATCAAGATGTCAGGTGGAAGCACCGAAGAAACT
GATCAACAACAGCAGAGCGCCCTGAATCAGGGCGATGAGATGGTCGAGGGCCCCTCCTCGCCGTGATCTCTAATGGCCTG
AGAGAAAGGAGCCGGCTGCCT--GTCGCTGTAGCCCACATTCATTCCGTTCATAGACTTGACGAATG----CTATCTTCT
TCTTCGACGGCGGAGCCGGCTGTTTTTTCATCTCTTCCTTTTAGCGAACGTCGGATTTGTCGTCGTCGTCT-----GTCT
TGGTGTTGTTGACTGACTGTGGGTGATTGTGTGGTGGGTGATTGC---GTGGTGGTGTTTAGGGATGGAATGCATGC---
-CCGACTGTGCGATTGCTTAATTTGTCTAGCCATTGTTCTAGCTGATTAGGTTGGTTCTTTAGCTGTCCCCATGTAATTA
CTCAGCCCGATCAAATTGCCTGGAACTCGTTGGCGAAAACCATTTG----------------------------------
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------------------------------TCGTGAGTTTACCTGCCTGGTGTCCAGTTCTTGTTGTGGCTTTGT-----
------------GTGTGTGTGTGGGTGTGTGGGTCATGCATGTGCTTTGGATTGGCTCCAGTTGTTGTTGAAAGCTTCCG
CGTGGTGTGTCTGTCTCGATCCGGGTCGGGTGGCACGGCTTTCGGCTTTCGGCGGGGCGAGCGGGACTGTTTTGAACTGG
CAGGGACAGGGACAGGGACAGGGAGGGAAACTGAATTGAATTTCGCCTGATGCGCATAGCGACTTGCCTGCTCCTCATCA
TCGCTTCTCATTGTTGATTAACAGTTGGGAGGTACAGCCATGCTGGGATCC-ATCCATCGATCGAGAGAGCAAAACCAGA
GGTTCTGTACACGCTTGATGCTGATTATGATTCAAAGATATCTA--------TTGTGGTTGCTGTCTAGATGACCCAATC
TCGACATCTCGGTCGTAGCAGCCGGTACGATTTGTTGGCCCTGGTAGATGGCAAGCGCTCAACGAACAACCATCGTCCCT
GGTTGGTTCATC--GTGGACGCGACAGCGCTAGGGCCCTAGCAGCGT-GCGTGCGTACGTGTCTGTGCTGTGCACGGAAC
TGACCGATGTC----------------------------------------------------------
>chr4B_16
---------------CAA--------------------------------------------------------------
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----TCCAATCCAAGCGTCCGTTGTGACGACAGACCAACGCTCTAGCACCACCAGTCAACACGGAGAGGCCGCTCTGACC
TTTCCAGGCGACCTTTCATCGGCGGCGGCCGACCGGTGGGCTG----GACCGACCGCCGGAAACACCACAGGCAAACCGC
TGGAAGAGCAGTAAATAAATATTAACCATGCCGC------------------------------------AAATCAGGCA
GAGAGTGAAACTGACGCGCCTGCTCCAGCTCAGAAACAATCCCTGCCCGCCCC-------------CGCAGCGCACGCGG
AGCGGCACGCATTTGTTCGGCGCCGGCCCCGAGGCGGCCCGGTGTCGCGATCCCGTCGCCCCCCCAGTCCCGTCCCCGTC
AACCGGAATCTAGGAATCCCCCTCGCCGGGAGGGGAACCGAGCGAGCCAAACAGACGAGCCAACGCGCATTCCCACCCCC
GTCTCCGTCAGCGGGTGCGGCCGCCCACCGAACCCGAACCCCCGCGGAATAAAACCCGGCCGAGAGGC------------
CGTGCCGCCAGATCCGCACGGGAGTTTCTAGGGTTTTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCCGACCCA-----------CCCCATT
CCTCGCTCGCTGTTCAGCAGCCCACCCCCCAAACCGGAACAGCCACACCACACCGCCAGCGCCCATTC------------
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------------------------------CCCCGCCCCGCCCCACCCCCACCGCCGCGATGCGGTCGCGGCGGCCACCG
CCGGCGGCGACCCGCGCCGTGCTCTTCCTCCTCGCGCTCCTCGCGGCGTGGGGCGCGGCGACGGCCGACCTCGCGTCGGA
CGCGCGGGCGCTCGTCGCCTTCCGGGCCGCGGTGGGCCAGCGCGTGGCCTGGAACGTGGCCGACCCCACCACCGTCTGCG
CCTGGACGGGGGTCACCTGCGAGGGCGGCCGCGTGGCGGCGCTGCGCCTCCCGGGGGCCGCGCTGGCGGGGCCCGTCCCG
GCGGGCTCGCTCGGGAACCTCACCGCGCTGCACACGCTCAGCCTCCGCCTCAACGCGCTCCGCGGGGCCCTCCCGTCCGA
CCTCGCCTCCATGGCCGCGCTCCGCAGCGTCTTCCTCAACGGCAACCGCCTCTCCGGCGACTTCCCGGCGCCGTTCCTCG
CGCTCCCCGCCCTCGTCCACCTCTCCCTCGGCGGGAACCGCCTCGAGGGCGCCATCCCGCCGGCCCTCGCCAACCTCACC
CGACTCAAGACGCTGCTCCTCGAGGAGAACCGCTTCGTCGGCCAGATTCCCGACCTCCCGCTGCCGCAGCTGCGGGAGTT
CAACGTCTCCTTCAACCGGCTCAACGGATCCATCCCCGCCTCGCTCCGCTCCAAGCCGCGCGCGGCCTTCCTCGGGATGT
CGTCCCTCTGCGGCGGGCCCCTGGGCCCTTGCCCTGGCGAGGCCCCTCCCCCTTC---TCCGGCTCCGGCGGGCAGGACG
CCCTCGCCGACAACACCTGCGGCAAACAACCCGAACAGCGGAAACGACGAACGAAATGACAAGAAGGGCAACAAGCTCTC
CGGCGGCGCCATTGCCGGAATCGCCATAGCCTCCGTCGTCGGCGCCGCGCTTCTCCTGTTCCTTCTCATCTGCCTCTGCC
GCAGGTCGGGGCGCACCAAGACACGGGCTCTGGAGATGCCGCCTCCGTCTCCATCCCCCGCCGTCATCCCCGGCGGCCGA
AAACCCCCGGAGTTGCCCAGCGGCGCGGCCGTGGCGCCTATGGCTACCGTGGGCCACCCCGCGGGCCAG---TCGACTTC
AGGGAAGAAGCTGGTCTTCTTCGGGTCAGCGGCCGCCGTCCAACCGTTCGACTTGGAGGACCTGCTGCGCGCGTCGGCCG
AGGTCCTTGGCAAAGGTGCCATCGGGACGACCTACAAGGCTGTGCTTGAATCCAGCGCTACCGTGGCGGTGAAGCGGCTC
AAGGATGTCACCATGTCTGAGCCAGAGTTCCGTGAGCGCATTGCGGACATTGGCGAGCTTCAGCACGAGTTCATCGTGCC
TCTCCGTGCTTACTACTACAGCAAAGATGAGAAGCTGCTTGTGTACGACTTCATGCCCATGGGGAGCCTTTCTGCAGTCT
TGCACGGTGAGAATTCCACATCTCAGTGCCTTTACAG-TTTTCTGTACTCATACTCTGAT--------------------
--ATATGCTGTGCTCGTGCTTGTGAGTATCTTATTTTCGCATTTTACGTCCGTGGCGATGGTAGAGTGGTACTTGATTTT
CTCGTAAATGTGTGAGAATTGGATTGCAGTTGTTGAGGGGCGATTGTCTTGTACTATATCCATTCCTAAATATAAGACGT
TTCGGCAGTTTAAATTGAACCAACCGGACATCTTATATTTAGAAACAGAGAGTATAGCTATTACTACATCTGTCATGGCT
TGATTATCTCTAGTTTACGTGTGTCTTGTCGAAGGTGACACGTCAAGCAAATTTTGATGCAGATCTTGTTTATTTGCTTG
ATATCCACAAAGTATTTGGATTTTAAGTGTTCTTTATTGGGTATTATTATTAAAATCATATTCTGACTATTCTGGCTGCT
ATTCCTTGTGGTCTGATACTATGTTTATGGCCAGCATACTTGTATTGCAGTGAACTGCTCCCTTTCAGGTTTGGGGTTAC
CCATCTGCTCCAATTTTTCAGAATGTTGAATAGAACTGTTGATTGCTTTTTATAGTCCCATATTCTTTCCTCAATTGTGG
TTAAGTCTATTCTTTGTTTGTTTACTTTATGTCCA--------TTGTATAC-TTTGTGTTGATTAGAGGAAACAAAATGT
CGGGAATCTGTTGTAGTTGGTGGAGCGGTAGTTTTTTCATTGATTGTGCTTGTATCTTCATTGTGTCACATGACCATGTA
ACGGATGAACCTTGAACTCTAATCTCACACGATGGTGATCATTTTTTGTCACGCAGGGAACAGAGGTTCTGGTCGCACCC
CACTTGACTGGACGATAAGATCAAGCATTGCCCTTGCTGCAGCCCGTGGGATCGAGTACATCCACTCTACAAGCTCTTCG
ACTTCGCACGGCAATATCAAGTCCTCCAATATCCTCCTGTCGAAGACGTATCAAGCACGTGTTTCAGACAATGGCCTTGC
CACCCTTGTTGGTTCATCATCATCTGGACCTTCTCGCGCCACTGGATACCGTGCTCCAGAGGTTACCGATCCCAGGAGGG
TGTCCCAGAAGGCTGATGTGTTCAGCTTTGGTGTTCTCTTGCTCGAGCTGCTCACCGGCAAGGCCCCCAGCCAGGCAGCT
CTTAACGACGAGGGCGTCGACCTGCCCAGGTGGGTGCAGTCCGTCGTGCGCTCTGAGTGGACCGCGGAGGTGTTTGACAT
GGAGCTGCTGAGGAACCAGAGCTCCGAAGAACAGATGATTCAGCTCCTACAGCTCGCTATAGACTGCGTTGCCCAGGTCC
CAGACGCCCGTCCGACCATGTCCCATGTCGTCATGCGGATCGAGGAGATCAAGATGTCAGGTGGAAGCGCCGAAGAAGCT
GATCAACAACAG---AGCGCCCTGAACCAGGGCGATGAGATGGCCGAGGGCCCCTCCTCGCCGTGATCTCAAATGGCCCA
AGAGAAAGGAGCCGGCTGTGCTCGTCGCTGCAGCCCACATTCATTCCGTTCATAGACCTGACGAATGCTGTCTATCTTCT
TCTTCGACGGCGGAGCCGGCTGTTTTCTCATCTCTTCCTTTTAGCGAACATCGGATTCGTTGTCGTCGTCGTCGTCGTCT
TGGTGTTGTTGACTGACTGTGTCTG-TTGTGTGGTGGGTGATTGCGTGGTGGTGGTGTTTAGGGATGGAATGCATGCATG
CCCGACTGTGCGATTGCTTGATTCGTCTAGCTATTGTTCTAGCTGATTAGGTTGGTTCTTTAGCTGTCCCCATGTAATTA
CTCAGCCCGATCAAATTGCCCGGAACTCGTTGGCCAAAACC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------ATTGGTGAGTTTACCTGCCTGGTGTCTGTCCTGTGGATCCAGTTGTTGCCGA
TGGGCATGTCCAGTTTGGC--TGTGTGTGTGGGTCATGCATGGTGCCCTGGATGGCTCCATTTGTTGTTGAAAGCTACTG
CGTGGTGTGTCCGTCTCGAGCCGGGTCGGGTGGCACGGCTTTCGGCTTTCGGCGGGGCGAGTGAGACTGTTTT-------
----------------GACAGGGAGGGAAACTGAATTGAATTTCGCCTGATGAGCGTAGCGACTTGCCTGCTCCTCATCA
TTGCTTCTCATTGTTGATTAACAGTTGGGAGGTACATCCATGTTGGGATGGGATCCATCGATCGAGAGAGCAAAACCAGT
GGTTCTGTACACGCTTGATGATGATTATGATTCAAAGATATCTA--------GTGTAGTTGCTGTCTAGATGACCCAA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>chr4A_4065
--------------------------------------------------------------------------------
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---------------------------------------------------GTGCTGTTTAGGGATGGAATGCATGC---
-CCAACTGTGCGATTGCTTAATTTGTCTAGCCATTATTCTAGCTGATTAGGTTGGTTCTTTAGCTGTCCCCATGTAATTA
CTCAGCCCGATCAAATTGCCTGGAACTCGTTGGCGAAAACCATTAGTAATTAGATAAGTGAACTTTTGCATCTTATTTTT
CACACAAAAACCCTCTTTTGGCACTTGAAAAATGAAAATTTATTTTTTTATTACAAAAAGTTAGAACCTCCCATGTGCAA
TCTTGTTTGGCATGCTAAGCACCATGTTTGTGCCAACTATCATCACATTATATAAAATTGACATGGATATAGCCATGAAC
TTGGTCATTTGGCTTGAAAGCCATGAACCTTCATATTTTTTAGGAGAGATGCCTCCCAAACAGACACATCTCCGTCCCAT
TCACATATCTTGTTCTAGAAAAACTATTTTGAGAACCATGAAACTAACATGCAATGTATTCTGAAATGTTAGGAATATAG
TATAATGCCAAACTAAACTGCGACAACCATTGGTGATTTTATCTTCTTGGTGTCCTCGTTG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCGCTAGGACCCTAGCATAGCAGCGTGCATACGTGTCTGTGCTGTGCACGGAAC
TGACTGATGTCAGGGCGGGTTTCACTATGTTTCAATGGTTCTGGTAGGCCGAGCCACCTGCAATTTT--
>SNPs
SSSSSSS-SSSSSS------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------S---------------------------------
---S----------------S--------------------S---S---S-------------SS-S-------------
-----------------SSS-SS--SS--S-SSSSSSS---SSSSS--S---S-SS-SSSSSSSSSSS----------S-
--S-----------------------------------------S--S----SSSSSSSSSSSSSS--------------
---S--------------------S----------S-S----------S-------------------------------
-----------S-------------------S-------------S----------------------------------
---------------S-------------S--------------------------------------SSSSSSSSSSSS
------------------------------------------------SSSSS---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------S---------
-----------------------------------SS-------------------------------------------
---------S----------------------------------------------------------------------
------------------------S---------------------------------------------S---------
--------S-----------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S--------------------------------SSS----------------------
------------------S-----------------------------S---S--S------------------------
------------------------------------------------------------------------------S-
----------------------------------------------S---------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
----------------------S----S---------S------------------------------------------
------------------------S--------------------------S----------------------------
------------------------------------------------------------------S-------------
---------------------------------------------------------------S----------------
-----------------S-----------------S--------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
------------S----S--------------------------------------------------------------
-------------------------------------------------------------------S------------
---------------------S----------------------------------------------------------
--S----------------------------S--S---------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
---------------------S-------------------S--------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
S-----------------S-------------------------------------------S--------------S--
-------------------------S----------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------S-----
--------S------------------------------S------------------------S---------------
----S------------------------------------S--------------------------------------
-----S-S------------------------------------------------------------------------
---S--------------------------------------------------------S-------------------
---------------S---------------------S----SSSSSSSSSS-------------S-S-----S----S-
S-SSS------SSSSSSSSSSSS-SSS------------------------------------------S----S-----
--SSSS--SS-SSS---S------------------------S-------------------------------------
-----------S---------------S-------------------S-S-S-------S-------SS
>forward_2077
--------------------------------------------------------------------------------
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---------------------------------------------------------GGAATAAAACCCGGCCGAGA---
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>reverse_4155
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--------------------------------------------------------------------------TGTGCC
TCTCCGTGCTTACT------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_2131
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-------------------------------GGTTTTTCCCTCCCTCCCTC-----------------------------
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>reverse_4372
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---------------------------------------------------ATGGCGATGGTAGAGTGGTAC--------
--------------------------------------------------------------------------------
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>forward_2132
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--------------------------------GTTTTTCCCTCCCTCCCTCC----------------------------
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>reverse_4544
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---------------------------------------------------------------TTACATCTGTCATGGCT
TGATTATCT-----------------------------------------------------------------------
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>forward_2133
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---------------------------------TTTTTCCCTCCCTCCCTCCC---------------------------
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>reverse_4578
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-----------------GGTGTGTCTTGTCGAAGGCG-------------------------------------------
--------------------------------------------------------------------------------
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>forward_4345
--------------------------------------------------------------------------------
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-----TGTTGTGCTCGTGCTTGTGT-------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_6645
--------------------------------------------------------------------------------
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----CTGTGTCTGTCTCGATCCGG--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
