>input_sequence_26867
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------------------------------------------ATGCTAACACATCGCCCCCACGGCAACTTCCAAACACG
AGCACACCGCGGCGGCGGCTGCCGCCGTGGCACCCGGATTTCACGGGCCCGTATCGGCTGCCGGAGACCGAGTACCATCC
TTCTGAGCTTCAGCCACCGGCGCACCGACGGCCGACGAGCGAGGATGCATCTGACTCCGCGAGCACGAAAAAGATCAAGT
CCAGGGCACCG-----GGAGTCAGATCCTGAGATGTCTTCACAGGGGGACCCGGGCTCAGGCTCAGGCTCAGGCTCAGAC
TCGTCGGCGCACAGCTCCCCGGCGCGTGAGCCGGAGATGCCGCTCGTACCAATCTGGAGGAACTCCAAGGGGAAGTTGGT
CTACGGCTTCACTGACGACAAGGCCGCCGTGGCCAAATATCACCAGGATTTACAAAAGTATGAGCAGAAGCTAGGTATCC
TATTTTAACTGCTGCCTTCCATCCTTTTGATCCTTTC--TAAATTAAACGATTCCAGCATTCAACATTAT----------
------------------------GATGAATTGTGTTGTTTTGCAGCTCGACAAGAAGAATTGCTGACGCTCAAGCTGCC
TTCCAAGGCCCCTGGTACCAACGAACGCTACGGCAGCCCCAAGAACAAGGACATAATTTTAAACGCCGCCAAATCAATCC
TGAGTCTTTCAGCCTATCTTGGTAATTTTGTTATCT--TATATCTCTGTCACTCTATTGGATAGAAGTTGCTTGTTAACT
ATGGTCAGCGTATGTACAGATGGCAAAGAGATTAACCGGTGCACAGGCATTGTTGTCAATCGAGATGAAGATACGAAATC
TCTTACCATTCTCACCTCTGCCTGGCTTATCTGCACAGAGAAACCATCTAATGATTGGCTGGATAAAGAATATGCTCCTC
AAGCTAAGGTAAAAGTGATGTTCAACTATCATGTTAGCTAGCTATACAAATATTTTATTTTTATTTTATTTGGATA--TG
AATGGGGACAATAAATGTACTTCTCTTTGAATCTTATAACTTATAAGTATCTTTCTTCGATGTTGTA---TTTACATTCA
GCCCTCTTGCATTCACGGTATAACTTATATTACCC-TTTTTTTGTCTCCCTTTGATGTTTGTGTGTACATTTAGTTGTTG
CTTTATCGTGTGACCAATATTACATTCTTCTTTGTTACTTAAATGGCAAGTGTTAGACG-TTATAGTTTACTGCAATATG
TGCAATATTTTTTCTGCTTCTAATCGACTGTTTCATTTTAGGTTATTGTTCACCTATTGGATGGCACAACCGTCGATAGT
CAACTGATGTACTTTAGCAAACATTATGACATCGCCTTCTGTGAGATTACGGGAGGTTTACACTTGCAGAGTTTACCATT
GGAAGGTAACTCGGAGTTCAGCAATGAAACACTTGTGTTAGTTGCTAGGGATGCAAATCTAGATTTAATCTACAAAGAAG
CCAAGCTGGCATCTGTAGGCCCTTGTGAATTCCAACACAATCATTATAAGTTCATCACCTGTTCAATTCCTAACAAGGTA
ATTATATTTGTTCTTTTGTATTATTCT-TACCTAATCC-AAGTTAACAAATAAGTGTGCCTCTAAATGTAGTGTGGAACT
GGAGGTGGACTGTTGGATTTTAATGGGAAAATTGTAGGGTTAGTATCCTACACATTTCCTCTTGTTGCGTTTATTCCAAG
CTATCTTATAACGAAGTGTTCAACATTGTTGAGAAAATTTGGGTAAGA--TTTTTTACTTTATTAAGTTTCAGTGCTGAA
ACGATTCGTTATATGATGCTTTCTCTGGATGTCAATAATGCTATCTTCTAATGTGGCACGCGCTTATGTTGATGCATCGC
CTCGATCGTCAACTGATGCATACAAACCAAACAGCTCAACTAGGACTAGGACTCTGCTTTGGGTAAGCTAGAACGATCAG
AAGAAAGTGTCAGTGATGCTTTCTTTATATCATGCTTTCTTTGGATTACATCAGAAGAGAGCATGTCACACTTATGTCTT
CACTGATTAGAAGATAGCATTACTCTGCTTTGACAT--------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AACTAAAAGAGCATTACATCCCCTTGATCATCAACGGA
TGCATACAAATCGAACAGACTACGACTTGTCCTACTCAACTCGGACTAGGACTCTGCTTTGACCTTTACAGAGCCGACTC
ATGTCCTTATTTCTTTAATCAAGCTAGACTGTTGTGCGCATAGTAAGCCATGATGTGAATGCTTGGAGCTTCAAAGGTAG
TAGCGGTGCGATACGGGAGGACGAGTTCATCCTCTGCATCCAGGTGTCGTGATTAGCAAGTTGAGAGAGATAACAGGGGA
TAGGTTAGAGAAATTAGAGGGATAGGGATTAGCGACAGGAAGATGGAGGGTTTATTTCTGCTTGGCCCAAAAGACACGAA
ATGCATACCCTCTTATATGAGAACCAGCACTTGATGCATACAAACCGAATAGACTAGAATGTAGTACTCAACTTGGGACC
CTGCTTGGTGGGCAAGTACCTTTTTTTTTGCCAGGTTTGGTGGGCAAGTACCTGCGACAACGCCACTCCAAACCGCCAAG
CCAAGGCGTCCCTCACCATGCTTGTTTCGTGGACTGTCCGGAACGAGCGAAACGCAAGGGTCTTCAAGCACAGGAGCGCT
CCTCCAACTATATTGCTTGCCTCCATCGAGACCGAGGCCAACCTTTGGGTCATCGCAGGTGCCAAAAAATTAGGGTTCAT
TATTTTGCGAGAGTGATCTCATGCCGTGTATTGAATGACTTGTAACAAACTCTATTCTCTCTTATTTAATGGATAAGGCA
AAGCTTTTGTCTCCGTTTCCAAAAAAAACTCGGGACCCTGTTTTGACTCTAG-------------TCACGTCCCTGTTTG
TTTAATCAGGCTAGACTGA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr5A_1_TraesCS5A01G049500
GACTAGGATTTCTGTTAGAGCTAAGTTGATCCAGGCAGGAAAAAACCCTTAAACTTATGACGTCAATCCCCGGCGAACGT
TCGTTGCCAAACATGGCAGTTATGAATGCCGCGGTTGGTAGGTTTAGCTTAG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AGGGTTGGCATT-----------AAAAAAAAGCCTGGCAGCTTTTCAATTTTAGCACAAGTCTCCAACAGAA
ACTGCCATCCATTAGATCTGGATCAGACGGCTCTGGAGACGTTCGCTGGGAACCCACCCC-AGCGAACGATTCACCAGAT
ATCTATCTATATATTGTATATAAAT-----AAACTTTAAACCACTAGTACATGGTACGTGCAAAGCACGTAGAAAAGATA
CTATTATGAATTTTGTCAAAATTATTTGTGCAACAGATCGGCTTATAATCTCATGATTATTAGATGCTTCTTACTAACAC
GATCACATAATATTATGCTTTGATAATTATACTGCACTATCTGCATCTATACCATAATGGAATACCACCCTATCCGGTGT
GTCTTGTCTTTCTAGAACTCTCCTGACAGTCCTATTCTTCCCACCCTATCCGGTGTGTTCTCTAGTCCTCTAGTACCCTC
TCCGTATGCGCCAGTACGTGCTGGTCCTGGGGAGCAGTCCAGTAGACTGGGAACACAGGGTACTGTAGATTTAGTGTAGC
TGCGAATCCCCGCAACTTCAGCCGTCCGATGGAGTCTAATCAACGGCCAGCATGCAGCAGCTCACAGATTTGCTACTTGT
CCACCGTCCGATGCATTATATCTAACGGCTAATACTTAAACTTATTCGTGTATTATATAGGAGTATAGATAAATAATCAG
TTTCCTCCATATGAAAGGCCATGTATTCAGACCCCTT-----------CCGGCCTCCTCTTGCAAGGTTCCTGCGTGGCT
GCGACGTCGTTCGCTCCGGCCGGTGCTGCTTCCGGAGCCGTTCTGATGATTTTCGAACCGACCGGCGGTGATGTCGGGGT
CAGGGTCCAATCCAGTTCT------------------CGAGGATGCTAACACATCGCCCCCACGGCAACTTCCAAACACG
AGCACACCGCGGCGGCGGCTGCCGCCGTGGCACCCGGATTTCACGGGCCCGTATCGGCTGCCGGAGACCGAGTACCATCC
TTCTGAGCTTCAGCCACCGGCGCACCGACGGCCGACGAGCGAGGATGCATCTGACTCCGCGAGCACGAAAAAGATCAAGT
CCAGGGCACCG-----GGAGTCAGATCCTGAGATGTCTTCACAGGGGGACCCGGGCTCAGGCTCAGGCTCAGGCTCAGAC
TCGTCGGCGCACAGCTCCCCGGCGCGTGAGCCGGAGATGCCGCTCGTACCAATCTGGAGGAACTCCAAGGGGAAGTTGGT
CTACGGCTTCACTGACGACAAGGCCGCCGTGGCCAAATATCACCAGGATTTACAAAAGTATGAGCAGAAGCTAGGTATCC
TATTTTAACTGCTGCCTTCCATCCTTTTGATCCTTTC--TAAATTAAACGATTCCAGCATTCAACATTAT----------
------------------------GATGAATTGTGTTGTTTTGCAGCTCGACAAGAAGAATTGCTGACGCTCAAGCTGCC
TTCCAAGGCCCCTGGTACCAACGAACGCTACGGCAGCCCCAAGAACAAGGACATAATTTTAAACGCCGCCAAATCAATCC
TGAGTCTTTCAGCCTATCTTGGTAATTTTGTTATCT--TATATCTCTGTCACTCTATTGGATAGAAGTTGCTTGTTAACT
ATGGTCAGCGTATGTACAGATGGCAAAGAGATTAACCGGTGCACAGGCATTGTTGTCAATCGAGATGAAGATACGAAATC
TCTTACCATTCTCACCTCTGCCTGGCTTATCTGCACAGAGAAACCATCTAATGATTGGCTGGATAAAGAATATGCTCCTC
AAGCTAAGGTAAAAGTGATGTTCAACTATCATGTTAGCTAGCTATACAAATATTTTATTTTTATTTTATTTGGATA--TG
AATGGGGACAATAAATGTACTTCTCTTTGAATCTTATAACTTATAAGTATCTTTCTTCGATGTTGTA---TTTACATTCA
GCCCTCTTGCATTCACGGTATAACTTATATTACCC-TTTTTTTGTCTCCCTTTGATGTTTGTGTGTACATTTAGTTGTTG
CTTTATCGTGTGACCAATATTACATTCTTCTTTGTTACTTAAATGGCAAGTGTTAGACG-TTATAGTTTACTGCAATATG
TGCAATATTTTTTCTGCTTCTAATCGACTGTTTCATTTTAGGTTATTGTTCACCTATTGGATGGCACAACCGTCGATAGT
CAACTGATGTACTTTAGCAAACATTATGACATCGCCTTCTGTGAGATTACGGGAGGTTTACACTTGCAGAGTTTACCATT
GGAAGGTAACTCGGAGTTCAGCAATGAAACACTTGTGTTAGTTGCTAGGGATGCAAATCTAGATTTAATCTACAAAGAAG
CCAAGCTGGCATCTGTAGGCCCTTGTGAATTCCAACACAATCATTATAAGTTCATCACCTGTTCAATTCCTAACAAGGTA
ATTATATTTGTTCTTTTGTATTATTCT-TACCTAATCC-AAGTTAACAAATAAGTGTGCCTCTAAATGTAGTGTGGAACT
GGAGGTGGACTGTTGGATTTTAATGGGAAAATTGTAGGGTTAGTATCCTACACATTTCCTCTTGTTGCGTTTATTCCAAG
CTATCTTATAACGAAGTGTTCAACATTGTTGAGAAAATTTGGGTAAGA--TTTTTTACTTTATTAAGTTTCAGTGCTGAA
ACGATTCGTTATATGATGCTTTCTCTGGATGTCAATAATGCTATCTTCTAATGTGGCACGCGCTTATGTTGATGCATCGC
CTCGATCGTCAACTGATGCATACAAACCAAACAGCTCAACTAGGACTAGGACTCTGCTTTGGGTAAGCTAGAACGATCAG
AAGAAAGTGTCAGTGATGCTTTCTTTATATCATGCTTTCTTTGGATTACATCAGAAGAGAGCATGTCACACTTATGTCTT
CACTGATTAGAAGATAGCATTACTCTGCTTTGACAT--------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------AACTAAAAGAGCATTACATCCCCTTGATCATCAACGGA
TGCATACAAATCGAACAGACTACGACTTGTCCTACTCAACTCGGACTAGGACTCTGCTTTGACCTTTACAGAGCCGACTC
ATGTCCTTATTTCTTTAATCAAGCTAGACTGTTGTGCGCATAGTAAGCCATGATGTGAATGCTTGGAGCTTCAAAGGTAG
TAGCGGTGCGATACGGGAGGACGAGTTCATCCTCTGCATCCAGGTGTCGTGATTAGCAAGTTGAGAGAGATAACAGGGGA
TAGGTTAGAGAAATTAGAGGGATAGGGATTAGCGACAGGAAGATGGAGGGTTTATTTCTGCTTGGCCCAAAAGACACGAA
ATGCATACCCTCTTATATGAGAACCAGCACTTGATGCATACAAACCGAATAGACTAGAATGTAGTACTCAACTTGGGACC
CTGCTTGGTGGGCAAGTACCTTTTTTTTTGCCAGGTTTGGTGGGCAAGTACCTGCGACAACGCCACTCCAAACCGCCAAG
CCAAGGCGTCCCTCACCATGCTTGTTTCGTGGACTGTCCGGAACGAGCGAAACGCAAGGGTCTTCAAGCACAGGAGCGCT
CCTCCAACTATATTGCTTGCCTCCATCGAGACCGAGGCCAACCTTTGGGTCATCGCAGGTGCCAAAAAATTAGGGTTCAT
TATTTTGCGAGAGTGATCTCATGCCGTGTATTGAATGACTTGTAACAAACTCTATTCTCTCTTATTTAATGGATAAGGCA
AAGCTTTTGTCTCCGTTTCCAAAAAAAACTCGGGACCCTGTTTTGACTCTAG-------------TCACGTCCCTGTTTG
TTTAATCAGGCTAGACTGATGTAGTAACCGTATGGGCTCTACTAACGCCACAACACCGGCCTATGGACCGGCCCTGACCA
ATGATGGAGAAATTTTGAAAGAGGCAAGGCGAGGTGAGACGGTAAGGGTAGTTGCACAACTTTAATATGGCATAGAGAAG
CGGTGTGACACTAAATATGTTGGTTTGTGCCGATTCAACCTTATGCTAACAACGTGGTTTCATATTTTGATAAACATTTG
GTTCAAATTACAACTATGGTAGAAATATATGGTCCTGAATGCTTAGAGCTTCAAAGGTAGTAGCGGTGCGATACGGGAGG
ACGAGTTCATCCTCTGCATCCAGGTGTCCTGATTGGCAAGTTGAGAGAGACAACGGGGGATAGGTTAGAGAAGTTAGAGG
GATAGGGATTAGCGATAGGAAGATGGAGGGTTTATTTCTGCTTGGCCCAAAAGACACAAAATGCATACCCTCTTATATGA
GAACCAGCACCTGATGCATATAAACCGAATAGACTAGAATGCACTCCCTCCATTTCCAAATATAAGCCCTTCTAGAGATT
TTAATATGGATTACATACAGAGCAAAATGAGCGTATGTAGTTCATATTAAAATCTCTAAAAGGGCTTATATTTAGAAACG
GAGGTAGTAGTACTCAACTCGGGACCCTGCTTTGACTCTTACTCAGTCACGTACTCACATTCCTGTTTGTTTAATCCGGC
TAGACTGATGTAGTAACCAAATGGGTTCTACTAATGCCACAACACCGGCCTGAAAGAGGCAAGGCGAGGCGAGATGGTAA
GGGTAGTTGCACAACTTTAATCTGGCATAGAGGTGCGGGGTGACACTAAAGCTGTTGGTTTGTGCCGATTCAACCTTATA
CTAACAACGTGGTTTCATATTTCGGAAAACATTTGGTTCAAATTACAACAATGGTAGAAATGTATGGTCCTGAATGCAAT
ATACCCTGTTTCAAGTAC-ATTTGTTGATTTAGTGACGATTGTTTGGCAGGAAAATTGTG--------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr5B_12
-----------CTGTTAAAACTAAGTTGATTCAATCAGGAAAAAAACCATAAACTTATGACGTCAATCCCCGGCGAATGT
TCGTTGCCAAACATGGCAGTTGTGAATGCCGCGGTTGGTAGGTTTAGTTTAGTGTCAGCATCCCTGCTACCATGGGCCGG
CTATGGGCTAGGCCCAGCTACCTTGCCGTCGGAGGAGCAGCTACAGCCGCAACTACTACAAATAGCAGGACCCAAGCGCT
GGACGAGGTATCCGCGTAGGATCACGAACCCGGCGGCGGCGGCTCTCTGTTCTTCTTCTACCTCAGTTCCCCTTCCTCTT
CCGTTTCTCTTGTAATCACCGCTAAGACAAGAATCCTTGTGTGAGTGCTATAGATCGTGTGATACATATATCTGGTACCT
AACATTTAGGGGTTGACATTTAA----AAAAAAAAAGAAACCTGGCAGCTTTTCAATTTTAGCTCAAGTTTCCAACAGAA
ACTGCCATCCATTAGATCTGGATCAGACGGCTCTGGAGACGTTCGCTGGGATCCCACCCCCAGCGAACGATTCGCCCGAT
ATCTATACTGC--------ATAAAT-----AAACTTAATC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ATAAATAATCAA
TTTCCTCCATATGAA-GGCCGTGTATTCTGAGTTCTGACCCCTTCCGGCCGGCCTCCTCTTGCAAGGTTCCTGCGAGGCT
GCGACGTCGGTCGCTCCGGCCGGTGCTGCTTCCGGAGCCGTTCTGAT---TTTCGAACCGACCGGCGGAGATGTCAGGGT
CGGGGTCCAGTCCAGCCCTCGGGGGAGCAACCAGCGACGAGGATGCCAACACATCGCCCCCACTGCAACCTCCGAACCCG
AGCACGTCGCGGCGGCGGCTGCCGCCGTGGCACCCAGACTTCACGGGCCCGTACCGGCTGCCGGAGACCGAGTACCATCC
TTCAGAGCTTCAGCCACCGGCGCGCCGACGGCCGACGAGCGAGGGTGCATCTGACTCCGCGAGGACGAAGAGGAGCAAGT
CCGGGGCATCGGAATCGGAGTCAGATCGTGAGACGTCTTCACAGGAGGAGCCG------------GGCTCAGGCTCAGAC
TCCTCGGCGCACAGCTCCCCGGCCCGTGAGCCGGAGATGCCGCTCGTGCCAATCTGGAGGAACTCCAAGGGGAAGTTGGT
CTACGGCTTCACTGACGACAAGGCCGCTGTGGCCAAATATCGCCAGGATTTACGCAAGTATGAGGAGAAGCTAGGTATCC
TATTTTGATTCTTTATTA--------------------ATAAATTAAACGATTCCATCATTCAACGTTATTCACTCTTTT
CTATCTGAGGCATAACTGTA---TGATGAATTGAGTTG-TTTGCAGCTCAACAAGAACAATTACTGACGCTCAAGCTGCC
TTCCAAGGCCTCTGGTACCAACGAATGCTACGGCAGTCCCAAGAACAAGGACATGATTTTAAACGCTGCCAAATCTATCC
TGAGTCTTTCAGCCTATCTTGGTATTTTTATTATCTTATATGTCTCTGTCACTCTATTGCATAGAAGTTGCTTGTTAATT
ACGGTCAGCGTATTTACAGATGGCAAAGAGATTAACCGGTGCACAGGCATTGTTGTCAATCGAGATGAAGATAAGAAATC
TCTTACTATTCTCACCTCTGCCTGGCTTATCTGCACTGAGAAACCATCTAATGATTGGCTGGATAAAGAATATGCTCCTC
AAGCTAAGGTAAAAGTGATGTTCAACTACCATGTTAGCTATACA---AAATACTTCGTTTTTATTTTATTTGGAAATGTG
AATGGAGACAATATATGTACTTCTCACATGAAT------CTTATAAGTATCTTTCTTCGATGTTGTACTATTTACATTCA
GCCCTCTTGCATTCGCGGTATAACTTATATTACCCTTTTTTTGGTCTCTGTGTGATGTTTGTGTGTACATTTAGCTGTTG
CTTTATCATGTGGCCAATATAACATTCTACTTTG--ACTTAAATATCAAGTGTTGGACAATTATAATTTACTGCAATATG
TGCAATATTTTAGCTGTTTCTAATCGACTATCACATTTTAGGTTATTGTTCACCTACCGGATGGCACAACCGTAGATAGT
CAATTGATGTACTTTAGCAAACATTATGACGTCGCCTTCTATGAGATTACAGGAGATTTACACTTGCATAGTTTACCATT
GGAAGGTAACTCGGAGTTCGGCCGTGAAGCATTTGTGTTAGTAGCTAGGGATACAAATCTAGATTTAATCTACAGAGAAG
CCAAGCTGGCATCTGTAGGCCCTTGTGAATTCCAACACAATCATTATAAGTTCATCACTTGTTCAATTCCTAACAAGGTA
ATTATCTTTGTTCTTCTGTATTATTTTCTACCTAATCCTAAGTTATCAATTAAGTGAGCCTCTAAATGTAGTGTGGAACT
GGAGGTGGACTGTTGGATTCTAATGGGAAAATTGTAGGGTTATTATCCTACACATTTCCTCTTGTTGCTTTTATTCCAAG
CTCTCTTATAATGAAGTGTTCAGCATTGTTGAGAAAATTAGGGTAAGACTTTTTTTACTTTATTAATTTTCAGTGCTGAA
ACGATTCGTTATATGATGCTTTCTCTGGATGTTAGCAATGCTGTCTTTTAATGTGGCGCGCGCTTATGTTGATGCATCCC
CTCGATCGTCAACTGATGCATACAAATCAAACAGCTCAACTAGGACTAGGACTCTGCTTTGGGTAAACTAGGACGATCAG
AAGAAAGCGTCAGTGATGCTTTCTTTATATCATGCTTTCTTTGGATTACATCAGAAGAGAGCATGTCACACTTATGTCTT
CACTGATTAGAAGATAGCATTACTCTGCTTTG------------------------------------------------
-----------------------------------ACTAAACTTAAAGAGCATCACATCCCTTTGATCGTCAACTGATGC
ATACAATTCAGTTGATGTTTCATCATTACTCTGCTTTGACTAAACTAAAAGAGCATTACATCCCCTTGATCATCAACTGC
TGCATACAAATCGAAAAGACTACGACTTGTCCTACTCAACTAGGACTAGGACTCTGCTTTGACTTTTACAGAACCGACTC
ACGTCCTTATTTCTTTAATCAAGCTAGACTGTTGTGGGCATAGTAAGCCATGATGTGAATGCTTAGAGCTTCAAAGGTAG
TAGCGGTGCAATACGGGAGGACGAGTTCATCCTCTGCATACAGGTGTCGTGATTAGCAAGTTGAGAGAGATAACAGGGGA
TAGGTTAGAGAAATTAGAGGGATAGGGATTAACAATAGGAAGATGGGGGGTTTATTTCTGC-------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TTGGTTTGTGCCGATTCAACCTTATGCTAACAACGTGGCTTCATATTTTGGAGAACATTTG
GTTCGAATTACAACTATGT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------TAGAAATATATGGTCCTGAATGCAAT
ATACCCTGTTTTAAAGTATTTTTGTTGATTTAGTGATGATTGTTTGGCAGGAAAATTGTG--------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr5D_50
TAAACTT--------------------------------------------------TGACGTCAATTCCCGGCGAACGT
TCGTTGCCAAACATGGCAGTTTTGAATGCCGCGGTTGGTAGGTTTAGCTTAG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GGGGTTGGCATTTTCTTTTAAGAAAAAAGAAGCCTGGC-------------TAGCGCAAGTGTCCAACAGAA
ACTGCCATCCATTAGATCTGGATCAGACGGCTCTGGAGACGTCCGCTGGGATCCCAGCCCCAGCGAACGGTTCGCCAGAT
ATCCATATTGT--------ATAAATATATAAAACTTAATC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ATAAATAATCAA
TTTCCTCCATATGAA-GGCCATGTATTCAGACCTCTT-----------CCGGCCTCCTCTTGCAAGGTTCCTGCGAGGCG
GCGACGTCGTTCGCTCCGGCCGGTGCTGCTTCCGGAGCCGTTCTGAT---TTTCGAACCGACCGGCGGGGATGTCGGGGT
CTTGGTCCAATCCAGCCCTCGGGGGAGCAACCAGCGACGATGATGCCAACACATCGCCCCCACGGCGGCCTCCGAGCCCG
AGCACACCGCGGCGCCGGCTGCCGCCGTGGCACCCAGACTTCACGGGCCTGTATCGGCTGCCGGAGACAGAGTACCATCC
TTCAGAGCTTCAGCCACCGGGGCGCCGACGGCCGACGAGCGAGGATGCATCTGACTCCGCGAGGACGAAAAAGATCAAGT
CCAGGGCATCGGAATCGGAGTCAGATCCTGACATGTCTTCACAGGAGGAGCCGGGCTCAGGCTCAGGCTCAGGCTCAGAC
TCCTCGGCGCACAGCTCCCCGGCCCGTGAGCCGGAGATGCCGCTCGTACCAATCTGGAGGAACTCCAAGGGGAAGTTGGT
CTACGGCTTCTCTGACGACAAGGCCGCTGTGGCCAAATATCACCAGGATTTACGCAAGTATGAGGAGAAGCTAGGTATCC
TATTTTGATTGCCTTCCGT--TCCTTTTGATTCTTTATATAAATTGAACGATTCCAGCATTCAACGTTATTCACTTTTTT
CTATCTGAGGCATAACTGTAGGATGATGAATTGAGTTG-TTTGCAGCTCGACAAGAACAATTACTGACGCTCAAGCTGCC
TTCCAAGGCCCCTGGTACCAACGAACTCTACGGCTGCCCCAAGCACAAGGACATGATTTTAAACGCTGCCAAATCTATCC
TGAGTCTTTCAGCCTATCTTGGTATTTTTATTATAT--TATATCTCTGTAACTCTATTGGATAGAAGTTGCTTGTTAACT
GCGGTCAGCGTATGTACAGATGGAAAAGAGATTAACCGGTGCGCAGGCATTGTTGTCAATCGAGATGAAGATAGGAAATC
TCTTACTGTTCTCACCTCTGCCTGGATTATCTGCACTGAGAAACCATCTAATGATTGGCTCGATAAAGAATATGCTCCTC
AAGCTAAGGTAAAAGTGATGTTCAACTATCATGTTAGCTAGCTACACAAATATTTCCTTTTTATTTTATTTGGATA--TG
AATGGAGACAATAAATGT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr6D_310
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------ACTAGTACATTGTACGTGCAAAGCACGTAGAAAAGGTA
CTATTATGAATTTTGTCAAAATTATTTGTGCAACAGATTGGCTTATAATCTCATGATTATTAGATGCTTCTTACTAACAC
AATCACATAATATTATGCTTTGATAACTATACTACACTACCTGCATCTATACCATAACGGAATACCACCCTATCCGGTGT
GTCTTT--TTTCTAGAACTCTCCTGACAATCCTATTCTTCCCACCCTATCCGGCGTGTTCTCTAGTCCTCTAGTACACTC
TCCTTATGCGCCAGTACATGCTGGTCCTGGGGAGCAGTCCAGTAGACTGGGAACACAGGGTACTGTAGGTTTACTGTAGC
GGCGAATCCCCGCAACTTCAGCCGTCTGATGGACTCTAATCAACGGCCAGCATGCAGCAGCTCACAGATTTGCTACGTGT
CCACCATCCGATGCAGCATATCTAACGGCTAATACTCAAACTTATTCGTGTACTATATAGGAGTATAGA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr5D_2006
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------TTCTTCGATGTTGTA---TTTACATTCA
GCCCTCTTGCATTCGCGGTATAACTTATATTACCC--TTTTTTGTCTTTGTTTGATGTTTGTGTGTACATTTAGCTCTTG
CTTTATCATGTGACCAATATTACATTCTTCTTTGTTACTTAAATCTCAAGTATTGCACG-TTATAATTTACTGCAATATG
CGCAATATTTTTTCTGCTTCTAATCGACTATTTCATTTTAGGTTATTGTTCACCTATCCGATGGCACAACCGTCGATAGT
CAACTGATGTACTTTAGCAAACATTATGACATTGCCTTCTTTGAGATTACGGGAGGTTTACAGTTGCAGAGTTTACCATT
GGAAGGTAACTCGGAGTTCGGCCATGAAGCATTTGTGTTAGTTGGTAGGGATGCAAATCTAGATTTAATCTACAAAGAAG
CCAAGCTGGCATCTGTAGGCCCTTGTGAATTCCAACACAATCATTATAAGTTCATCACTTGTTCAATTCCTAACAAGGTA
ATTATATTTGTTCTTTTGTATTATTCT-TACCTAATCCTAAGTTATCAAATAAGTGTGCCTCTAAATGTAGTGTGGAACT
GGAGGTGGACTGTTGGATTTTAATGGGAAAATTGTAGGGTTATTATCCTACACATTCCCTCTTGTTGCTTTTATTCCAAG
CTCTCTTATAATGAAGTGTTCAGCATTGTTGAGTATATTTGGGTAAGA--TTTTTTACTTTATTAATTTTCAGTGCTGAA
ATGATTCGTTATATGATGCTTTCTCTGGATGTTAGTAATGCTATCTTCTAATGTGGCACGCGCTTATGTTGATGCATCTC
CTCGATCATCAACTGATGCATACAAATCAAACAGCTCAACTAGGACTA----------------------GGACGATCAG
AAGAGAGCGGCAGTGATGCTTTCTTTATATCATGCTTTCTTTGGATTACATCAGAAGAGAGCATGTCACACTTATGTCTT
CACTGATTAGAAGATAACATTACTCTGCTTTGACTAAACTAAAAGAGCGTTACATCCCCTCGATCGTCAAATGATGCATA
CAATTTAGTTGACGTTTCATCACTACTCTGCTTTGACTAAACTAAAAGAGCATTACATCCCCTCAATCGTCAACTGATGC
ATACAATTCAGTTGACGTTTCATCATTACTCTGCTTTGACTAAACTAAAAGAGCATTACATCCCCTTGATCGTCAACTGA
TGCATACAAATCGAACAGACTACGACTTGTCCTACTCAAGT---------------------------------------
--------------------------------------------------------------------------------
-----------------AGGATGAGTTCATCTTCTGCATGGAGGTGTCGTGATTAGCAAGTTGAGAGAGATAACAGGGGA
TAGGTTAGAGAAATTAGAGGGATAGGGATTAACGTTAGGAAGATGGAGGGTTTATTTCTGCTTGGCCCGAAAGACACGAA
ATGCATACCCTCTTATATGAGAACCAGCACCTGATGCATACAAACGGAATAGACTAAATGCACTCCTACTCT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------ACTCGGGACCCTGCTTTGACTCTTACTCAGTCACGTACTCACATCCCTGTTTG
TTTTATCCGGCTAGACTGATGTAGTAACCGAATGGGCTCTACTAATGCCACAACACCGGCCT------------------
----------------GAAAGAGGCAAGGCGAGGCGAGACAGTAAGGGTAGTTGCACAACTTTAATCTGGCATAGAGGTG
CGGGGTGACACTAAAGTTGTTGGTTTGTGCCGATTCAACCTTATGCTAACAACGTGGTTTCATATTTCGGAAAACATTTG
GATCAAATTACAACAATG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GTAGAAATATATGGTCCTGAATGCAAT
ATACCCTGTTTTTAAGTATATTTGTTGATTTAGTGACGATTTTTTGGCAGGAGAATTGTG--------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr5A_3194
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------TGAATGCTTGGAGCTTCAAAGGTAG
TAGCGGTGCGATACGGGAGGACGAGTTCATCCTCTGCATCCAGGTGTCGTGATTAGCAAGTTGAGAGAGATAACAGGGGA
TAGGTTAGAGAAATTAGAGGGATAGGGATTAGCGACAGGAAGATGGAGGGTTTATTTCTGCTTGGCCCAAAAGACACGAA
ATGCATACCCTCTTATATGAGAACCAGCACTTGATGCATACAAACCGAATAGACTAGAATGTAGTACTCAACTTGGGACC
CTGCTTGGTGGGCAAGTACCTTTTTTTTTGCCAGGTTTGGTGGGCAAGTACCTGCGACAACGCCACTCCAAACCGCCAAG
CCAAGGCGTCCCTCACCATGCTTGTTTCGTGGACTGTCCGGAACGAGCGAAACGCAAGGGTCTTCAAGCACAGGAGCGCT
CCTCCAACTATATTGCTTGCCTCCATCGAGACCGAGGCCAACCTTTGGGTCATCGCAGGTGCCAAAAAATTAGGGTTCAT
TATTTTGCGAGAGTGATCTCATGCCGTGTATTGAATGACTTGTAACAAACTCTATTCTCTCTTATTTAATGGATAAGGCA
AAGCTTTTGTCTCCGTTTCCAAAAAAAACTCGGGACCCTGTTTTGACTCTAG-------------TCACGTCCCTGTTTG
TTTAATCAGGCTAGACTGATGTAGTAACCGTATGGGCTCTACTAACGCCACAACACCGGCCTATGGACCGGCCCTGACCA
ATGATGGAGAAATTTTGAAAGAGGCAAGGCGAGGTGAGACGGTAAGGGTAGTTGCACAACTTTAATATGGCATAGAGAAG
CGGTGTGACACTAAATATGTTGGTTTGTGCCGATTCAACCTTATGCTAACAACGTGGTTTCATATTTTGATAAACATTTG
GTTCAAATTACAACTATG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GTAGAAATATATGGTCCTGAATGCTTA
GAGCTTCAAAGGTAGTAGCGGTGCGATACGGGAGGACGAGTTCATCCTCTGCATCCAGGTGTCCTGATTGGCAAGTTGAG
AGAGACAACGGGGGATAGGTTAGAGAAGTTAGAGGGATAGGGATTAGCGATAGGAAGATGGAGGGTTTATTTCTGCTTGG
CCCAAAAGACACAAAATGCATACCCTCTTATATGAGAACCAGCACCTGATGCATATAAACCGAATAGACTAGAATG
>SNPs
S-SSSSSSSSS------S-S----------S--SS----------S--S-------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S---------------------------S--------------------------S-----S----------
---------------------------------------------------S---------------------S------
------S-SSSSSSSSSSS-----------------S-SSSS----------S------------------------S--
--------------------------------------S-----------------------------------------
S-------------------------S------S-----S-----------------S----------------------
-----SSS--------------------S------------------------S----------------------S---
---S-------------S--------------------------------------------------S----S------
S-------------------------S------S------------------------------------------S---
-----S---------SS-------------------S---------------S--------------------------S
---------------S-----------------S-----------------------------------------S----
-----------------------------------------------SSS------------------S-----------
-S-------------SS-----------------------------S----------------------S---S---S--
-----------------------------------S--S-----------------------------------------
---S-------------------S---------------------------------------S----------------
--------S------------------------------------S---S------------------------------
--S--------------------S--------------------------------------------------------
---------------------------S-------------------------SS---------S---------------
------S-S----SS--SSSS----------S----S----------------------------S--------------
---------------------------------S----S------------------S----S-----------------
------------------------------------------------------S-----------S--------S----
------------------------S----S--------------------------------------------------
-S-----------------------------------------------------------------------S------
------S-----------------------------S-------------------------------------------
--------------------------------------------S----------SS-----------------------
-----S-------------------SSSSS-SSSSSSSS-----------------------------------------
--------------S---------------------------------SS------------------------S-----
-------S------------------------------------SS--------S----------S--------------
-----------------------------S---------------------------S----------------------
----------------------------------------S---------------------------------------
-------------------S--S-----S--S------------------------------------------------
----------------------------------------------------------S---------------------
---------------------------------------------S----------------------------------
------------------------------------------S-------------------------S-----------
--S--------S----------S-------------------------------------------S-------------
--------------------------------S-S-------------------------------------------S-
--------------------------S---------------------------------------S----S--------
-------S------------------------------------------------------------------------
----------------------------------SS--------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-----------------------------------------S---------------------S--------S-------
-S----------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S------------------
-----------S-----S--------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_854
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TTCTTCCCACCCTATCCGGT--------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_1767
--------------------------------------------------------------------------------
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------AACTGCTGCCTTCCATCCTT------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>forward_1297
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------GGT
CAGGGTCCAATCCAGTT---------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_2167
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------CATTCTCACCTCTGCCTGGC------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>forward_1570
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------GAGATGTCTTCACAGGGGGAC------------------------------
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----------------------------------------------------------------------------
>reverse_3199
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------GC
CTCGATCGTCAACTGATG--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>forward_2197
--------------------------------------------------------------------------------
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-----------------CTGCCTGGCTTATCTGCACA-------------------------------------------
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----------------------------------------------------------------------------
>reverse_3642
--------------------------------------------------------------------------------
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-----------------------------------------CGGACTAGGACTCTGCTTTGA------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>forward_3199
--------------------------------------------------------------------------------
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-----------------------------------------------------------GCGCTTATGTTGATGCATCG-
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_5251
--------------------------------------------------------------------------------
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--------------------------------------------------GCTGTTGGTTTGTGCCGATT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
