>input_sequence_26848
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-----------------------------------------ATGGTCAAACAACCACGACTCTTCTCCC------CTCCT
CTCCTCTCCCAGCTACTC---CCTTTTCTCCCTCGCCTAGTCTCGCTAGTCCGGTCCTCCTCCTCCTCCTACCCCCTC--
----------CCCTCCTATTGGCCCTCCCGATTTCCTCCTCCTCATCCCTTGAATGACGCGGCGGTTGCTTCTTCTCTGA
ATCCCATCCAT---CCATCCAGGAGGCCGGCAGGGGCGAGACTCGCCGCCGACGCC------------------------
-CTTCTCCGGCGGAAATGGCCGTAAGTCC------TCGCTCCATTCA-TGATTGGTTGGTTGGCAGGCTCGCCGCCGCTG
TCTCCGAGGTGGGGGTGGGGACGT-------GGGGTGGCCGTGTTTGCTCGGATCCGTGGGCTGACTGGTGTCGT-----
-------AGGGAAGATTCTTCTTTTGGGCGGCCGCCGCTCCCTCTTGCCGTCTGCGCCATGTGGGATTTCTTCTTGGAAG
GAATCGCCTTCGGATGGCAGAGATGCCCTTCCCTTTCTTCCCCTTCAGAT----GGTTTGACCAACTTGTCA----TACT
CTGCTTGCTGCC-TGGCTGGCTGGTGGGGAGACAGATTGCGTCAATTTCTTCTCCATGGAATCAATTTCTTCTCCATGGA
ATAAATGTGCCGATTTTTCATTTTTGACCAAAATGGCAACCAAGATCTAGTCTTTCTGTTTGTGCATCCAGAAATGTGAT
TTTGTTGCGTATCCCGTGGTACAAGGAT-AGTTGGTGCCAAAGCTTGTTTGGGTTGTCTTAGTTGTCTTATGCACTAGGC
CACTAGTACAATTTGATCTGATGAAAATATGATTGGTTGAACAAAACTGCAGTTGACACAACAAGACTGAAATGAGCAAA
CATTATGCTATCAGGCGAGGTCAAATAGCAATCCTTATTTTAGTGATGATTAGTCAAATGGAACTCCCCTCTACATCTTA
TTCATGTGTGTGTGTGTGTGTGTGCGCGCGTGTGTGTTATACTTATATGAAACAAAACATGCTCAAGTGGCAACATCTTG
TATTGTACTCCATTATCTTATCATAATCTTGTGTTCAGAGTAGATTAACATGCCCAAGGAATACTCCATTATCCTATCAT
AATCTTGTGTTCAGAGTAGATTACAAGGTTCAGTATTCTGTATGCTCTGAACCATTATCTTATC--TCTTTGTCCAGTTG
TGCTTCTGGTCTCTGGAGTTCATTTAGTATGCCAAGTGCCTTGCCTAGAAAATTACGCGTCTTAATTTAATCTGCTCATC
ACATGTTAAT-------ACTAACAAGTTACTTCCTTGTTCAACCGTACCAGCAA---CATCAAGGAGTTCCTAAATTTGG
GAACTGGGAGGACGAAGGCCAAGGCTACACGCAGTACTTCGAAAACGCCCGCATGGGCAAATCTCCGGGGAGGCCTGTCA
ACCAAAACGATCGCAATGAAGGCGCTGCACAGGCACCCTCGAACGACCCGCCGTCGGTCAAGGCCTCCCCCTTGAGGCCG
GGGTCCGAGCCGGGGCTGCGGAAGAACAGGGACGAAAGGCGTGCCACCCGAGAAGACGACCTCCGTCGCCACGAGGCCGC
TGCCCGGAAAACGCATGCCGAGTCACCTAACCACAGATATGGTGACCAGACCAACTACGACGGCGCTGCAAGGAAAGCAA
GCAATGAGAGGTCACCCATCCATCCTCGGCAGCAGGCAAGGCTTGCAAACAAAGGTGGGGTTTCATCTCCTATTGCGGAT
CGTAGGGGTTCTGCTCCCACCACACCTGGAAGGTCCAAGATGAGGCCAACCGGGCGCGGCGATGAAACGGTAAAGCCGTA
GCTGCTTCTTTGAGTCTCAGTCAAATGAAAACCGTTCTTTTCCTA--TACT-----GAATATGAATG--AAATAATATAT
ATTAGGCAGAATGTAATTGCATTATGAGTATTACTGCTGGTACGTGTACTTTCTGAAGTGCTGTTGTGTGATTTTTGCAC
GTGCAGCCCGAGAGAGGATCAGCTGTGCCAAAGTTTGGAGACTGGGATGAGAAAGATCCTTCGACTGGTGAAGGTTTCAC
TGACATATTTGAGAAGGTGAGGGAGGAGAAGCAGTCCGGTGCGGATACTGTCGGCACCAGCCATGCATACAAGGACCGCT
ACAACCAAGGGGACAGATATGAATCTTCGGTGAGTCTGCTTTTAATTTTGTGTACTGCTGCTGGTTTCACCAAAACTATT
ATCATACATGTGGAGTAAAGATTCCCTATTTTGCTTGTGGAACTAGTTTTCGCCGCTTTAATATCAGCAGCATTGGCCAT
TGAGAATCAAGATGGTGCACCTAGTATAGATACCTAAGATAATTGATTGCTTCCATCTCCACTGCTTTTAGAGATCATAC
CGCCATGCTTAGTTCCACAATAACTGAAAATTGGCCAAGCACTAGTTACTTTCAGCGGTGCAAACTACAGTTCCTTTGAA
TAATTGTCGCAAAATATTGAATACAAAGTCAGCAGTTCCGCCATGCTTTTGTAGTTTTGTTGATGTTGGTTTCACCACAA
ATGTTGTCATACATGTGGAGTAAAGATTCTCTTGTTTTGCTTGTGGAACTAGTTTTCGCCGCTTCAAGCATTGGCCATCG
AGATGCAAGATAGTGCACCAT-----------------------------------------------------------
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-------------------------ACCTAAGATAATTGCTTGCTTCATCTCCAACATTGCAATATACAGTTCCTTAGCA
GAACAATTGCAAAAATATTAAGTAATGTTACTTCTGG---ACTTCTGGTTGTTAAGGGGTTGTGTTATGCGGTAGAGTAG
TTGCTTATGGTAGCGATATCTCAGTCGTGTTTGGTTCATTGAAAATGTGATAGTGTCGATAAATCGCATCTAATAGATGG
TACGTGCGTGTCTGCTTCTTTTTCAGGGCTGCTCATGCTTCAGCTGGTTCAAGAAGTGA---------------------
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>chr4A_1_TraesCS4A01G335300
TAGTCGGTGTGCCCCCCACAACGCCACACCACGCCCATGCTAGGCAGCAATGCTAGCGAATCCTCCGCGCTGGGCGGCGC
CTGCGCACCAAGCCATTGACCCCCAGCCACAGGCCCGCAGGAGCCCAGGACAGGGCCGACTTCCTGCAACTACACGCCAT
TGCGGCACTCGCACCCTCGTTGCCCCGGCAACGTGTGTGTGCACCATCGCGCCATCTAATCCGAGGCCGCCAGCCCGCAG
AGCCCAGATCCGGCCCTGCGGCTGCGACCCCTACTCACACAGGGTGCTTGTGGGCGCATCACCGAATGTAACAAGAGATG
CTAGACTAACCGGACTTTACCGGGGGATTATGAGGTGGTTAGGAAGTGAGGCGGGGCCACTAATGAAAATTGGGTGGGGC
GGGGAAGGGCATTTAGAGAAGCGAAAATCCTACACGTACGAAAGAACCTACGTACAGTTACGAAACCTTGTGTGTAATCT
AAACATCCTCCCTGATTTCAGGCCGGTGGGCCCCGGCCTCACCCAAAGACCAATCCTAATCATCCACGCTTGTTATTACT
TATTGCGTAAGTTACGTAGCCAGGTTTACGTAGGTGTAGCATTGCTCTTAGAGAAGGGCACGCAACGCAGGGTGTTGTCT
TGAAGTATTATCTGAATGTAACACTTAAGTAAAAAAAAAGACGAATGTAACACTCCACAAAGTAAAGCTAAAATTCACCA
ACATGCATGCTAGATACTACATGAACGGTAAATATGATTTCTTG-TTTCCACATTAGTATGGC----AAGAAGCAGTCAG
CCAGTACTAGTCTTCTCTCTTGTGTCACTCTACTGTTGACGATAGGTTAGCGGCAGAGGTAGCTAGCCAAAGTTA-----
-------------ACACCATGATTGATGGAGACTACTCCCTCCCTCCAGCACAGCAGCAGGC------------------
--AGTATTATTAAGGCGATAGGTATAGTAGGAACTAGGA-----------------------------------------
--------------------------------------------------------ACAGGAAGCAGCAGCAGC------
---------------AAGAAGAAGAAGGATCCGACGCCATAATGGTCAAACAACCACGACTCTTCTCCC------CTCCT
CTCCTCTCCCAGCTACTC---CCTTTTCTCCCTCGCCTAGTCTCGCTAGTCCGGTCCTCCTCCTCCTCCTACCCCCTC--
----------CCCTCCTATTGGCCCTCCCGATTTCCTCCTCCTCATCCCTTGAATGACGCGGCGGTTGCTTCTTCTCTGA
ATCCCATCCAT---CCATCCAGGAGGCCGGCAGGGGCGAGACTCGCCGCCGACGCC------------------------
-CTTCTCCGGCGGAAATGGCCGTAAGTCC------TCGCTCCATTCA-TGATTGGTTGGTTGGCAGGCTCGCCGCCGCTG
TCTCCGAGGTGGGGGTGGGGACGT-------GGGGTGGCCGTGTTTGCTCGGATCCGTGGGCTGACTGGTGTCGT-----
-------AGGGAAGATTCTTCTTTTGGGCGGCCGCCGCTCCCTCTTGCCGTCTGCGCCATGTGGGATTTCTTCTTGGAAG
GAATCGCCTTCGGATGGCAGAGATGCCCTTCCCTTTCTTCCCCTTCAGAT----GGTTTGACCAACTTGTCA----TACT
CTGCTTGCTGCC-TGGCTGGCTGGTGGGGAGACAGATTGCGTCAATTTCTTCTCCATGGAATCAATTTCTTCTCCATGGA
ATAAATGTGCCGATTTTTCATTTTTGACCAAAATGGCAACCAAGATCTAGTCTTTCTGTTTGTGCATCCAGAAATGTGAT
TTTGTTGCGTATCCCGTGGTACAAGGAT-AGTTGGTGCCAAAGCTTGTTTGGGTTGTCTTAGTTGTCTTATGCACTAGGC
CACTAGTACAATTTGATCTGATGAAAATATGATTGGTTGAACAAAACTGCAGTTGACACAACAAGACTGAAATGAGCAAA
CATTATGCTATCAGGCGAGGTCAAATAGCAATCCTTATTTTAGTGATGATTAGTCAAATGGAACTCCCCTCTACATCTTA
TTCATGTGTGTGTGTGTGTGTGTGCGCGCGTGTGTGTTATACTTATATGAAACAAAACATGCTCAAGTGGCAACATCTTG
TATTGTACTCCATTATCTTATCATAATCTTGTGTTCAGAGTAGATTAACATGCCCAAGGAATACTCCATTATCCTATCAT
AATCTTGTGTTCAGAGTAGATTACAAGGTTCAGTATTCTGTATGCTCTGAACCATTATCTTATC--TCTTTGTCCAGTTG
TGCTTCTGGTCTCTGGAGTTCATTTAGTATGCCAAGTGCCTTGCCTAGAAAATTACGCGTCTTAATTTAATCTGCTCATC
ACATGTTAAT-------ACTAACAAGTTACTTCCTTGTTCAACCGTACCAGCAA---CATCAAGGAGTTCCTAAATTTGG
GAACTGGGAGGACGAAGGCCAAGGCTACACGCAGTACTTCGAAAACGCCCGCATGGGCAAATCTCCGGGGAGGCCTGTCA
ACCAAAACGATCGCAATGAAGGCGCTGCACAGGCACCCTCGAACGACCCGCCGTCGGTCAAGGCCTCCCCCTTGAGGCCG
GGGTCCGAGCCGGGGCTGCGGAAGAACAGGGACGAAAGGCGTGCCACCCGAGAAGACGACCTCCGTCGCCACGAGGCCGC
TGCCCGGAAAACGCATGCCGAGTCACCTAACCACAGATATGGTGACCAGACCAACTACGACGGCGCTGCAAGGAAAGCAA
GCAATGAGAGGTCACCCATCCATCCTCGGCAGCAGGCAAGGCTTGCAAACAAAGGTGGGGTTTCATCTCCTATTGCGGAT
CGTAGGGGTTCTGCTCCCACCACACCTGGAAGGTCCAAGATGAGGCCAACCGGGCGCGGCGATGAAACGGTAAAGCCGTA
GCTGCTTCTTTGAGTCTCAGTCAAATGAAAACCGTTCTTTTCCTA--TACT-----GAATATGAATG--AAATAATATAT
ATTAGGCAGAATGTAATTGCATTATGAGTATTACTGCTGGTACGTGTACTTTCTGAAGTGCTGTTGTGTGATTTTTGCAC
GTGCAGCCCGAGAGAGGATCAGCTGTGCCAAAGTTTGGAGACTGGGATGAGAAAGATCCTTCGACTGGTGAAGGTTTCAC
TGACATATTTGAGAAGGTGAGGGAGGAGAAGCAGTCCGGTGCGGATACTGTCGGCACCAGCCATGCATACAAGGACCGCT
ACAACCAAGGGGACAGATATGAATCTTCGGTGAGTCTGCTTTTAATTTTGTGTACTGCTGCTGGTTTCACCAAAACTATT
ATCATACATGTGGAGTAAAGATTCCCTATTTTGCTTGTGGAACTAGTTTTCGCCGCTTTAATATCAGCAGCATTGGCCAT
TGAGAATCAAGATGGTGCACCTAGTATAGATACCTAAGATAATTGATTGCTTCCATCTCCACTGCTTTTAGAGATCATAC
CGCCATGCTTAGTTCCACAATAACTGAAAATTGGCCAAGCACTAGTTACTTTCAGCGGTGCAAACTACAGTTCCTTTGAA
TAATTGTCGCAAAATATTGAATACAAAGTCAGCAGTTCCGCCATGCTTTTGTAGTTTTGTTGATGTTGGTTTCACCACAA
ATGTTGTCATACATGTGGAGTAAAGATTCTCTTGTTTTGCTTGTGGAACTAGTTTTCGCCGCTTCAAGCATTGGCCATCG
AGATGCAAGATAGTGCACCAT-----------------------------------------------------------
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-------------------------ACCTAAGATAATTGCTTGCTTCATCTCCAACATTGCAATATACAGTTCCTTAGCA
GAACAATTGCAAAAATATTAAGTAATGTTACTTCTGG---ACTTCTGGTTGTTAAGGGGTTGTGTTATGCGGTAGAGTAG
TTGCTTATGGTAGCGATATCTCAGTCGTGTTTGGTTCATTGAAAATGTGATAGTGTCGATAAATCGCATCTAATAGATGG
TACGTGCGTGTCTGCTTCTTTTTCAGGGCTGCTCATGCTTCAGCTGGTTCAAGAAGTGACACCCACCCTGTCTGTAACAT
ACCTGTGGCGATTGTATCTTTGTGAAATGAGTAGCCAAATCTGTTGTT---TTGTTGAGATGTTATGTTATAGCGAGACA
TGTATCGGAGCATGAATTATTCACAAGGCTGTGATTCAGCATTTTC-TTGAGCATTTGTAATCAGTGGTTGGTTTCCTGA
GTTTTGCAACAATTGTCTCATTCCTGGATTAAAGGGGAAGCAGGTTGGGAAATAAGGACGGTTTGTAAAACTTGTCACAA
GCCAACTGATATAGTAAAGGCCGTGAAAAAGAATCAAAAGGCCTTGCATTTACAGACAGTAGTTGATATTCTGATCGTAC
AACAGCTTAGCAGATTGTCCAGTAAAATTTATATGGTTAT---TCAGAGAGAAAATGTATGATACACGTTTTGAATATTT
CATTGTAAAATCTGGATTCTGGAGGTGACAGACCAGTAAATTCAAACAATGACAGCGATC-AAGGTCCAGCGCTCTACTA
CATAAAAGTCTCACGAATCTCCAAACTAATGAACAACACCAGACATATCTACGCAATCCCAAGGACCTATAGGCAACATG
TTCTATGTACTGACAATGTGTTTTACATCAAAACTGGATGCTATCTTGCTTGTCTTTAGGGGCGACGCACTGCCAGAGAG
ATCTGTAGGATTCAATTTCTCTCGCATCTATTCCCAGGGTGCGAAGGTTCCGCGCATATTCCTAC---------------
AAACAATGTGTCAGCAGGAGTGCAATGCA--TCTGATACACAT-------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CTGGTAAG
GGGAAAAAGATTGTACATAGAAAGAACCAAAAGGGGGAATACCACAAAG------AAAAACCAGTTGATGAAAGATGAAT
CTATATGCTTTATGAGCATGAGGGT-AAAAGACAGTTAGCGAACCTGAATATCAAGGAATAGTTGCATGCAGATCTTGTC
GGTGTCAGATATGATGTTATCTGAGGCATCAGTACTACCTCCTATTCGTTTTTGTTGTCCTTGGCGCAGTCTTTGCAACG
>chr5D_722
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-CATGGATGCTAGA---TACATGAATGGTAAATATGATTATTATTTTTCCACATTGGTGGTATTAGGAAGAAGCAGTGAG
CCAGTCTA--------CTCTTGTGTCACTGTATCGTTGACGACAGGTTACCGGCAGAGCGTTGCGCGGTAATGGCGTCCG
TAGCTAGCTATCTACACCATGATTGATGGAGACTACTCCCTCCCTCCCTCCAGCCTCCAGCACACCACAGCAGGCGAGAG
AGAGTATTATTAAGGCGATAGGTAGGAACAGAGGCCCGCCGTAGAAGCCGTGCACCACGGAGCCACCACCACCACCACAA
CCTCCACTCTCCACCGCATCCGGCGGCGGGGAAGCCGGCCTGGGGGAAGGCAAGCGACAGGAAGCCGCAGCAGCGCCACC
AGCAGCAAGAAGAAGAAGAAGAAGAAGAATCGGACGCCATAATGGTCAAACAAGCACGACTCTTCTCCC------CTCCT
CTCCTCTCCCAGCTACTACTACCTTTTCTCCCTCGCCTAGTCTCGCTAGCCCGGTCCTCCTCCC---------------C
CCTGCTGCCGCCCTCCTATTGGCCGGCCCGATTTCCTCCTCATC--CCGTTGAATGACGCGCCGGTTGCTTCTCTGAATC
-------CCAT---CCATCCAGGAGGCCGGCAGGGGCGAGCG----CACCGACGCGTGAGGGACTCGCCGCCGACGCTGA
TCTTCTCCGGCGGAAATGGCCGTAAGTCC------TCGCTCCATTGGTTGGTTGGTTGGTTGACCGGCTCGCCGC-GCTG
TCACCGGGGTGGG---------GT-------GGGGTGGCCGTGCTTGCTTGGATCCGTGGGTTGACTGCTGTCCTGAGAG
GCGAGCAAGGGAAGAAGATTCTTCCCCTTATTCTTGGGCG-------------GCGCCATGTGGGATTTCTTGC---AAG
GAATCGGCTTCAGATGGGAGAGACGCCATTCCTTTTCTTCCCCGGTGCTAGCTAGGTTTGACCAACTTGTCA----TGTT
CTGCTTGCTGGATTGGCTGGCTGGTGGGGAGACAGATTGCG-------------CATGGAATCAATTTGTTCTCCATGGA
ATAAATGTGCCGATTTTTCATTTTC-ACCAAAATGGCAACCAAGATCTAGTCTTTTTGTTTGTGCATCCAGAAATGTGAT
CTTGTTGCGTATCCGGCGGTACAAGGAAAAGTTGGTGACAAAGCTTGCCTGAGTTGTTGTTTATACAGTACTGCTACTAC
------------TTGATTTGATGAAAATATGTTTGCTTGAGCAAAACTGCAGTTGACACAATAAGACTGCAGTGAGCAAA
CAATATGCTATCAGGCGTGGTCAAATGGCAATGCTTATTTTAGTGATGATTAGTCAAATGGAACTCCCCTCTACATCTTA
TTCATGTGTGTG------------------------------TTATATGAAACAAAACATGCTCAAGTGGCAACATCTTG
TATTGTGGATTACTAGATTTT-----------------------------------------------------------
--------------------------------GTATTCTGTATGCTCTGAACGATTATCTTATATATCTTTGTCCAGTTG
TGTTTCTAGGGTC---AGTCCATTTAGTATGCCAAGTGCATTACCTAAAAAATTACGCGTCTTAATTTAATCTGCTCATC
ACATGTTAATTAAC---ACTAACAAGCTGCTTCCTTGTTCAACCGTACCAGCAA---CATCAAGGGGTTCCTAAATTTGG
GAACTGGGAGGACGAAGGCCAAGGCTACACGCAGTACTTCGAGAACGCCCGCATGGGCAAATCTCCGGGAAGGCCTGTCA
ACCAGAACGATCGCAATGAAGGCGCTGCACAAGCACCCTCTAACGACCCACCGTCGGTCAAGGCCTCTCCCTTGAGGCCG
GGGTCCGAGCCGGGGCTGCGGAAGAACCGGGACGAAAGGCGTGCCACCCGAGAAGAC---CTCCGTCGGCACGAGGCCGC
TGCCCGGAAAACGCATGCCGAGTCGCCTAACCACAGATATGGTGACCAGACCAACTACGACGGTGCTGCGAGGAAAGCAA
GCAATGAGAGGTCACCCATCCATCCTCGGCAGCAGGCAAGGCTTGCAGACAAAGGTGGGGTTTCATCTCCTATTGCGGAT
CGTAGGGGTTCTGCTCCCACCACACCTGGAAGGTCCAAGATGAGGCCAACTGGGCGCGGCGATGAAACGGTAAGGTCCTA
GCTGCTTCTGTGAGTCTCAGTCAAATGAAAACCATTTCTTTTCTTTTTTTGTATACGACTATGAATG--AAAAAA----T
ATTAAGCAGAATGTAATTGCATTATAAGTATTACTGCTGGTACGTGTACTTTCTGAAGTGCTGTTGTGTGATTTTTGCAC
GTGCAGCCCGAGAGAGGGTCAGCTGTTCCAAAGTTTGGAGACTGGGATGAGAAAGATCCTTCGACTGGTGAAGGTTTCAC
TGACATATTTGAGAAGGTGAGGGAGGAGAAGCAGTCCGGCGCGGATACTGTCGGTACCAGCCACGCATATAAGGACCGCT
ACAACCAAGGGGACAGATATGAATCTTCGGTGAGTCTGC-TTTAATTTTGTGTACTGCTGCTGGTTTCACCAAAACTATT
ATCATACATGTGGAGTAAAGATTCCCTATTTTGCTTGTAGAACTAGTTTTCGCCGCTTC-ATATCAGCAGAATTGGCCAC
TGAGAATCAAGATATATAGA------------------------------------------------------------
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--------------GCACCTAGATATCTAAGATAACTGATTGCTTCATCTCCACTGCTTTTAGAGATCACACTGCCATGC
TAAAGATTCTTCCACCATTGATACCTAAGATAACTTAGTGCACCTAGATACCTAAGATTGCTGCTTGCTTTATCTCCACC
GCTGTTAGAGACTGTACCACCATGCCTAGTTCCACAACAACTGAAAATTGGCTAAGCACTAGTTACTTTGAGCGGTACAA
ACTACAGTTCCTTAGAATAATCGTCACAAAATATTGAGTACAAACCCAGCAGTTCCGCCATGTTTTTGTTGATGTTGGTT
TCACCACAAATGTTGGCATACAGACACCTAAGATAATTGCTTGCTTCATGTCCAACATTGCAATCTACAGTTCCTGAGCA
GAATAGTTGCAAAAATATTAAGTACCAACCCAGCAATGTTACTTCTGGTTGTTAAGGGGTTGTGTTATGCAGTAGAGTAG
TTGCTTATGGTAGCAATAGCTCTGTCGTGTACGGTTCATTGAAAATGTGTT------GATAAATCGCATCTAATAGATGG
TACGTGTCTG-------CTTTTTCAGGGCTGCTCATGCTTCAGCTGGTTCAAGAAGTGACACCCACCCTGTCTGTAACAT
ACCTGTGGCGATTGTATCTTTGTGAAATGAGTAGCCAAATCTGTTGTT---TTGTTGAGATGTTATGTTACAGCGAGACA
TGTATCGGAGCATGAATTATTCGCAAGGCTGTGATTCAGCATTTTTTTTGAGCATTTGTAATCAGTGGTTGGTTTCCTGA
ATTTTGCAACAATTGTCTCATTGCTGGATTAAAGGGGAAGCAGATTGGGAAATAAGGACAATTTGTAAAACTTATCACAA
GCCAACAGATATAGTGAAGGCCATGAAAAAGAATCAAAAGGCCTTGCATTTACAGACACTAGTTGATATTCTGATCATAC
AACAGCCGAGCAGATTGTCCGGTGAAATTCATATGGTTATTCA---GAGAGAAAAGGTATG--ACACGTTTTGAATATAT
CATTGTAAAATCTGGATTCTGGAGGTGACCGGCTAGTAAATTCAAACAATGACAGCGATC-AAGGTCCAGCGCTCTACCA
CGTATAAATCTCACGAATCTCCAACCTAATGAACAACACCAGACATATCTACGCAATCCCAAGGACCTATAGGCAACATT
TTCTATGTACTGACAATGTGTTTTACATCAAAACTGGATGCTATCTTGCTTGTCTTTAGGGGCGACGCACTGCCAGAGAG
ATCTGTAGGATTCAATTTCTCTCGCATCTATTCCCAGGGTGCGAAGGTTCCGCGCATATTCCTGCAAAACAATGCATGTG
AAACAATGTGTCAGCAGCAGCGCAATGCA--TCTGATACACATGTACTTTCTAAACATGTTTAATCACATAAGCTGCTTC
GACACTTTGTCTGCTATCTTCTCTATTCTCCTAAGTACAATCCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTAGTGTAGCAGAGATTGCAAATGTTTCAAGTGTCGCATGCAGAAAACGGAGTTCAGGTTTGAAGAAACTG-----
------AATATTGTACATAGAAAGAACCAAAAGGGGGAATGCCACACCCCC-AAAAAAAAACAGTTGATGAAAGATGGAT
CTATAAGATTTATGAGAATGAGCGTAAAAAGACAGTTAGCGGACCTGAATATCAAGGAATAGCTGCATGCAGATCTTGTC
GGTGTCAGATATGATGTTATCTGAGGCATCAGTACTACCTCCTATTCGTTTTTGTTGTCCTTGGCGCAGTCTTTGCAACG
>chr5B_975
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---------------AAGGAGAAGAAGAATCGGACGCCATAATGGTCAACCAACCACGACTCTTCTCCCCCTCCTCTCCT
CTCCTCTCCCAGCTACTA---CCTTTTCTCCCTCGCCTAGTCTCGCTAGTCCGGTCCTCCTCCTCCTCCTACCCCCTCGC
CCTGCTGCCGCCCTCCTATTGGCCGGCCCGATTTCCTCCTCATC--CCGTTGAATGACGCGGCGGTTGCTCCTTCTCTGA
ATCCCATCATCCAGCCATCCAGGAGGCCGGCAGGGGCGAGCG----CGCCGACGCC------------------------
-CTTCTCCGGCGGAAATGGCCGTAAGTCCCCGCCCTCGCTCCATTGGTTGGTTGGTTGGTTGGCCGGCTCGCCGCCGCCG
TCTCCGAGGTGTG---------GTGGGGGTGGGGGTGGCCGTGCTTGCTTGGATCCGTGGGTTGACCGGTGCCGTGGGAG
GCGAGCAAGGGAAGATTCTTCCTCTTCTTGG------------------------GCCATGTGGGATTTCTTCTTGGAAG
GAATCGCCTTCGGATTGCAGATATGCCATTCCTTTTCTTCCCCAGT----GCTAGATTTGACCAACTAGTCAGTCGTATT
CTGCTTGCTGGATTGCCTGGCTGGTGGGGACACAGATTGCCCTGCGC----CTCCATGGAATCAGTTTGTTCTCCATGGA
ATAAATGTGCCGATTCTTCATTTTC-ACCGAAATGGCAACCAAGATCTAGACTTTTGTTTTATGCATCCAGAAATGTGAT
TTTGTTGCGTATCCGGTGGTACAAGAGT-AGTTGGTGGCAACCCTTGTTTTTGTTGTCAG--------------TACTAC
------------TTGATTTGATGAAAATATGTTTGGTTGAGCAAAACTGCAGTTGGCACTATAA------------CAGA
TAATATGCTAGCAGGCGAGGTCAAATAACAATGCTTATTTTAGTGATGATTAGTCAAATGGAACACCCCTCTACATCTTA
TTCATGCGTGTGTGTGTGTGTGTGTGT--GTGTGTGTTATACTTATATGAAACAAAACATGCTCAAGTGGCAACATCTTG
TATTGTACTCCATTATCTTATCATAATCT---------------------------------------------------
-----TGTGTTCAGAGTAGATTACAAGGTTCAGTATTCTGTATGCTCTGAACCATTATCTTATC--TCTTTGTCCAGTTG
TGTTTTTGGTCTCTAGAGTTCATTTAGTATGCCAAGTGCATTGCCTAAAAAATTACGCGTCTTAATTTAATCTGCTCATC
ACATGTTAATTTATAGTACTAACAAGCTGCTTCCTCCTTCAACCTTACCAGCAGCAGCATCAAGGGGTTCCTAAATTTGG
GAACTGGGAGGACGAGGGCCAAGGCTACACGCAGTACTTCGAAAACGCCCGCA------AATCTCCAGGAAGGCCCGTCA
ACCAGAACGATCGCAACCAAGGCGCTGCACAGGCACCCCCGAACGACCCGCCGTCGGTCAAGGCCTCCCCCTTGAGGCCG
GGGTCCGAGCCGGGGCTGCGCAAGAACAGGGACGAAAGGCGTGCCACCCGAGAAGACGACCTCCGTCGGCACGAGCCCGC
TGCCCGGAAAACACATGCCGAGTCGCCCAACCATAGATATGGTGACCAGAGCAACTACGAAGGCGCTGCGAGGAAAGCGA
GCAATGAGAGGTCACCCATCCATCCTCGGCAGCAGGCAAGGCTTGCAAACAAAGGTGGGGTTTCATCTCCTGTTGCGGAT
CGCAGGGGTTCTGCTCCCACCACGCCTGGAAGGTCCAAGATGAGGCCAACCGGCCGCGGCGATGAAACGGTAAGGTCCTG
GATGCTTCTGTGAGCCTCAGTCAAATGAAAACCATTTCTTCTTTGTGTACT-----GACTATGAATGAAAAAAAA----T
ATTAAGCAGAATGTAATTGCATTGTAAGTATTACTGCTGGTATGCGTACTTTCTGAAGTGCTGGTGTGTGATTTTTGCAC
GTGCAGCCCGAGAGAGGATCAGCTGTGCCGAAGTTTGGAGACTGGGATGAGAAAGACCCTTCGACTGGTGAAGGTTTCAC
TGACATATTTGAGAAGGTGAGGGAGGAGAAGCAGTCCGGCGCGGATACTGTCGGCACCAGCCATGCATATAAGGACCGCT
ACAACCAAGGGGACAGATATGAATCTTCGGTGAGTCCGC-TTTAATCTTGTGTACTGCAGCTGGTTTCACCA--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CAA
ATGCTGTCATACATGTGGAGTAAAGATTCTCTTGTTTTGCTTGTGGAACTAGTTTTCGCCGCTTCAAGCATTGGCCATTC
AGAAGCAAGATAGTGCACCTAGATACCTAAGATAATTGCTTGCTTCATCTCCAATACTA---------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------CAATCTACAGTTCCTGAGCA
GAATAGTTGCAAAAATATTAAGTACCAGCCCAGCAATGTTACTTCTGGACTTCTT----------------GTAGAGTAG
TTGCTTATGGTAGCAATATCTCAGCCGTGTTCGGTTCATTGAAAATGTGATAGTGTCGATAAATCGCATCTAATAGACGG
TACGTGTGTGTCTGCTTCTTTTTCAGGGCTGCTCATGCTTCAGCTGGTTCAAGAAGTGACACCCACCCTGCCTGTAACAT
ACCTGTGGCGATTGTATCTTTGTGAAATGAGTAGCCAAATCTGTTGTTATTTTGTTGAGATGTTATGTTATAGCGAGACA
TGTATCGGAGCATGAATTATTCGCAAGGCTGTGATTCAGCATTTTTTTTGAGCATTTGTAATCAGTGGTTGGTTTCCTGA
ATTTTGCAACAATTGTCTCATTCCTGGATTAAAGGGGAAGCAGGTTGGGAAATAAGGGCGATTTGTAAAACTTGTCACAA
GCCAACCCATATAGTAAAGGCCGTGAAAAAGAATCAAAAGGCCTTGCATTTACAGACAGTAGTTGATATTCTGATCTTAC
AACAGCTGAGCAGATTGTCCGGTGAAATTCATATAGTTATTCATCAGAGAGAAAATGTATGATACACGTTTTGAATATAT
CGTTGTAAAATCTGGATTCTGGAGGTGACAGACTAGTAAATTCAAACAATGACGGCGATCAAAGGTCCAGCGCTCTACTA
CATATA---------AATCTCCAAACTAATGAACAACACCAGACATATCTACGCAATCCCAAGGACCTATAGGCAACATG
TTCTATGTACTGACAGTATGTTTTACATCAAAACTGGATGCTATCTTGCTTGTCTTTAGGGGCGACGCACTGCCAGAGAG
ATCTGTAGGATTCGATTTCTCTCGCGTCTATTCCCAGGGTGCGAAGGTTCCGCGCATATTCCTGCGAAACAATGCATGTG
AAACGATGTGTCAGCAGCAGCGCAATGCACGTCTGATACACATGTACTTTCTAAACATGTTTAATCACATAAGCTGCCTC
GACACTTTGTCTGCTATGTTCTCTGTTCTACTAAATAGAAGCATTTC--------------------------------T
GTGTGTAGTGTAGCAGAGATTGCCAATGTTGCAAGTGTCGCATGCAGAAAACGGAGTTCAGGTTTGAAGAAACTGGTAAG
GGAAAGAATATTGTACATAGAAAGAACCAAAAGGGGGAATGCCACACCCCAAAAAAAAAAACAGTTGATGAAAGATGGAT
CTATATGATTTATGAGAATGAGCGTACAAAGACAGTTAGCGGACCTGAATATCAAGGAATAGCTGCATGCAGATCTTGTC
GGTGTCAGATATGATGTTATCTGAGGCATCAGTACTACCTCCTATTCGTTTCTGTTGTCCTTGGCGCAGTCTTTGCAACG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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S----S--------SSS--------S-------------SS-SS-----------S--SSSSS--------------S--
-----SSSSSSSSSSS-------------S--SS--------S------S--------SSSSSSSSSSS--SSSS-----
-----------------------------------------------SS-SSSS-SS---SS------------------
------------------------SSSSSS--SSSSS-S-----------------------------------------
-----------------------------------------------------------------S--------------
---------------------------S---S------------------------------------------------
-----------------S--------------------------------------------------------------
------------------------SS---------------S--SS--S-------------------------------
----------------------------------------SSSSSS----------------------------------
---------------------------------------------SS---S-------------S---------------
-------------SSSSSSSSS---------------------S-----S-----------S------------------
-----------------------S-SSSS--S-SSS-SSSSSSSSSSSSSSSS---------------------------
---------------------------S----S----------SSSSSSS----------------------------S-
----------SS-----------------------------SSSSSSSSSS-----------------S-----------
------------------------SS-----------------------------S------------------------
--------------S----------------------S-------------S------S-SSS-SSSS--SSSSSSSSS-
SSSSSSSSSSSS-----S-------------S--------S--------------------S-------S-S--------
--S-----------------------------S-----------------------------------------------
------------------------S-SSS---------------------------------------------------
-----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS---------------------------------------------------------------------------
--S-----------S------------------------S-------S--------------------------------
--------------------------S-S------------------------------------S--------------
---------------------------------------------------------------------S----------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
------------------------S--------------------------------------------S----------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S-S-S--
---------S-----------------------S--SS---S--S-------------S-------------S--SSSS-
----S--------------------S------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S-----------------------------S----------
---------------------------------------S----------------------------------------
--------------------------------------S-------------------SS----------S--------S
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
---S--------------------------------------------------------------------------SS
---S---------------SS-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S--------------S----------S----
---S-S------------------SSSSSS-SS-SSS---------------------------------S---------
--------------S----------------S------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S----------------------S----------------------------------
S-----------------------------------------------------------S-------------------
------S---------------------------------------------------------------------S---
-------S------------S--S-----S------------------------------------------------S-
---------------------------------S----------------------------------------------
----S--S------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
-----------------S--S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S--S--S-------------------------------S-----SSS-----------S----------------S--
-------S--------S-----S------------------S--------------------S-----------------
--------------------------------------------------------------------------------
>forward_312
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------GGCGCATCACCGAATGTAAC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>reverse_1306
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TCCCGATTTCCTCCTCCTCA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>forward_642
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CAACGCAGGGTGTTGTCT
TG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
>reverse_2630
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------GAGGCCTGTCA
ACCAAAACG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1805
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------GGGGAGACAGATTGCGTCAA-----------------------------------
--------------------------------------------------------------------------------
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>reverse_3652
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TCAGCGGTGCAAACTACAGT---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_3036
--------------------------------------------------------------------------------
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--------------------------------------------------------CGGCGATGAAACGGTAAAGC----
--------------------------------------------------------------------------------
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>reverse_5583
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TTGCATGCAGATCTTGTC
GG------------------------------------------------------------------------------
