>input_sequence_26749
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----ATGAGTGCAAGCAACTTTGGGGACAGCATGGAGTGGGGCAGGGGGAGATCCTCCTCCTCCTCGTCGGGGTCGGGGT
CGGGGTCCAGGAGGGGCAAGAGAGCCGCCGCCGTTGACAAGCCGAGGCAACCGCAGCGGGGCCTCGGCGTCGCGCAGCTT
GAGAAGATCAGGTTGCAGGCCGAAATGGCCGAGTACCAGCACCACCCTCCTCTCGTCGGACAGCCACCTCCGTCGTCGTC
GATCCACGGAACCGGTAGCTTCAACCTGCAGGTAATCACTCATCGCATGTTCATGCACGAAGTAGCTAGCTTGATGCTTA
ATTACTTGTGTTATATTCATTAACCGGGCTGTCTGATCTTATCAATACATGTCTATTAGGTGCATGATTTCTGATTTGGT
A----TGATTTTGGAATTTGATTGGTTGATCGAGCAGGAAGATGCACGCTCGTCGTTGAACTACTCACTGCCGTCGTCGC
CGTCCTCCTCC---------------------------------------TTCC--------------------------
-------------ATCCAAATCTTGTGGTACGTGCAATTTTACTAAACCGAGGATTAAGTTCTTCACCAAGTGCATCTAG
TACTGTACTATACATGCTAGCAGTTGGTTTCACACTTACCAAAACGTTGCCTGATGTATGTTACCGGTAGGTAGGTTAAT
TTAGATGGCTCCCTAGATTAAAGATGCATGGTCATTCATTATGGATAGTTTGGTTGATTACACATAATACAGTGCTTTCT
CAATCTTATCACAAAGAGCCATGCTATCG-TATGATCTTTTCTGCACAATTTTCTTCTTCTGCTAC---TCATCAGACCA
TTCACATGCTAGTGCAAATTGCGGGCAACCATCCGATTTTGTGTTGTGCTTGAGTCATATCGTACGTGCAGTTGTTTCGT
ATGACAAATGTAAGTGGGGTTTGATCATCGACACGGTCTCGTAGGTGAAATCAATTTATATGAACATATTCCTTTCAGAT
AAAAATATTTATTCACTACAGAAATCCAGAGATGAGTGAATGGCAGCTGTTTATTAACATCAATATATGTTATATACCAT
TGTACTGGATTCATCGAAATCTTTT--GGTATATGCAATTTTACTGAACTGGGAATTAAATTCGTCACTAAGTGTATCAA
TTAAGTACTTTATATAGATGCTAAGATTTGATTTCATATTACCAAAATATTGCTCAGTTAATCATTGTTATCGCCTTAAT
CCGTGGC--TGCGTTAATGATTATTGTCCATTCATTTTTGATAATTTAGTTGACTAAACAAAATTTAGTAACAAAAAAAA
TCAGCGATCACCCCACAAGATCAGGAAAAGTTGGACAGAAAATCTATCTTAATTATGTAAATTTCCCTTTAATTTTTGTT
CTGACGCTTTAAATCGTCCCAGCAATACTTTTCTAGTAGTACCATGTGCTAGCTGTATCAATAATGCACCATAATATGAT
ACACTATGTTAGAACCTTTTTGTATATGTATACGTGTGAATCCGCGGGGAAGAACAAGAGTATCATTGCAACCAAAGATC
AGATTTTATTCTCCCATGCACGTGATAGCCTTATCATCATGCATCCTGCATATCTTATGCCCGGTATGTGCTGCCTAACC
AGACATGCATGTGTATTGTAACATACATAGATGGCCTATAATGGATGGAGATCAGGAGACATGAGATATGGCGAATCCCC
AACTGCTCCCATCATCAGGTATCTATTAGTACTAGCCTGTGTCCAATGCAAGGTCCACGTACGATCTAAACTGCAAATGT
CCCAGACAGAATTAATTAATATTATTATTCTCTCATATAATTAACCTTCAGATCAGGGTTGAATTACCATGGAGCAACTA
CCTATGGTACAACACATTACCCTCATCCGGGTAGCGATCACACGTTACCTCTCTTCGAACCCAAGGTCGGTGGGTATGCA
GAAGTGTATTTATACGATCATGGATAATCGAACTGTTAAAAATGATGCATGCTGCACCAAAATTTACATCCAAAATCATG
AAGTATAT-----------------------AAGGATGAGCTAGATATACACACATGCATGAGATACTTTTTGTTGCTCC
CTACATAATCTTAATCTAATTTCACAAATATTCATCTGGTAGTTTTTGGAAAAAATCATATACCCTTCTTTACTCAGCAC
TATATATCTGTGCCTTTTTAATTGTTTTTCCTACTCCTAAGTACTCTC-GAGTTTATTTGGTATACATGAGATTTTTGTT
AGTGTTTTGTATGTAAAGTTTATTTTTTGGGATTGCTTGGGGGT-------------GGGGGTA----------------
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----------------------------------------------------------ATACAATGTGTTAATGCATTTG
CTTTCAAGATGTGTGTGT--CATC---------------------TATTTCTTTTGAATAATGCTTTAAATGTAACATCA
ATTCTCTGATGGTTGACATATG-GGGCTTAAAGTTTTGTTGTGCTAATTGTAGTGCACGTTTGATTCAATATACACTAGT
ATTTCTTGAGATGCAACATGTCTTGTCCAGTTTCCTTCATCGCCAATAATATTGAAGATATGTAAGAAAATGCTATAAGA
AACTACACTTGTATTTGTAGAAAGTACCACTTG-TTTTTGTTTCGGTTATGTCAGTCCAACA-----TGCTTGAGCGCAC
GGTTTACTGACATGGTACTGC--AAACCAGTTCCTAGATTTTTCTTTTTGCTGCTAAATATCTATATG-TGCAATGTGAT
GATGTACTTAAAGCCAGTCCAACAATGTGCCATCTTA---------------TGTCCATTATAGAGTTTACTCCGATCCA
ATCAAAATTTACATTTGCTCATAAATAAGCTGTTAATTGTTGTGAAAAAAAATATGTTGACTCCATTTGTTTCATGTGAC
AGCTGGACCTAAATCAAATGGCGACAGTAGACTCATCGTCGGCGAGTACGAACCTGGATGATGTGGACCTTGAGCTGAAG
CTATGA--------------------------------------------------------------------------
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>chr1B_1_TraesCS1B01G417900
CACCTTTCCTCGATGTGATTTTGTTGACTTTTCATTTTGGTGGGGCCTGCGGTCGATATATATGTGTACAAAACGGAAAT
CCCCTCCAATG---------------------------------------------------------------------
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----------------------ATCACATGCTTGCGTTTCTGATGGCGGAAGGGCTGACGTTGGGAGGAGCAGCAGCGGT
CGCGATATGTAAAAGTAAACTTTTTATCAACAATTTCTTCCATGTCATTTTAGGCATATACTAGTGTTACTAGGAATTAT
GGGCCCTCGGCCCATATGAATAATATTTCCTGTAAAATCCCATAGGCTCCTCTTGGATGTATGACATGTGTG--CAAAAT
TGGTCTCATGTTGCTACTGGATATGAGAGAGTACAACAAGATATAAATAGGCAGTATAATATATTTTTAGAATTTGCAAA
AAGGCTAGATATGCCAAGCTGAACACACTATTATGGTAGAATCACTAGTGACGAGTCCAAAATAAATCGATCGTTAGCTC
TATAGGAATTCCCCAAGTCTATCCATGTTGTTTGATGTGAGGGGTAGGTCGAACATCGTGTGGCGAGCTTCCCCAACTTT
AATCTATAATTGTTCA----------------------------------------------------------------
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-----------------------------------------------TGTATGCAATCGTATGATCCTCCAATTGTCTAA
AGTAGTGGAAATTGTACTACTTAAGACTTGGATTTTAGTTAGGGGATCGTCTCTGATCTGAACCCCTTTTGACTCTTCTT
TCGTTAATGTGGTTTGGGTCACATGGTATCGATCGATTGCATAAACTAACACACCAAGGCCATGGCACTATATATAGCTA
TCTTAACATAAATAATGAAATCAAGCTTTCGTTTAGGCAGGCTGGAGTCTCCATTTAATAATTAAGAGGGATCGATACTG
GGCGTGCAAGGCGATCTCTCCCTTTCACTTTAAGTGGCCGGCCCTCTCGACACCACCCAGCTTCTCCTTTTCCTCCACCT
CCTTTTCTTGCCCCCATTTCTGGGTCGTCTCCTACCTAGGTCTTGTCTGTTGGTAGCTATACCTGGGTACGATCCCATGA
GGCTATGAGTGCAAGCAACTTTGGGGACAGCATGGAGTGGGGCAGGGGGAGATCCTCCTCCTCCTCGTCGGGGTCGGGGT
CGGGGTCCAGGAGGGGCAAGAGAGCCGCCGCCGTTGACAAGCCGAGGCAACCGCAGCGGGGCCTCGGCGTCGCGCAGCTT
GAGAAGATCAGGTTGCAGGCCGAAATGGCCGAGTACCAGCACCACCCTCCTCTCGTCGGACAGCCACCTCCGTCGTCGTC
GATCCACGGAACCGGTAGCTTCAACCTGCAGGTAATCACTCATCGCATGTTCATGCACGAAGTAGCTAGCTTGATGCTTA
ATTACTTGTGTTATATTCATTAACCGGGCTGTCTGATCTTATCAATACATGTCTATTAGGTGCATGATTTCTGATTTGGT
A----TGATTTTGGAATTTGATTGGTTGATCGAGCAGGAAGATGCACGCTCGTCGTTGAACTACTCACTGCCGTCGTCGC
CGTCCTCCTCC---------------------------------------TTCC--------------------------
-------------ATCCAAATCTTGTGGTACGTGCAATTTTACTAAACCGAGGATTAAGTTCTTCACCAAGTGCATCTAG
TACTGTACTATACATGCTAGCAGTTGGTTTCACACTTACCAAAACGTTGCCTGATGTATGTTACCGGTAGGTAGGTTAAT
TTAGATGGCTCCCTAGATTAAAGATGCATGGTCATTCATTATGGATAGTTTGGTTGATTACACATAATACAGTGCTTTCT
CAATCTTATCACAAAGAGCCATGCTATCG-TATGATCTTTTCTGCACAATTTTCTTCTTCTGCTAC---TCATCAGACCA
TTCACATGCTAGTGCAAATTGCGGGCAACCATCCGATTTTGTGTTGTGCTTGAGTCATATCGTACGTGCAGTTGTTTCGT
ATGACAAATGTAAGTGGGGTTTGATCATCGACACGGTCTCGTAGGTGAAATCAATTTATATGAACATATTCCTTTCAGAT
AAAAATATTTATTCACTACAGAAATCCAGAGATGAGTGAATGGCAGCTGTTTATTAACATCAATATATGTTATATACCAT
TGTACTGGATTCATCGAAATCTTTT--GGTATATGCAATTTTACTGAACTGGGAATTAAATTCGTCACTAAGTGTATCAA
TTAAGTACTTTATATAGATGCTAAGATTTGATTTCATATTACCAAAATATTGCTCAGTTAATCATTGTTATCGCCTTAAT
CCGTGGC--TGCGTTAATGATTATTGTCCATTCATTTTTGATAATTTAGTTGACTAAACAAAATTTAGTAACAAAAAAAA
TCAGCGATCACCCCACAAGATCAGGAAAAGTTGGACAGAAAATCTATCTTAATTATGTAAATTTCCCTTTAATTTTTGTT
CTGACGCTTTAAATCGTCCCAGCAATACTTTTCTAGTAGTACCATGTGCTAGCTGTATCAATAATGCACCATAATATGAT
ACACTATGTTAGAACCTTTTTGTATATGTATACGTGTGAATCCGCGGGGAAGAACAAGAGTATCATTGCAACCAAAGATC
AGATTTTATTCTCCCATGCACGTGATAGCCTTATCATCATGCATCCTGCATATCTTATGCCCGGTATGTGCTGCCTAACC
AGACATGCATGTGTATTGTAACATACATAGATGGCCTATAATGGATGGAGATCAGGAGACATGAGATATGGCGAATCCCC
AACTGCTCCCATCATCAGGTATCTATTAGTACTAGCCTGTGTCCAATGCAAGGTCCACGTACGATCTAAACTGCAAATGT
CCCAGACAGAATTAATTAATATTATTATTCTCTCATATAATTAACCTTCAGATCAGGGTTGAATTACCATGGAGCAACTA
CCTATGGTACAACACATTACCCTCATCCGGGTAGCGATCACACGTTACCTCTCTTCGAACCCAAGGTCGGTGGGTATGCA
GAAGTGTATTTATACGATCATGGATAATCGAACTGTTAAAAATGATGCATGCTGCACCAAAATTTACATCCAAAATCATG
AAGTATAT-----------------------AAGGATGAGCTAGATATACACACATGCATGAGATACTTTTTGTTGCTCC
CTACATAATCTTAATCTAATTTCACAAATATTCATCTGGTAGTTTTTGGAAAAAATCATATACCCTTCTTTACTCAGCAC
TATATATCTGTGCCTTTTTAATTGTTTTTCCTACTCCTAAGTACTCTC-GAGTTTATTTGGTATACATGAGATTTTTGTT
AGTGTTTTGTATGTAAAGTTTATTTTTTGGGATTGCTTGGGGGT-------------GGGGGTA----------------
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----------------------------------------------------------ATACAATGTGTTAATGCATTTG
CTTTCAAGATGTGTGTGT--CATC---------------------TATTTCTTTTGAATAATGCTTTAAATGTAACATCA
ATTCTCTGATGGTTGACATATG-GGGCTTAAAGTTTTGTTGTGCTAATTGTAGTGCACGTTTGATTCAATATACACTAGT
ATTTCTTGAGATGCAACATGTCTTGTCCAGTTTCCTTCATCGCCAATAATATTGAAGATATGTAAGAAAATGCTATAAGA
AACTACACTTGTATTTGTAGAAAGTACCACTTG-TTTTTGTTTCGGTTATGTCAGTCCAACA-----TGCTTGAGCGCAC
GGTTTACTGACATGGTACTGC--AAACCAGTTCCTAGATTTTTCTTTTTGCTGCTAAATATCTATATG-TGCAATGTGAT
GATGTACTTAAAGCCAGTCCAACAATGTGCCATCTTA---------------TGTCCATTATAGAGTTTACTCCGATCCA
ATCAAAATTTACATTTGCTCATAAATAAGCTGTTAATTGTTGTGAAAAAAAATATGTTGACTCCATTTGTTTCATGTGAC
AGCTGGACCTAAATCAAATGGCGACAGTAGACTCATCGTCGGCGAGTACGAACCTGGATGATGTGGACCTTGAGCTGAAG
CTATGATACCACCTTGTTAAACATG---TCCATGCTCGTGGCATATGCATCGATATGATGCCACACGAAC----------
-----CGCGGTGTGTTTAATTCTCATGCATATATTGGATTGCGATTGATTTGGTGATGGATGCTGGCTAGCTAGCTAGTT
AATTTGTACAGACATAAGCACACTACGGCCATGGATTTCAGA-----------------------ATATATATGGCAGCT
GGTCTGCCTAGGCCACTGATCCTGCTGCCTTTTGCACCTAGCTAGTGTTGTATGATGACAAGGTACGTATATTCTGGTGC
AGTACTTTGGGCGTCGATTGTTCTCGATATTAATATTGCTGGTGGTGTTAATATCGTA----AGGATGCGTAGGAGAACT
CCTGGCTCAAAAAGGTGTTTTTACATTGC--------------------------------TTGCATGCTGCTAGGAAGC
ACTTTACATCATGTG-----TCCGATTTTTTTTTTTGATTTTTTTGAGGGGTGATAAACAACTTTATGGAACGCCAAACC
AGACGTGACAACCAGGACCTCTAGAAAGAATTTTTTTTGCTAAACTATGTGCTTCATAATTCGTAACACGACACTCAAAA
ATAATTTTACACTGGACATTAGCAGTTCTAAAGTGAATCTCGCTGATAATTGCTCCATATCTTCCTCTAGCATTGTGGCC
AATGTCTGCCACAACCTGTTTGCAGTCTGATGCTATGACGGAGTTGTGGATATTCATGTCTTCCGCCAAGCACAACGCCT
CACAGCATGCTATCGCTTCCAAAGACGCAGGGTCAGTGACACCCTCCAAAACCAACGCCGAGGCCCCAATATATATATGT
GGTATCTGATATTAT-------------------------------------------------------------CTTT
TGACCTTTTCTAAGCCCATTGCATGCATGAACTTATGTATGTGCACAAACGCGTACGAGAGCTAATGTACTTCCTCTGTT
CATGTGTATAGGGCATGCATATAATTCTAGGACATCAATTTGACTAACTAAATATGCGTATATGTCATCAAAAGCATATC
ATTGGATTCGTATGCAGACATAGTTTCTA
>chr1D_4
---CTTTTCTCGATGTGATTTTGTTGACTTCTCATTATGGTGGGGGCTGCGGTCGATATATATGTGTACAAAACAGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNATCACATGCTTACGTTTCTGATGGCGGAAGGGCTGAAGTTGGGAGGAGCACCAGCGAT
CGCGATATGTAAAAGTAAACTTTTTATCGACAATTTCTTCCATGTTATTTTAGGCATATACTAGTGTTACTAGGAATTAT
GGGCCCTCGGCCCATATGAATAATATTTCCTGTAAAATCTCATAGGCTCCTCTTGGATGTGTGACATGTGTG--CAAAAT
TAGTCTCATGTTGCTAGTGGATATGAGAGAGTACAACAAGATATAAATAAGCAGTATAATATATTCTTAGAATTTGCAAC
AAGGCTAGATATGCCATGCTGAAGACACTATTATGGTAGAATCACTAGTGACGAGTCCAAAAGAAATCGATCGTTAGCTC
TATAGGAATTCCCCAATTCTATCCATGTTGTTTGATGTGAGTGGTAGGTCGACCATCGTGCGGCGAGCTTCCCCAATTTT
AATTTATAATAGT-------------------------------------------------------------------
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>chr1A_4
---CTTTTCTCGATGTGATTTTGTTGACTTTTCATTATGGTGGGGGCTGCGGTCGATATATATGTGTACAAAACAGAAAT
CCC-TCCAATG---------------------------------------------------------------------
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----------------------ATCACATGCTTGCGTTTCTGATGGCGGAAGGGCTGACGTTGGGAGGAGCACCACCGGT
CGCGATATGTAAAAGTAAACTCTTTATTGACAATTTCTTCCATGCCATTTTAGGCATATACTAGTGTTACTAGGAATTAT
GGGCCCTCGGCCCATATGAATAATATTTCCTGTAAAATCGCATAGGCTCCTCTTGGATGTATGACATGTGTGTGCAAAAT
TAGCCTCATGTTGCTAGTGGATATGAGAGAGTACAACAAGATATAAATAGGCAGTATAATATATTTTTAGAATTTGCAAA
AAGGCTAGATATGCCATGCTGAAGACACTATTA---------------------------AAGAAATCGATCGTTAGCTC
TATAGGAATTCCCCAATTCTATCCATGTTGTTTGATATGAGTGATAGGTCGATCATCGTGCAGTGAGCTTCCCCAATTTT
AATCTATAATAGTGACTACAGGAATTTGCAATTTTTTGGTATATGTCCGCCATATTCGGCTCATAGCCTGGGGCGGCACA
TGAACAATATATCGTTCTGTGCCCTAAAATTATCTTTTGGTTGTCTATAAATACGAGAAATGGGGTAGCTCAATTTGATA
TTACACATGTTTTTTTTAGGGTTGATGTTACACATATTGGTTGTTGTGAGACTTGTGTGTGGGTAGGTTGTAGCGGTGCA
TCCATGTTTTTCGTTGTCTGTGGTGTGCTCTTGTGGTGGCGAGCTTCCCCAATGTTAGCCACTTGGTGATGGCTTTTTTT
GCTGTTTTCACATCGGAGCCTTGGGATGCACACAAAGAAAATATGGTTGTATGCAATGGTATGATCCTCCAATCGTCTAA
AGTAGTGGAAATTGAACTACTTAAGACTTGGATTTTAATTAGGGGATTGTCTCTGATCTGAACTCCTTTTGACTCTTCTT
TCATTAATGTGGTTTGGGTCACATGGTACCAATCGATTGCATAAACTAGCACATCAAGGCCATGGCACTATATATAGCTA
TCTTAACATAAATAATGAAATCAAGCTTTCGTTTAGGCAGCCTGGAGTCTCCATTTAATAATTAAGAGGGATCGATACTG
GGCGTGCAAGGCGATCTCTCCCTTTCACTTTAAGTGGCCGGCCCTCTCGACACCACCCAGCTTCCCCTTTTCCTCCACCT
CCTTTTCCTGCCCCCATTTCTGGGTCGTCTCCTACCTAGGTCTTGTCTGTTGGTAGCTATACCTGGGTACGATCCCATGA
GGCCATGAGTGCAAGCAACTTTGGGGACAGCATGGAGTGGGGCAGGGGGAGATCCTCCTCCTCGTCGTCGGGGTCGGGAT
CGGGGTCCAGGAGGGGCAAGAGAGCTGCCGCCGTCGACAAGCCGAGGCAGCCGCAGCGGGGCCTCGGCGTTGCGCAGCTT
GAGAAGATCAGGTTGGAGGCCGAAATGGCCGCGTACCAGAACCACCCTCCTCTCGTCGGACAGCCACCTCCGTCGTCGTC
GATCCACGGAACCGGTAGCTTCAACCTGCAGGTAATTACTCATCGCATGTTCATGCACGAAGTAGCTAGCTTGATGCTTA
ATTACTTGTGTTATGTCCATTAACCGGGGTGTCTGATCTCGTCAAGACATGTCTATTAGGTGCATAGTTTCTGATTTGGT
A----TGATTTGAGGATTTGATTGGTTGATCGAGCAGGAAGATGCACGGTCGTCGTTGAACTACTCACTGCCGTCTTCGC
CGTCCTCCTCC---------------------------------------TTCCATGCTAACAACACCAACGTTTCATCG
ACCTACCCGTTCTATCCAAATCTTATGGTATGTGCAATTTTACTCAACTGAGGATTAAGTTCTTCACCAAGTGCATCTAG
TACTGTACTATACATGCTAGCAGTTGGTTTCACACTTACCAAAACGTTGCCTGATGTATGTTACCGGTAGGTAGGTTAAT
TTAGATGGCTCCCTAGATTAAAGATGCATGTTCATTCATTTTGGATAGTTTGGTTGATTACACATAATACAGTGCTTCCT
CAATCTTATCACAAAGAGCCATGCTATACATATGATCTTTTCCGCACAATTTTCTTCC---GCTAC---TCATCAGACCG
TTCAAATGCTAGTGCAAATTGCGGGCAACCATCCGATTTTGTGTCGTACTTGAATCGTATCGTACGTGCAGTTGTTTTGT
ATGACAAATGTAAGTGTGGTTTGATCATCGACACAGTCTCGTAGGTGAAATCAATTTATATGGACATATTTCTTTCAGAT
AAATTTATTTATTCACCACAGAAGTCCAGAGATGAGTGAATGGCTGCTGTTTATTAACATCAATATATGTTATATACCAT
TGTACCGGACTCAACGAAATCTTCT--GGTATATACAATTTTTCTGAACTGGGAGTTAAATTCGTCACCAAGTGTATCAA
CCAAGTACTTCATATAGATGCTAAGATTCGATTTCATATTAACAGAATATTGCTCGGTTAATCATTGTTATCGCCTTAAT
CCATGGC--TACGTTAATG---ATTGTCCATTCATTTTTGATAATTTAGTTGACTAAACACAATTTAGTAAC-AAAAAAA
TCAGCGATCACCCAACAAGATCGGGAAAAGTTGGACAGAAAATCTATATTAATTATGTAAATTTCCCTTTAATTTTTGTT
CTGACGCTTTAAACCGTCCCAGCAATACTTTTCTAGTAGTAGCATGTGCTAGCTGTATCAATAATGCACGATAATATGAT
ACACTATGTTAGAACCTTTTTGTATATGTATACGTGTGAATCCGCAGGGAAGAACAAGAGTATCATTGCAACCAAAGATC
AGATTTTATTCTCCCATGCACGTGATAGCCTTATCATCATGCATCCTGCATATCTTATGCCCGGTGTGTGCTGCCTAACC
AGACATGCATGTGTATTGTAACATACATAGATGGCCTATAATGGATGGAGATCAGGAGACATGAGATATGGCGAATCCCC
AACTACTCCCATCATCAGGTATCTATTAGTACTAGCCTGTGTCCAATGCAAGGTC-ACGTACGATCTAAACTGCAAATGC
CCCAAACAGAATTAATT-ATATGATTAATCGTTCATCTATTTAACCTTCAGATCAGCGTCGAATTACCATGGAGCAACTA
CCTATGGTGCAACACATTACCCTCATTCGGGTAGCGACCACACTTTGCCTCTCTTCGAACCTGAGGTCGGTGGGTATACG
GAAGTATATTTATACCGTCATGGATAATATATCT-----AAATGATGCATGCTGCACCAGAATTTACATCGAAAATCATG
AAGTATATCTATATTGTCATACCAATATAAAAAGCATGAGTTAGATATATG--CATGCATGAGATACTTTTTGTTGCTCC
TTACGTAATCTTCAACTAATTTCGTAAATATTCACCTAATTGGTTTTGG-ACAAATAATATACCATTCTTTACTCAACAC
AATGTATCTGTAGCCTCTTAAATGTTTTTCCCACTCCTAATTGCCCTCTGAGTTTATTTGGTATACATCAGATTTTTGTG
CGTGCTTTGTATGTACCTGTACAGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGATGTGTTCATGCATTTG
ATTTCAACATGTGTGTGT--CATCTACTCCTTGGGATGGAGGGAGTATTTCTTTTGAATAAAGTTTTAAATCTAACGTCA
ATTCTCTGATGGTTGACATATGCGGGCTTAAAGTTTCCTCGTGC-A--TGTAGTATATGTTTGATTCAATATACAATAGT
CTTTCTTGAGATGCAAAATGTCTTATCCAGTTTCCTTCAACGTCAATAATATTGAAGATAGGTAAGAAAATGCCATAAGA
AATTACACTTCTATTTGTCGAAAGTACCACTTGCTTTATGTTCCGGTTATGTTCGTCCAAACATGCTTGCATGAGTGCAC
GGTT-ACTGGCATGGTATTAAATAAACCAGTCCCTAGATTT---TTT--GCTGCTAAATGTG-------------GTGAT
GATGTCCTTAAACCCAGTCCAACACATGAC-------------------------CCTTTGTGGAATTTACTCAGATACA
ATC-AAATTTACATTTGCTCACATACAAGCTGTTAATTGTTGTGAAA-ATT-TATATTGACTCCATTTGTTTCATGGGAC
AGCTAGACCTAAATCAAATGGCGACAGTAGACTCATCGTCGGCGAGTACGAACCTGGATGATGTGGACCTTGAGCTCAAG
CTATGATCCCACCTGGTTAAACATG---TGCATGCTCCTTGCATATTAATGGATATGATGCCACACGAAGCGGAGAGCTT
TGTCGCGCGGTGTGTTTAATTCTCATGCATATATTGGATTGTGATTGATTTGGCGATGGATGCTGGCTAGCTAGCTAGTT
AATTTGTACAGACATAAGCACACTACGGCCATGGGTTTCAGAATATATGGCGCAGAATCACAAGGATATATAGGGCAGCT
GGTCTACCTAGGCCACTGATCCCGCTGCCTTTTGCACCTAGCTATTGTTGTATGATGACAAGGTACGTATATTCTGGTGC
AGTACTATGGGCGTCGATTGTTCTCGATCTTAATATTGCTGGTGATCTTAATATCGTA----ATCATGCTAAGGAGCACT
CCTGGCTCAAAAAGGTCTTTCGTTGTTTGAAAAAAAATTCCCTATGAAATCATGTGGAAATTTGCATGCTGCTAGGAAGC
ACTTTACATGC---ATATGCTCCGATGTTCTT------------------------------------------------
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>chr1D_564
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-----------------------------------------------TGTATGCAATCGTATGATCCTCCAATTGTCTAA
ACTAGTGGAAATTGTACTACTTAAGACTTGGATTTTAGTTAGGGGATTGTCTCTGATCTGAACCCCTTTTGACTCTTCTT
TGGTTAATGTGGTCTGGGTCACATGGTACCGATCGATTGCATAAACTAACACATCAAGGCCATGGCACTATATATAGCTA
TCTTAACATAAATAATGAAATCAAGCTTTCGTTTAGGCAGGCTGGAGTCTCCATTTAATAATTAAGAGGGATCGATACTG
GGCGTGCAAGGCGATCTCTCCCTTTCACTTTAAGTGGCCGGCCCTCTCGACACCACCCAGCTTCTCCTTTTCCTCCACCT
CCTTTTCTTGCCCCCATTTCTGAGTCGTCTCCTACCTAGGTCTTGTCTGTTGGTAGCTATACCTGGGTACAATCCCATGA
GGCCATGAGTGCAAGCAACTTTGGGGACAGCATGGAGTGGGGCAGGGGGAGATCCTCCTCCTCATCGTCGGGGTCGGGGT
CGGGGTCCAGGAGGGGCAAGAGAGCCGCCGCCGTCGACAAGCCGAGGCAGCCGCAGCGGGGCCTCGGCGTCGCGCAGCTT
GAGAAGATCAGGCTGGAGGCCGAAATGGCCGCGTACCAGCACCACCCTCCTCTCGTCGGACAGCCACCTCCGTCGTCGTT
GATCCACGGAACCGGTAGCTTCAACCTGCAGGTAATTACTCATCGCATGTTCATGCACGAAGTAGCTAGCTTGATGCTTA
ATTACTTGTGTTATGTTCATTAACGGGGGTGTCTGATCTTGTCAAGACATGTCTATTAGGTGCATGATTTCTGATTTGGT
ATATATGATTTTGGAATTTGATTGGTTGATCGAGCAGGAAGATGCACGGTCGTCGTTGAACTACTCACTGCCGTCTTCGC
CGTCCTCCTCCTTCCATGCTAACAACACCAACGTTTCATCTACCTACCCGTTCC--------------------------
-------------ATCCAAATCTTGTGGTATGTGCAATTTTACTCAACTGAGGATTAAGTTCTTCACCAAGTGCATCCA-
----GTACTATACATGCTAGCAGTTGGTTTCACACTTACCAAAACGTTGCCTTTTGTATGTTACCGGTAGGTAGGTTAAT
TAAGATAGCGCCCTAGATTAAAGATGCATGTTCACTCAT-ATGGATAGTTTGGTTGATTACACATAATACACTGCTTCCT
CTATCTTATCACAAAGAGCCATGCTATACATACGATCTTTTCTGTACAATTTTCGTGCGACGCTACTCATCATCAGACTA
TTCACATGCTGGTGCAAATTGCGGGGCACCATCCGATTTTGTGTCGTGCTTGAAACTTATCGTACATGCAGTTGTTATGT
ATCACAAATGTAAGTTTGGTTTGATCATCGACACAATCTCATAGGTGAAATCAATTTATATGAACATATTTCACTA----
-------------------AGAAATCCTGAGATGAGTGGACGGCTGCTGTT-ATTAACATCTATACAG----TACACTAT
TGTACCAGATTCATCGAAATCTTGTGGGGTATATGCATTTTTACTGAACTGGGAATTAAATTCATCTCTAAGTGTATCAA
TTAAGTACTTTATAGAGATGCTAAGATTTTATTCCATAAGG---AAATATTGCTCGGTTAATCATTGTTATCGCCATATT
CCATGGCCATAGGTTAATC---GTTGTCCA-TCATTTTCGATAATTTAGTTGACTAAACACAATTTAGTAAC-AAAAAAA
TCAGCGATCACCCCACAAGATCGGGAAAAGTTGGACAGAAAATCTATCTTAATTATATAAATTTTCCTTTAATTTTTGTT
CTCACGCTTTAAATCGTCCCAGCAATACTTTTCTAGTAGTAGCATGTGCTAGCTGTATCAATAATGCACGATAATATGAT
ACACTATGTTAGAACCTTTTTGTATATGTATACGTGTGAATCCGCAGGGAAGAACAAGAGTATCATTGCAACCAAAGATC
AGATTTTATTCTCCCATGCACGTGATAGCCTTATCATCATGCATCCTGCATATCTTATGTCCGGTATGTGCTGCCTAACC
AGACATGCATGTGTATTGTAACATACATAGATGGCCTATAATGGATGGAGATCAGGAGAGATGAGATATGGCGAATCGCC
AACTGCTCCCATCACCAGGTATCTATTAGTATTAGCCTGTGTCCAATGCAAGGTCCACGTACGATCTAAACTGCAAATGT
CCCAGACAGAATTAATTAATATTATTAATCTCTCGTATAATTAACCTTCAGATCAGCGTCAAATTATCATGGAGCAACTA
CCTATGGTACAACACATTACCCTCATCCGGGTAGCGATCACACGTTGCCTCTCTTCGAGCCCAAGGTCGGTGGGTATGCA
GAAGTGTATTTATACGATCATGGGTAATCTAACTGTTAAAAATGATGCATGATGCACCAAAATTTACATCCAAAATCATG
AAGTATAT-----------------------AAGGATGAGTTAGATATACACACATGCATGAGATACCTTTTGTTGCTCT
GTACATAATCTTAATCTAATTTCACAAATATTCACCTGGTGGTTTTTGG-AAAAATCGTATAACCTTCTTTACTCAACAC
TATATATCTGTAGCCTCTTAGTTGTTTTTCCTACTCCTAATTAATCTCTGAGTTTATTTGGTATACATGAGATTTTTCTT
AGTGTTTTGTATGTAAAGTTTATTTTTCGAGATTGCTTGGGGTTGGGGGTGGGGGTGGGGGGTA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------ATACAATGTGTTAATGCATTTG
CTTTCAAGATGTGTGTGTGTCATC---------------------TATTTCTTTTGAATAATGCTTTAAATCTAACATCA
ATTCTCTGATGGTTGACATATG-GGGCTTAATGTTTTCTTGTGC-AATTGTAGTACACGTATGATTCAATATACACTAGT
ATTTCTTGAGATGCAACATGGCTTGTCCAGTTTCCTTCATCATCAATAATGTTGAAGATATGTAAGAAAATGCTATAAGA
AACTACACTTGTATTTGTAGAAAGTACCACTTG-TTTTTGTTTCGGTTATGTCAGTCCAACA-----TGCTTGAGCGCAC
GGTTTACTGACATGGTACTAC--AAACCTGTCCCTAGATTT---TTTTTGCTGCTAAATATCTATATGGTGCAATGTGAT
GATGCCCTTAAAGCCAGTGCAACAATGTGCCATCTTATTTTTGCAAACACATTGTCCATTGTAGAGTTTACTCCGATACA
ATG-AAATTTACATTTGCTCTTAAATAAGCTGTTAATTGTTGTGAAA-AACATATGTTGACTCCATTT-TTTCATGTGAC
AGCTAGACCTAAATCAAATGGCGACAGTAGACTCATCGTCGGCGAGTACGAACCTGGATGATGTGGACCTTGAGCTGAAG
CTATGATCCCACCTGGTTAAACATGATGTCCATGCTCCTGGCATATTCATCTATATGATGCCACACGAAC----------
-----CGCGGTGTGTTTAATTCTCATGCATATATTGGATTGTGATTGATTTGGTGATGGATGCTGGCTAGCTAGCTAGTT
AATTTGTACAGACATAAGCGCACTATGGCCATGGATTTCAGAATATATAAATGTTTCTGACG------------------
-------------CACTGATCCGGCTGCCTTTTGCACCTAGCTTCTGTTGTATAATGACAAGGTACGTATATTCTGGTGC
AGTACATTGGGCGCCGATTGTTCTCCATATT-ATATTGCTGGTGGTCTTAATATCGTATATAAGGATGCGTAGGAGCACT
CCTGGCTCAAAAAAGTGTTTTTTCATTGC--------------------------------TTGCATGCTGCTAGGAAGC
ACTTTACATGTATGATGTGCTCCGATTTTTTTTTGATGAATAACCGTACGTGGTATAC----------------------
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-------------------------------------------------------------------------------T
GGTATCTGATATTATCTTTTTTTTTCATTGTTTTTGATATAGCTTACCACTCATGCCAAGTGGTATATGATATTATCTTT
TGACCTTTTCTAAGCCCATTGCATGCATGAACTTATACACAAA--------CGTACGAGAACTAATGTACTTCCTGTGTT
AGGGTGTATAGGGCATGCATATAATTCTAGGTCATCAATTTGACTAACTATATACGTGTATATGTCAGCAAAAGTATATC
ATTGGATTCGTATGCGGACGTAGTTTCTA
>SNPs
SSS----S----------------------------S--------S----------------------------S-----
---S----------------------------------------------------------------------------
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------------------------------------------------------------------------S-------
----------------------------S---------------------------------------------------
---------------------------------------S----------------------------------------
-S--------------S---------------------------------------------------------------
----------------S------S--------------------------------------S-----------------
----------------S------------------------S----------S-------S---------------S---
----------S--SSS----------------------------------------------------------------
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-----------------------------------------------S--------------------------------
----------------------------S------------------------S--------------------------
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---S-----------------------------------------------------------S----------------
----------------------------------S--------------S------------------------------
---------------S---------------S------------------------------------------------
------------------------------------S-------------------------------------------
--------------S-------------S-----------S----S----------------------------------
------------------------------------------------S--------------------------S----
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------------------------------S-------------S---S-------------------------------
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------------------------------S----------------------------------------------S--
---------------------------SS----------------------------SSSS-------------------
--------------------------------------------S--------S--S--------------------S--
----------------S-----------------S-----------------------------------S---------
---SS-----------S---------------------------S-----------------------------------
-----S-----------------S--------------------------------------------------------
-----------------------------------------S-------------S------------------------
--S-------S--------SSS--------------------------------------S-----------S-------
----------------------S---------------------------------------------------------
-----------------------------------------S---------------------------S----------
---------------------------------------------S----------------------------------
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---------------------------S----------------------------S--S--------------------
----------------------------------------------S---------------------------------
-----------------------------S--------------------------------------------------
----------------------------------------S---------------------------------------
S---------------------------------S-----S--------S--------------------------S---
-----------SS-S-S-----------------------S---------------------------------------
---------------------------S-S------------S-------------------------------------
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-----------------------------------------------------------------------S--------
-------------------------------------S------S---------S-------------------------
------------------------------------------S-------------------------------------
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-------------------S-----------S---------SSS------------------------------------
-----S------------------------------------------------------S----------------S--
---S-------------------------------------------S--S-----------------------------
----S---------------------------------------------------------------------------
-------S------S----------------------S--------S---------------------------------
-----------------------------------------S--------------------------------------
------------------------------------------------------------------------S-------
-----S----------------S---------------------S-----------------------------------
----------------------------------------------S-----------------------------S---
----------------------S---------------------------------------------------------
---------SSSSSS-------------------SSSSSS-SSSS-SSS-SS-SSS-SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
--------------------------------------------------------------------------------
------------------------------------SS-SSSSSSSSSSSS---------S--------------S----
SSS----------------------------S------------------S---S-S----------S------S-----
---------------S---S---------
>forward_701
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-----------------------------------------GGGTAGGTCGAACATCGTGT-------------------
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>reverse_2497
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----------------GGGTTTGATCATCGACACGG--------------------------------------------
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>forward_1996
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--------------------------------------------------------TGAACTACTCACTGCCGTCG----
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>reverse_3487
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----------------------------------------------ACCTCTCTTCGAACCCAAGG--------------
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>forward_2903
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---GCGATCACCCCACAAGATCA---------------------------------------------------------
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>reverse_5446
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-----GCCTAGGCCACTGATCCTG--------------------------------------------------------
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-----------------------------
