>input_sequence_26600
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--------------------------------------------CTAATTAACGTTGTGCTGAAATAAATCAGTCAAAAT
CAATGGCAGGTCTTAATACCTTGCGGCAACTGGTGGGACTCTTGCCGGAGGTTGCCGACCGCCGAGCTACCCCTGTTCCC
TTCCGGAACAAGGCGCTGAACACGATCACGTCGGTCCTCGTCTTCTTGGCCGGCAGCCGGTTGCCGCTGTATGGGCTCTC
GACCACCGCGTCTCCGGACCCCTTTTACTGGATCCACGCGGCTAGCGCCTCCAACGGCGGCACTGTCATGGCTCAAGGGG
TATACCACTTGCTGGTATCCGAGCTGGTCATCCACCCCTTGTTCGGACTGAAGATTGTCAGGGACAAGATTCCCATGGAA
GAACGCATGCAGTTCATGTAAGTCGTCCCTTAT---TTTTCACTTCTTCTTTTAGGGTTTCAACTTTCAAAGTACACCTT
GACCATTGTACTTATCCTTTTGTAC-------------------------------------GTACGGGTGATGAGTAGT
AAAA--------------------------------------GTATGTATTGGGACTGGTCGTTTACTCCCGACTGGTTG
ACTCTCA------------------TGTGTAATTAATTTCAAGTTTTTAACATATGCAGGGATAGGTCCCAGAAGTTACT
GGGCATACTGTTAGCCATGGTGTCTGCAGTTTGCAATGTGTTTTCCGCGGGGCAACTCGGTCCGGTGAATGCGACTCTGA
TCGCGCTCCAGCTTTCTGCTGGAGGTGCCATTGTCATTTACCTTGATGAGGCCCTTAAAAAGGGGCACGGACTGGTATCT
AGTGGCATTGCTCTCTTCACTGCCACCAACATCTGGTAATTAAG------AATAACCATGCATAAAAATTCTTTTTATCC
GCGCGCATACTAATATTCATAAATAAGTATTGAGCCAGCTAGCTAAGTTGTGCGTTTATTATATTTGTAGCGCGTGTTTC
CTGGAGACAT------------------ATGGAGGAGAC---------AAGATCGTCATTCCTGCTGGCACGTGTGCATT
CCTGGCGCTCACGGTGAGACTACAAGGCTTGCATCTCCCATTGGCAGTGAGGACACATGGTGTTGACCCTGCGTTGCAAG
CCAACTGCAGCGTGAACCTATCCTACCTCTCCTACATGCCCATCGTGTTTCAGGGTGCCATTGCTTCAAGCATGTATTTC
ATCTCACAGGTAGGTAGTTCTAACTAAAAATAAACTCCATCCATTCTTATATTATTTCTCCGGAGTGTATAATTACTAGC
TAGCTATACCTTTGCAGCTGTTATACTTGCAATACGGCGAAAATAATAATGGAGTGGTCAAGCTCCTCGGCAGTTGGAAG
CGGGATAGTCGGTACCCTGGACAACTTATTCCCATCGGCGGGGTCGCACACTACGTAACCAATCCACCAGCGTGAGTACA
TATGCATCAACAAAATAAA--TACGAATCATTATTCTTTACTTGCATCTTCTACGAAATCTTGGCGTGGTACTATGTTTA
TTTATAGCTTGT--------------------------------------------------------------------
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--------------------------------TAAAGAAGTTTATTGATTCATGCACGCACGCTGCAGCTGGGCTGACTT
AGCAAGAGACCCTGTCCATGTGACACTCTATGCCGTCTTGCTGCTGATGGCATGCGCTCTTATCTCGGCAACATGGTTTG
GTGTTCGTGTATATTCGAGAAAATATGTGGCCAGGTTGCTCGGGGTACGTTTTTT--TCTTTAATTTACACTTCTCTTCC
TGCATATATGTGTATATCAAGATGGCAATGGGGCCCCGAAACCCGCGTCCCCACGGGTTTTTACCCTATTAGGGGACGGG
GATGGAAGTCTTTTCATCCCCGCGGGGCTGTTATTGGGCACATTATACAACCCGACACGTTTCGTGAGTTTGCACCCGTT
TCAATAGTCCCCGAACCCGAAGCCAGGTAAACCCGGCAAAATACATTTTTTACCAAGCATTTTCTTTACATATCATCATA
AAGTTTATCATTATCTTGCTGCAATGTTTCATAAGATGTTCATTACTACTTATTTGATTCTCATATGTAATTGCATATCT
TGTTGAACCATGTATGGCTGAAATTTGCTCATCTTTGTTGCTGAAATGTGGTATCATGCCGTTGAAATACATTCTATATA
GCTGTTGAACCATCTACTATTATTTTTTGTTGAAATTTGCTCAAGTTATGATGCTGAGATGTGCTTGTTTTGCTGCTGAA
ATGTTATTCTTTGTCGCCACTATGTTTGTTTGAATATTTTGATTTTCTCGTGGGTTCCCCGTGGGTTCCCCGAAACCCGA
TGGGTTTAGGGGACGGGCAGAAAACTAGCCCCGCGCATGGTGATGGGGACGGGGATGGGTTTACGATTTTCTCGTGGGGA
TGGGTTTGGGAAGGCAAAACCCGATGGGTTTCGTCCCCGTTGCCATCTTGATGTGTATACCTTTCAACTTCTGATTGTCA
AGAACCTAACTAACTGCTTGTTTGGCTACGTGCATGCAGAGGCAAATACCTGTGACGCCTGCTCAGCCCGGCTCCATTCC
CATGACCCGATGGAAGCGTCATGTTGCCATGATAGCACTTCTCGTCGGGCTTTGCGTCGGTGCGCTGACTCTCATGGCAG
GTTTCATATGTGTGCCTGGTTCCGGAACTGGAATTATGCTCGTCGTCACCGTCGTGTGTTCCTACTTTGAAAGGAGAACT
GGAGATCAGGCTGCTGATGTATTTCTGCCTCTAAGCGGACTAGCTCAGAATCAGTTCATTAGAG----------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ATGAAAAACAAGCA
GAATCATTTAAAATAATACTCTTTATTATAAGAGAGAAAATCAGCTCTTTATCCAAACATCTCCCAAACTTTGTGTCATA
CAAGTCGAAACACCATAATACTAAGAAAAATAAGTGAATATTTTTTTGAATAGTTTTTAGTGCTTACCACAATGTCACGT
TGTAAAAAGAAGTGAATGTTAAATGTAAGTCGAATAACAGCCAA------------------------------------
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------
>chr4A_1_TraesCS4A01G327500
CGTGTCCATATTCTTTTTTAATTTTCCATGGTCCTACGTGTATCATTGATATGATGAACACCATAGTGTAAGCCACGTAC
ATGCATGCTTGAAAAAAAAAGCCACCTACATACCGACCAGTCAAAACTGAAGCCACTTACATACCGACCTGTCAAAACTG
ATCGCATAACAAAACACTAGTCTCTGCACAAAGGAACACCAGCCAAGAACTAAAATTACAAAGATGACAGAAGAAACCCC
TGAGCTTGACAGCAACGCCCCTTACCTCCTCTAGCACCACCACAACAGCCACCAAAGAATAAAACGATGGATCACCTTCA
CACCCGAGTTCGACGCGGCGCCATCATTGATATGCAGTTTTGCGGATCTTCAAGGTGGCTCGCCAAAGGCGAAACCATGA
CCATTGAA------------------------------------------------------------------------
------------ACCATACCTGCCTTTCACGTACCATAAACCTTAGCACATAACCCATCATCTTTCAGATGTTGCCGATG
CTGATTAATTTGCATCCTCTACCGGAATACCTGTCAAACTGCATGTGCGCCACCGGTGGATCGAAATCTGTCGCAATGGC
AGAGCCCGATGAATCAGGTCCACCACGACGACGGCATCACCACCACCATCCTTGCTCGAACAGATGAGGGAATCCGACGA
CCGGCACATGGAGCCGATGACCCCCTTCATCACCGACGACCGACTAAACTAATTTGACCTAAAACTATACACACGCGGGG
GATCTGTCGACCCACCTCATCACCGACGACCGAGGTCGTTGGAGGAGGGGAGCCGTCGAAGAAACTCCCTGGCGACGGGG
GCTATCAAGATCGCCTCTTCCTTCGACAGGAAAAAAGAATTCTTTGCTTGTTTACCAGTCGAGGTTTGCACGTGTTAACA
GCCTAATCCCCGGTCCAACCACATCGACGCCCCGTGTGTATTTCCAGGCGGACTCGGTTTCAATTCCGCCGTTTGCCCGA
TCGATATATACGCCCCTACTCCCCTGCCAAAGAATCGATCTATTCTAATTAACGTTGTGCTGAAATAAATCAGTCAAAAT
CAATGGCAGGTCTTAATACCTTGCGGCAACTGGTGGGACTCTTGCCGGAGGTTGCCGACCGCCGAGCTACCCCTGTTCCC
TTCCGGAACAAGGCGCTGAACACGATCACGTCGGTCCTCGTCTTCTTGGCCGGCAGCCGGTTGCCGCTGTATGGGCTCTC
GACCACCGCGTCTCCGGACCCCTTTTACTGGATCCACGCGGCTAGCGCCTCCAACGGCGGCACTGTCATGGCTCAAGGGG
TATACCACTTGCTGGTATCCGAGCTGGTCATCCACCCCTTGTTCGGACTGAAGATTGTCAGGGACAAGATTCCCATGGAA
GAACGCATGCAGTTCATGTAAGTCGTCCCTTAT---TTTTCACTTCTTCTTTTAGGGTTTCAACTTTCAAAGTACACCTT
GACCATTGTACTTATCCTTTTGTAC-------------------------------------GTACGGGTGATGAGTAGT
AAAA--------------------------------------GTATGTATTGGGACTGGTCGTTTACTCCCGACTGGTTG
ACTCTCA------------------TGTGTAATTAATTTCAAGTTTTTAACATATGCAGGGATAGGTCCCAGAAGTTACT
GGGCATACTGTTAGCCATGGTGTCTGCAGTTTGCAATGTGTTTTCCGCGGGGCAACTCGGTCCGGTGAATGCGACTCTGA
TCGCGCTCCAGCTTTCTGCTGGAGGTGCCATTGTCATTTACCTTGATGAGGCCCTTAAAAAGGGGCACGGACTGGTATCT
AGTGGCATTGCTCTCTTCACTGCCACCAACATCTGGTAATTAAG------AATAACCATGCATAAAAATTCTTTTTATCC
GCGCGCATACTAATATTCATAAATAAGTATTGAGCCAGCTAGCTAAGTTGTGCGTTTATTATATTTGTAGCGCGTGTTTC
CTGGAGACAT------------------ATGGAGGAGAC---------AAGATCGTCATTCCTGCTGGCACGTGTGCATT
CCTGGCGCTCACGGTGAGACTACAAGGCTTGCATCTCCCATTGGCAGTGAGGACACATGGTGTTGACCCTGCGTTGCAAG
CCAACTGCAGCGTGAACCTATCCTACCTCTCCTACATGCCCATCGTGTTTCAGGGTGCCATTGCTTCAAGCATGTATTTC
ATCTCACAGGTAGGTAGTTCTAACTAAAAATAAACTCCATCCATTCTTATATTATTTCTCCGGAGTGTATAATTACTAGC
TAGCTATACCTTTGCAGCTGTTATACTTGCAATACGGCGAAAATAATAATGGAGTGGTCAAGCTCCTCGGCAGTTGGAAG
CGGGATAGTCGGTACCCTGGACAACTTATTCCCATCGGCGGGGTCGCACACTACGTAACCAATCCACCAGCGTGAGTACA
TATGCATCAACAAAATAAA--TACGAATCATTATTCTTTACTTGCATCTTCTACGAAATCTTGGCGTGGTACTATGTTTA
TTTATAGCTTGT--------------------------------------------------------------------
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--------------------------------TAAAGAAGTTTATTGATTCATGCACGCACGCTGCAGCTGGGCTGACTT
AGCAAGAGACCCTGTCCATGTGACACTCTATGCCGTCTTGCTGCTGATGGCATGCGCTCTTATCTCGGCAACATGGTTTG
GTGTTCGTGTATATTCGAGAAAATATGTGGCCAGGTTGCTCGGGGTACGTTTTTT--TCTTTAATTTACACTTCTCTTCC
TGCATATATGTGTATATCAAGATGGCAATGGGGCCCCGAAACCCGCGTCCCCACGGGTTTTTACCCTATTAGGGGACGGG
GATGGAAGTCTTTTCATCCCCGCGGGGCTGTTATTGGGCACATTATACAACCCGACACGTTTCGTGAGTTTGCACCCGTT
TCAATAGTCCCCGAACCCGAAGCCAGGTAAACCCGGCAAAATACATTTTTTACCAAGCATTTTCTTTACATATCATCATA
AAGTTTATCATTATCTTGCTGCAATGTTTCATAAGATGTTCATTACTACTTATTTGATTCTCATATGTAATTGCATATCT
TGTTGAACCATGTATGGCTGAAATTTGCTCATCTTTGTTGCTGAAATGTGGTATCATGCCGTTGAAATACATTCTATATA
GCTGTTGAACCATCTACTATTATTTTTTGTTGAAATTTGCTCAAGTTATGATGCTGAGATGTGCTTGTTTTGCTGCTGAA
ATGTTATTCTTTGTCGCCACTATGTTTGTTTGAATATTTTGATTTTCTCGTGGGTTCCCCGTGGGTTCCCCGAAACCCGA
TGGGTTTAGGGGACGGGCAGAAAACTAGCCCCGCGCATGGTGATGGGGACGGGGATGGGTTTACGATTTTCTCGTGGGGA
TGGGTTTGGGAAGGCAAAACCCGATGGGTTTCGTCCCCGTTGCCATCTTGATGTGTATACCTTTCAACTTCTGATTGTCA
AGAACCTAACTAACTGCTTGTTTGGCTACGTGCATGCAGAGGCAAATACCTGTGACGCCTGCTCAGCCCGGCTCCATTCC
CATGACCCGATGGAAGCGTCATGTTGCCATGATAGCACTTCTCGTCGGGCTTTGCGTCGGTGCGCTGACTCTCATGGCAG
GTTTCATATGTGTGCCTGGTTCCGGAACTGGAATTATGCTCGTCGTCACCGTCGTGTGTTCCTACTTTGAAAGGAGAACT
GGAGATCAGGCTGCTGATGTATTTCTGCCTCTAAGCGGACTAGCTCAGAATCAGTTCATTAGAG----------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ATGAAAAACAAGCA
GAATCATTTAAAATAATACTCTTTATTATAAGAGAGAAAATCAGCTCTTTATCCAAACATCTCCCAAACTTTGTGTCATA
CAAGTCGAAACACCATAATACTAAGAAAAATAAGTGAATATTTTTTTGAATAGTTTTTAGTGCTTACCACAATGTCACGT
TGTAAAAAGAAGTGAATGTTAAATGTAAGTCGAATAACAGCCAAATAAAAAAAAATAGTGGAAGATGAAGCCATCAACCC
CACCAACACAATTTCTCATCCAACAAATAAAGGCTATGGTGGCCTTGCTTCTCTTATGTTTAGGGTTATTGTGGTCTTTT
AGAAAAATAGGCTGTCTTGCCCTTTTATAGACTAATATTAAGAGCGAGACTTGCTTAGGTTGTCAATTCATGGGCAAAAT
CATTGTAGCAAGAGTATATTTTCAAGTATTTCGTAT-AAATCAAGCTATCTTTTAAAACAATAAATA-TTTTTGTTAATC
AAGACAAATTTAAAAAAATGCACACAGTTGGGAAAAACTAAAATCAGAAGTACCCTCGTTCCCGATAATATTTTTGGGTT
CCTAGCATTTTTATTTTTCCATTTTGTCATTCAATTAAAAATATGGGATAGTTTGATAATTGTCTTTCAAATTTTCCTTT
TCATACATTTTTTTGTTTCCCAAATTATGGTTTGAAGTGTCTCGTATGTGAATCATCACCTTCTTCTTACTCTCCTAGGG
GTAGTTTCCTAAATCCTAGTCAGAGTCTTCTTACTAGGAACCTATTTTAAATGGTTTTAGAGAAATCATTTTCTTTAAGA
AATACATTTGAAAATTAGGGAAGACTAAAAACAATTTGATAACAAAATACATAATCAACTAGGTGATTTTAAAATATAAA
ATATCAAGTTAGTTTGGAAAAAAGGAAAATAAGAAGTGCCCAACATGTTTTTAAGGTCCATTTTTTAATCAACTTTCATT
AAAAACCATGGATTTTCTAATTACTGAATTCAAATTTCCACCTCCATAGAAATTTGTGTCATTAAGATACCTTTTACTTT
TAATCTTTTTATCTGTTTCCTAAACATTTGTATTATTTCATCCTCATGCCATGGCTATCACATGTGTGCAGTATTAGCCA
TGTGATCAGATATCAAATCGCTTCAATGTCGGACGAGGAGCCCCTTAAGAAAAATATGTTCAATACTGAAATTTTAATGA
ACATTT
>chr5B_1
CGTGTCCATATTCTTTTTTTATTTTCCATGGTCCTACGTGTATCATTGATATGATAAACACCATAGTCTAAGCCACGTAC
ATACATGCTTC-AAAAAAAAGCCACCTACATACCGACTAGTCAAAACTAAAGCCACGTACATACCGACCTGTCAAAACTG
ACCGCATAACAAAACACTAGTCTCTGCACAAAGGAACACCAGCCAAGAACTAAAATTACAAAGATGACAGAAGAAACCCC
TGAGCTTGACAGCAACGCCCCTCACCTCCTCTAGCAACACCAC------------------AAACGATGGATCACCTTCA
CACCCGAGTTCGACACGGCGCCATCATTGATATGCAGTTTTGCGGATCTTCAAGGTGGCTCACCAAAGGCGAAACCATTA
CCATTGAACAAACCAAACCGGGGAAACACTCTGGACATGACATCGAACTCCATATCTGGCACCTCCACATGACTAAAGCG
TCGGAGGAAGAAACCATACCTGCCTTTCACGTAACATAAACCTTAGCACATAATCCATCATCTTTGAGATGCTGCCGATG
CTGATTAATTTGCATCCTCTACCGGAATACCTGCCAAACTGCATGTGCGCCACCGGTGGATCGAAATCTGTCGCAATGGC
AGAGCCCGACGAATCAGGTCCACCACCACGACGGCATCACCACCACCATCCTTGCTCGAACAGATGCGGGAATCCGACGA
CCGGCACATGGAGCCGATGACCCCCCTCATCACCGACGACTGACTAAACTAATTTGACCTAAAACTATACACACGTGA-G
GATCCGGCGACCCACCTCATCATAGACGACCGAGGTCGTTGGAGGAGGGGAGCCGTCGGAGGAACTCCCTGGCGACGGGC
GCTATCAAGATCGCCTCTTCCTTTGATAGGAAAAAAGAATTTTTTGCTTGTTTACCAGTCGAGGTTTGCACGTGTCAACA
GCCTAATCCCCGGCCCAACCACATCGACGCCCCATGTGTATTTCCAGGCGGACTCGGTTTCAATTCCGCCGTTTGCCCGA
TCGATATATACGCCC---CTCCCCTGCCAAAGAATCGATCTACTCTAATTAACGTTGTGCTGAAATAAATCAGTCAAA-T
CAATGGCAGGTCTTAATACCTTGCGGCAACTGGTGGGACTCTTGCCGGAGGTTGCCGACCGCCGAGCTACCCCTGTTCCT
TTCCGGAACAAGGCGCTGAACACGATCACGTCGGTCCTCGTCTTCTTGGCCGGCAGCCGGTTGCCGCTGTATGGGCTCTC
GACCACCGCGTCTCCGGACCCCTTTTACTGGATCCACGCGGCCAGCGCCTCCAACGGCGGCACTGTCATGGCTCAAGGGG
TATACCACTTGCTGGTATCCGAGCTGGTCATCCACCCCTTGTTCCGACTGAAGATTGTCAGGGACAAGATTCCCGTGGAA
GAACGCATGCAGTTCATGTAAGTCGTCCCTTAT---TTTTCACTTCTTCTTTTAGGGTTTCAACTTTCAAAGTACACCTT
GACCATTGTACTTATCCTTTTGTAC-------------------------------------GTACGGATGATGAGTAGT
AAAA--------------------------------------GTATGA-----------------------------TTG
ACTCTCA------------------TGTGTAATTAATTTCAACTTTTTAACATATGCAGGGATAGGTCCCAGAAGTTACT
GGGCATACTGTTAGCCATGGTGTCTGCAGTTTGCAATGTGTTTTCCGCGGGGCAGCTCGGTCCGGTGAATGCGACTCTGA
TCGCGCTCCAGCTTTTTGCTGGAGGTACCATTGTAATTTACCTTGATGAGGCCCTTAAAAAGGGGCACGGACTGGTATCT
AGTGGCATTGCTCTCTTCACTGCCACCAACATCTGGTAATTAAA------AATTCACATCTGTACACGTTCTGTTTATC-
---CGCATACTCATATTCATAAATAAGTATTGAGCCAGCTAGCTAAGTTGTGCGTTCATTATATTTCTAGCGCGTGTTTC
CTGGAGAGAT------------------ATGGAGGAGAC---------AAGATCGTCATTCCTGCTGGCACGTGTGCATT
CCTGGCGCTCACGGTGAGACTACAAGGCTTGCATCTCCCATTGGCAGTGAGGACACATGGTGTTGACCCTGCGTTGCAAG
CCAACTGCAGCGTGAACCTATCCTACCTCTCCTACATGCCCATCGTGTTTCAGGGTGCCATTGCTTCAAGCATGTATTTC
ATCTCACAGGTAGGTAGTTGTAACTAAAAATAAACTCCATCCATTCTTATATTATTTCTCCGGAGTGTATAATTACTAGC
TAGCTATACCTTTGCAGCTGTTATACTTGCAATACGGCGAAAATAATAATGGAGTGGTCAAGCTGCCCGGCAGTTGGAAG
CGGGATAGTCGGTACCCTGGACAACTTATTCCCATCGGCGGGGTCGCACACTACGTAACCAATCCACCAGCGTGAGTACA
TATGCATCAACAAAATAAAAATACGAATCATTATTCTTTACTTGCAT---------AATCTTGGCGTGGTACAATGTTTA
TTTATAGCTTGT--------------------------------------------------------------------
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--------------------------------TAAAGAAGTTTATTGATTCAT----GCACGCTGCAGCTGGGCTGACTT
AGCAAGAGACCCTGTCCATGTGACACTCTATGCCGTCTTGCTGCTGATGGCATCTGCTCTTATCTCGGCAACATGGTTTG
GTGTTCGTGTATATTCGAGAAATTATGTGGCCAGGTTGCTCGGGGTACGTTTCTTTTCCTTTAATTTACACTTCTCTTCC
TGCATATATGTGTATACGCTC-----------------------------------------------------------
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---------------------------------------------------------------TCAACTTCTGATTGTCA
AGAACCAAGCTAACTGCTTGTTTGGCTACGTGCATGCAGAGGCAAATACCTCTGACGCCTGCTCAGCCCGGCTCCATTCC
CATGACCCGATGGAAGCGTCATGTTGCCATGATAGCACTTCTCGTAGGGCTTTGCGTCGGTGCGCTGACTCTCATGGCAG
GTTTCATATGTGTGCCTGGTTCCGGAACTGGAATTATGCTCGTCGTCACCGTCGTGTGTTCCTACTTTGAAAGGAGAGCT
GGAGATCAGGCTGCTGATGTATT-CTGCCTCTAAGGGGACTAGCTACTCGATCGGACCAAAGGACGTCCATCCCTAAAAT
GCCTGTCTATTTGGGTGTCAAACAACTAGTAATATTCTCACCAAAGGGATGTAATATATTCGTTTATTTGGAAGGTCGTT
CTTCAAAAGTATGTAATAAGCTCAGCGCAATAAAAAAGTATGTAATAAGCTCCCGATAGACCATATATGAAAAACAAGCA
GAATCATTTCAAATAATACTCTTTATTATAAGAGAGAAAATCAGCTCTTTATCCAGACATCTCCCAAACTTTGCGTCATA
CAAGTCGAAACACCATAAGACTAAGAAAAATAAGTGAATATTTTTTTGAATAGTTTTTATTGCTTACCAGAATGTCACGT
GGTAAAAAGTAGTGAATGTTAAATGTTAGTCGAATAACAGCCAAATAAA--AAAATAGTGGAAGATGAAGCCATCAACCC
CACCAACACAACTTCCCATCCAACAAATAAATGCTATGGTGGCCTTGCTTCTCTTATGTTTAGGGTTATTGTAGTCTTTT
AGAAAAATAGACTCTCTTTCCCTTTTATAGAATAGGATTAAGAGCGAGACTTTCTTAGGTTGTCAATTCATGGGCAAAAT
CATTGTAGCAGGAGTATATTTTCAAGTATTTCGTATAAAATCAAGCTATATTTAAAAACAATAAATATTTTTTGTTAATC
AAGACAAATTTAAAAAA-TGCACACAGTTGGGAAAA-CTAAAATCAGAAGTACCCTCGTTTCCGATAATATTTTTGGTTT
CCTAACATTTATATTTTTCCTTTTTGTCATTCAATTAAAAATATGGGATATTCTAATAATTGTCTTTCAAATTATCCTTT
TCATATATTTTTTTGTTTCCCAAATTATGTTTTGAAGTGTTTCGTATGTGAATCCTCACCTTCTTCTTACTCTCCTAGGG
GTAGTTTCCTAAATCCTAGTCAGAGTCTTCTTACTAGGAACATTTTTTCAATGATTTTAGAGAAATCATTTTCTTTAAGA
CATACATTTGAAAATTAGGGAAGACTAAAAACAATTTTATAACAAAATACATAATCAAGTAGGTGATGTTAAAATAGAAA
ATATCAAGTTAGTTTGGAAAAAAGGAAAACAAGAAGTGCCCAACA--TTTTTAAGGTCCATTTTTAACCAACTTTTATTC
AAAAACCATGGATTTTCTAATTACTGAATTCAAATTTCCACCTCCATAGAAATTTGTGTCATTAAGATACCTTTTAGTTC
TAATCTTCTTATCTGTTTCCTAAAGATTTGTATTATTTCATCCTCATGCCATG---------------------------
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------
>chr5D_848
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---------------------------------------------------TTACCTGTCGAGGTTTGCACGTGTCCACA
GCCTAATCCCAGTCCAAG-CACATCGACGCTCCGTATGTATTTCCAGGCGGACTCGGTTTCAACTCCGCCGCTTGCCCGA
TCGATATATACGCCC---CTCC-CTGCCAAAGAATCGATCTACTATAATTAACTTTGTGCTGAAATCAATCAATCA-AAT
CAATGGCAGGTCTTAATCGCTTGCGGCAACTGGTGGGGCTCTTGCCGGAGGTCGCCGACCGCCGTGCTACCCCTGTTCCT
TTCCGGAACAAGGCGGTGAACACGGTCACGTCGGTCCTCGTCTTCTTGGCCGGCAGCCGGCTGCCGCTGTATGGGCTCTC
GACCACCGCGGCTCCAGACCCCTTGTACTGGATCCACGCGGCCGGCGCCTCCAACTACGGCACCATCATGGCTCAAGGGG
TATACCCTCTGCTGGCATCCGAGCTGGTCATCCATCCATTGTTCGGACTGAAGGTTGTCAGGCTCAAGATTCCCATGGAA
GAACGCATGCAGTTCATGTGAGTCGTCCCTAGCTTATTTTCACTTCTTTTTTTTAGGGTTTCACCATTATTATTATTATT
ATTATTATTATTATTATTATTATTATTATTACTATTATAACTATTATTATTATTTTCCTTTTGTACGGGTGATTAGTAAA
AATATGTTTTTGCAAATACAGGCAGCTATTATGTAGGAGTATGTATGTATTGTGAGTGGTAGTTTACAAGAGCTTCACTC
TTCTGATTGATTCTCGTGTGTGTACTGTGTAGTTAATTTCAACTTTTTAACCTATGCAGGAATAGGTCGCAGAAGTTACT
GGCCATACTGATAGCCATGGTGTCGGCAATTGGCTGTGTGTTGAATGCGGGGCAACTCGGTTCGGGGAATGCGATTCTGA
TCGCGCTCCAGCTTTTTGCTGGAGGTGCCATTGTCATTTACCTTGATGAGGCCCTTAAAAAGGGACACGGGCTGGTATCA
AGTGGCATTGCTCTCTTCACTGCCACCAACATCTGGTAATTAAGCATAAAAATCCACATATGTACATCTTATATACTACG
TTTATAAGTATATTGAGCCGGCCG-------------GCTAGCTAAATTGTGCGTTCATTATATTTCTAGCGCGTGTTTC
CTCTGGGAGCTGGCATATGGCGGCGTTCATGGAGGAGACAAGGTGCCGAAGATGGTTGTTGCTGCTGGCATGTGTGCCTT
CTTGGCGCTCACGGTGAGACTACAAGGCTTGCGTCTCCCGTTGGCAGTGAGGACACATGGTGTTGAACCTGCGTTACAAG
CCAACTGCAGCGTGAACCTGTCCTACCTCTCCTACATGCCCATCATGTTTCAAGGTGCCATTGTTTCAAGCATGTATTTT
TTCTCACAGGTAGGTAGCGCTAGCTAAAAACT------ATCCATTCTTATATTATTTCTCCGGAATATAAATTGAGCTAC
------TACATTTGCAGCTGTTATACTTGAAATACGGCGAAAATAATAATGAAGTGATCAAGCTGCTCGGCAAGTGGAAA
CGGGATTATCGGTACCCTCGACAACCTATTCCCATCGGCGGGGTCGCACACTACGCAACCACGCCACCAACGTGAGTACA
CGCACGG--ACATAATAAA--TACGAATAACTATTCTTTCCTTGCATCTTGGACGAAATCTTTAT---GTAGTATGTTTA
TTTAGCTTGCTAACCAGCGCTTGATGAGTTTCTTTTTTTGAAACGTGTATCGCTTGGTGTTAGCTAACCTTCGCAGGAAT
GAACTAGTACGTATAAGATATATTTTTTGTAGAACTCGTACGTACAAAGTAGCAGTGCTCTAGTCAATTTACTGTAATTT
CCCTACAAAGGAAAAAATAGTACTCCTATGTATGTATTTTACAGTAATTTTCCTACAAAGGAAAAAATAATACTCCTAGC
GATACCCTAGAAGTTTCGCTTCCGGAAGCCGAGATTTATGATCAGATTGGGTTTTTTAGATGGATCAGGGATTAGATTAG
GTCAAATGAAAATGACTAAACTGCCCTTTTAAATAAAGGGCTAGATTCGAGTGATACTGTGGTGTGGTTGGGCTCGTCGG
GCGCGTCGGGTGCGCGCGGGACGTGCGGGACACACGGGTGCAGTCGGGCTCGTCAGGCGCGTCAGGCGCGCGCGGGACGT
GCGGGACGCAGCGGAAGCCGTGGCAAAGTGCGTACGTGGTGTAGTGTGTGTGTGCTCGTGGCTGTAGCGTGTGTGCGTGC
GTCGCGTAGCTGGCGTGAGTTAGTGGTCGGTTGGGGTGGCCGGGTCATGCGTGCATGCATTAGATGGATAAGTTAGTTTG
CATCAGGTTGTTAGCTGGTTGTTCGCTGCATGCATGATCGGGTCAAGTGGCCGTTGTAGAGCAGAACGTGGGCGTGGATG
CATGCGTGACGGAAGCGTGGGCGCTGCGTCTCTGCCGGCTACAAAGCAGGCTGGTATGCTCGTGTTTGGAGGGGCGTTGT
GTATCCAGTTTGAAGTAATGAGAAAAAGGATGTACGTTGTGGCCGGAAAAACATCTCTGTTATCTTATACTTCTTCTACC
TTCGTCCACTGAGACTGAGAGAGAGCTGCGCCAACAAAAAGTTCTCATGTATCATAGTACATACTCCTTCTAATCCTAAT
TAGGGTAAGACCACATATATAGTACTCCTTCGGTTCACAAATGTTAGATGCGCTTATCTTTTTTCTGAATCGTATGTTTG
CGTGTATATAGACAGGTTTTAGTTCATATTGAAATACCCAAAACATCTTATATTTATGAACAAAGGGAGTAACATATATC
TGCATATCTGATTTTTATTTCGTTTTACCCTGTAAACTAATTTATTGATTCAT----GGGAAGTGCAGCTGGGCTGACTT
AGCAAGAGATCCGGTCCATGTTACACTCTATGCCGTCTTGCTGCTGATGGGATGCGCTCTTATCTCGGCAACATGGTTTG
GTATTCGTGTATATTCAAGGAAATATGTGGCCAGGTTGCTCGGGGTATATGT-TTCTTCCTTAATTTAGACTTGCCTTCC
TTCATATATATGTATACGCTC-----------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------TCAACTTCTCATTGTCA
AGAACCTAGCTAACTGCTTGTTTGGGTACGTGCATGCAGAGGCAAATTCCTGTGACGCCTGCACAGCCCGGCTCCATTCC
CAGGAACCGATGGAAGCGTCATGTTGCCATGATAGCACTTCTCGTTGGGCTTTGCGTCGGTGCCCTGACTCTCATGGCAG
GTTTCATCGGTGTGCCTGGTTCCGGAACTGGAATTATGCTCGTCGTCACCGTCGTGTGTTCCTACTTTGAAAGGAGAGCT
GGAGATCAGGCTGCTGATGCATT-CGGCCTCTAAGGGGACTATCT-----------------------------------
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------
>chr1A_2660
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----------------TCAAGATGGCAATGGGGCCCCGAAACCCGCATCCCAT-GGGTTTTTACCCTATTAGGGGACGGG
GATGGGTGTCTTTTCATCCCCGCGGGGCTGTTGTTGGGCACATTATACAACCCGACACGTTTCGTGGGTTTGCACCCGTT
TCAATAGTCCCCGAACCCGAAGCCCGGTAAACCCGGCAAAATACATTTTTTACCAAGCATTTTCTTTACATATCATCATA
AAGTTTATCATTATCTTGCTGCAATGTTTCATAAGATGTTCATTACTACTTATTTGATTCTCATATGTAATTGCATATCT
TGTTGAACCATGTATGGCTGAAATTTGCTCATCTTTGTTGCTGAAATGTGGTATCATGCCGTTGAAATACATTCTATATA
GCTATTGAACCATCTACTATTATTTTTTGTTAAAATTTGCTCAAGTTATGATGCTGAGATGTGCTTGTTTTGCTGCTGAA
ATGTTATTCTTTGTCGCCACTATGTTTGTTTGAATATTTTGATTTTCTCGTGGGTT-----------CCCCGAAACCCGA
TGGGTTTAGGGGACGGGCAGAAAACTATCCCCGCGCATGGTGATGGGGACGGGGATGGGTTTACGATTTTCTCGTGGGGA
TGGGTTTGGGAAGGCAAAACCCGATGGGTTTCGTCCCCATTGCCATCTTGA-----------------------------
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------
>SNPs
-------------------S-----------------------------------S-----------S------------
--S-------SS-------------------------S----------S-------S-----------------------
-S------------------------------------------------------------------------------
----------------------S-------------S------SSSSSSSSSSSSSSSSSS-------------------
--------------S----------------------------------------------S----------------S-
--------------------------------------------------------------------------------
---------------------------------S-------------------S-----------S-----S--------
---------------------------------S----------------------------------------------
---------S----------------S---------------------------------------S-------------
-------------------------S--------------S----------------------------------S-SS-
----S-S---------------SS----------------------------------S--S-----------------S
-----------------------S--S--------------S---------------------------------S----
-------------S------------------------------------------------------------------
---------------SSS------------------------S-------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S--S----S------SSSS-SS-SS---
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
-----------------------------------------------------SSS---SSS--S-SS----S------S
SSS-----------------------------------------------------S---------S-------------
-------S------------------------------------------------------------------------
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----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------SS----------------------------
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-----------------------------------------------------SSSS-----------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
----------------------------------------------S----SSS--------------------------
-----SS-------------------------S---------------------------------S-------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S---------------------------S------------------------------------------------
--------------------------------------------------------SSSSSSSSSSS-------------
---------------------------S----------------------------------------------------
--------------------------------------S------------SSSSSSSSSSSS-----------------
--------S-----------------------------------------------------------------------
---------------------------------------------S----------------------------------
-----------------------------------------------------------------------------S--
-----------------------S-----------S---------SSSSSSSS-SS-SSS--SS----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S---------------------------------------------S-----------------S------
------------------S----------------------------------------S---------S----------
S--------S----------------S----------------------SS-----------------------------
-----------S---S---------------S----------------------------------------S-------
----------S--S----S------------S--SS----------------S---------------------------
----------S--------------------------------------S---S--------------------------
-----------------S------------------S-----------------------S----------------S--
----S-----S---------S-----------------------------S-S-S------------------S------
-----S-----------------------S----------S-------------S-------------------------
-----------------------------------------S-S----S----S--------------------------
S------------------------------------S--------------------S--------S--------S---
-----------------------------S---------------SS------------------S-SSS-SS---SS-S
----------------------------------------------------------------------------S--S
-------S----------------S----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS
>forward_298
--------------------------------------------------------------------------------
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--------------------------------------ACCACAACAGCCACCAAAGA----------------------
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>reverse_1653
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----------------------------------------------------GGACTGGTCGTTTACTCCCG--------
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>forward_823
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---CTGTCGACCCACCTCATCAC---------------------------------------------------------
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>reverse_4086
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-----AAGTCTTTTCATCCCCGCGG-------------------------------------------------------
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>forward_1671
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---------------------------------------------------GGGACTGGTCGTTTACTCCC---------
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>reverse_4087
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------AGTCTTTTCATCCCCGCGG-------------------------------------------------------
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>forward_1673
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-----------------------------------------------------GACTGGTCGTTTACTCCCGA-------
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>reverse_4545
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----------------------------------------------------------------GTTCCCCGAAACCCGA
TGG-----------------------------------------------------------------------------
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>forward_4087
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-------------------------------------------------------------------ATTAGGGGACGGG
GATGGAA-------------------------------------------------------------------------
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>reverse_4958
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-----------------------------------------------------------------------------ACT
GGAGATCAGGCTGCTGA---------------------------------------------------------------
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------
>forward_4588
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--------GGGGACGGGCAGAAAACTAG----------------------------------------------------
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>reverse_6340
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-------------------GCTTCAATGTCGGACGAGGA-----------------------------------------
------
