>input_sequence_26589
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-----------------------------------------ATGGCTGTTTCTGCACTCATTGATTTCGTAACTAGTACT
GTGGCATCCCACTTATGGAACCCTGTGATTACACGTATGAGATGCATAATAGAGAAGGAAGAAAATATTGGCAAGCTCGA
CAGCACTATAAGGAATCTAGAAGCCAGGAAGCAGGAAATCCAAATCCGTCTTATGAACTCCGAAAGGAAGCAAGAAACAT
GTAACCCTGAAGTTGCAGAATGGCTAGAAAAGGTGGCAGAAATAGAAAGTGAAGTGAATGAGATGAAACATGGGCAGAGG
AAGAGAAGGGCCCAGTCTTTCAGTTATTGGTCAAATTATGAAACCAGCATGCAGGCTGCCAAGAAACTCAAGGAAGCTCA
GATGTTGCATGAGAAGGGATCCTTCAAACAGGTGTCGATCGAGGTTCCACCATGTTTCGTGCAAGAAATTCCTACTGTAC
CTTCAACACAAGGAACTGACTGTAACTTAAGCAGAGTTCTCCAATACCTCAAAGATGACAGAGTTGCAATTGTAGGGGTA
TGGGGAATGGGAGGAGTTGGTAAGACCACTTTGCTCAGGAAAATCAACAATCACTTCTTGGGTGTAATCGAAGAAGACTA
TGGATATGACCTTGTTATATATGTTGTGGCTTCTAAGGCGTGTCGAATAGGTCAGCTTCAAGCAGACATCTCTGAAAAGA
TTGGACTCTTCCTGAAACCAGGCTCTAGCATTGAAACACGAGCTTCATTCATGTTAAGTTTCTTAAGACGAAAGAAGTTC
TTGCTCCTGCTAGATGATTTATGGAATTATTTGGATCTAGCAGAAGCTGGTATTCCATATCCTAATGGCCTGAATAAACA
GAACGTAGTTCTTGCAACACGTTTTGAGAGTGTTTGTGGACATATGGATGCTCACAATAGGGTCTTCCTGGAATGCTTGG
ACCAAGAAGAAGCTTGGAAATTGTTCAAAGAAAAAGTATCAGAAGAAACCATTAATTCAGATCCTAGGATTGAAAAGTTA
GCACATGTAGTTGCAGAAGAATGTGGGGGCTTGCCCCTTGCTCTTGTAACTATCGGCCGTGCAATGTCTACAAAGAAGTC
TTATCATGAATGGGCACTTGCTTTGTCATTTCTGAAGAAGTCCCGCATTCATGAGATCCCAAATATGGGGAATGTTGGCC
ACCTATACACTAGGTTAAAGATAAGTTATGATTATCTGCAGGATAAGCAGATCAAAGAATGCTTCTTATGTTGTTCTTTG
TGGCCTGAAGATTACTCAATTTGGAAAGTTGAACTCATAGACTGTTGGATGGGGATGGGTTTGATAGAGTATGATACCAT
GGAAGAAGGATACCACAAGGGTTACTCCATTATTGAGTACTTGAAGGATGTGTGCTTGTTAGAAACCGGCTACTTGGAAG
ATAGTGAGGTGAGAGTACATGACATTATCCGAGACATGTCACTGTGGATATCTTCTGATTGCAGTAAGGAGCACATGAAA
TGGATTGTTCAAGCTGGGATAGGACTTTATAATATTTCTAATACGGACATTGAAACATTTAGGTCGGCCAGAAAGATATC
TCTAATGTGCAATTACATCACCGAACTTCCTC-AGGCCTTGAACTGTCCAAACCTCCAGTTTCTGTCACTACAACAGAAT
TTTCGGCTCAAGGTCATACCCCCTTCTTTTTTGAAGAGCATATTATCTGTGACCTACTTGGATTTGTCCTGGGTTCCCAT
CAAGGAACTTCCACAAGAAATTGGCATGCTGGTTGAACTCCAATATCTCACACTGAAGCAAACACACATTAGATTATTGC
CTATTGCTATTGGGCTACTAAGAAAGTTAAAGTTCCTGGACATGAGCTATATGGATTTCTTGGAGAAGATACCCTATGGT
GTTTTTACAAATTTGTCAATGCTACAGGTTTTAAACCTATATGGTAGCAGGTATGCTGGCCGCGAAGCAGATTTTGATCC
AGCAA------------------------------------ACCACATGGATTATGATGAGTTTAGTGTCGAAGAATTAT
CTTGCTTAAG---------------TCTAGGAATAACAGCAAAGAGAGTGAGTACTCTGCAGAGGCTTTTTGATGTACCT
GGAGTCCACTTGAGATGCCTTGGTTTATATGAATTGAATGGAGAGAGATCTCTTACTCTCACCTTAACGGAAAGTATCCT
TGTTCTGAATGTAATGGGCTGTTCTGATTTAGAGGACTTCTGCATTATGAACA-------AGCCACAATGTTATGAAGAC
CATCTTTCAAGGCTGGAGTACCTAACCTTTTGGGATCTTCCTCGACTTGAGATGATTAGGATGGAGCATCTTCAGAACCT
-------------------------TCGCGTCCTTACGGTGGGGAGAACTTATCAACTGTTAGACC---TGTCCTGCATT
TTAAAGCTACCGTATCTGGAGCA-TTTGAATGTGTCTTGCTGTGATAAAATGAAGCAGATAGTTGATATACAAAATGTTA
TTGACACAGAAGGAAGATATGAAACACCGATTCAGGCATTTCGGCAACTGAGAGTTTTGCAATTAAATTCGTTGCAAAGC
TTGGATAGCTTATGTAATT----CTAAATTGAATTTTCCTTCTTTGGAATACATTGATGTGTTTGCTTGCCCGAAGATGA
AGAAACTACCTTTTGAGCAAATTGGTAAACTGAAGAGGATCAGAGGGGAGCAAACATGGTGGGATAATCTCGAGTGGGAC
GATGAAAGCAGTTCCTTGTCATTGTTGGCGTCTTTTAAGTCGTCAGAAATTTGCTCGGCATCCTTTAGGCCAGAGCTAGA
TACTACTGTGATATCCTCCTCGCCGAAAGCTTTCTTCACCAAGAGGCAGCCCATATTGAATTCATCAGTACGATTCACAT
CCTATCCACAATCAATTTTTGAAACAGAGGAGTTTGATGGGCATATGATGATGGAATAG---------------------
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>chr3D_1_TraesCS3D01G502400
CGCCACATATGCTGTCTATCCTCAATCAATGCGTTGGCCTGCTCGATTTCTTTTCTTGAATAGGCCTGGCCTTATTATAC
TAATTTTCGGTGCGAGTCTTATAGTCGTATGCCTACTCAATTTAACTGGAATAAGGCCACACACACACAATAGGAGGATA
TATATCCAGCTGATGTGTTATTTTCACTTGAGAAACTGGAATAGGCTTATGTGATTTATCTACTCAATTAAACCTGAACA
GTCTGAGAAACTTGTAAATTTAAGGTCAATGTAGCTTGTAATAGTTAACTTACTTCAACACGAACTTTAGTAGTTACCTT
ATTAATGCAATACGATATTTCACTATGAAAAGGATAAAAGAAACTGAATGGAAAAATGTATCATGTGCTTTACCTCACTG
CTCATCTAATCTAATCTCTACATTTTGTTGGCGATGAACCTAATCTCTACATAGTACACCCTCTGCTCCTAAATGTAAGA
CGTTTTGGCAGTTCAAAACGTCTTAAATTTAGAAACAGAGGTAGTCGCCTACCCTTGACAGATCGCCACATAGAATGATA
GTTCAGGATATTAAGAGGCTCTTTCGTGAAAGGGATATCTCTATTGCTCATGTAAGTAGGAATCAGAACGCTGTTAGCCA
CACCCTTGCTGCTTTCGGACAATCGGAGGGCCGAACTGCAGTTTGGTTGCGCTCTGGACCTGCAGACGTTCCTTTGCTAT
GTAGGAACGAATATTCCAACAGTTGAGCAATGAAATCCTTTTACCCCGCAAAAAAAAGAAAAGAAACAGAGGTAGTCGAA
AACAAAAGAGGTTTCCGCAGATTGATACATTTGTATTTTGTACTGGGTGTATACGACCAATATATCTGATGCTTCTCGCA
ATCTTACCTGCAGGTCCCACTTTTGATAGGCATACTTCAAACTTTTGGTGTTGTTATCAATTGAAGGATAATCAGCTTGT
G-AACCATCACCTTGTTCACTGCCTTCTTTCACTCTTATATATGGCTGTTTCTGCACTCATTGATTTCGTAACTAGTACT
GTGGCATCCCACTTATGGAACCCTGTGATTACACGTATGAGATGCATAATAGAGAAGGAAGAAAATATTGGCAAGCTCGA
CAGCACTATAAGGAATCTAGAAGCCAGGAAGCAGGAAATCCAAATCCGTCTTATGAACTCCGAAAGGAAGCAAGAAACAT
GTAACCCTGAAGTTGCAGAATGGCTAGAAAAGGTGGCAGAAATAGAAAGTGAAGTGAATGAGATGAAACATGGGCAGAGG
AAGAGAAGGGCCCAGTCTTTCAGTTATTGGTCAAATTATGAAACCAGCATGCAGGCTGCCAAGAAACTCAAGGAAGCTCA
GATGTTGCATGAGAAGGGATCCTTCAAACAGGTGTCGATCGAGGTTCCACCATGTTTCGTGCAAGAAATTCCTACTGTAC
CTTCAACACAAGGAACTGACTGTAACTTAAGCAGAGTTCTCCAATACCTCAAAGATGACAGAGTTGCAATTGTAGGGGTA
TGGGGAATGGGAGGAGTTGGTAAGACCACTTTGCTCAGGAAAATCAACAATCACTTCTTGGGTGTAATCGAAGAAGACTA
TGGATATGACCTTGTTATATATGTTGTGGCTTCTAAGGCGTGTCGAATAGGTCAGCTTCAAGCAGACATCTCTGAAAAGA
TTGGACTCTTCCTGAAACCAGGCTCTAGCATTGAAACACGAGCTTCATTCATGTTAAGTTTCTTAAGACGAAAGAAGTTC
TTGCTCCTGCTAGATGATTTATGGAATTATTTGGATCTAGCAGAAGCTGGTATTCCATATCCTAATGGCCTGAATAAACA
GAACGTAGTTCTTGCAACACGTTTTGAGAGTGTTTGTGGACATATGGATGCTCACAATAGGGTCTTCCTGGAATGCTTGG
ACCAAGAAGAAGCTTGGAAATTGTTCAAAGAAAAAGTATCAGAAGAAACCATTAATTCAGATCCTAGGATTGAAAAGTTA
GCACATGTAGTTGCAGAAGAATGTGGGGGCTTGCCCCTTGCTCTTGTAACTATCGGCCGTGCAATGTCTACAAAGAAGTC
TTATCATGAATGGGCACTTGCTTTGTCATTTCTGAAGAAGTCCCGCATTCATGAGATCCCAAATATGGGGAATGTTGGCC
ACCTATACACTAGGTTAAAGATAAGTTATGATTATCTGCAGGATAAGCAGATCAAAGAATGCTTCTTATGTTGTTCTTTG
TGGCCTGAAGATTACTCAATTTGGAAAGTTGAACTCATAGACTGTTGGATGGGGATGGGTTTGATAGAGTATGATACCAT
GGAAGAAGGATACCACAAGGGTTACTCCATTATTGAGTACTTGAAGGATGTGTGCTTGTTAGAAACCGGCTACTTGGAAG
ATAGTGAGGTGAGAGTACATGACATTATCCGAGACATGTCACTGTGGATATCTTCTGATTGCAGTAAGGAGCACATGAAA
TGGATTGTTCAAGCTGGGATAGGACTTTATAATATTTCTAATACGGACATTGAAACATTTAGGTCGGCCAGAAAGATATC
TCTAATGTGCAATTACATCACCGAACTTCCTC-AGGCCTTGAACTGTCCAAACCTCCAGTTTCTGTCACTACAACAGAAT
TTTCGGCTCAAGGTCATACCCCCTTCTTTTTTGAAGAGCATATTATCTGTGACCTACTTGGATTTGTCCTGGGTTCCCAT
CAAGGAACTTCCACAAGAAATTGGCATGCTGGTTGAACTCCAATATCTCACACTGAAGCAAACACACATTAGATTATTGC
CTATTGCTATTGGGCTACTAAGAAAGTTAAAGTTCCTGGACATGAGCTATATGGATTTCTTGGAGAAGATACCCTATGGT
GTTTTTACAAATTTGTCAATGCTACAGGTTTTAAACCTATATGGTAGCAGGTATGCTGGCCGCGAAGCAGATTTTGATCC
AGCAA------------------------------------ACCACATGGATTATGATGAGTTTAGTGTCGAAGAATTAT
CTTGCTTAAG---------------TCTAGGAATAACAGCAAAGAGAGTGAGTACTCTGCAGAGGCTTTTTGATGTACCT
GGAGTCCACTTGAGATGCCTTGGTTTATATGAATTGAATGGAGAGAGATCTCTTACTCTCACCTTAACGGAAAGTATCCT
TGTTCTGAATGTAATGGGCTGTTCTGATTTAGAGGACTTCTGCATTATGAACA-------AGCCACAATGTTATGAAGAC
CATCTTTCAAGGCTGGAGTACCTAACCTTTTGGGATCTTCCTCGACTTGAGATGATTAGGATGGAGCATCTTCAGAACCT
-------------------------TCGCGTCCTTACGGTGGGGAGAACTTATCAACTGTTAGACC---TGTCCTGCATT
TTAAAGCTACCGTATCTGGAGCA-TTTGAATGTGTCTTGCTGTGATAAAATGAAGCAGATAGTTGATATACAAAATGTTA
TTGACACAGAAGGAAGATATGAAACACCGATTCAGGCATTTCGGCAACTGAGAGTTTTGCAATTAAATTCGTTGCAAAGC
TTGGATAGCTTATGTAATT----CTAAATTGAATTTTCCTTCTTTGGAATACATTGATGTGTTTGCTTGCCCGAAGATGA
AGAAACTACCTTTTGAGCAAATTGGTAAACTGAAGAGGATCAGAGGGGAGCAAACATGGTGGGATAATCTCGAGTGGGAC
GATGAAAGCAGTTCCTTGTCATTGTTGGCGTCTTTTAAGTCGTCAGAAATTTGCTCGGCATCCTTTAGGCCAGAGCTAGA
TACTACTGTGATATCCTCCTCGCCGAAAGCTTTCTTCACCAAGAGGCAGCCCATATTGAATTCATCAGTACGATTCACAT
CCTATCCACAATCAATTTTTGAAACAGAGGAGTTTGATGGGCATATGATGATGGAATAGTTTTACTAGTATCGTCTACCA
GTTTC---CCAGAACATCACGCTGACTTTCATTAGCTGCTCAAGGTATGATTTTTTGGTACTACACCATTGTTCACTGAC
TGGTTAATCAATTCTATCAAGATTAGAAATACACAGTCACGCTATTCTGTTATTTTATCATGTACGATAACTCTACTTTC
ATTGTCAG---TTTTCCCGATTTGACAGGTTCAGTTTGATGGTTAAAAAATA-GTTACAAAATGTAAGGTGCACCTGTTG
AGTAAAGCTTACGATTAGTTGCTGAAGCGTTGGACCAAGTCAA-------------------------------------
------------------GTGTGTTTGACCTTGTTCTAGTTTTCGGTCTTTATCCCTTTCAAAG-------------TTG
TTAGGCATCTGAAGCTACCTGTACTTTTCCACAACCATTGTGAATTGTGAA----------------CTCTGG----TTT
ACGCCAGAAGGGAATAGATCAAAGT-------------------------------------------------------
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--------------------------GTGTGTTGTTTACCTTGTATAGCCCAGCAGCTCTTGA---TTGCATACTAACAC
TAGACGAACTTCTGTTGCAAGCTGCCCACAGACAAGTACTAGGATAACTCCATGTAGATTGTACTGTATTAGACAAGACA
GAGAAATCAATTGGTCGAGTGTTTATGTTC----TAACTTCTAACACCAAGTCTCATTATGTTCCATGTGCAGATGGCAA
GCTCTGTTTGACTGAATCCATCCATCGTGAATTCGTGATTTTCCATGGCCTCCTGGCCGAACCGAACAGAAGGAAGTTGG
ATCGGAAGGCCACCGCCGGAACCTGAGAAAGCATAGAAAGAATGAAAGATCCACCACCGCTCACCTGACTTGAAATCGAT
CAACGGACTGCTTGCCATGCATCAGGCACAAGAACAAGATGATGCTGGTGCCACCGGACTGTCTGTC-GACTCCGAAGAA
ACTGAAAATGATTGTGCGCCGGCTGAGATGGGAACCTGAAGGGTGTCATCGACTCGGGCTGATTCACCCACCACTTCGGG
GAAAAAGCTGGCGGCGTCGTGCGGGCCCAGTCTGGCGGTGTG
>chr3A_32
-------------------------------CGTTGGCCTGCTCGATTTCTTTTCTTGAATAGGGCTGGCCTTATTACCG
AAAAAGGGTTTCCCCCCCGCTTTGTATACAAAGCAACCAACCGAGACATCCAACGATAGGTGCTGGGGCGGAAGCAGCAC
AGTCACGCCCAAAA------------------------------------------------------------------
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---------GGTTTAGCCAGATTGATGCGTTCGTATTTTGCACTGGGTGTATGTGACCAATATATCTGATGCGTCTCGCA
ATCTAACCTGCAGGTCCCACTTTTGATAGGCATAGTTCAAACTTTTGGTGTTGTTATCAATTGAAGGATAATCAGCTTGT
G-AACCATCACCTTGTTCACTGCCTTCTTCCACTCTTATACATGGCTGTTTCTGCACTCATTGATTTCGTTACTAGTACT
GTGGCATCCCACTTATGGAACCCTGTGATTACACGTATGAGATACATAATACACAAGGAGGAAAATATTGGCAAGCTGGA
CAGAACTATAAGGAATCTAGAAGCCAGGAAGCAGGAAATCCAAATCCGTCTTATGAACTCCGAAAGGAAGCAAGAAACAT
GTAACCCTGAAGTTGCAGAATGGCTAGAGAAAGTGGCAGAAATAGAAAGTGAAGTGAATGAGATGAAACATGGGCAGAGG
AAGAGAAGGGCCCAGTCTTTCAGCTATTGGTCAAATTACGAAACTGGTATGCAGGCTGCCAAGAAACTCAAGGAAGCTGA
GATGTTGCATGAGAAGGGATCCTTCAAACAGGTGTCAATTGAGGTTCCACCATGTTCCGTGCAAGAAATGCCCACTGTAC
CTTCAACACAAGGAGCAGACTGTAACTTAAGCAGAGTCCTCCAGTACCTCAAAGATGACAGAGTTGGAATTGTAGGGGTA
TGGGGAATGGGAGGAGTTGGTAAGACCACTCTGCTCAGGAAAATCAACAATCACTTGTTGGGTGTGATCGAAGAAGACTA
TGGATACGACCTTGTTATATATGTTGTGGTGTCTAAGGCGTGTGGAATAGGGCAGCTCCAAGCAGACATCTCTGAAAAGA
TTGGTCTCTTCCTGAAACCAGGCTCCAGCATTGAAACACGGGCTTCAGTCATGTTAAGTTTCATAAGGCAGAAGAAGTTC
TTGCTCCTGCTAGATGATTTATGGAATTATTTGGATCTAGCAGAAGCTGGTATTCCATATCCTAGTGGCCTGAATAAACA
GAAGGTAGTTCTGGCAACACGGTATGAGAGTGTTTGTGCAAATATGGATGCTCACAACAGGGTTTTCCTGGAATGCTTGG
ACCAAGAAAAAGCTTGGAAATTGTTCAAAGAAAAAGCAACAGAAGAAACCATTAATTCAGATCCTAGGATCGAAAAGTTA
GCACATGTAGTTGCAGAAGAATGTGGGGGCTTGCCCCTTGCTCTCATAACTATCGGCCGTGCAATGTCTTCAAAGAAGTC
TTATCATGAATGGGCACTTGCTTTATCATTTCTGAAGAAGTCTCGCATTCATGAGATCCCAAATATGGGGAATGTTAGCC
ACCTATACAATAGGTTAAAGATAAGTTATGATTAGCTGCAGGATAAACAGATCAAAGAATGCTTCTTATGTTGTTCTTTG
TGGCCTGAAGATTACTCAATTTGGAAAGTTGAACTCATAGACTGTTGGATGGGGATGGGTTTGATAGAGTATGATACCAT
GGAGGAAGGATACAACAAGGGTTACTCCATTATTGAGTACTTGAAGGATGTGTGCTTGCTGGAAACCGGCTACTTGGATG
ATAGTGAGGTGAGAGTACATGACATTATCCGGGACATGTCACTGTGGATATCTTCTGATTGCAGTGAAGAGCACATGAAA
TGGTTTGTTCAAGCCGGGGTAGGACTTTATAACATTTCTAATAGGGACATCGAAACATTTAGGTCAGGTAGAAAGATATC
TCTAATGTGCAATTACATCCCCGAACTTCCTC-GGGCCTTGAACTGTCCAAACCTCTAGTTTCTGTCACTACAACAGAAT
TTTCGGCTCAAGGTCATACCACGTTCTTTTTTAGAGAGCATATCATCTGTGACCTACTTGGATTTGTCCTGGGTTCCCAT
CAAGGAACTTCCAGAAGAAATTGGCATGCTGGTTGAACTCCAGTATCTCACACTGAAGCAAACACACATTAGATTATTGC
CTATAGCTATTGGGCTATTAAGAAAGTTGAAGTTCTTGGACATGAGCTATATGGATTTCTTGGAGAAGATACCCTTTAGT
GTTTTTACAAATTTGTCAATGCTAGAAGTTTTAAACCTATATGGTAGCAGGTATGCCGGCCGCGAAGCAGATTTTGATTC
AGCAA------------------------------------ACCACATGGATTATGATGAGTTTAGAGTCGAAGAATTAT
CTTGCTTAAG---------------TCTAGGAATAACGGCAAAGAAAGTGAGTACTCTGCAGAGACTTTTTGACGTACCT
GGAGTCCACTTGAGATGCCTTGGTTTATATGAATTGAATGGAGAGAGATCTCTTACTGTCACTTTAACGGAAAGTATCTT
TGTTCTGAATGTAATGGGCTGTTCTGATTTAGAGGACTTCTGCATTATGAAAA-------AGACAAAATGTTATGGAGAC
CATCTTTCGAGGCTGGAGTTCCTGACCTTTTGGGATCTTCCTCGACTTGAGAAGAATAGTATGGACCATCTTCAAAACCT
-------------------------TCGTGTCCTTACAGTGGGGAGAACCTATCAATTGGTAGACC---TGTCCTGCATT
TTAAATTTACCATATCTGGAGCA-TTTGAATGTGTCTTGCTGTGATAAAATGAAGCAGTTACTTGATATACAGAATGCTA
TTGTCACGGAAGGAACATATGAAACTCCGATTCAGGCATTTCGGCAACTGAGAATTTTGCAATTGAATTCGTTGCAAAGC
TTGAATAGCTTATGTAATT----CTGAATTGGATTTTCCTTCTTTGGAATATATTGATGTGTTTGCTTGCCCGAAGATTA
AGAAACTACCTTTGGGGAAAATTGGTAAACTGAAGAGGATAAGAGGGGAGCAAACATGATGGGATAATCTCGAGTGGGAC
GATGAAAGCAGTTCCTTGTCATTGTTGGCGTCTTTTAAGTCATCAGGAATTTGCTCGGCATCCTTTAGGCCAGAGCTAGA
TACCACTGTGATATCCTCCTCGCCGAAAGCTTTCTTCACGAAGAGGCAGCCCATATTGAATTCATCAGTACGATTCACAT
CCTATCCACAATCAATATTTGAAACAGAGGAATTCGGTGGGCATATGATGATGGAATAGTTTCACTAGTATCATTTACCA
G---TTCTCCTGAACATCTCGCTGAGTTTCATTAGCTGCTCAAGGTATGATTTTTTGATACTACACCATTGTTCACTGAC
TGATTAATCAATTCTATCAATATTAGAAATACACAGCCATGCTATTCTGTTATTTTATCTTGTACTATAACTCTAGTTTC
G--GTCAG---TTTTTCCGA-TTGACGGGTTCAGTTTGATGGTTAAAAAATAAGTTACAAAATGTAAGGTGCACCTGTTG
AGTAAAGCTTACGATTAGTTGCTGAAGCGTTGGACCAAGTCAA-------------------------------------
------------------GTGTGTTTGACCTTGTTCTAGTGTTCGGTCTTTATCCCTTTCAAAG-------------TCG
TTATGCATCTTAAGCTACCTGTACTTTTCCACAACCATTCTGAATTGCGAAGAG--------TGGAGCTCTGG----TTT
ACGCCAGAAGGGAATAGATCATATGCATTAATTTTCATCATCTGACGG--------------------------------
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----------------------------------------------------------------------------CTGA
TGGTGTACACGGTCAAACAAAATAAGTGTCTTTTTAGCATGTCAGGCTGTTAGCAAAACT--------------------
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--------------------------GTGTGTTGTTCACCTTGTATAGCCCAGC---TCTTGA---TTGCATACTAACAC
TAGACAAACTTCTGTTGCAAGCTGCCCACAGACAAGTACTAGGATAACTCCATGTAGATT-----GTATTAGACAAGACA
GAGAAATCAATTGGCCGAGTGTTTATGTTCTAAGTAACTTCTAACACCAAGTCTCGTTATGTTCCATGTGCAGATGGCAA
GCTCTGTTTGACTGAATCCATCCATCGTGAATTTGTGATTTTCCATGGCCTCCTGGCCGAACCGAACAGGAGGAAGTTGG
ATTGGACGGCCACCGCCAGAACCTGAGAAAGCGTAGAAGGAACGAAAGATCCGCAACCGTTAGCCCGACTTGAAATCGAT
CAACGGACTGCTTGCCATGCATCAGGCACAAGAACAAGATGATGCTGGTGCCACCGGACTGGCTGTCTGACTCTGAAGAA
ACTGAAAATGATTGTGCGCCGGCGGAGATGGGAACCTGAAGGGTGTCATCGACTCAGGCTGATTCACCCACCACTTCGGG
GAA---GCTGGCGGCGTCGTGCAGGCCCAGTCTGGCAGTGTG
>chr3D_793
TAGTAGAAACAT--------------------------------------------------------------------
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---AAAAGCGGTTTCAGCTGATTGATACGTTGGTATTTTGTACTGGACGTATTTGACCAATATATCTCATGCTTCTCACA
ATGTCACCTGCAGGTCCAAATTTTGATAGGCACAGTTCAACATTTTGATATTGTTGTCAATTGAAGGATTATCAGCTCGT
GAAACCATCACCTTGTTCACTGCCTCCTTTCACTCTCATACATGGCTGTTTTTGCGCTCATTGATTTCGTGACTAGTGCT
GTGGCATCGCACTTATGGAATCCTGTGATTACACGTATGATATACTTAATAGAGAAGGAAGAAAATATTGGCAAGCTGGA
CAGCACTATAAGGAATCTAGAAGCCAGGAAGCAGGAAATCCAAATTCGTCTTATGAACTCTGAAAGGAAGCAAGAAACAT
GTAACCCTGAAGTTGCAGAATGGCTAGAAAAGGTGGCAGCAATAGAGAGTGAAGTGAGTGAGATGAAACATGGGCAGAGA
AAGAGAAGGGCCCAGTCTTTCAGCTATTGGTCAAATCACGAAACTGGCATGCAGGCTGCCAAGAAACTCAAGGAAGCTGA
GATGTTGCATGAGAAGGGATCCTTCAAACAGGTGTCAATTGAGGTTCCACCATGTTCCGTTTAAGAAATGCCCACTGTAC
CTTCAACACAAGGAGCAGACTGTAACTTAAGCAGAGTCCTCCAGTACCTCAAAGATGACAGAGTTGGAATTGTAGGGGTA
TGGGGAATGGGAGGAGTTGGTAAGACCACTTTGCTCAGGAAAATAAACAATCACTTCTTGGTTGTAAAT---GAAGACTA
TGGTTATGACCTTGTTATATATGCTGTGGCTTCTAAGGCGTGTGGAATAGGTCAGCTTCAAGCAGACATCTCTGAAAGGA
TTGGACTCTTCCTGAAACCAGGCTCTAGCATTGAAACACGAGCTTCAGTCATGTTAAGTTTCTTAAGGCGAAAGAAGTTC
TTGCTCCTGCTAGATGATTTATGGAATTATTTGGATCTAGCAGAAGCTGGTATTCCATATCCTAATGGCCTGAATAAACA
GAAGGTAGTTCTGACAACACGTTATGAGAGTGTTTGTGGACATATGGATGCTCACAGCAGGGTCTTCCTGGAATGTTTGG
ACCAAGAGAATGCTTGGAAATTGTTCAAAGAAAAAACAACAGAAGAAACCATTAATTCAGATCCTAGGATTGAAAAGTTA
GCACATGCAGTTGAAGAAGAATGTGGGGGCTTGCCCCTTGCTCTTGTAACTATCGGCCGTGCAATGTCTACAAAGAAGTC
TTGTCATGAATGGGCACTTGCTTTGTCATTTCTGAAGAAGTCTCGCATTCATGAGATTCCAAATATGGGGAATGTTGGCC
ACCTATACACTAGGTTAAAGATAAGTTAGG-------GCAGGATAAGCAGATCAAAGAGTGCTTCTTATGTTGTTCTTTG
TGGCCTGAAGATTACTCAATTTGGAAAGTTGAACTCATAGACTGTTGGATGGGGATGGGTTTGATAGAGTATGATACCAT
GGAGGAAGGATACAACAAGGGTTACTCCATTATTGAGTACTTGAAGGACGTGTGCTTGTTGGAAACCGGCTACTTGGAAG
ATAGTGAGGTGAGAGTACATGACATTATCCGAGACATGTCACTGTGGATATCTTCTGATTGCAGTAAAGAGCACATGAAA
TGGATTGTTCAAGCCGGGCTAGGACTTTATAACATTTCTAATACGGACATCAAAACATTTAGGTCAGCCAGAAAGATATC
TCTAATGTGCAATTACATCACTGAACTTCCTC-CGGCCTTGAACTGTCCAAACCTCCAGTTTCTGTCACTACAACAGAAT
TTTCGGCTCAAGGCCATACCCCCTTCTTTTTTGAAGAGCATATTATCTGTGACCTACTTGGATTTGTCCTGGGTTCCCAT
CAAGGAACTTCCAGAAGAAATTGGCATACTGGTTGAACTCCAGTATCTCACGCTGAAGCAAACACACATTAGATTATTGC
CTATTGCTATCGGGTTACTAAGAAAGTTAAAGTTCTTGGACATCAGCTATATGGATTTCTTAGAGAAGATACCCTATGGT
GTTTTTACAAATTTGTCAATGCTACAGGCCTTAAACCTATATGGTAGCAGGTATGCGGGCCACGAAGCAGATTTTGATCC
AGCAA------------------------------------ACCACATGGATTATGATGAGTTTAGAGTCGAAGAATTAC
CTTGCTTAAG---------------TCTAGGAATAACAGCAAAGAGAGTGAGTACTCTGCAGAGGCTTTTTGATGTACCT
GGAGTCCACTTGAGATGCCTTGGTTTATATGAATTGAATGGAGAGAGATCTCTTACACTCACCTTAACAGAAAGTATTTT
TGTTCTGAATGTAATGGGCTATTCTGATTTAGAGGACTTCTGCATTATGAACA-------AGCCGCAATGTTATGGAGAC
CATCTTTCGAGGCTGGAGTTCCTGACCTTTTGGGATCTTCCTCGACTTGAGAAGATTAGTATGGAGCATCTTCAGAACCT
-------------------------TCGTGTCCTTACGGTGGGGAGAACTTATCAACTGGTAGACC---TGACCTGCATT
TTAAAGCTACCATATCTGGAGCA-TTTGAATGTGTCTTGCTGTGATAAA-TGAAGCAGTTGGTTGATATACAGAATGTTA
TTGACACGGAAGGAAGATATCAAGTACCGATTCAAGCATTTCGGCAACTAAGAATTTTGCAATTAAATTCGTTGCAAAGC
TTGGATAGATTATGTAATT----CTAAATTGGATTTTCCTTCTTTGGAATACATTGATGCGTTTGCTTGCCCACGAATGA
AGAAACTACCTTTTGGGCAAATGGGTAAACTGAAGAGCATCAGAGGGGAGCAAACATGGTGGGATAATCTCGAGTGGGAT
GACGAAAGCAGTTTCTTGCCATTGTTGCCATTTTTTAAATCATCAGAAATTTGCTCGGCATCCTTTAGGCCAGAGTTAGA
TGCTACTGTGATATCCTCCTCGCCGAAAGCTTTCTTCACCAAGAGGCAGCCCATCTTGAATTCGTCAGTACGATTCACAT
CCTATCCACAATCAATTTTTGAAACAGAGGAATTCGATGGGCATATGAAGATGGAATAGTTTCACCACTATCATCTATCA
ATACTTCTCCAGAACCACACATTGTCTTTCATTAGCTGCTCAAGGTATGTTTTTT-GGTACTTCACAATT----------
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>chr3A_2564
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----ATGTGCAATCATATCACTCAATTCCCTCAAGGCCATGAGCTGTCCGAACCTGCAGTTTCTGTCACTACAGCAGAAC
TTTCGGCTGAAGGTGATACCACCATCTTTTTTAAACGGCATATTATCCGTGACCTACTTGGATTTGTCTTGGGTTCCCAT
CAAGGATCTTCCAGAAGAAATTGGCAGGCCGACTGAATTGCAGTGTTTCAAACTGAAGCAAACACACATTAAACTATTGC
CTGTAGCTATTGGGCAATTAAGAAAGTTGAGGTTCTTGGACTTGAGCTATATGGATTTCTTGGAGAAGATACCTTATGGT
GTTCTTACAAATTTGTCAATGCTACAAGTTTTAAACCTATATGGCAGCAGGTATGCCGGACGTGAATCAGATTTTGATTC
AGAGAACCACATGGGTTATGATGAGTTTAGAATCGAAGAGTACCACATGGGTTATGATGAGTTTAGAATCGAAGAGTTAT
CAGGATTAACTAGAGAACTAAAAGTTCTAGGAATAACAACAAAGAAAATGAGTACCCTGCAGAGGCTTTTTGGAATACCT
GGAATCCGCTTGAGATGCCTTGGTTTATATGAATTGAATGGAGAGAGGTCTCTTACTCTTAATTTACCGGAAAGTATCGT
TATTCTGAATGTAATGGGCTGTTCTGATTTGAAGAACTTATGCATTGTTAACAACTAACAAGCCACAGAGTTATGGAGAA
CGCCTTTCGAGGCTGGAGTTTCTCACCTTTTGGGATCTTCCTGGACTTGAGAAGATTAGCATGGGACATTTTCAGAACCT
-------------------------TCGTGAGCTTACTGTGGGGAGAACTTATCAATTGGTAGACC---TGTCCTTCATT
TTAAAACTACCATATCTGGAGCATTTTGAATGTGTCTTGGTGCGATAAAATGAAGCATTTAGTTGATCTAGAGAATGTTA
TTAACTTGGAAGAAAGATATGAAATACCTATTCAGGGATTTCGTCAACTAAGAATTTTGCAGTTAAATTCATTGCGAAGC
TTGGGCAGATTATGTAAATAATCCTAAATTGGATTTTCCTTCTTTGGAATACATTGATGTGTTTGGTTGCCCGAAGATGA
AGAAACTACCTTTTGGGCAAATGGGTAAACTGAAGAGGATCAGAGGGGAGCAAACATGGTGGGATAATCTCGAGTGGGAC
GACGAAAGCAGTTCCTTGTCACTGTTGCCGTTTTTTAAATCATCAGAAATTTGCTCGGCGTCCTTTAGGCCAGAGCTAGA
TACTACTGTGATATCCTCCTCGCCGAAAGCTTTCTTCACCAAGAGGCGGCCCATATTGAATTCATCAATACGGTTCACAT
CATATCCGCAATCATTTTTTGAAACAGAGGAGTTTGATGGGCATATGACGATGGAATAGTTTCACCAATATCATCTCTCA
GTACTTCTCCAGAGCAACACATTGCCTTTCAATAGCTGCTCAAGGTA---------------------------------
--------------------------------------------------------------------------------
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>chr3B_2564
--------------------------------------------------------------------------------
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----ATGTGCAATCATATCACTCAATTCCCTCA-GGCCATGAGCTGTCCGAACCTGCAATTTCTGTCACTACAGCAGAAC
TTTCAGCTGAAGGTGATACAACCATCTTTTCTAAATAGCATATCATCCGTGACCTATTTGGATTTGTCTTGGGTTCCCAT
CAAGGATCTTCCAGAAGAAATTGGCAGACTGACTGAATTGCAGTGTCTCAAACTGAAGCAAACACACATTAAACTATTGC
CTGTAGCTATTGGGCAATTAAGAAAGTTGAGGTTCTTGGACTTGAGCTATATGGATTTCTTGGAGAAGATACCCTGTGGT
GTTCTTACAAATTTGTCAATGCTACAAGTCTTAAACCTATATGGCAGCAGTTATGCCGGACGCGAATCAGATTTTGATTC
AGAGA------------------------------------ACCACATGGGTTATGATGAGTTTAGAATCGAAGAGTTAT
CAGGATTAACTAGAGAACTAAAAGTTCTAGGAATAACAACAAAGAAAATGAGTAACCTGCAGAGGCTTTTTGGAATACCT
GGAATCCGATTGAGATGCCTTGGTTTATATGAATTGAATGGAGAGAGGTCTCTTACTCTTAATTTACCAGAAAGTATCGT
TGTTCTGAATGTAATGGGCAGTTCTGATTTGAAGGATTTATGCATTGT-------TAACAAGCCACGAAGTTATGAAGAG
----------------------------------------------TTGACAAGATTAGTATGGGACATTTTCAGAACCT
TTTCAAAAAAAAAATTTCAGAACCTTCGTGAGCTTACTGTGGGGAGAACTTATCAACTGGTAGACGACATGTCCTTCATT
TTAAAACTACCATATCTCAACCA-TTTAAATGTGTCTTGGTGCGATAAAATGAAGCATCTAGTTGATCTAGAGAATGTTA
TTAACATGGAAGAAAGATACGAAATACCTATTCAGGGATTTCGTCAACTAAGAATTTTGCAGTTAAATTCGCTGTGAAGC
TTGGGCGGATTATGTAATC----CCAAATTGGATTTGCCTTCTTTGGAATACATTGATGTGTTTGCCTGCCCGAAGATGA
AGAAACTACCTTTTGAGCAAATGGGTAAACTGAAGAGGATCAGAGGGGAGCAAACATGGTGGGATAATCTCGAGTGGGAC
GACGAAAGCAGTTCCTTGTCACTGTTGCCGTTTTTTAAATCATCAGAAATTTGCTCGGCATCCTTTAGGCCAGAGTTAGA
TACTACAGTGATATCCTCGTCCCCGAAAGCTTTCTTCACCAAGAGGCAGCCCATATTGAATTCATCAATATGATTCACAT
CATATCCGCAATCATTTTTTGAAACAGAGGAGTTTGATGGGCACATGCCGATGGAATAGTTTCACCAATATTGTCTATCA
GTACTTCTCCAGAACAACACATTGCCTTTCAATAGCTGCTCAAGGTATGCCACTTTTATACTACAGCATAGGTCG-----
------ATCAATTTTTTCAATATTAGCCATATGCAGTCACGCT-----GCTCTGTTCTATTATCTTCTGACTCTAGTTTC
ATGATCTTGTTTGTTTTTGT-TTGACTGGTTC-----------------------TACGAAATGCAAGGTGTGCCTTTTG
AGTAAAGCGTACCGTTAGTCGCTGAAGTGTTGGTCTAGACGATATGTTGTTTAATACGAGTCTTCTAAATAAAATAGAAT
CCGTGGACCAAGTCCGGTGTGTGTTTGATCTTGTTCTAGTTTTTGGTCTTTATCCCTTTCACTCGAAGTCTTGTTACTTG
TTAGGCATCTGAAGCTACATGTGCTTTTGCATGACTATTGTGAGTTGTGAATACTGGTTAGATGGAGCTCTGGCTGGTTT
TTGCTAGAAGTGAATAGATCATATGCATTACTTTTCATCATCTGAGGACTGGTGGTGGTTGTTTTTGAGTTCTTTTCCTG
TGATTTAGGTGTCAACTTTTTCTCTATTGCCAAGTTTTGGCCTGCTTATAGTTATAACAACCATACTACATTAAATTCTG
TTTGTGCCTGTGTGTTATGGAGCATGTGGAAACACAGAAATTCTCATGTCTTTGATGATACTTACTGGATTGACATGAAG
CAGATATGGTGGCTAGTCCTTGGGACAATGAGAAAATGGGAAATCCTCTTCAAGGAAGATGCTCTGTTAAAAGTGGAGGA
ATTCTGTCAAAGAGTGTCTTGTGTACTCAAGACCCCTTTCCAGATTACTGTGCGGCGAAAGCTGTTAACAGAAACACTGA
GGGTGTTTTCAGTCAAAGTGCTGCTCACCAAACTGAATCTGGGAGGAACTCCTGTTGACAATAGCGCATTGCTGGCTCCT
ACCTCACCTCCAAGAAGCCCAGGGAAGTGGTTCATCAAGCATTCGATACCCAGCTCAGTCACGGCGCTAGAGCTGCCTTG
CTCTCTGGTCCAGCCGAAGAAGAAACTCAGAAAGGTAGACTACAGAATGTGCATTGTTCCTGGCTGCCTGAGTAGCATCC
TCTACATGTCTCCCTAAACTGCTCTGTTTTCGAGTAGTTGCTGCATCTGTAATAAAGTTAGATGGATTGTGACTTTGACA
TTTCCTTGGTTTGTAGTTTTTGCTGGACATGCTCTGCATGATGCATCGTTTGCCCTCCTGGTAGTCTAAAAATCGTTACC
GAAATGTAAGGTGAGCATTTTGAGTTGCTGAAGCCGTGAAGCGTGAACGACATGTGCTTTAATATGAATCTTCTAAATAA
ATTAGCATCCCTTTGGACCAAGTCAGGTGTGTGTTTGACCTTGTTCTAGTTTTCGGTCTTTGTCCCTTTCATTCGAAGTC
TTGTTAGTCATCTGAAGCTACCTGTACTTTTCGATGATCATTGTGAGTTGTGAA--------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>SNPs
SSSS-S-S-SSSSSSSSSSSSSSSSSSSSSS---------------------------------S------------SSS
S--SSSSSSS-S-SSSS-SSS-S--SSSSSSSSS-SS---SSS-SSSSSSSS-S-SSSSSSSSSSSSSSSS-S-SS-SSS
SS-SS-SSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-----S------S------------S--S--------------------SS--------------------------
----S-----------------------------S---------------------------------------------
----------------------------------------S-----------------------------S---------
-------------------------------------------S---------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------S-----SS--------------------------------S-
------------------------------------S--S----------------S------------S--S-------
--------------S-S--------------------S-----S----------------------S-------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
-----------------------------------------------S-------------------S------------
--------------------------------------------------------------------------------
---S--------S----------S---------------------------------S----------------------
--------S---------------------------S-S-----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
---S---------S----------------------------------------------S-------------------
-------------------------------------------------------------------S------------
--------------S---S-------------S-----------------S--------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S----------------------------S-------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------S-----------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------S----------S---S----------------------------S------S--------------------
----------------------------S------------------------------S--------------------
-----------S----------------------------------------------S-------------S-------
-------S---------------------------------------------S--------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--SSS---------------------------------------------------------------------------
--S-----------------S--------------------------------------S-----S---------S----
--S------------S----S-----S-----------------------------------------------------
--------------------------------------------------------------------------------
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---------------------S-SS-------------------------------------------------------
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------------------------------------S-----------------S-S-----------------------
-----S------------------------------------------------------SSSSS---------------
--------------S----------------------------------------S------------------------
---------------------------------S-----------------------------------S----------
--S---S----------S--------------S-----S---S---------S-S----S-SS--S--------------
-------------------------------------------------------------S-----------S------
-----------------------S-------------------------------S------------------------
---SSS----------------S-------------S-----
>forward_547
--------------------------------------------------------------------------------
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-----------------------------------------------CCTACCCTTGACAGATCGCC-------------
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>reverse_2123
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------------------------------------------CCGCATTCATGAGATCCCAA------------------
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>forward_551
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------CCCTTGACAGATCGCCACAT---------
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>reverse_2381
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------------------------------------------------------------AGAAACCGGCTACTTGGAAG
A-------------------------------------------------------------------------------
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>forward_715
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-------------------------------------------------------GGACCTGCAGACGTTCCTTT-----
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>reverse_2531
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--------------------------------------------------TGAAACATTTAGGTCGGCCAGA--------
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>forward_1304
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----GAAGGGCCCAGTCTTTCAGT--------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2937
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--------------------------------------------------------TGGCCGCGAAGCAGATTTT-----
--------------------------------------------------------------------------------
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>forward_2763
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-----------------------GCATGCTGGTTGAACTCCAA-------------------------------------
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>reverse_5723
--------------------------------------------------------------------------------
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------------------------------------------TGAAAGATCCACCACCGCTC------------------
--------------------------------------------------------------------------------
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------------------------------------------
