>input_sequence_26481
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-------------------------------------------------------------------------------A
TGAGCAGCCACCGCAAGAACTTCCGCCGCCGCGCGGACGACGACGACGACGGGGGCAAGGCCGAGGAGGCCGGCCCCGCG
AGCAGGCCCGCCGCCAAGGCCCAGCCCCCGCCCAA---------GCCCAGGCCGCAGGGCGCCAGCCGCCTCAGCTTCGC
CGACGACGAGGAGGACGAGGACGACGCCGAGGAGGGGCCCTTCGCGCAGCAGC---GGAGCCGCCGCCCGTCCGCCTCGG
TGCGCCAGGCGCGCACGGCCTCCCCGGCCGCGGCGGCCCTCCACCGCGTCACGCCCGCCAGGGACCGGGCCCGGAGCTCG
CCGGCCGTCGC------------CGCCGCGGCTCCCGCGCCCAAGCCGTCCAACTTCCAGAGCCATGCTGGCGAGTACAC
CCCCGAGCGCCTCCGGGAGCTCCAGAAGAACGCGCGCCCGCTCCCTGGGAGCCTCATGCGGGCTCCGGCGCCGCCTCCTC
CCCCTCCTCCGGCGGCGGCTGAGTCCCGGCACCAGCGGCTGGCTGGAGCTGCGGCCAGCACCTCGTCTGGTCCCACCGCT
GCCGGTAAAGCAGCTCCGGCGGAGCCAGTGGTTGTTCTCAAAGGTCTGGTGAAACCTATGGCACAGGCCAGCATTGGGC-
--CACGGAGACCATTGCCGAACGAGGTTGAAGATAATGTTTCTGAAGAGGAGGCCGAGGATGATGGAGAAGATGAGGACA
AAGGGCCACTGATACCTGATAAGGCGACTATCGAAGCCATCCGGGCAAAGCGGCAGCAACTGCAACAGCCGAGGCATGCG
GCGCCTGATTTCATCTCCCTTGATGGTGGCGGTGTGCTCAGCAGCAGGAGGGACGCGGCTGGCGGGTCCAGCGATGAAGA
GGACAATGAGATGGAGGGTAGGATTGCCATGTACTCTGAGAAGACGAGTGATGGCCAGAGGAGCTCAAAAGGAGTGTTTC
AGGGGATCAATAATAGGGGCCCTGCTGCCAGTTTGGGGGCTATGAAAGATAGGTTTATGGAGGTTGAGGATGATGAGGTT
GATGACGAGGAGGAGGAAGAAAGGAAGTGGGAGGAAGCGCAGGTCAAAAAGGCGCTTGGTAATAGGATGGACGATTCTTC
TGCTCAGAGAGCAACGAACGGTGTTTCGGCTGCGAGGCAGCAGGTTCAGCCGCAGCCGTCTGGGTACTCGGGGGGTCCTC
ATTATCAGCCCTCCTTTAGCGGGGTTGTGCCTGGGGCATCTGTTTTTGCATCGGGTAGTGCAGAGTTCTTGTCCATCTCT
CAGCAAGCTGATGTAGCAAGCAAAGCCCTGCAGGAGAACATCAGAAAGCTCAAGGAAAGCCACAAGACAACAGTTGATTC
TTTAGCGAGGACCGACACACATCTAAATGAAGCCCTTTCAGAGATTTCCAGCCTGGAGGGTGGCTTGCAGGATGCAGAGA
AGAAGTTTGTGTATATGCAGGAGCTCCGGAACTATATTTCTGTCATGTGTGATTTCTTGAATGATAAGGCATTCTTCATA
GAGGAGCTGGAGGAGCACATGCAGAAACTGCATGAAAATCGGGCACTGGCTGTTTCAGAGAGGCGGGCTGCCGATTTTGC
TGATGAGTCAGGTGTGATTGAAGCTGCGGTGAGTGCAGCAATATCTGTTCTTAGCAAAGGACCGAGCTCAGCTAATCTGT
CTGCTGCATCGCATGCTGCACAAGCAGCAGCAACTGCTGCCAGGGAAAGCGCTAACCTACCACCGGAGCTGGATGAGTTT
GGCAGAGATATCAACCTCCAGAAGCGTATGGATCTTAAGCGCAGGGAAGAGAACAGGAGGCGAAGAAAAGCTCGATCCGA
ATCCAAAAGATTGTCTTCTGCAAGAAAGAGTGCTACTGAGCACATTGAAGGTGAGCTAAGCACTGATGAGAGTGACACCG
ACACCAGTGCTTACCTGTCCAGCCGTGATGAGTTGCTCAAGACTGCTGATGCTGTATTCAGTGATGCTGCAGAGGAATAC
TCGAGCCTTACAATTGTCAAGGACAAATTTGAAGGCTGGAAAACACAATATCCTTTGGCCTACCGAGATGCTCATGTGTC
ACTAAGTGTGCCATCTGTGTTTACCCCGTATGTGAGGCTGGAGCTTCTGAATTGGGACCCTCTCCATGAAACAACTAGTT
TCTTTGACATGCAGTGGACTAACGTTCTTGTGGGTTATGGAGTGCAAGATGAAGACAGTGCTGACCCTAATGATCTAGAT
CTGAACCTCATTCAAGTTCTAGCGGAAAAGGTAGCCCTTCCTGTCCTGCACCACCGTATTAAGCACTGCTGGGACATTTT
GAGCACGCAAAGAACACAACATGCTGTAGATGCAACTTTTATGGTGATTAACTATGTGCCGGTAACAAGCAAGGCTTTGC
ATCAACTGCTGGCGACGGTGTGTAGTCGTCTGACTGAGGCAATTGCTGACGTGTCAGTACCAGCCTGGGGATCAATGCTG
ACAAGGACTGTGCCAGGTGCTGCTGAGTATGCTGCATACAGATTCGGAGTGGCCACACGGCTGCTTAAAAATGTGTGTCT
GTGGAAAAAGGTCCTTGCAGTAGATGCCCTGGAGAAACTTGCTCTAGAAGAGCTATTGATAGGAAAGATTCTTCCTCATA
TGAAAAGTATCATTCTGGAAGTCCATGATGCGGTCACAAGGGCCGAAAGGATAGCCGCATCACTTTCAGGAGTCTGGTCT
TCACCAAACAAGAAGCTGGAGCCTTTCACAGATTTCGTGTTGGAACTATCAAACAAGCTCAAGAGTAGACACATTTCAGG
CGTTAGTGAAGAAGAGATACGTGGGCTGGCTCGTCGTTTGAAGAACATATTGGTGGCGCTGAACGAGTACGATAAGGCTA
GAAATATTTTGAAGACCTTCCAAATCAGAGAAGCTCTCTAG---------------------------------------
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>chr4A_1_TraesCS4A01G324500
TCCTTGTGAGCTCCAACCGGCGTAAGCACAGTAACACCAATGTGTGTGGGGGGGCAAGGCGCAGTTGTCGGTAAAATGAA
GGACAGGGTGCTGTTCCTAACCACCTCAGATCGCATGCCCTTGTAACAATTTAACCAACCTACACCAGCAATTCTCAGTT
TACAGAAGATCAATTAGGCGG------------------------GCCGGATGACACCAGCAGCTCAGCGCCCACTGGCG
AGAATCACTAATTGTAACACCTAATCAA----------ACCAGGGGGCTGACCACTCCGCAGCAGAATCGCGTCACACGT
CTCACCAAATCGTCTCAGGTCGAAGCTACACAGCACCATGCGGATCAAATCTACTACTAGTCATTATCACACCGGGGACG
GCCACGGGGGGAGGAGGCGGTGGGTGGGGGGGAACCTGAGACGGCGCGCGGGGGCGC---------GG------------
AGCAGTGGCGGAGGAGGATCCCGCGGAGGGAGGACGCCGACGCGGATCGCAGCCTCGCCGTCGCCATGGGAGATTTAGCT
AGCTAGGGTTTGCGCGGCGAGAAGAGTCGTCCGTGGGGAGTGGTGGTGTTCTGGAAGCAGGGGAAATGAGAATGACG---
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-----------------ACGCTCTGGCCAGGCCTGGGCTCAACTTTTTTTTTTTTGAGAAAAAGGCCTGGGCTGAACTGA
GCCTGGCTATATGGGCTATGAACGGCAAGCAGGCAGCCGGCTCCTTACCGGGTCTGAGAGCCTGGCTATATGGGCTGTCA
GCTGGGCTGGTAGCAGGCCAAGTCTGAGAGAGAGCCCAGCACGACATGAAGCCGGTTCCTTGCCGGGTCCGGACCCTACT
TGGACTCTGGTTTTCTTTTGCTGGCCTACTCTCTATCTCT----CACCCGGATCTCCTCGACGCGCCGCGCCGGAACCCT
AGCC---GCCCACCGCCGGTGAGATCCCCGCGCCCTCAGCCTAGCTACCAACTTCAAATCCAAGCCTTCTCCATCCACCC
CCCCTCCC-CCCGCCTGACCCGGTTCCGCCTCGCGGTG------------------------------------CCGGGA
TGAGCAGCCACCGCAAGAACTTCCGCCGCCGCGCGGACGACGACGACGACGGGGGCAAGGCCGAGGAGGCCGGCCCCGCG
AGCAGGCCCGCCGCCAAGGCCCAGCCCCCGCCCAA---------GCCCAGGCCGCAGGGCGCCAGCCGCCTCAGCTTCGC
CGACGACGAGGAGGACGAGGACGACGCCGAGGAGGGGCCCTTCGCGCAGCAGC---GGAGCCGCCGCCCGTCCGCCTCGG
TGCGCCAGGCGCGCACGGCCTCCCCGGCCGCGGCGGCCCTCCACCGCGTCACGCCCGCCAGGGACCGGGCCCGGAGCTCG
CCGGCCGTCGC------------CGCCGCGGCTCCCGCGCCCAAGCCGTCCAACTTCCAGAGCCATGCTGGCGAGTACAC
CCCCGAGCGCCTCCGGGAGCTCCAGAAGAACGCGCGCCCGCTCCCTGGGAGCCTCATGCGGGCTCCGGCGCCGCCTCCTC
CCCCTCCTCCGGCGGCGGCTGAGTCCCGGCACCAGCGGCTGGCTGGAGCTGCGGCCAGCACCTCGTCTGGTCCCACCGCT
GCCGGTAAAGCAGCTCCGGCGGAGCCAGTGGTTGTTCTCAAAGGTCTGGTGAAACCTATGGCACAGGCCAGCATTGGGC-
--CACGGAGACCATTGCCGAACGAGGTTGAAGATAATGTTTCTGAAGAGGAGGCCGAGGATGATGGAGAAGATGAGGACA
AAGGGCCACTGATACCTGATAAGGCGACTATCGAAGCCATCCGGGCAAAGCGGCAGCAACTGCAACAGCCGAGGCATGCG
GCGCCTGATTTCATCTCCCTTGATGGTGGCGGTGTGCTCAGCAGCAGGAGGGACGCGGCTGGCGGGTCCAGCGATGAAGA
GGACAATGAGATGGAGGGTAGGATTGCCATGTACTCTGAGAAGACGAGTGATGGCCAGAGGAGCTCAAAAGGAGTGTTTC
AGGGGATCAATAATAGGGGCCCTGCTGCCAGTTTGGGGGCTATGAAAGATAGGTTTATGGAGGTTGAGGATGATGAGGTT
GATGACGAGGAGGAGGAAGAAAGGAAGTGGGAGGAAGCGCAGGTCAAAAAGGCGCTTGGTAATAGGATGGACGATTCTTC
TGCTCAGAGAGCAACGAACGGTGTTTCGGCTGCGAGGCAGCAGGTTCAGCCGCAGCCGTCTGGGTACTCGGGGGGTCCTC
ATTATCAGCCCTCCTTTAGCGGGGTTGTGCCTGGGGCATCTGTTTTTGCATCGGGTAGTGCAGAGTTCTTGTCCATCTCT
CAGCAAGCTGATGTAGCAAGCAAAGCCCTGCAGGAGAACATCAGAAAGCTCAAGGAAAGCCACAAGACAACAGTTGATTC
TTTAGCGAGGACCGACACACATCTAAATGAAGCCCTTTCAGAGATTTCCAGCCTGGAGGGTGGCTTGCAGGATGCAGAGA
AGAAGTTTGTGTATATGCAGGAGCTCCGGAACTATATTTCTGTCATGTGTGATTTCTTGAATGATAAGGCATTCTTCATA
GAGGAGCTGGAGGAGCACATGCAGAAACTGCATGAAAATCGGGCACTGGCTGTTTCAGAGAGGCGGGCTGCCGATTTTGC
TGATGAGTCAGGTGTGATTGAAGCTGCGGTGAGTGCAGCAATATCTGTTCTTAGCAAAGGACCGAGCTCAGCTAATCTGT
CTGCTGCATCGCATGCTGCACAAGCAGCAGCAACTGCTGCCAGGGAAAGCGCTAACCTACCACCGGAGCTGGATGAGTTT
GGCAGAGATATCAACCTCCAGAAGCGTATGGATCTTAAGCGCAGGGAAGAGAACAGGAGGCGAAGAAAAGCTCGATCCGA
ATCCAAAAGATTGTCTTCTGCAAGAAAGAGTGCTACTGAGCACATTGAAGGTGAGCTAAGCACTGATGAGAGTGACACCG
ACACCAGTGCTTACCTGTCCAGCCGTGATGAGTTGCTCAAGACTGCTGATGCTGTATTCAGTGATGCTGCAGAGGAATAC
TCGAGCCTTACAATTGTCAAGGACAAATTTGAAGGCTGGAAAACACAATATCCTTTGGCCTACCGAGATGCTCATGTGTC
ACTAAGTGTGCCATCTGTGTTTACCCCGTATGTGAGGCTGGAGCTTCTGAATTGGGACCCTCTCCATGAAACAACTAGTT
TCTTTGACATGCAGTGGACTAACGTTCTTGTGGGTTATGGAGTGCAAGATGAAGACAGTGCTGACCCTAATGATCTAGAT
CTGAACCTCATTCAAGTTCTAGCGGAAAAGGTAGCCCTTCCTGTCCTGCACCACCGTATTAAGCACTGCTGGGACATTTT
GAGCACGCAAAGAACACAACATGCTGTAGATGCAACTTTTATGGTGATTAACTATGTGCCGGTAACAAGCAAGGCTTTGC
ATCAACTGCTGGCGACGGTGTGTAGTCGTCTGACTGAGGCAATTGCTGACGTGTCAGTACCAGCCTGGGGATCAATGCTG
ACAAGGACTGTGCCAGGTGCTGCTGAGTATGCTGCATACAGATTCGGAGTGGCCACACGGCTGCTTAAAAATGTGTGTCT
GTGGAAAAAGGTCCTTGCAGTAGATGCCCTGGAGAAACTTGCTCTAGAAGAGCTATTGATAGGAAAGATTCTTCCTCATA
TGAAAAGTATCATTCTGGAAGTCCATGATGCGGTCACAAGGGCCGAAAGGATAGCCGCATCACTTTCAGGAGTCTGGTCT
TCACCAAACAAGAAGCTGGAGCCTTTCACAGATTTCGTGTTGGAACTATCAAACAAGCTCAAGAGTAGACACATTTCAGG
CGTTAGTGAAGAAGAGATACGTGGGCTGGCTCGTCGTTTGAAGAACATATTGGTGGCGCTGAACGAGTACGATAAGGCTA
GAAATATTTTGAAGACCTTCCAAATCAGAGAAGCTCTCTAGCTAGTTGTTCCCTTGACATAGAACAAGAATTCCATTTTT
GTTTGAAGGCGGCAAGCAGGTTCGATATCCTTTTGGTTCACGGGAATGTTGTAATGTCTAATTATCTCTGTACATCAAAT
GATCATGAGTACCTAGTCCAATCTTACAGTTACATGCATG--------------TTGGTGCAATTTTCATGGTGCTTCTG
GATTTCAGGAATCATTGTCTTTCTCAGTAATGGCCAACGTCAGTTAACTGACTGATAAGGCATATATATGTCCAGCACTT
TTCTGCATTACATTATTATTACTGGACATCTTTCATGCAAGCTTGCTTTTGTGTGTTATGAAGTTTTGGACCATTCTGAT
AAGAGTTTGGCTTTGGCTCATGCCAGTCAACTTACATTCCTTGATATAGTTTGATAAGCCAGCTTGGTAAAATAGATCGG
ACTTTCAGACATGAGCTGTGGGTCCTAGTCCTAGCATTTATGGAAATGGCTTTATGTTTAGTCCAGGTCTGGGGAAGTGG
GGCATGCAAAATACACAATTCTTGGAGTTGATTATCCGATGCCTGGTTTCCCAAAGATGTTGACTATCATCAATTCTCAT
CTTCTGTTAGGCACATGTTTGCTGTTTCCCCACTGATAATAAAAAGATACCGCAACAAGCTTCTCCTCACATCTGATGTT
GAATGATGTTTTTTCTTGTGTGCCGCTGACCCAGGAGCAGTTTGCAGTGGCCACCAGCAACCCTGTGTGCCTGCCTG---
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---------------------------------------------------------TTTTGCTGCTGGCAGCCTGATGA
TATTCTCCCACGCCACACTTGTGACTCTGTTAATTCCTGCATTGCATACAAGACCATGCATGGCATCCTGCTACCGCTGA
ATACAGTTCTTGTGAATCAAAGATGATACTAAAGGGCTAGAAATGCATCTTGAAGACCTTCCGAAACAGAGAAGCTTGCT
AGCTAGTTTTTCCTTGACATGGTACATGAATTGCATTTGGTTCCGAATCCGTTTCAATCTAGAGATTCGATGTTC
>chr5B_1
TCCTTGTGAGCTCCAACCGGCGTAAGCACGGGGGGCAATGAT--------------------------------------
GGACAGGGTGCTGTTCCAAACAACCTCAGATCGCATGCCCTTGTAACAATTTGACCAACCTACAGCAGCAATTCTCAGTT
CACAGACAACAGAGGTCCACAGGTGATGAATCAATCAATCAATCAGCCAGATAACAGCAGCAGCTCAGCGCCCACTGGTG
CCAATCAGTAATTGTAAGTTTGTAACACCTAAGCGCCCACTAGGAGAGCGACCACTAGGCAGCAGAATCGCGTC------
---ACCAAATCGCCTCAGCTCGAAGGAACGCAGCACCGCGCGGATCAAATCTAGC------CACTGCTACACCGGGGGCG
ACCATGGGGGGAGGAGGCGGTGGA----GAGGAACCTGAGACGGCGCGCGGGGGCGCACCGGCGGCGG------------
ACGAGTGGCGGAGCAGGATCCCGCGGAGGGAGGACGCCGACGCGGATCGCAGCCTCGCCGTCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNACGCTCTGGCCGGGCCTGGGCTCAACTCGGCCT-AC---------------------------
--------------------------------------------------------------------TATGGGCTGTGA
ACTGGGCCAGTAGCAGGCCGAGTCTGACACAAGGCCCAGCACGACAAGCAGTCGGTTCC-----------GGACCCTACT
TGGCCTTTGGTTTTCTTTTGCTGGCCTACTCTCTATCTCT----CACCCGGATCTCCTCGCCCCGCCGCGCCGGAACCCT
AGCCGCCGCCCACCGCCGGTGAGATCCCTGCGCCCTCATCC--GCTAGAAACTTCAAATCGAAGC----TCCAG------
CCGCTCCCTCCCGCCTGACCCGGTTCCGTGGACTTGCTAGGTTTCGCCTCCTGTCGCGGGGCCGAGCCGAGCGACCGGGA
TGAGCAGCCACCGCAAGAACTTCCGCCGCCGCGCGGACGACGACGACGACGGGGGCAAGGCCGACGACGCCGGCCCCGCG
ACCAGGCCCTCCGCCAAGGCCCAGCCCCCGCCCGCGCCTCCCAGGCCCAGGCCGCAGGGCGCGAGCCGCCTCAGCTTCGC
CGACGACGAGGAGGACGAGGACGACGCCGAGGAGGGGCCCTTCGCGCAGCAGC---GGAGCCGCCGCCCGTCCGCCACGG
TGCGGCAGACACGCACGGCCTCCCCGGCCGCCACGGCCCTCCACCGCGTCACGCCCGCCAGGGACCGGGCGAGGAGCTCT
CCGGCCGTCGCGGCGGCGGCGGCCGC------TCCAGCGCCCAAGCCATCCAACTTCCAGAGCCATGCTGGCGAGTACAC
CCCCGAACGCCTCCGGGAGCTCCAGAAGAACGCGCGCCCGCTCCCTGGGAGCCTCCTGCGCGCTCCGGCGCCTCCTCCTC
CCCCTCCTCCGGCGGCGGCTGAGTCCCGGCATCAGCGGCTGGCTGGAGCTGCGGCCAGCACCTCGTCTGCTCCCGCCACT
GCCGGTAAAGCACTTCCCGCGGAGCCAGTGGTTGTTCTCAAAGGTCTGGTGAAACCTATGGCACATGCCAGCATAGGACC
ATCACGGAGACCGTTGCCGAACGAGGTTGAAGATGATGATTCTGAAGTGGAGGCGGAGGATGATGGGGAAGATGAGGAGA
AAGGGCCGCTGATACCTGATAAGGCGACGATCGAAGCCATCCGGGCAAAGCGGCAGCAACTGCAACAGCCGAGGCATGCG
GCGCCCGATTTCATCTCCCTTGATGGTGGCGGTGTGCTCAGCAGCAGGAGGGATGCGGCTGGCGGGTCCAGTGATGAAGA
CGACAACGAGATGGAGGGTAGGATTGCCATGTACTCTGAGAAGACGAGTGATGGCCACAGGAGCTCAAAAGGAGTGTTTC
AGGGGATCAATAATAGGGGCCCTGCTGCCAGTTTGGGGGCTATGAAAGATAGGTTTATGGAGGTTGAGGATGATGAGGTT
GATGATGAAGAGGAGGAAGAAAGGAAGTGGGAGGAGGCACAGGTCAAAAAGGCGCTTGGTAATAGGATGGACGATTCTTC
TGCTCAGAGAGCAACCAACGGTGTTTCGGCTGCGAGGCAGCAGGTTCAGCCGCAGCCATCTGGATACTCGGGAGGTCCTC
ATTATCAGCCCTCCTTTAGCGGGGTTGTGCCTGGGGCATCTGTTTTTGCATCGGGTAGTGCAGAGTTCTTGTCCATCTCT
CAGCAAGCTGATGTAGCAAGCAAAGCCCTGCAGGAGAACATCAGAAAGCTCAAGGAAAGCCACAAGACAACAGTTGATTC
TTTAGCGAGGACCGACGCACATCTTAATGAAGCGCTTTCAGAGATTTCCAGCCTGGAGGGTGGCTTGCAGGATGCAGAGA
AGAAGTTTGTGTACATGCAGGAGCTCCGGAACTATATTTCTGTCATGTGTGATTTCTTGAATGATAAGGCATTCTTCATA
GAGGAGCTGGAGGAGCACATGCAGAAATTGCATGAGAATCGGGCACTGGCTGTTTCAGAGAGACGGGCTGCCGACTTTGC
TGATGAATCGGGCGTGATCGAAGCTGCGGTGAGTGCAGCAATATCTGTTCTTAGCAAAGGACCAAGCTCAGCTAACCTGT
CTGCTGCATCGCATGCTGCACAAGCAGCAGCAACTGCTGCCAGGGAAAGCGCTAACCTACCACCGGAGCTGGATGAGTTT
GGCAGAGATATCAATCTCCAGAAGCGTATGGATCTTAAGCGAAGGGAAGAGAACAGGAGGCGAAGAAAAGCTCGGTCCGA
ATCCAAAAGATTGTCTTCTGCACGGAAGAGTGCTACTGAGCACATTGAAGGTGAGCTAAGCACTGATGAGAGTGACACCG
ACACCAGTGCTTATCTGTCCAGCCGTGATGAGTTGCTCAAGACTGCTGATGCTGTATTCAGTGATGCTGCAGAGGAATAC
TCGAGCCTTACAATTGTCAAGGACAAGTTTGAAGGCTGGAAAACACAATATCCTTTGGCCTACCGAGATGCTCATGTGTC
ACTAAGTGTGCCATCTGTGTTTACCCCGTATGTGAGGCTGGAGCTTCTGAATTGGGATCCTCTCCATGAAACAACTAGTT
TCTTTGACATGCAGTGGACTAACGTTCTTGTGGGTTATGGAGTGCAAGATGAAGATAGTGCTGACCCTACTGATCTAGAT
CTGAACCTCATTCAAGTTCTAGCAGAAAAGGTGGCCCTTCCTGTCCTGCACCACCGTATTAAGCACTGCTGGGACATTCT
GAGCACTCAAAGAACACAGCATGCTGTAGATGCAACTTTTATGGTGATTAACTATGTGCCGCTAACAAGCAAGCCTTTGC
ATCAACTGCTGGCTACGGTGTGTAGTCGTCTGACTGAGGCAATTGCTGACGTGTCAGTACCAGCTTGGGGATCAATGCTG
ACAAGGGTTGTGCCAGGTGCTGCTGAGTATGCTGCATACAGATTCGGAGTGGCCACACGGCTGCTTAAAAATGTGTGTCT
GTGGAAAAAGGTCCTTGCAGGTGATGCCCTGGAGAAACTTGCTCTAGAAGAACTATTGATAGGAAAGATTCTTCCTCATA
TGAAAAGTATCATTCTGGAAGTCCATGATGCGATCACAAGGGCCGAACGGATAGCTGCATCACTTTCAGGAGTCTGGTCT
TCACCAAACAAGAAGCTGCAGCCTTTCACAGATTTCGTGTTGGAACTATCAAACAAGCTCAAGAGTAGACACGTTTCAGG
CGTTAGTGAAGAAGAGATACGTGGGCTGGCTCGTCGTTTGAAGAACATATTGGTGGCGCTGAACGAGTACGATAAGGCTA
GAAATATTTTGAAGACCTTCCAAATCAGAGAAGCTCTCTAGCTAGTTTTTCCCTTGACATAGAACAAGAATTCTATTTTT
GTTTGAAGACGACAAGCAGGTTCGATATCCTTCTGGTTCACGGGAATGTTGTAATGTCTAATTATCTCTGTACATCAAAT
GATCATGAGTACCTAGTCCAATCTTG------CATGCATG--------------ATGGTGCAATTTTCATGGTGCTTCTG
GATTTCAGGAATCATTGTCTTTCTCGGTAATGGCCAACATCAGTTAACTGACTGATAAGGCATATTTATGTTCAGCACTT
TTCTGCATTA---TATTATTATTAGACATCTTTCATGAAAGCTTGCTTTTTTGTGTTATGAAGTTTTGGACCATTCTGAT
A-GAGTTTGGCTTTGGTTCATGCAAGTCAACTTACATTACTTGATATAGTTTGATAAGCCAGCTTGGTAAAATAGATCT-
ACTTTCAGACATGAGCGGTGGA------TCCTAGCATTTAAGGAAATGGCTTTATGTGCAATGGAAATCGCTCGCATGCT
AGGTGTGAGGTTGGTCTAGTAAACTTATTTAAGTTGCATGCTTTTGTTCTAGAATCTAGACATTGATTATTGCTCTGTGA
CTTATGTAGATATCATCTCTTTCACAAAAATATATGATTCTCTATTTCTTCTTAGCTTTAAACAAGAGAAATATACTACT
CCCTCCGTCCGGAATTTTAAACACGTCTAGATACATCCATTTCTGCGACAAGTAATTCGGCACGGATGGAGTATTATATC
TAATCTTTATTAAAAAAACATAGTTATGGTTAGTCAAGAATTTCACTTTTTAAGGCAGTATGTTCTAGATCCCTTTCAGT
TTACAAAAATATTGGAACATCTGATCATGAGTACCTAGTTCAATCTTGCATGCATGATGATATCCATGCAGTTTTAACGG
TCTTCTAGATTTCAGTAAAAAGAAAAATTGGGGTAATGGCCAGTGCCAGTTAACTGACTGAAAACACATACTGTATGTTT
ATCAATTTCCTTATTAGATTATTATTAGACATCTCTCATGTGTTATGTTTTGGACAGTTCTGCTAGAGTTTTGCTTTGGT
TCATGTTATCCAGCTTACATTCCTTGATATAGCTTGATAAGGCAGCTTTGTAAAATAGATCTGACATTCAGACATGTCGG
GGAAAATTCTACTAGCACTTGATGAAATGGCATATAAATGTAGAATGGAAATTGCAGGCATGCTAAGTGCTTGCTCTCGG
TAACGCTCTTTCTAAAAAAAAAAAAGGTTCTCTTGGCTTCAAACAAGAAATTTTTCGTATTTTTGGATATCCTCAGCCTG
GGTGTTTGTTAATCTTGGCATGTCTGTTTGGGAAATCTGACTTATTGTTGGGCTTCAATTCTATTCGGACGGTTTTTCCC
TGTCGTTGGATGTAAATTCGTATCATAATCGACATGGCCTGCTGTTTGTAAATTTTGGAGGCCAGCTGCTGAAGGTAGAT
CATCATCCTTCCCAATGTTGCAGCTGTTGAAGTGATCAAATCTTGTCTCCCCTGTGAAACCTTTTCCATGCCGATTGTGT
TTAGCAGTCCACGTTTGCTGGGCTCGTCTCTGTTATAATTGCACACATGTTCACCAGAGACTCTGTTCCTCGTGCAAACA
ATGTAAATAAGCAGGTAGCCTGTGAAAGTGCTTTTTTGATCCCTAGCTCACATGCTCCCTGATGACAGTAAATCCAAAAA
ATTAGTTTAAAAAAACTGATTTTTTTTGTGATAAACATTGATCAATGTTTTAATTGCCTGCAACTTTTTGCAATGAAATG
ACATTCGTGGAGGTCTGAGCAAAAGAAAAAAATCGATGCTCCAAAATGCTTCCAACTTTTTGCTATTGACAGCCTGATGA
TACTCTCCCACGCCACACTTGTGACTCTGTTCATTCCTGCATTGCATACAAGATCATGC---------------------
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---------------------------------------------------------------------------
>chr5D_181
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------G------------------------GCCAGATAACACGAGCAGCTCAGCGCCCACTGGTG
AGAATCACTAATTGTAACACCTAATCAA----------ACTAGGGGACTAACCACTAGGCAGCAGAATCGCATCACATGC
CTCACCAAATCGTCTCAGCTCGAAGCTACACGGCACCGCGCGGATCAAATCTAGC------CATTGCTACACCGGGGACG
GCCATGGGGACAGGAGAAA--------GGAGGAACCTGAGAAGGCGCGCGGGGGCGCACCGGAGGCGGCGGGTCCCGCGG
AGCAGTGGCGGAGGAGGATCCCCCGGAGGGAGGACGCCGACGCGGATCGCAGCCTCGCCGTCGCCATGGGGAGAAT---T
AGCTAGGGTTTTCGGGGCGGGCGAGAAGAGTGGTGGGGAGGAGCAGCAGGGGAAGGAG------AATGAGAATGACG---
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-----------------ATGCTCCGGCCGGGCCTGGGCTTAACTGAGCATAAC---------------------------
--------------------------------------------------------------------TATGGGCTGTGA
ACTGGGCCGATAGCAGGCCAAGTCTGAGAGAAGGCCTAGCACGACAAGAAGCCGGTTCCTTA------------CCTAGT
TGGACTTTCGTTTTCTTCCGCTCGCCGCCTCTATCTCTCGCACCCACCCGGATCTCCTCGCCGCGCCGCGCCGGAACCCT
AGCCG-------CCGCCGGTGAGATCCCGCGT-CCTCAGCCTAGCTACCAACTTCAAATCCAAGCCTTCTCCAG------
CCGCTCCC-CCTTCCTAACCCTGCTCG-----CTTGCCAGGTTCCGCCTCGCAGGGCCGGGCCGAGCCGAGCGGCCGGGA
TGAGCAGCCACCGCAAGAACTTCCGCCGCCGCGCGGACGACGGCGACGACGGGGGCAAGGCCGAGGACGCCGGCCCCGCG
ACCAGGCCCGCCGCCAAGGCCCAGCCCCCTCCCAA---------GCCCAGGCCGCAGGGCGCGAGCCGCCTCAGCTTCGC
CGACGAC---GAGGACGAGGACGACGCCGAGGAGGGGCCCTTCGCGCAGCAGCAACGGAGCCGCCGCCCGTCCGCCTCGG
TGCGCCAGGCGCGCACGGCCTCCCCGGCCGCCGCGGCCCTCCACCGCGTCACGCCCGCCAGGGACCGGGTGAGGAGCTCG
CCGGCCGTCGC------------CGC------TCCCGCGCCCAAGCCGTCCAACTTCCAGAGCCATGCTGGCGAGTACAC
CCCCGAGCGCCTCCGGGAGCTCCAGAAGAACGCCCGCCCGCTCCCTGGGAGCCTCATGCGTGCTCCCGCGCCGCCGCCTC
CCCCTCCTCCTGCAGCC---GAGTCCCGGCACCAGCGGCCTGCTGGAGCTGCGGCCAGCACCTCGTCTGCTCCCGCCGCT
GCCGGTAAAGCAGTTCCAGCGGAGCCCGTGGTTGTTCTCAAAGGTCTGGTGAAACCTATGGCACAGGCCAGCATAGGACC
ATCACCAAGACCGTTGCCGAACGAGGTTCAAGATAATGATTCTGAAGAGGAGGCGGAGGATGACGGAGAAGATGAGGAGA
AAGGGCCACTGATACCTGATAAGGCGACGATTGAGGCCATCCGGGCAAAGCGGCAGCAGCTGCAACAGCCGAGGCATGCG
GCGCCCGATTTCATCTCCCTTGATGGTGGCGGTGTGCTCAGCAGCAGGAGGGATGCGGCTGGTGGGTCCAGTGATGAAGA
CGACAACGAGATGGAGGGTAGGATTGCAATGTACTCTCAGAAGACGAGTGATGGCCAGAGGAGCTCAAAAGGAGTGTTTC
AGGGGATCAACAATAGGGGCCCTGCTGCCAGTTTGGGTGCTATGAAAGATAGGTTTATGGAGGTTGAGGATGATGAGGTT
GATGATGAAGAGGAGGAAGAAAGGAAGTGGGAGGAGGCGCAGGTTAAAAAGGCGCTTGGTAATAGGATGGACGATTCTTC
TGCTCAGAGAGCAACCAACGGGGTTCCGGCTTCGAGGCAGCAGGTTCAGCCGCAGCCGTCTGGGTACTCGGGGGGTCCTC
ATTATCAGCCCTCCTTTAGCGGGGTTGTGCCTGGGGCATCTGTTTTTGCATCGGGTAGTGCAGAGTTCTTGTCCATCTCT
CAACAAGCTGATGTAGCAAGCAAAGCCCTGCAGGAGAACATCAGAAAGCTCAAGGAAAGCCACAAGACAACAGTTGATTC
TTTAGCGAGGACCGACACACATCTTAATGAAGCCCTTTCAGAGATTTCCAGCCTGGAGGGTGGCTTGCAGGATGCAGAGA
AGAAGTTTGTGTATATGCAGGAGCTCCGCAACTATATTTCTGTCATGTGTGATTTCTTGAATGATAAGGCATTCTTTATA
GAGGAGCTGGAGGAGCACATGCAGAAATTGCATGAAAATCGGGCACTGGCTGTTTCTGAGAGGCGGGCTGCCGACTTTGC
TGATGAATCAGGTGTGATTGAAGCTGCGGTGAGTGCAGCAATATCTGTTCTTAGCAAAGGACCGAGCTCAGCTAATCTGT
CTGCTGCATCGCATGCTGCACAAGCAGCAGCAACTGCTGCCAGGGAAAGCGCTAACCTACCACCGGAGCTGGATGAGTTT
GGCAGAGATATCAATCTCCAGAAGCGTATGGATCTTAAGCGCAGGGAAGAGAACAGGAGGCAAAGAAAAGCTCAGTCCGA
ATCCAAAAGATTGTCTTCTGCACGAAAGAGTGCTACTGAGCACATTGAAGGTGAGCTAAGCACTGATGAGAGTGACACCG
ACACCAGTGCTTATCTGTCCAGCCGTGATGAGTTGCTCAAGACTGCTGATGCTGTATTCAGTGATGCTGCAGAGGAATAC
TCGAGCCTTACAATTGTCAAGGACAAGTTTGAAGGCTGGAAAACACAATATCCTTTGGCCTACCGAGATGCTCATGTGTC
ACTAAGTGTGCCATCTGTGTTTACCCCGTATGTGAGGCTGGAGCTTCTGAATTGGGATCCTCTCCATGAAACAACTAGTT
TCTTTGACATGCAGTGGACTAATGTTCTTGTGGGTTATGGAGTGCAAGATGAAGACAGTGCTGACCCTAATGATCTAGAT
CTGAACCTGATTCAAGTTCTAGCGGAAAAGGTAGCCCTTCCTGTCCTGCACCACCGTATTAAGCACTGCTGGGACATTTT
GAGCACGCAAAGAACACAACATGCTGTAGATGCAACTTTTATGGTGATTAACTATGTGCCGGTAACAAGCAAGGCTTTGC
ATCAACTGCTGGCGACGGTGTGTAGTCGTCTCACTGAGGCAATTGCTGATGTGTCAGTACCAGCCTGGGGATCAATGCTG
ACAAGGGCTGTGCCAGGTGCTGCTGAGTATGCTGCATACAGATTCGGAGTGGCCACGCGGCTGCTTAAAAATGTGTGTCT
GTGGAAAAAGGTCCTTGCAGTAGATGCCCTGGAGAAACTTGCTCTGGATGAACTATTGATAGGAAAGATTCTTCCTCATA
TGAAAAGTATCATTCTGGAAGTCCATGATGTGATCACAAGGGCCGAACGGATAGCCGCATCACTTTCAGGAGTCTGGTCT
TCACCAAACAAGAAGCTGCAGCCTTTCACAGATTTCGTGTTGGAACTATCAAACAAGCTCAAGAGTAGACACATTTCAGG
CGTTAGTGAGGAAGAGATACGTGGGCTGGCTCGCCGTTTGAAGAACATATTGGTGGCGCTGAACGAGTACGATAAGGCTA
GAAATATTTTGAAGACCTTCCAAATCAGAGAAGCTCTCTAGCTAGGTTTTCCCTTGACATAGAACAAGAATTGCATTTTT
GTTTGAAGGCGGCAAGCAGGTTGGATATCCTTATGGTTCACGGGAATGTTGTAATGTCTAATTATCTCTGTACATCAAAT
GATCATGAGTACCTAGTCCAATCTTG------CATGCATGGTGGTGCAATTTTCATGGTGCAATTTTCATGGTGCTTCTG
GATTTCAGGAATCGTTGTCTTCCTTGGTAATGGCCAACATGAGTT-----------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------
>SNPs
-----------------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
-----------------S---S------------------------------S-----------S---------------
S-----SS-SSS-SSSSSSS----------------------------S---S-------------------------S-
----------------------------------------S-----S---------SS-------------------S-S
------------------S------------------SS--------------SSSSSSSS----SSS------------
----S------------------SSSS--S--------------------------------------------------
----------------------------------------------------------------------SSSSS-SSS-
-----------S--S----S-SSSSSSSSSSS--------SS-SS-SSSSSSSSSSSSSSSSSS----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S-
S------S-----------------------SS-------------S--------------SSSSSSSSS----------
------S-----------------------------------------------------S-------------------
----------------------------S--------------------------------------------SSSSSSS
--S-------------------------SSSSSSS-SS------------------------------------------
-------------------------------------------------------------------S------------
-S------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
-------------------------------S--------------------------------------SS--------
--------------------------SSSSSS------------------------------------------------
------------------------------------------------------------S-------------------
---------------------------------------------------------------------S----S-----
-------------S---S--------------------------------------------------------S--S--
------------S-------------------------S---------------S-----------------------S-
----------------------------S---------------------------------------------------
-----S-----------------------------------------------S-----------------S--------
S-----S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--S--------------------------S--------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------S-----
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------S-----
----------------------S---------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------S-----------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------S--------------S--------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------S-----------------------------------------------
-------------------------SSSSSSS----------------------S-------------------------
-------------------------S------------S--------------------------S-----S--------
----------SSS--------S-S-------------S------------S-----------------------------
-S--------------S------S--------------S---------------------------------------SS
----------------S----SSSSSSS------------S----------------SS-S-SS-SS--SSSS-S-SSSS
S-SSSSS-SSS-SSS-S-S-SSSSSSS--S-SSS-S-SSSSSS-S---SSSS--SSSS-SSSSSS--S--SSS-SSSSSS
---S---SSSSSS---S-S-SSSSSSSSSSS-SSSSSSSSSSS-SSSSSS-SS-S-SSSSSS-SSSSS-S--S-SS-SS-
SSS-SSSSSSSSSSS--SSSSSS--SSS-SSS-SSSS--S--SSSS-SSSSSSSSSS-SS-S-S-SSS-SS-SSSSS---
--------------------------------------------------------------------------------
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----------------------------------------------------------------SS--S-----------
--S----------------------------S---------------------S-----SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_896
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------------CTGA
GCCTGGCTATATGGGC----------------------------------------------------------------
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>reverse_2828
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---------------------------CTGCATGAAAATCGGGCACT---------------------------------
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---------------------------------------------------------------------------
>forward_992
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------------GCAGGCCAAGTCTGAGAGAG------------------------------------------------
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>reverse_2887
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------GTCAGGTGTGATTGAAGCTGC-----------------------------------------------------
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>forward_1047
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-------------------------------------------------------------------TCCGGACCCTACT
TGGACTC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3055
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--------------CCTCCAGAAGCGTATGGATCT---------------------------------------------
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>forward_1199
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-----------------------------------------------------------CCAAGCCTTCTCCATCCACC-
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>reverse_3214
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-------------CCTGTCCAGCCGTGATGAG------------------------------------------------
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>forward_3115
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-------------------------------------------------------GGAGGCGAAGAAAAGCTCGA-----
--------------------------------------------------------------------------------
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>reverse_3953
--------------------------------------------------------------------------------
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--------------------------------GTCACAAGGGCCGAAAGGAT----------------------------
--------------------------------------------------------------------------------
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>forward_3214
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------ACACCG
ACACCAGTGCTTAC------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4891
--------------------------------------------------------------------------------
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----------TTTTCTTGTGTGCCGCTGAC--------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------
