>input_sequence_26438
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-------------------------------------------ATGCCGTCCATCCGCGCGCTCGTGCGCCTCGCCGCCC
CCCACCCGCCGCGCGCCGGCGCGCCGGAAGAGAGCCCCCCGCAGC---GGCGTTCCGG------------------CTCC
TCCCCCTCCTCCTCGTCGGCCTCGGCGCCCGCCAGGCCGGCGGCGGCGCCGCTGCCGCCGCAGGGCCCGGTGTACCCGCT
GCGGGACTTCCCGGGGAGCGAGGCGGCCGCGCTGTGCGGCGCGTTCCGGGACAACGCGCGGTGGCTGCTGGCGCGCTGGG
CCCCCGTCGACGCCGCCGGGTCCTCCCCGGGCCCCGCCGCGCGCCGGGCGTTCCTCTCCGACGACCGCACCGGCGCCGTC
GTCCCCGTCGTCGCCGTCGAGGTGCCCGCCGCCTCCTCCCCCGCCCCGCTCTGCGGCCTCTGCCGCTGCGCCGGTGAGTG
CGCCCCAATCTG---TCTCCTCGCGTGCTTCGTTTTCGGCGTGGTGCCCG-----CGCCCATTCGAGGGCGGTCGGCGGA
TTCGCGCGGATTCAGGTTTCGGTCGGTCCCGGTAGTTTCTTGATCGCAGTCGATTCGGGCGAACGGATGAGAGCAGAGGG
ACGATCGAAGCTG----CTCTTCCAAATGTTTATTTTCCTTCGTGATTTGGGGAAGAAACGCGGTTTTCCGATTAGATAG
ACAGATTTTCAGCATTACTTTCTTGGAATTTGTTCATTTTTCGCGTTACTGCAGGCCTGCAACAGCTCGAAATTGCGACC
CAAATTCGGCGAACGGATCATAACAATAGCTGCATTTCGCTTCCTGTTCTTGCATCCACAGTCATAGATTGTTTTACCCC
-GCTTACACATTGCCTGGACCGGACTTGACGGGCTCCATCCAGCCGGTTCAAATTGTTTGGAATCCGCTTCCTGAAATGG
CTATGCAGGTTGCAATGATGGCCTCTAGCCCACCAAAGTTTTGTTTCCCATCCTGGAAAAGTGGTGGTTTGCGCATTGAT
GAGTTGGTTCCCAG--TAGTACTATTTTTCTGAACGAGAACAATTTCCTGTCAGGTTGGAGCCACCACTGGGTGTCAAAA
CGGAGCTACCATTTCATCATCCCGGCGGACGCGGACTGGGACCGGCATTTCGGTACCGACGGGCTGCTTGGGCGCAGCGA
CCACCTCCTCCATGGCCTCATCCACTGCAATGGCTTTGGCCACCTCTTCGCCCTCCGCGGCCGCGACGGTGGCTCGGCTT
TCCTCTCTGGTCATGACATAATGGATATCTGGGATCGCCTCTGCTCTGCTCTCCGTGTCAGGTAACAGATTTTACCAGTA
C-------ACCTCTTTCCTGTTCAGACATTCCGTTCATATGCACTTGTGTTAATA---AGTACCATGACTGC-TCAACT-
-----------------------------GATTAATCTGTATTCTTTGAATGGGCTTCTGAGATG---------------
-----------TACATTTAGGAGGGAATGGAGTAAATAATAGAACTTGAAAACCCTTTGCATGTATACAACGATTATGCA
TACAATGGAGATCGCTGCTTTATTGTTTTCTGAGCTTTGAGAGCCTTCTGTTTCTATGCAGGGCCGTGTCTCTGGTGGAT
TTTTCTCGGAAGCACTCTATGGACCTCCGCCTCCTGCTCGGTGTGGCAAATGGTGAGACATGGTTCACCCGCTGGGGATA
CTGCCTCGGCAGGAGATGCTTCAACATGTCTACCTCTGCCTATGCCACTGCTTTGGAATCTCTGGCTTCACTGCATGTTG
ACCATCTTCGCAGCCGACATGTTCGTCGTGTGGTCACCATCTACCGGCGCCTATCCAACAAGCCTCTGATCACTGTCAGC
GAGTTCCTCCGCTGCCTCCTTGACTGGAAACACCATGAAGCACCCCTTTCACCACCTCCTGTGAAGCCATGCTCCCGGCT
CCCATTCCTGCTGCCGAGGCCGTGTACGATGAAGAGGAGCCCGCCGTGCAAGCGGTTTGAGGATGTGATTGACCTGCTCC
ATTGTCGATGGTCCAAGAAGCGTATGCTCAATGCAGCAGAGGTTGTTGTTGAAAAGCTGCTTGAGCATGGAAATGATGCT
GAGATGACAAGGCAGGCAGTGCGAGATGCTGCCAGGGTTGAGATCGGCGATACTGGTCTCCTTGACTTTGTCATCAAGTC
CCTTGGTGACACCGTTGTTGGCAACCATATTGTGCGCCGTCTTCCCAGCACTGTGACGCGTGTGCTCACGTTCAGCCTTG
AGGAATGGGGAGAGCCAGTGCAGATGGATGTTGACGTACAGAACACCCGTCCTGCAGCACCGTGGCCGAGCACAGTGGAT
GTCGAGCGGGATCTGTGTGCTGTCTACCGGGCAATGGTGGAGGCGCTAAGTGGGGCAGCACAGGCCGTGCTGGACTGCAA
GCACTGGGTGAAGTGCTGGGGCCTTGGGGATGAGTCTGACGATCAGCTAAGGTTCCTCGTTGAGTGGCGACCGCAGCCTT
GGGAAGCTGCTGAGCTCACACGGCCACTGCCGTCAGGGGAGATCGTTGTGGTGCCAGTCCATACATCGATAGGCGAGCTT
ATCATCGAGGCAGAGCATGCGCTGAGGGACACGTACTGCTTCTTTGAGGAGTTCCAGGCTGAGTCGCTCGACGGCATTAC
TGGGGAGAAGTGGGATCCAGTGGTGCTTGGTGGAGCAGAGTCTGGGGACACGATCGGCGTGCATGGCCACGGGGCGGACA
TGGAGACCGGGCTGCGGTGCGAGGGCGGGCTTGACATGTGGGAAGTGAGGTGCGTGTGCGGTGCGCGGGATGATGACGGC
GAGCGCATGGTGGCCTGCGACGCTTGCGATGTATGGCACCACACGCGGTGTGTCGGCATTGCGGACAGCGACGCGGTGCC
GCCATTGTTCCTGTGCATACTCTGCGGCGGCGCGCTCCTAGCAGCCGGCCCGATTCTGGAGGAGGCACTAACGCTAGCCA
AGTGA---------------------------------------------------------------------------
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>chr4B_1_TraesCS4B01G049600
CTCGCCGGAGAAGGAACCCCGATCTGAATTCTAGCAGGGCCGCACCGAGATCTGATGCGAAGTCGCACCAGAGGTGCGAG
TCGCCCAGGAGCCGTGTGTCGCACCCCATCCAATCCCACTACCCCTCATTAGTCCTGGCCATGGGCAGCCCGGCCCGACC
CGACGCTGCACGCGGGCCGGGCCTGGGCCTACATTTTGAGCCCGAAGGCCTGACTCGGGCCCGCCGTTTTAACGATTTAC
TGAAAGGGCCCGGCCCAAGGCCCAGCGGGCTTTATCACTTTCGAG-----------CCTAGGTTTTCTACCTCGGGCTTT
GGTAGGCC-----------GGCCCGGCAGTTGGCGAGGTATACCCCTCATCCTAGCCGGATTCTAGTGTCGTGTGTCCTT
GGAACGAAATTCCAGAGCAAGAACACGAGCAAGGTTGGGTT------------------GGGTTAATCACATGAGCAAGG
TTGGGTTAATCGATGGAGTAATTGTTCATTCATCTTCCGATGTCCATCTTCGCTTTGACCGGCACAAACAAGCCTTGCGA
ACGACAGAAGAAAGTTTGGCCAGAGAGCGAGCCGCCACGTCAC-CCCACCCTACTCTGCGAGGGGCCAGTCCTACG----
----ATCATCCTACCCCTGCCGCCTACGGACGGTACAAGTCACAGTCACCCACCGCAGATAAACTCTCCACACCACCCAC
AGCTCGACCCAGGCCACTGA-------------AAAGCGGGGCCCGTATCCCGCAA-GCCTTTTTACAGACGCGCGGGCC
GAGCGTCGCACGGTGACGGCGCATTTTTCTCGGAGAGCAGCACAGTACAGCTTCAGAACGAACTGTCCGGAACGTCACGG
TCGCCGGAGCGCGTGGTTCGAAAGCTACCCGTGGCCGCGGGGAGCGTGGCGGGGGCCCACCAGTCAGAG-----------
---------AGGAGGAGCGCCGCCCGGAAGGCAAAATTACCGGAACGCCCCTGCCGCCGAGGACCGCGAGGCCAAAAACC
CTGAACCCCGAGGGAGGCAGAGGCAGAGGCAGGGCCCGGGGCAATGCCGTCCATCCGCGCGCTCGTGCGCCTCGCCGCCC
CCCACCCGCCGCGCGCCGGCGCGCCGGAAGAGAGCCCCCCGCAGC---GGCGTTCCGG------------------CTCC
TCCCCCTCCTCCTCGTCGGCCTCGGCGCCCGCCAGGCCGGCGGCGGCGCCGCTGCCGCCGCAGGGCCCGGTGTACCCGCT
GCGGGACTTCCCGGGGAGCGAGGCGGCCGCGCTGTGCGGCGCGTTCCGGGACAACGCGCGGTGGCTGCTGGCGCGCTGGG
CCCCCGTCGACGCCGCCGGGTCCTCCCCGGGCCCCGCCGCGCGCCGGGCGTTCCTCTCCGACGACCGCACCGGCGCCGTC
GTCCCCGTCGTCGCCGTCGAGGTGCCCGCCGCCTCCTCCCCCGCCCCGCTCTGCGGCCTCTGCCGCTGCGCCGGTGAGTG
CGCCCCAATCTG---TCTCCTCGCGTGCTTCGTTTTCGGCGTGGTGCCCG-----CGCCCATTCGAGGGCGGTCGGCGGA
TTCGCGCGGATTCAGGTTTCGGTCGGTCCCGGTAGTTTCTTGATCGCAGTCGATTCGGGCGAACGGATGAGAGCAGAGGG
ACGATCGAAGCTG----CTCTTCCAAATGTTTATTTTCCTTCGTGATTTGGGGAAGAAACGCGGTTTTCCGATTAGATAG
ACAGATTTTCAGCATTACTTTCTTGGAATTTGTTCATTTTTCGCGTTACTGCAGGCCTGCAACAGCTCGAAATTGCGACC
CAAATTCGGCGAACGGATCATAACAATAGCTGCATTTCGCTTCCTGTTCTTGCATCCACAGTCATAGATTGTTTTACCCC
-GCTTACACATTGCCTGGACCGGACTTGACGGGCTCCATCCAGCCGGTTCAAATTGTTTGGAATCCGCTTCCTGAAATGG
CTATGCAGGTTGCAATGATGGCCTCTAGCCCACCAAAGTTTTGTTTCCCATCCTGGAAAAGTGGTGGTTTGCGCATTGAT
GAGTTGGTTCCCAG--TAGTACTATTTTTCTGAACGAGAACAATTTCCTGTCAGGTTGGAGCCACCACTGGGTGTCAAAA
CGGAGCTACCATTTCATCATCCCGGCGGACGCGGACTGGGACCGGCATTTCGGTACCGACGGGCTGCTTGGGCGCAGCGA
CCACCTCCTCCATGGCCTCATCCACTGCAATGGCTTTGGCCACCTCTTCGCCCTCCGCGGCCGCGACGGTGGCTCGGCTT
TCCTCTCTGGTCATGACATAATGGATATCTGGGATCGCCTCTGCTCTGCTCTCCGTGTCAGGTAACAGATTTTACCAGTA
C-------ACCTCTTTCCTGTTCAGACATTCCGTTCATATGCACTTGTGTTAATA---AGTACCATGACTGC-TCAACT-
-----------------------------GATTAATCTGTATTCTTTGAATGGGCTTCTGAGATG---------------
-----------TACATTTAGGAGGGAATGGAGTAAATAATAGAACTTGAAAACCCTTTGCATGTATACAACGATTATGCA
TACAATGGAGATCGCTGCTTTATTGTTTTCTGAGCTTTGAGAGCCTTCTGTTTCTATGCAGGGCCGTGTCTCTGGTGGAT
TTTTCTCGGAAGCACTCTATGGACCTCCGCCTCCTGCTCGGTGTGGCAAATGGTGAGACATGGTTCACCCGCTGGGGATA
CTGCCTCGGCAGGAGATGCTTCAACATGTCTACCTCTGCCTATGCCACTGCTTTGGAATCTCTGGCTTCACTGCATGTTG
ACCATCTTCGCAGCCGACATGTTCGTCGTGTGGTCACCATCTACCGGCGCCTATCCAACAAGCCTCTGATCACTGTCAGC
GAGTTCCTCCGCTGCCTCCTTGACTGGAAACACCATGAAGCACCCCTTTCACCACCTCCTGTGAAGCCATGCTCCCGGCT
CCCATTCCTGCTGCCGAGGCCGTGTACGATGAAGAGGAGCCCGCCGTGCAAGCGGTTTGAGGATGTGATTGACCTGCTCC
ATTGTCGATGGTCCAAGAAGCGTATGCTCAATGCAGCAGAGGTTGTTGTTGAAAAGCTGCTTGAGCATGGAAATGATGCT
GAGATGACAAGGCAGGCAGTGCGAGATGCTGCCAGGGTTGAGATCGGCGATACTGGTCTCCTTGACTTTGTCATCAAGTC
CCTTGGTGACACCGTTGTTGGCAACCATATTGTGCGCCGTCTTCCCAGCACTGTGACGCGTGTGCTCACGTTCAGCCTTG
AGGAATGGGGAGAGCCAGTGCAGATGGATGTTGACGTACAGAACACCCGTCCTGCAGCACCGTGGCCGAGCACAGTGGAT
GTCGAGCGGGATCTGTGTGCTGTCTACCGGGCAATGGTGGAGGCGCTAAGTGGGGCAGCACAGGCCGTGCTGGACTGCAA
GCACTGGGTGAAGTGCTGGGGCCTTGGGGATGAGTCTGACGATCAGCTAAGGTTCCTCGTTGAGTGGCGACCGCAGCCTT
GGGAAGCTGCTGAGCTCACACGGCCACTGCCGTCAGGGGAGATCGTTGTGGTGCCAGTCCATACATCGATAGGCGAGCTT
ATCATCGAGGCAGAGCATGCGCTGAGGGACACGTACTGCTTCTTTGAGGAGTTCCAGGCTGAGTCGCTCGACGGCATTAC
TGGGGAGAAGTGGGATCCAGTGGTGCTTGGTGGAGCAGAGTCTGGGGACACGATCGGCGTGCATGGCCACGGGGCGGACA
TGGAGACCGGGCTGCGGTGCGAGGGCGGGCTTGACATGTGGGAAGTGAGGTGCGTGTGCGGTGCGCGGGATGATGACGGC
GAGCGCATGGTGGCCTGCGACGCTTGCGATGTATGGCACCACACGCGGTGTGTCGGCATTGCGGACAGCGACGCGGTGCC
GCCATTGTTCCTGTGCATACTCTGCGGCGGCGCGCTCCTAGCAGCCGGCCCGATTCTGGAGGAGGCACTAACGCTAGCCA
AGTGACCATTCTTTCTCTTTCAGCTGCTCCTGGGCTCACAATGCTCACTGATGGTAGTCTGACGAGGTAAAACCGGTTGC
GAAACCTTTTCTCTTGTGTAAAAAGTGCGTTGTTGTGGTATGATTAGTACTTCAACTCAGATGTGGTATG----------
-CCAGAAGTTAATGTGTAGAAGTAGCAGATGATGATATGAGGGGATCAGTAGACAGTGGATGTGGGAAATCCCATCCTAT
CCATGTCGGTTGCTATCATCCGACTGGAAATTTTGTTAGTGCCTGATGCATCACAGAAGATGATATAGCTAGCTAGATGT
AAATACATGTTCTGTGATTGTATCTTGTACTGTCTCTGAATCCCTCCCAAGTATTATATACAGACAAATAAAGTCATGTT
ATGC-------TGGTGTGCTGTCTGGCTTTCTTGTTTTGTTGACGCTTCCAGCAGGCGTTTCCGCTG-TTTGTTGGCTTC
ATCATGTGTAACGATCTGTTGTATTGCAGCCAAGGAGTTTTACATGGTCGTCTCTCACTCTCGCAACTTTCTCCCATGTT
GATGAATGGATGTTGCCTAAGGTTTGGCCGCTCGGGAATCTGAACATCCATGACTTTTTTTTCAGAATTTTTTGAAACAT
CTAAATTTGAATTTTTTAAGTTGGTACCTGTTTGACACGAGAAAAACATCTAAAACTCCGAGGAGAAGGGAGGAAGGGAG
TGTGTTTCTCTCAGACGCCGGGGAAGGAAAACTGAGTATGCGGGCGTGCCAGTGTACCATAGCACACAAAGAAAAATAAA
TACATTAATCTCATTGGAGAAATAAAATTACATTATCCCGTAAAAAAGGTGCGCTCCGTGGCCTACGGTTGTGGCGATTG
TGTGATCTCCTGGTTCCCGGGGCCTCGAAAGGCTCTCAGTTAATTACTCCGGCGGGTTGCTCCGCGGGATACCTCCGATT
GAGCTGTGTGGTCGTCTTCGCTTCGCGGTCTCCATGCATGATGATGGTGATGTGTGTTTGGGCG
>chr4A_1
CTCGCCGGAGAAGGAACCCCGGCCTGAATTCTAGCAGGGCCGCACCGAGATCTAATACGAAGTCGCACCGGAGGTGCGAG
TCGCCGAGGAGCCGTGTGTCGCAACCCATCCAATCCCACTAACCCTCATTAGTCCTGGCCATGGGCAGCCCGGCCCGACC
CGACGCTGCACCTGGGCCGAGCCTGGGCCTACATTTTGAGCCTGAAGGCCGGGCTCGGGCCCGCCATTTTAACGATTTAC
TAAAGGGGCCCGGCCCAAGGCCCAGCGGGCTTTATCACTTTTGGGCCGGGCTCGGACCTAGGTTTTCTGCCTCGGGCTTT
GGTAGGCCCGGCCTGGCCTGGCCCGGCAGATGGCCAGGTATACCCCTCATCCTAGCCGGATTCGAGTGTCGTGTGTCCTT
GGAAAGAAATTCCAGAGCAAGAACATGAGCAAGGTTGGGTTAATCACATGAAGAAGGTTGGGTTAATCACATGAGCAAGG
TTGGGTTAATTGATGGAGTAATTGCGCATTCATCTTCCGATGTCCATCTTCGCTTTGACCGGCACAA-------------
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>chr4D_433
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------------------------------------------------------------------------GAGCAAGG
TTGGGTTAATCGATGGAGTAATTGCTCATTCATCTTCCGATGTCCATCTTCGCTTTGACCGGCACA----AGCCTTGCGA
AGGACAGAAGAAAGTTTGGGCAGAGAGCAAGCCGCCACGTCAC-CCCACCCTACTCTGCGAGGAACCAGTCCTACGATCA
TCCTATC--------CCTGCCGCCTATGGTAC-----AGTCACAGTCACCCATCGCAGATAAACTTTCCACAGCACCCAC
AGCCCGACCCCGGCCACACCTACCACCCCACTGAAAACGGGGCCCGCATCCCGCAAA--CTTTATGCAGACGCGCGGGCC
GAGGGTCGTCCGGTGACCGAGCA-TTTTCTCGGAGAGCAGCACAGTACAGCTTCAGAACGAACTGTCCGGAACGTCACGG
TCGCCGGAGCGCGTGGCTAGAAAGCTACCCGTGGCCGTGGGGAGCG-GGCAGGGGCCCACCAGCCAGAG-----------
---------AGGAGGAGCCCCGCC------GCAAAATTACGGGAACGCCCCTGCCGCCGAGGACCGCGAGGCCAAAAACC
CTGAACCCCGAGAGC------GGCAGAGGCAGGGCCCGGGGCAATGCCGTCCATCCGCGCGCTCATGCGCCTCGCCGCCC
CGCACCTGCCGCCCGCCGGCGCGGCGGAGGAGAGCCCCCCGCCGC---AGCGGCGGCATTCCGGCTCCCCCCGCCTCTCC
TCCCCCTCCTCCTCGTCGGCCTCGGCGCCCGCCAGGCCGGCTGCGGCGGCGGCGCCGCCGCAGGGCCCGGTGTACCCGCT
GCGGGACTTCCCGGGGAGCGAGGCGGCCGCGCTGTGCGGCGCGTTCCGGGACAACGCGCGGTGGCTGCTGGCGCGCTGGG
CCCCCGTCGCCGCCGCCGCGTCCTCCCCGGGCCCCGCCGCGCGCCGGGCGTTCCTCTCCGACGACCGCACCGGCGCCCTC
GTCCCCGTCGTCGCCGTCGAGGTGCTCGCCGCCTCCTCGCCCGCCCCGCTCTGCGGCCTCTGCCGCTGCGCCGGTGAGTG
CGCCCCCGTTTTGG--CTCCTCGCGTGCTTCGTTTTCGGCGTGGTGCCTGCGCCCCGCCCATTCGAGGCCGGTCGACGGA
TTCGCGCGGATTTAGGTTTCGGTCGGTCCCGGTAATTTCTTGATCGCGGTTGATTTGGGCGAACGGATGAGCG--GATGG
ACGATTGAAGCTG----CTCTTCCAAACGATTATTTTCCTTCGTGATTCGGGGAAGAAACGCGGTTTTCCAATTAGATAG
ATAGATTTCCGGCATTACTTTCTTGGAATTTGTTCATTTC-CGCGTTACTGCAAGCCTGCAACAGCCCCAAATTGCGACC
CAAATTCGGCGAATGGATCGTAATAATAGCTGCATTTTGCTTCCTGTTCTTGCATTCACAACCATAGATTGTTTTACCCC
CGCTTACACATTGCCTGGATCGGATTTGACGGGCTCCATCCAGCCGGTTCAAATTGTTTGGAATCCGCTTCCTGAAATGG
CTATGCAGGTTGCAATGATGGCCTCTAGCCCACCAAAGTTTTATTTCCCATCCTGGAAAAGTGGTGGTTTGCGCATTGAT
GAGTTGGTTCCCAG--T-GTACTATTTTTCTGAACGAGAACAATTTCCTGTCAGGTTGGAGCCACCACTGGGTGTCAAAA
CGGAGCTACCATTTCATCATCCCAGCGGACGCGGACTGGGACCGGCATTTCGGCACCGACGCGCTGCTTGGGCGCAGCGA
CCACCTCCTCCATGGCCTCATCCACTGCAATGGCTTTGGCCACCTCGTCACCCTCCGCGGCCGCGACGCTGGCTCGGCGT
TCCTCTCTGGTCATGACATAATGGATATCTGGGATCGCCTCTGCTCTGCTCTCCGTGTCAGGTAACAAATTTTACTTACT
AGTACCACACTTCTTTCCTGTTCAGACATTCCCTGCATATGCACTTGTGTTAATAAGTAGTACCATGACTGCCTCAACT-
-----------------------------GATTGATCTGTGTTCTTTGAATGGGCTTCTGAGATGTGCGTACTGTAATAA
GATTACAATTTTACATTTAGGAGGGAATGGAGTAAATAATAGAACTTGAAAACCCTTTGCGTGTATACAATGATTATGCA
TACAATGGAGATCGCTGCTTTA-TGTCTTCTGAGCGTTGAGAGGCTTCTATTTGTATGCAGGGCTGTCTCTCTGGTGGAT
TTTTCTCGGAAGCACTCTATGGACCTCCGCCTCCTGCTCGGTGTGGCAAATGGTGAGACATGGTTCACCCGCTGGGGATA
CTGCCTTGGCAGGAGATGCTTCAACATGTCTACCTCCGCCTATGCCACTGCTTTGGAATCTCTGGCTTCGCTGCATGTTG
ACCATCTTCGCAGCCGACATGTTCGTCGTGTGGTCACCATCTACCGGCGCCTATCCAACAAGCCTCTGATCACTGTCCGC
GAGTTCCTCCGCTGCCTCCTTGACTGGAAACACCATGAAGCACCCTTTTCACCACCTCCTGTGAAGCCATGCTCCCGACT
GCCATTCCTGCTGCCGAGGCCGTGTACGATGAAGAGGAGCCCGCCGTGCAAGCGGTTTGAGGATGTGATTGACCTGCTCC
ATTGTCGATGGTCCAAGAAGCGTATGCTCAATGCAGCAGAGGTTGTTGTTGAAAAGCTGCTTGAGCATGGAAATGATGCA
GAGATGACAAGGCAGGCAGTGCGAGATGCTGCCAGGGTTGAGATCGGCGATACTGGTCTCCTCGACTTTGTCATCAAGTC
CCTTGGTGACACCGTTGTTGGCAACCATATTGTGCGCCGTCTTCCCAGCACTGTGACGCGTGTGCTCACGTTCAGCCTTG
AGGAATGGGGAGAGCCAGTGCAGATGGATGTTGAGGTACAGAACACCCGTCCTGCAGCACCGTGGCCGAGCACAGTGGAT
GTCGAGCGGGATCTACGTGCCGTCTACCGGGCAATGGTGGAGGCGCTAAGTGGGGCAGCACAGGCCGTGCTGGACTGCAA
GCACTGGGTGAAGTGCTGGGGCCTTGGGGATGAGTCTGACGATCAGCTAAGGTTCCTCGTTGAGTGGCGACCGCAACCTT
GGGAAGCTGCTGAGCTCACACGGCCACTGCCGTCAGGGGAGATTGTCGTGGTGCCAGTCCATACATCGATAGGCGAGCTT
ATCATCGAGGCAGAGCATGCGCTGAGGGACACGTACTGCTTCTTTGAGGAGTTCCAGGCCGAGACGCTCGACGGCATTAC
TGGGGAGAAGTGGGATCCAGTGGTGCTTGGTGGAGCAGAGTCCGGGGACACGATCGGCGTGCATGGCCACGGGGCGGACA
TGGAGACCGGGCTGCGGTGCGAGGGCGGGCTTGACATGTGGGAAGTGAGGTGCGTGTGCGGTGCGCGGGATGATGACGGC
GAGCGCATGGTGGCGTGCGACGCGTGCGATGTATGGCACCACACGCGGTGTGTCGGCATTGCGGACAGCGATGCGGTGCC
GCCATTGTTCCTGTGCATACTCTGCGGCGGCGCGCTCCTAGCAGCCGGCCCCATGCTGGAGGAGGCACTAACGCTAGCCA
AGTGACTATTCTTTCTCTTTCAGCTGCTCCTGGGTTCACATTGCTCACTGATGGTAGTCTGACGAGGTAAAACCAGTTGT
GAAACCTTTTCTCTTGTGTAAAAAGTGCGTTGTTGTGGTATGGTTAGTACTTCAACTCAGATTGTGGTATGTTAGTACAA
CTCAGAAGTTAATGTGTAGAAGTAGTAGATGATGATATGAGGGGATCAGTAGACAGTAGATGGGGGAAATCCCATCCTAT
CCACGTCGGTTGCAG---TCCGACTGGAAATTTTGTTAGTGCCTGATACATCACAGAAGATGATATAGCTAGCTAGATGT
AAATACATGTTCTGTGATTGTATCTTGTGCTGTCTCTGAATCCCTCCCAAGTATTATATACAGACAAATAAAGTCATGTT
ATGCTGGTGTGTGGTGTGCTGTCTGGCTTTCTTGTTTTGTTGACGCTTCCA-----------------------------
---------------------------------------------------------CTCTCGCAACTTTCTCCCATGTC
GATGAATGGATGTTGCCTAAAGTTTGGCCGCTCGGGAATCTGAACATCCATGAATTTTTT--------------------
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>chr4A_529
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--------AGAATGTTTGGGCAGAGAGCAAGCCGCCACGTCTCACCCACCCTACCCTGCGAGGGGCCAGTCCTACG----
----ATC--------CCTGCCGCCTATGGTAC-----AGTCACAGTCACCCATCGCAGATAAACTTTCCACAACACCCAC
AGCCCGACCCCGCGCACACCTACGACCCCACTGAAAAGCGGGACCCGCCTCTCGCAGGCCTTTTTACAGACGCGCGGGCC
GAGCGTCGCACGGTGACCGAGCA-TTTTCTCCGAGGGCAGCACAG-----------AACGAACTGTCCGGAACGTCACGG
TCGCCGGAGCGCGTGGCTCGAAAGCTACCCGTGGCCGTGGGGAGCG-GGCGGGGGCCCACCAGTCAGAGCTCCTCTCTTC
CCCGGAATGAGGAGGAGCACCGCCCGCAG-----AATTACCGAAACGCCCCTGCCGCCGAGGACCGCGAGGCC-AAAACC
CTGAACCCCGAGAGCGGCAGAGGCAGAGGCAGGGCCCGGGGCAATGCCGTCCATCCGCGCGCTCATGCGCCTCGCCGCCC
CCCACCCGCCGCCCGCCGGCGCGGCGGGGGAGAGCCCCCCGCAGCCGCAGCGGCGGTGTTCCGGCTCCCCCCGCCTCTCC
TCTCCCTCCTCCTCGTCGGCCTCGGCGCCCGCCAGGCCGTCGGCGGCTGCGGCGCCGCCGCAGGGCCCCGTGTACCCGCT
GCGCGACTTCCCGGGGAGCGAGGCGGCCGCGCTGTGCGGCGCGTTCCGGGACAACGCGCCGTGGCTGCTGGCGCGCTGGG
CCCCCGTCGCCGCCGCGTCGTCCTCCCCGGGCCCCGCCGCGCGCCGGGCGTTCCTCTCCGACGACCGCACCGGCGCCCTC
GTCCCCGTCGTCGCCGTCGAGGTGCCCGCCGCGTCCTCGCCCGCCCCGCTCTGCGGCCTCTGCCGCTGCGCCGGTGAGTG
CGCCCCCCGTTTTGTTCTCCTCGCGTGCTTCGTTGCCGGCGTGGCGCCTGCGCCCG-----TTCGAGGGCGGTTGACGGA
TTCGCGCGGATTTAGGTTTCGGTCGGTCCCGATAGTTTCTTGATCGCCGCTGATTTGGGCGAATGGATGAGAGCAGAGGG
ACGATTGAAGTTGGGAACTCTTCCAAATGATTATTTTCCTTCGTGATTTGGGGAAGAACCGCGGTTTTGCGATTAGATAG
ATGGATTTCCGGCATTACTTTCTTGCAATTTGTTCATTTC-CGCGTTACTGCAAGCCTGCAACAGCTCGAAATTGCGACC
CAAATTCGGCGAATGGATCATAACAATAACTGCATTTTGCTTCCTGTTCTTGCATTCACAACCATAGATTGTTTTACCCC
-GATTACACATTGCCTGGATCGGACTTGACGGGCTCCATCCAGCCGGTTCAAATTGTTTGGAATCCGCTTCCTGAAATGG
CTATGCAGGTTGCAATGATGGCCTCTAGCCCACCAAAGTTTTACTTCCCATCTAGGAAAAGTGGTGGTTTGCGCATTGAT
GAGTTGGTTTGGTTCCTAGTACTATTTTGCTGAACGAGGACAATTTCCTGTCAGGTTGGAGCCACCACTGGGTGTCAAAA
CGGAGCTACCATTTCATCATCCCCACCGACGCAGACTGGGACCAGCATTTCGGCACAGACGCGCTGCTTGGACGCAGCGA
CCACCTCCTCCATGGCCTCATCCACTGCAATGGCTTTGGCCACCTCGTCGCCCTCCGCGGCGGCGACGGTGGCTCGGCTT
TCCTCTCAGGTCATGACATAATGGATATCTGGGATCGCCTCTGCTCTGCTCTCCGTGTCAGGTAACAGATTTTACTTGT-
--------ACTTCTTTCCTGTTCAGAGACTCCCTGCATATGCACTTATGCTAATA---AATACCATCACTGC-TCAACTG
ATTAATATGTATTCTTCAGTTAAAAAAAAGATTAATCTGTATTCTTTGAATGGGCTTCTGAGATGTGCGTACTG---TAA
GATTGCAATTTTACATTTAGGGGGTAATGGAGTAAATAATAGAACTTGAAAACCCTTTGCATGTATACAATGATTATGCA
TACAATGGAGATCGCTGCTTTATTGTCTTCTGAGCTTTGAGAGCCTTCTATTTCTATGCAGGGCCGTGTCTCTGGTGGAT
TTTTCTCGGAAGCACTCTATGGACCTCCGCCTCCTGCTCGGTGTGGCGAATGGTGAGACATGGTTCACCCGCTGGGGATA
CTGCCTTGGCAGGAGATGCTTCAACATGTCTACCTCCGCCTATGCCACTGCTTTGGAATCTCTGGCTTCACTGCATGTTG
ACCATCTTCGCAGCCGACATGTCCGTCGTGTGGTCACCATCTACCGGCGCCTATCCAACAAGCCTCTCATCACTGTCCGC
GAGTTCCTCCGCTGCCTCCTTGACTGGAAACACCATGAAGCGCCCCTTTCACCACCTCCTGTGAAGCCATGCTCCCGGCT
CCCATTCCTGCTGCCGAGGCCGTGTACGATGAAGAGGAGCCCGCCGTGCAAGCGGTTCGAGGATGTGATTGACCTGCTCC
ATTGTCGATGGTCCAAGAAGCGTATGCTCAATGCAGCAGAGGTTGTTGTTGAAAAGCTGCTTGAGCATGGAAATGATGCA
GAGATGACAAGGCAGGCAGTGCGAGATGCTGCCAGGGTTGAGATCGGTGATACTGGTCTCCTCGACTTTGTCATCAAGTC
CCTTGGTGACACCGTTGTTGGCAACCATATCGTGCGCCGTCTTCCCAGCACTGTGACGCGTGTGCTCACGTTCAGCCTTG
AGGAATGGGGAGAGCCAGTGCAGATGGATGTTGAGGTACAGAACACCCGTCCTGCAGCACCGTGGCCGAGCACAGTGGAT
GTCGAGCGGGATCTGCGTGCCGTCTACCGGGCAATGGTGGAGGCGCTAAGTGGGGCAGCACAGGCCGTGCTGGACTGCAA
GCACTGGGTGAAGTGCTGGGGCCTTGGGGATGAGTCTGACGATCAGCTAAGGTTCCTCGTTGAGTGGCGACCGCAACCTT
GGGAAGCTGCTGAGCTCACACGGCCACTGCCGTCAGGGGAGATTGTCGTGGTGCCAGTCCATACATCGATAGGCGAGCTT
ATCATCGAGGCAGAGCGTGCGCTGAGGGACACGTACTGCTTCTTTGAGGAGTTCCAGGCTGAGACGCTCGACGGCATTAC
TGGGGAGAAGTGGGATCCAGTGGTGCTTGGTGGAGCAGAGTCCGGGGACACGATCGGCGTGCATGGCCACGGAGCGGACA
TGGAGACCGGGCTGCGGTGCGAGGGCGGGCTCGACATGTGGGAAGTGAGGTGTGTGTGCGGTGCGCGGGATGATGACGGC
GAGCGCATGGTGGCGTGCGACGCTTGCGATGTATGGCACCACACGCGGTGTGTCGGCCTTGCGGACAGCGACGCGGTGCC
GCCATTGTTCCTGTGCATACTCTGCGGCGGCGCGCTCCTAGCAGCCGGCCCGATGCTGGAGGAGGCACTAACGCTAGCCA
AGTGACTATTCTTTCTCTTTCAGCTGTTCTTGTCTTCACAATGCTCACTGATGGTAGTCTGACGAGGTAAAACCAGTTAT
GAAACCTTTT-TCTTGTGTAAAAAGTGCGTTGTTGTGGTATGATTAGTGCTTCAACTCAGATGTGGTATG----------
-TCAGAAGTTAATGTGTAGACGTAGTAGATGATGATATGAGGGGATCGGTAGACAGTGGATGGGGGAAATCCCATCCTAT
CCACGTCGGTTGCAG---TCCGACTGGAAATTTTGTTAGTGCCTGATACATCACAGAAGATGATATAGCTAGCTAGATGT
AAATACATGTTCTGTGATTGTATCTTGTACTGTCTCTGAATCCCTCCCAAGTATTATATACAGACAAATAAAGTCATATT
ATGC-------TGGTGTGCTGTCTGGCTTTGTTGTTTTGTTGACGCTTCCAACGGGCGTTTCCGCTGTTTTGTTGGCTTC
ATCATGTGTAACAATCTGTTGTGTTGCAGCCAAGGAGTTTTACATGGTCGTCTCTCACTCTTGCAACTTTCTCCCATGTC
AATGAATGGATGTTACCAAAAGTTTGGCCGCTCGGGAATCTG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>SNPs
---------------------SS------------------------------S--S------------S----------
-----S-----------------S-----------------S--------------------------------------
-----------SS------S----------------------S-------S-S------------S--------------
-S--S------------------------------------S-S------------------------S-----------
-----------------------------S----S----------------------------S----------------
----S--------------------S------------------------------------------------------
------------------------S------------------------------------------SSS----------
-S-----------------S--------S---------------------------------------------------
-------SSSSSSSS-----------S--SSSSSSSS---------------S------------S------S-------
---S------S------SSS----------------S---------S---------------------------------
-----------------S-S---S--------------------------------------------------------
----------------S--------------------S--------S---------------------------------
------------------S-------S-SS--------------------------------------------------
------------S-S-------------------------------------------------S---------------
------------S----------S----S-------------------S---SSSSS-----------------------
------------------------------------------------S--SS---------------------------
--------------------------------------------------------------------------------
---------S--------S----------------------------------------------------------S--
--------------------------------------S-----------------------------------------
------SS-S-S------------------------------------S--------------------------S----
------------S----------------------------------S--S----S------------------------
-----S-----------------------S--------------------------------------------------
-S------S-S----------------------------SS------------S--------------------------
-------------S-----------------------S-----------------S----SS------------------
-------------------S------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-----------------------S-----------------------------S-------S------------------
----------------------------------------------S---------------------------------
---------------------------------------------------------------------------SS--S
S---------S---------------------S-S---------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------S----------------------S------------------------------
--------------------------------------------------------------------------------
------S-----------------------------S-------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
---------------S----S-----------------------------------------------------------
---------------------------------------------------------------------------S----
-------------------------------------------S--S---------------------------------
---------------------------------------------------------------S----------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
------------------------------------------------------S-------------------------
------S---------------------------S---------------------------------------S----S
--------------------------------------------------------------------------------
-S-----------------------S------------------------------------S-----------------
---S---------SSSSS-----------------------------S--------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S-S--------------------------
------------S---------S--------------------------------------------------------S
--------------------S--------------------------------S------SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1053
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------AAAAACC
CTGAACCCCGAGG-------------------------------------------------------------------
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----------------------------------------------------------------
>reverse_2690
--------------------------------------------------------------------------------
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-------------------------------------------------GTTTCTATGCAGGGCCGTGT-----------
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----------------------------------------------------------------
>forward_1940
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CGCTTACACATTGCCTGGAC------------------------------------------------------------
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----------------------------------------------------------------
>reverse_3200
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
GAGATGACAAGGCAGGCAG-------------------------------------------------------------
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----------------------------------------------------------------
>forward_2958
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---------------------------------------------------------ACAAGCCTCTGATCACTGTCA--
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----------------------------------------------------------------
>reverse_4776
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-------------------------------------------------------CTCCGAGGAGAAGGGAGGAA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
