>input_sequence_26343
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------------------------------------------------------------------------------GT
ATAATTGGGCCGGGCCAGTGGA-GCGATCC---------------------GCTCGACATTATGACGCAACGAGCGTCCG
TCCAATAGGGATTTCCTGGGCCTAGGGCCTACGACACGGCCCCGTCCGTGGTGGGCACGTTTTAGCTTGGCCCGATCCGT
GCCAGCCCATCTCGCCAGGTTTGGGTACCACACGCGTCTTGCCTCATCAAAAAGGAAAAAAATCTGCCGATGTGCAGCAC
GATCTCCGTCGGCCACAAAATTCCCCATCGGTCATCCATAGGAAAACCTAGCCGCCCCCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTACTGCCATAACAACCATGT
CGGGTGATGCCGGCTGGCCGACTCTGCCGGGCCGCCTCGACGATGAAGATGGTGCCAGATTGCCGCCCGAGTGTCTGCTG
GACCGGCGCGTTCGCACGGACTTCGACGATGACGATCAGCAAGACCTCATCGCCTTGCAACCCTTCAAAATCCTGAGATG
TGTGTACAAGAAGGCGTTGGGGTTTCCATCCGAGCTGCAGACCCAGGCGGATGAGATGGTTCAGACCCTACAAATCGGTG
TGCACCTCGCCAAGTCGCCGCCGGGTTTGTCCTGTCTGGGCCTTCGAGGCGGCAGCCCGATGACCAACATCGAAACCGTC
CAGGACAGCATCGTCGTCCTCACCACCACTTTCCTCCATGATTTTGACTACACCTTCTATCTGGTCTATGAAGCCTCCAG
TGGTTCGCTCCACATGATCCCCATGCCAGAAAATCCTTGTTTCATTCTCACAGGGCTCAGTGCTAGCATGCTCATCGCGA
GGTCATTCTACACTGCCGACTACGCGCTGGTTGTATTGGGCAAGCTGGACGGGCAAGAGGGGGAT-----GTTCCGTTGG
TGTGGCTGTCTTCATCCTCGTCACCATCTTGGTCTGAGATCAAGACCACCGTCTTCAGCCAACCCCCCTCATTGATGCTG
CACTATGCTGATATGGGCTTTACTATCGGATCCATGGCCTGCTGGGTGGACCTCCTGCGCGGTGTCGCATTCTCTTGGTG
CAACACCCTCTTCCCCAAAGACTGTCGCAAGGAACCCACGCTTAACTTTGGCTTCTTT----TCCTTGCCCAGAGAGTTG
CCTGGAGCAGATCACTGTCGCGGCAACACCCGGGTGGCACAGCCAGAAGCCTACCGCACCATAGGCGTCGTCCAAGGTTT
CATCAGGTTCGTCTCCATCGACGGCTTTCTCGACTATGTCGACCTCAAGGACCGCACCTTGACAGTCTGGAAGCGAACGT
TGAACCGTGTGTGGCAGTTGGAGTACAAGCTCAGTCTCGAGACCCTATGGGGGCTCCAGGGATTCGGCGACTTGCCAAAG
AACCTAACTCCCATGTACCCTCTCCTTAGCACAGAGAATACGGATATTGTCTACTTTGCACTTGGGGAATATCTGGAGAA
CCGGCGCAGGTGGAAGTTTATCCCAATATGTGCACACTATCTACTCGCGGTCAACATGCAGAGCAACACAGTCCAGGCTT
CCATATCTCTCGCAGACTGTTTTGGCAGTCCTGACATCCCAGACCTTGTTTCTTCTAGTTTCAGCCGGTATGTCCATGTC
GTGGGGCATGATCTACACATTATGATGATGGACACGATGAAGCAAATGGCGTCGATCCATTTGGACCCCATTGACTATGA
TGAAAGGGAGGCTCGGAAGGTGATGAGGGAGAGCCCATTCAACTGGCAAGGAACTTTGAAGGACAAACCTATCTTTTATC
CAGCTCGCTACTACTCGCAACCATCATTGCTTCGTCTCACCCAATCAGGTAGTAGCCTGCTAATCAAACATTCATGTCAT
TAACTGTGTAGAATAGTGCTCAACATTATTTTTGTCACATGTGTAGCTTGAATTAATATGACATTTATTCTCGGTGCTGA
AGATATTTACTTCCTTTTCACAGCCACTGCAGACATCATTCCGGAGATATCAGGGTGACATGTTGTCTTTTTGGTAAGTG
CATTCCAATTCTTTCTGATTTAAGCCTCTGAGATTCCAAAATACTAAAAAACTAAACTCTGCTTCACCGCGTTTACAAAA
TTCAAACTCTCAAAGAAAAAGCAAAAAACATTCTAGAAACATTGCACAAAGGGAAAAGTACACTGATGCAGGTCAGCTTG
CAGGTGGGATGACTTGCGGGCATCCCGCATCTTTCCACATAATTATGTGGGACTAAACGGGCTGCCAACATAATATATGT
CGGTTGCCGCATACCCACTGACTACACGAAAGAACAATTGTGGGCTAGTGATTGTACAGCATGTCCACCTCCCATAGCAG
TACAAAACGTACCCACATATTCCACATACCGCATACTCCACT----ATAGGCTGTAGCAGTACATTATTTGAGGACAGAG
CATGGTGGTACACAGGCTAGAGGATACACAGCTAAAACCTGTAGGTCAAAACATCTAGA---------------------
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>chr5B_1_TraesCS5B01G513800
CGCCGGCTGCAGGCGCCGGTTTGCGGAAAACAGTATGAACCGGCGCCTGCAGCGCTAAATAGGAAATGCCATCGAACCCA
GGACCTTGCAACAACTTACTACGTCCGTAGCCACAGTAATACATTCGACTTCATGTCCAAGATAGCATCCGAGTTGATGT
GAACAATGAGCCGCGATAGATTTTAACTTATTTTCAAATTTCAGACATTATTTCTTTGAAAAAATAAATTTCTCCAGCAA
CACCAACATTTTTTGAAGAAAGAGAAAGAAAATTTAATAAATAAACATTTTTTGAATTTACG---ATTTTTTTAGAAACG
TGAACATTTTTTGAAAAACAGGAAAAGACTTGAAAAGTTGAACA--TTTTTTGAGAATAAGGAACATTTTT--TCCAAAT
CATGAACA-TTTTTTAGAACAACGAACATTTTCTCCAAATCATGAACATTTTTTGTATTTGCGAAATTTTTTTGGAAACC
TGA----TAC--TTTTAATTTGTGAACAAATTTGGCAGGCTGAAACATTAATTGAAATTACCAAACATTTTTTAGATTTA
TG--AAAAAATGCA-------AACATTTTTTAAAT-TCTCATACTA-TTTTGAGTGTCAGAATGAATTTTCAAAACGTGA
GCAATTTTAAAAATCTAGAACGAAATTAGAAGCCCGGAACATTTTCTCAAGTTTCCAAACATTTTTTGAAA-CCCGGAAC
AAATTTTCAAAACATGAACATTTTCAAAAGTTGCAAAC--AATTTTTCTAAACGGGAACATTTTTTGAAATTTCCCGAAT
TT-CCGAAATTTGTGTACAAAAACTTAAGATGCGAACATTTTTCAAATTTCTGAAATTTTGTTGAAAAA-GAAAACAAAC
AGGCAAACAGAAAAGGGAAAAA-CGAAAAA---GAAAATACAAGTGGAAAAAGGAAAAAAAACAGTA----AAAAACCGG
TTCAGAGAACCTTCTGGAAGGTTCCCAAAACGCTTAAAACCAGATAGAATTGCTAGAAGGTTCCTAAAACCGAATCACGT
ATAATTGGGCCGGGCCAGTGGA-GCGATCC---------------------GCTCGACATTATGACGCAACGAGCGTCCG
TCCAATAGGGATTTCCTGGGCCTAGGGCCTACGACACGGCCCCGTCCGTGGTGGGCACGTTTTAGCTTGGCCCGATCCGT
GCCAGCCCATCTCGCCAGGTTTGGGTACCACACGCGTCTTGCCTCATCAAAAAGGAAAAAAATCTGCCGATGTGCAGCAC
GATCTCCGTCGGCCACAAAATTCCCCATCGGTCATCCATAGGAAAACCTAGCCGCCCCCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTACTGCCATAACAACCATGT
CGGGTGATGCCGGCTGGCCGACTCTGCCGGGCCGCCTCGACGATGAAGATGGTGCCAGATTGCCGCCCGAGTGTCTGCTG
GACCGGCGCGTTCGCACGGACTTCGACGATGACGATCAGCAAGACCTCATCGCCTTGCAACCCTTCAAAATCCTGAGATG
TGTGTACAAGAAGGCGTTGGGGTTTCCATCCGAGCTGCAGACCCAGGCGGATGAGATGGTTCAGACCCTACAAATCGGTG
TGCACCTCGCCAAGTCGCCGCCGGGTTTGTCCTGTCTGGGCCTTCGAGGCGGCAGCCCGATGACCAACATCGAAACCGTC
CAGGACAGCATCGTCGTCCTCACCACCACTTTCCTCCATGATTTTGACTACACCTTCTATCTGGTCTATGAAGCCTCCAG
TGGTTCGCTCCACATGATCCCCATGCCAGAAAATCCTTGTTTCATTCTCACAGGGCTCAGTGCTAGCATGCTCATCGCGA
GGTCATTCTACACTGCCGACTACGCGCTGGTTGTATTGGGCAAGCTGGACGGGCAAGAGGGGGAT-----GTTCCGTTGG
TGTGGCTGTCTTCATCCTCGTCACCATCTTGGTCTGAGATCAAGACCACCGTCTTCAGCCAACCCCCCTCATTGATGCTG
CACTATGCTGATATGGGCTTTACTATCGGATCCATGGCCTGCTGGGTGGACCTCCTGCGCGGTGTCGCATTCTCTTGGTG
CAACACCCTCTTCCCCAAAGACTGTCGCAAGGAACCCACGCTTAACTTTGGCTTCTTT----TCCTTGCCCAGAGAGTTG
CCTGGAGCAGATCACTGTCGCGGCAACACCCGGGTGGCACAGCCAGAAGCCTACCGCACCATAGGCGTCGTCCAAGGTTT
CATCAGGTTCGTCTCCATCGACGGCTTTCTCGACTATGTCGACCTCAAGGACCGCACCTTGACAGTCTGGAAGCGAACGT
TGAACCGTGTGTGGCAGTTGGAGTACAAGCTCAGTCTCGAGACCCTATGGGGGCTCCAGGGATTCGGCGACTTGCCAAAG
AACCTAACTCCCATGTACCCTCTCCTTAGCACAGAGAATACGGATATTGTCTACTTTGCACTTGGGGAATATCTGGAGAA
CCGGCGCAGGTGGAAGTTTATCCCAATATGTGCACACTATCTACTCGCGGTCAACATGCAGAGCAACACAGTCCAGGCTT
CCATATCTCTCGCAGACTGTTTTGGCAGTCCTGACATCCCAGACCTTGTTTCTTCTAGTTTCAGCCGGTATGTCCATGTC
GTGGGGCATGATCTACACATTATGATGATGGACACGATGAAGCAAATGGCGTCGATCCATTTGGACCCCATTGACTATGA
TGAAAGGGAGGCTCGGAAGGTGATGAGGGAGAGCCCATTCAACTGGCAAGGAACTTTGAAGGACAAACCTATCTTTTATC
CAGCTCGCTACTACTCGCAACCATCATTGCTTCGTCTCACCCAATCAGGTAGTAGCCTGCTAATCAAACATTCATGTCAT
TAACTGTGTAGAATAGTGCTCAACATTATTTTTGTCACATGTGTAGCTTGAATTAATATGACATTTATTCTCGGTGCTGA
AGATATTTACTTCCTTTTCACAGCCACTGCAGACATCATTCCGGAGATATCAGGGTGACATGTTGTCTTTTTGGTAAGTG
CATTCCAATTCTTTCTGATTTAAGCCTCTGAGATTCCAAAATACTAAAAAACTAAACTCTGCTTCACCGCGTTTACAAAA
TTCAAACTCTCAAAGAAAAAGCAAAAAACATTCTAGAAACATTGCACAAAGGGAAAAGTACACTGATGCAGGTCAGCTTG
CAGGTGGGATGACTTGCGGGCATCCCGCATCTTTCCACATAATTATGTGGGACTAAACGGGCTGCCAACATAATATATGT
CGGTTGCCGCATACCCACTGACTACACGAAAGAACAATTGTGGGCTAGTGATTGTACAGCATGTCCACCTCCCATAGCAG
TACAAAACGTACCCACATATTCCACATACCGCATACTCCACT----ATAGGCTGTAGCAGTACATTATTTGAGGACAGAG
CATGGTGGTACACAGGCTAGAGGATACACAGCTAAAACCTGTAGGTCAAAACATCTAGATTAAATACGTTTGTGTTCATT
CCAGGATAATTTCACCAAGGTGGCATGTTGCCA-TTTTTGCTAAGAGTCTATTTTTTTGCGAATTCATTTTTTTCTTAGA
GTCAATGCGTGGTCATTTTGCATATTTAGGTTCTAAACCGTTCGCCCTTCAACG-AATGGTGCATAATCTGACTTTAAGT
GACTCTCGCAACATATTCATAATTTCATATTGCACTTTAGTTTTCTTAAAAGCGCTGGAACGATTTCATCTTTGACATAT
ATAAAGAAGTGCTTCTTGGTCATATATGTCTTGCCTTGGTTGCTAGTATTTCATGATTACCTTGTTTAGCAATTGACATC
GTTT-CAAAATCCCTTTGTATGAACTTTTCACATGAATATGAGCTCGCAATTGATGATTTTCTGTAGAGTAAATCGGCTC
GGAAAAAGAG-AAAAAACTACTTTTAGCTGGCGTATTGTTGGTTGGTTACAAATTCCCGTGCAGTCTTCCAATCATATTG
AGCAGCATCTTCAGAGACTATGTTCATGACGGTACAGATGTAGTAGTAGAAGCATGGGTACAGATGCCAAATCTGTCAAG
GCTCTCCA--------GAGACCTTTTAATAATATAGTTCAATGCAAGGAATGAATAGAGGCAACATCTAATTAGACTATT
AGTTTCCCTACCATAATAATTGGTAATCATATAGCTCAAAATTTATCACCATAGAAAATATTAATACTGGGTGATGCCAT
GAAGCATTGTTAGTGTCAGAAACATAACAAATCTTGGAAAGAAATGGCCAATTGCACAAGTTG--TTTG--AATATTTGC
ACAAGTAATTATGTTACATGATTTTCTTATGAAAATGGATTAATCAAATTCAATTTGTCATACCGTCGTACTCTCCTTAA
CCTTCTCTACTGATTTGATAGTAATA-TTTTCATTCCTAAATACTTAAACAGTAGGCCCTGACATGAGCAGTGCTGACTC
AAAAGGACTCATTTTTTTTCCTAAACAACTACAGCT
>chr4B_71
----------------------------------------------------------------------ATCGAACCCA
GGACCTTGCAACAACTTACTCCATCCCTAGCCACTATAATACATTCAACTTCGTGTCCAAGATAGCATCCGAGTTGATGT
GAACAATGAGCCGCCATAGATTTCAACTTATTTTCAAATTTCCTACGTGATTTCTTCGAAAAAATAAATTTCTCCAGCAA
CACCAATATTTTTTGAAGAAAGAGAAACAAAATATAATAAATTAACATTTTCTGACTTTATGAACATTTTTTTCGAAAGG
TGAACATTTTTTTAAAAACGGGAAAAGACTTGAAAAGTTGAACA--CTTTTTGAGAATAACGAACAATTTGTATCCAAAT
TGTGAACA-TTTTTTAGAACAACAAACATTTTCGCCAAATCACGAACATTTTTTGAGTTTGCGAACAAAATTTGAAAACG
TGA----TAT--TTTTAATTTGTGAACAAATTTGGAAGGCTGAAACATTAACTGAAATTCCCAAAGATTTTTTAGATTTA
TG--AAAAA-----T---GCAAACATTTTTT-AAATTCTCATACTA-TTTTGAGTGTCAGAATGAATTTTCAAAACATGA
GCAATTTAGAAACTCTAGAATGAAATTACAAACCCGGAACATTTTCTCAAGTTTCTGAACATTTTTTGAAA-TTGCGGAC
AAATTTCCAAAATATGAACATATTCAAAATTTGCAAAC--AACTTTTCTAAACAGGAACATTTTTTGAAATTTCCCAAAT
TT-CTGAAATTTGTGAACAAAAACTTAAAATGCGAACATTTTTCAAATTTCTGAACATTTGTTGAAAAA-GAAAATTAAA
AGAGAAACATAAAAGGGAAAAA-CAAAAAA---GAAAACACAAGTGTAAAAAGGAAAAAAAAGA------CAAAAACCGG
TTCAGAGAACCTTCTGGAAGGTTCCCAAAACGCAT-AAACCAGACAGAACTGCTAGAAGGTTCCTAAAACCGAATCACGT
ATAATTGGGCCAGCCCAGTGCA-GCGATCCCGCTCGA-------------------------------------------
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>chr6B_71
----------------------------------------------------------------------ATCAAACCCA
GGACCTTGCAAGAACTTACTACGTCCCTAGCTACTGTAATACCTGCGAC-TCATGTCCAAGATAGCATCCGAGTTGATGT
GCACTATGACCCGCGACAGATTTCAACTTATTTTCAAATTTCGGACGCGATTT-TTTGAAAAATTACATTTCTCCAGCAG
CACCATCATTTTTTGAAGAAAGAGAAACAAAATTTAATAAATAAACATTTTTTGAATGTACGAACATTTTTT-AGAAACG
TG-ACCTTTTTTGAAAAACAGGAAAAGACTTGAAAAGTTGAATA--TTTTTTGAGAATAACAAACATTTTT--TCCAAAT
CATGAACA------------------------------------------TTTTTTATTTATGAACAAAATTTGAAAACG
TGA----T----TTTTATTTTGTGAACAAATTTGGAAGGCTGAAACATTAATTGAAATTCCCAAAC------TAGATTTA
TGAAAAAAA-----T---GCAAACAATTTTT-AAAT-CTTATACTA-TTTTGAGTGTCAGAATGAATTTTCAAAACGTGA
ACAATTGCAAAATTCTAGAACAAAATTAGAAACCCAGAACATTTTCTCAAGTTTCT--ACATTTTTTGAAA-TTGCGAAC
AAATTTTCAAAACATGAACAATTTAGAAATTTGCGAAC--AATTTTTCTAAATGGGGACATTTTTTGAAATTTCCCAAAT
TT-CATAAATTT-TGAACAAAAACTTAAAATGCAAACATTTTTCAAATTTCTGAACATTTGTTGAAAAAATAAAATACAA
AGAGAAACAGAAAAGCGAAAAA-CGAAAAA---GAAAACACAAGGGGAAAAAGGAAAGAAAGACAGACAAAACCCA----
--------------------GTTCCCAAAACGCATAAAACCAGACAGAACTCCTAGAAGGTTCCTAAAACCGAATCACG-
-TAATTGGGCCGGCCCAGTGCATGCGATCCCGCTCG--------------------------------------------
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>chr6D_71
----------------------------------------------------------------------ATCGAACCCA
GGACCTTGCAAGAACTTACTACGTCCCTAGCCACTATAATACCTGCGAATTCGTGTCCAAGATAGCATCCGAGTTGATGT
GAACTATGAGCCGCGACAGAGTTCAACTTATTTTCAAATTTCGGACGTGATTTCTTTGAAAAATTATATTTCACCAGCAA
CACCAACATTTTTTGAAGAAAGAGAAACAAAATT-AATACATGAACATTTTTTGAATTTAGTAACA-TTTTTTAGAAACG
TGAACATTTTTTGAAAAACAGGAAAAGACTTGAAAAGGTAAATGTTTTTTTTGAGAATAATGAACATTTTT---------
--------------------------------TTCCAAATCGTGAACATTTCTTTTATTTTCGAACAAAATT-GAAAACG
TGA----T-T--TTTTAATTTCTGAACAAATTTGGAAGGCTGAAATATTAATTGAAATTCCCAAACATTTTTTAGATTTA
TG--AAAAAATGCAA-----AAAAATATATT-AAA-TCTCATACTA-TTTTGAGTGTTAGAACGAATTTTGAAAACGTGA
GCAATTAAAAAATTCTAGAACAAAATTAGAAACCCAGAACATTTTCTCAAGTTTCAAAACTTTTTTTGAAA---------
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>chr3D_100
--------------------------------------------------------------------------------
-------------------TACGTCCCTAGCCACTATAATATCTGCGACTTCGTGTCCAAGATAGCATCCGAGTTGATGT
GAACTATCAGTCGTGATAGATTTCAAATTATTTTCAAACTTCGGACGGGATTTCTTTGAAAAA---CAATTCGCCAGCAA
CAACAACATTTTTTGAAGAAAGAGAAACAAAATATAATAAATAAACATTTTTCGAACTTACAAACATTTTTT-ATAAACG
TGAATATTTTTTCAAAAACAGGAAAATACTTGGAAAATC-----------------------------------------
---GAACATTTTTTGAGAATAATGAACATTTTTTC-AAATCTTGAACATTTTTTGTATTTGCGATTTTTTAT-GAAAACG
TGA----T-T--GTTTAATTTGTGAACAAATTTGGAAGGCTGAAACATTAACTGAAATTCCCAAACATTTTTTATATTTA
TG--AAAAA-----T---GCAAACATTTTTT-TAATTCTTGTATTATTCG-GACTGTCAGAACGGATTTTCAAAACGTGA
GCAATTTAAAAATTCTAGAACAAAATTAGAAACCCAGAACATTTTCTCAAGTTTCCGAAATTTTTTGGAAA-TTGCGATC
AAAATTTCAAAACATGAACATTTTCAAAATTTGCGAAC--AAATTTTCTAGATGGGAACATTTTTTGAAATTTCCAAAAT
TT-TCGAAATTTATGAATAAACACTTAAAATGCGAACATTTTTTTAATTTCTGAACATTTGTT--AAAAAGAAAATAAAA
ATAGAAACAGAAAAGGGAAAAT--GAAAAA---GAAAACACAAGTGGAAAAAGAAAAAAACAGA------CAAAAACCGG
TTCAGAGAACCTTCTGGAAGGTTCCCAAAACGCATAAAACCAGACAGAACTGCTAGAAGCTTCCTAAAACCGAATCACC-
-TAATTGGGCCGGCCCAGTGCA-GCGATCCCGCTCGATCCTGTGTGCGTTTGCTCGACATTATGACGCAACGAGCGTCCT
----ATAGGGATTTCC----------------------------------------------------------------
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>chr6D_390
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----------------------------------------------------------------------------AAAA
CATGAACATTTTTTGAAAATAACGAACAATTTTTCCAAATCGTGAACAATTTTTGTATTTGCAAACAAAATTTTAAAATG
CGACTTCT-T--TTTGAATTTGTGAACAAATTTGGAAAGCCAGAAGATTACTTGAAATTCGGAAACAATTTTTAGATTTG
TG--AAAAAAATAAAAAAGCAAACATTTTTA-AATTCCCACAACTTTTTATGAATTTCAGAATAAATTTTCAAAACATGA
ACAATTTTCAAATTCGTAAACAAAATTAGAAACTGGGAACAATTTTTGAAGTTCCCAAACATTTTTTGAAT-TTACGAAC
AAATTTTCAAAACATGAACATTTTTAAAATTTTCCAACAAAATTTTG--AAATGAGAACATTTTTTTAAATTCCCAAAAA
ATATCTAAATTT-GTGAAAGAAAATTAACATGCTATAATTTAAAATATTTCTGAACATTTGTTG-AAAAAGAAAATAAAA
AGAGAAACAGAAAAGGGAAAAA-CGAAAAT---TGAAAGAAAAATGGAAAA-----------------------------
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>chr7D_390
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----------------------------------------------------------------------------AAAA
CATGAACATTTTTTGAAAATAACGAACAATTTTTCCAAATTGTGAACAATTTTTATTTTTACGAAAAAAATT-GAAAGCG
TGAATATT-T--TTTGAATTTGTGAAAAATTTTGGAAAGCTTAAACAATATTTGAAATTCCCAAACATTTTTTAGATTTG
TA--AACAAAAACAT---GCGAACATTTTTA-AATTCCCAGAACTTTTTTTGAATTACATAATGAATTTTCAAAACATGA
ACATTTTTCAAATTCATGATCAAAATTAGAAACTTGGAGCATTCTTTCAAGTTCCCGAATTTTTTTTAAAATTTGCGAAC
AAATTTTCAAGACATGAACATTTTGAAAATTTGTGAACAAAATTTTG--AAAATGGGAATTTTTTTAAAGTTCCCCAAAT
TG-TCGGAGTTTGTGAACAAAATTTTAAAATGCAAACATTTTCTAAATTCCTGAAAATTTGTTGG-AAAACAAAATAAAA
AGAGAAACAGAAAAGGGAAAAA-CGAAAAAAAATAAAAATAAAAAGGAATAGGAATAGGAAAAAAAACAGCAAAACCCGG
TTCAGAGAACCTTCTGGAAGGTTCTCAAAACCGATAAAACCAGA------------------------------------
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>chr5B_396
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--TGAACATTTTTTGAGAATAACGAACACTTTTCCAAAATCGTGAACATTTTTTGTATTTGCGAACAAAATTTGAAAACT
TGA----T-TTATTTTAATTTCTGAATAAATTTGGAAGGCTGAAACATTATACAAAGTTCCCAAACATTTTTTAGATTTA
TG--AAAAAA--CAT---TCAAACATTTTTT-AAATTCCAATACTATTTTTGAATTTCAGAAAGAATTTTCGAAACATGA
GCAATTTAAATTTTTTTGAACAAAATTAGAAACTCAAAACATTTTATCAAGTTTCTGAACATTTTCTGAAA-TTGTGAAC
AAATTTTCCAAACATGAACATTTTCAAAATTTATGAAC--AATTTTT--TAATGGGAACGTTTTTTGAAATTCCCCAAAG
TT-TCGAAATTTGTGAACAAAAACTTAAAATGTTCACATTTTTCAAATTTCTGAACATTTGTTG-AAAAATAAAATAAAA
AGAGAAACATAAAAGGGAAAACCCGAAAAA---TAAATCACAAATGGAAAAAGAATAA-------------AAAATCCGG
TTCAAAGAATCTTTTGGAAGGTTCCCAAAACCCATAAAACCAGACAAAACTGCTAGAAGGTTCCTAAAGCCGAATCACG-
-TAATTGGGCCGGTCCAGTGCATGCGATCCCGCT----------------------------------------------
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>chr5D_1075
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--------------CCTGGGCCTAGGGCCTACGACACGGCCCCGTCCGTGGTGGTCACGTTTTAGCTTGGCCCGATCCGT
GCCAGCCCATCCCGCCAGGTTTGGGTACCACACGCGTCCATCTG-------------------CTGCCGATGTGCTTG--
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-------------------------------------------------------------CCTTCAAAATCCTGAGATG
TGTGCACAAGAAGGCGTTGGGGTTTCCGTCCGAACTGCAGACCCAGGCGGATGAGATGGTTCAGACCCTACAAATCGGTG
TGCACCTCGCCAAGTCGCCGCCGGGTTTGTCCTGTCTGGGCCTTCGAGGCGGCAGCCCGATGACCAACATCGAAACCGTC
CACGGCAGCATCGTCGTCCTCACCACCACTTTCCTCCATGATTTGGACTACACCTTCTATCTGGTCTATGATGCCACCAG
TGGTTCGCTCCACATGATCCCCATGCCACCAGTGG-----TTCATTCTCACAGGGCTCAGTGCTAGCATGCTCATCGCGA
GGTCATCCTGCATTGCCCACTACGCGCTGCTTGTATTGGGCAAGCTGGACGGGCAAGAGGGGGATATCATGTTCCGTTGG
TCTGGCTGTCTACATCCTCCTCACCATCTTGGTCTGAGATCAAGACCACCTTCTTCAGCCAACCCCCCTCACTGATGCTG
CACTACGCTGATATGGGCTTTACTATCGGATCCATGGCCTGCTGGGTGGACCTCCTGCGCGGCGTCGCATTCTCTTGGTG
CAACACCCTCTTCCCCAAAGACTGTCGCAAGGAACCCACGCTTAAGTTTGGCTTCTTTTCCTTCCTTGCCCAGAGAGTTG
CCTGGAGCAGATCACTGTCGCGACAACACCCGGGTGGCACAGCCACAAGCCTACCGCACCATAGGCTTCGTCCAAGATTT
AATCACGTTCGTCTCCATCGACGGCTTTCTCGACTATGTCGACCTCAAGGACCGCACCTTGACAGTCTGGAAGCCAACGT
TGAACCGTGGGTGGCAGTTAGAGTACAAGCTCAGTCTCGAGGCCCTATGGGGGCTCCAGGGATTCGGCGACTTGCCAAAG
AACCTAACTCCCATGTACCCTCTCCTTAGCACAGAGAATACGGATATTGTCTACTTTGCACTTGGGGAATATCTGGAGAA
CCGGCGCAGGTGGAAGTTTATCCCAATATGTGCACACTATCAACTCGCGGTCAACATGCAGAGCAACACAGTCCAGGCTT
CCATATCCCTCGCAGACTGTTTTGGCAGTCCTGACATCCCAGATCTTGTTACTTCTAGTTTCAGCCGGTATGTCCATGTC
GTGGGGAC------------------------------------------------CCATTTGGACCCCATTGACTATGA
TGAAGGGGAGGCTCGGAAGGTGATGAGGGAGAGCCCATTCAACTGGCAAGGAACTTTGAAGGACAAACCTATCTTTTATC
CAGCTCGCTACTGCTCGCAACCATCATTGCTTCGTCTCACCCAATCAGGTAGTAGCCTGCTAATCAAACATTCATGTCAT
TAACTGTGTAGAATAGTGCTCAACATTATTTTTGTCACACGTGTAGCTTGAATTAATATGACATTTATTCTCGGTGCTGA
AGATATTTACTTCCTTTTCACAGCCACTGCAGACACCATTCCGGAGATATCAGGGTGACATGTTGTCTTTTTGGTAAGTG
CATTCCAATTCTTTCTGATTTAAGACTC-GAGATTCCAAAAAACT-AAAAACTAAACTCTGCTTCACCGCGTTTACAAAA
TTCAAACTCTCAAAGAAAAAGCAAAAAACA--CTAGAAACATTGCACAAAGGGAAAAGTGCACTGATGCAGGTCAGCTTG
CAGGTGGGATGACTTGTGGGCATCCCGCATCTTTCCACATAATTATGCGGGACTAAACGGGCTGCCCACATAATATATGT
CGGTTGCCGCATACCCACAGACTACACGAAAGAACAATTGTAGGCTAGTGATAGTACAGCATGTCCACCTCCCATAGCAG
TACAAAACGTACCCACATATTCCACATACCGCATACTCCACTATATATAGGCCGTAGCAGTACATTATTTGAGGACAGAG
CATGGCGGTACACAGGCTAGAGGATACACAGCTAAAACCTGTAGGTCGAAACATGTAGATTAAATACGTTTTTGTTCATT
CCAGGTTAATTTCAGCAAGGTAGCATGTTGCCATTTTTTGCTAAGAGTCTATTTTTTTGCAAATTCA-TTTTTTCTTAGA
GTCAATGCGTGGTAATTTTGCATATTTAGGTTCTAAACCGTTCGCCCTTGAACGGAATGGTGCATAATCTGACTTTAAGT
GACTCTCGCAACATA--------TTCATATTGCACTTTAGTTTTCTT-AAAGCGCTGGAACGATTTCATCTTTGACATAT
ATAAAGAAGTGCTTCTTGGTCATATATGTCTTGCCTTGGTTTCTAGTATTTCATGATTACCTTGTTTAGCAATTGACATC
GTGT-CAAAATCCCTTTGTATGAACTTTTCACATGAATATGAGCTCGCAATTGATGATTTTCTGTAGAGTAAATCGGCTC
AGAAAGAGAAAAAAAAACTACTTTTAGCTGGCGTATTGTTGGTTGGTTACAAATTCCCGTGCAGTCTTCCAATCATATTG
AGCAGCATCTCCAGAGACTA-GTTCATGACGGTACAGATGTAGTAGTAGAAGCATGGGTACAGATGCCAAATCTGTCAAG
GCTCTCCA--------GAGACGTTTTAATA--ATAGTTCAATGCAAGGAATGAATAGAGGCAACATCTAATTAGACTATT
AGTTTCCCTACCATAATAATTGGTAATCATATAGCTCAAAATTTATCACCATAGAAAATATTAATACTGGGTGATGCCAT
GAAGCATTGTTAGTGTCAGAAACATAACAAATCTTGGGAAGAAATGGCCAATTGCACAAGTTTTTTTTG--AATATTTGC
ACAAGTAATTATGTTACATGATTTTTTTATGACAATGGAGTAATCAAATTCAATTGGTCATACCGTCGTACTCTCCTTAA
CCTTCTCTACTGATTTGATAGTAACA-TTTTCATTCCTGATTACTTAAACAGTAGGCCCTGACATAAGC-------ACTC
AAAAGGACTCATTTTTTTTCCTAAACAACTAC----
>chr4A_3103
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---------------------------------------------------TCGATCCATTTGGACCCCATTGACTATGA
TGAAGGGGAGGCTCGGAAGGTGATGGGGGAGAGCCCATTCAACTGGCAAGGAACTTTGAAGGACAAACCTATCTTTTATC
CAGCTCACTACTACTCGCAACCATCATTGCTTCGACTCACCCAATCAGGTAGTAGCCTGCTAATCAAACATTCATGTCAT
TAACTGTGTAGAATAGTGCTCAACATTATTTTTGTCACACGTGTAGCTTGAATTAATATGACATTTATTCTTGGCGCTGA
AGATATTTACTTCCTTTTCACAGCCACTGCAGACATCATTCCGGAGATATCAGGGTGACATGTTGTCTTTTTGGTAAGTG
CATTCCAATTCTTTCTGATTTAAGACTT-GAGATTCCAAAAAACT-AAAAACTAAACTCTGCTTCACCACGTTTACAAAA
TTCAAACTCTCAAAGAAAAAGCAAAAAACA--CTAGAAACATTGCACAAAGGGAAAAGTACACTGATGCAGGTCAGCTTG
CAGGTGGGATGACTTGTGGGCATCCCGCATCTTTCCACACAATTATGTGGGACTAAACAGGCTGCCCACATAATATATGT
CGGTTGCCGCATACCCACAGACTACACGAAAGAACAATTGTAGGCTAGTGATAGTACAGCATGTCCACCTCCCATAGCAG
TACAAAACGTACCCACATATTCCACATACCGCATACTCCAC----TATAGGCTGTAGCAGTACATTATTTGAGGACAGAG
CATGGCGGTACACAGGCTAGAGGATACACAGCTAAAACCTGTAGGTCGAAACATGTAGATTAAATACGTTTGTGTTCATT
CCAGGTTAATTTCAGCAAGGTAGCATGTTGCCATTTT-TGCTAAGAGTCTATTTTTTTGCAAATTCA-TTTTTTCTTAGA
GTCAATGCGTGGTAATTTTGCATATTTAGGTTCTAAACCGTTCGCCCTTCAACGGAATGGTGCATAATCTGACTTTAAGT
GACTCTCGCAACATA--------TTCATATTGCACTTTAGTTTTCTTAAAAGCGCTGGAACGATTTCATCTTTGACATAT
ATAAAGAAGTGCTTCTTGGTCATATATGTCTTGCCTTGGTTTCTAGTATTTCATGATTACCTTGTTTAGCAATTGACATC
GTGTTCAAAATCCCTTTGTATGAACTTTTCACATGAATATGAGCTTGCAATTGATGATTTTCTGTAGAGTAAATCGGCTC
GGAAAGAG-AAAAAAAACTACTTTTAGCTGGTGTATTGTTGGTTGGTTACAAATTCCCGTGCAGTCTTCCAATCATATTG
AGTAGCATCTCCAGAGACTA-GTTCATGACGGTACAGATGTAGTAGTAGAAGCATGGGTACAGATGCCAAATCTGTCAAG
GCTCTCCACTTCTCCAGAGACCTTTTAATA--ATAGTTCAATGCAAGGAATGAATAGAGGCAACATCTAATTAGACTATT
AGTTTCCCTACCATAATAATTGGTAATCATATAGCTCAAAATTTATCACCATAGAAAATATTAATACTGGGTGATGCCAT
GAAGCATTGTTAGTGTCAGAAACATAACAAATCTTGGAAAGAAATGGCCAATTGCACAAGTTG--TTTCTTAATATTTGC
ACAAGTAATTATGTTACATGATTTTCTTACGAAAATGGACTAATCAAATTCAATTGGTCATACCGTCGTACTCTCCTTAA
CCTTCTCTACTGATTTGATAGTAACATTTTTCATTCCTGATTACTTAAACAGTAGGCCCTGACATAAGC-------ACTC
AAAAGGACTCATTTTTTT-CCTAAACAACTA-----
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
--------------------------S-------S---------------------------------------------
-----------------------S------------------S---S-S-------------------------------
---------------------------S----------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------S----S
---------S-------------------------S-----------------------S--------------------
-------------------------------S------------------------------------------------
------------S------------------S----------------------------------------SSSS----
-----------------------------S----------------------------------------------S---
---------------S------------S---------------------------S------------------S---S
--SS----------------------------------S-----------------------S-SS--------------
---------------------------------S----------S----S------------------------------
-------------S------S----------------------------------------------------------S
SSSS--------------------------------------------------S-------------------------
-----------S--------------------------SSS-SSSSSSSSSSSSSSSSSSSSS------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
----S----------------------S-----S----------------------------------------------
--------------------------------------------------------------------------------
--S-S---------------------------------------S--------------------------S---S----
----------------------------SS-SSSSSSSSS----------------------------------------
------S--S--S----S-----------S--------------------------------------------------
-S---------S-------S------------------------------S--------------------S--------
-----S--------------------------------------------------------S-----------------
---------------------------------------------S----------------------------------
----------------------S----------------------S--------------------S---------S---
S----S--------------------------------------------------------------------S-----
---------S---------S---------------------S--------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
-------S-----------------------------------S------S-----------------------------
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
------------------------S---S------------S---S----------------------------------
------------------------------SS------------------------------------------------
----------------S-------------------------------------------------S-------------
------------------S----------------------S----------S---------------------------
--------------------------------------------------------------------------------
-----S-----------------------------------------S------S-------------------------
-----S--------S------S--------------------------------------S------S------------
-------------S------------------------------------------------------------------
---------------SSSSSSSS---------------------------------------------------------
-----------------------------------------S--------------------------------------
--S-----------------------------------------------------------------------------
-----S---S----------------------------------------------------------------------
----------S---------S-----------------------------------------------------------
------------------------------SS------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S---------------S------------------------
------------------------S-------------S-S------------------------S---SSSSSSS----
--------------------------------SSSS
>forward_46
--------------------------AAAACAGTATGAACCGGCGC----------------------------------
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>reverse_1937
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----------------CGGACTTCGACGATGACGAT--------------------------------------------
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------------------------------------
>forward_1301
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-ATCTCCGTCGGCCACAAAAT-----------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2795
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--------------------------------------------------------------------------GAACGT
TGAACCGTGTGTGG------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------
>forward_1956
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----------------CGGACTTCGACGATGACGAT--------------------------------------------
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>reverse_3159
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--------------------------------------GAAGCAAATGGCGTCGATCC----------------------
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>forward_2795
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-------------------------------------------------------ACCTTGACAGTCTGGAAGCG-----
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>reverse_3813
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----------------------------------------------------TGTACAGCATGTCCACCTCC--------
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------------------------------------
>forward_3084
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------------------------GCAGTCCTGACATCCCAGAC------------------------------------
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>reverse_4946
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-----------------------------------------------------------------GAGCAGTGCTGACTC
AAAAGG------------------------------
