>input_sequence_26281
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------ATGGTGTTTGTTCATGACGACAATGTTAATATAGGTTTAAGCCTTATTGTGG---TAGTATTTGCTGATTTTGT
TGGCGTTATAAAGTTGCATACCTATGTGTAAACGTTGTTACGGAATCATAATATGG------------------------
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----TAGTTTGGCATGGTAAAACCTTACCTGATGATGCATTCATTTGGCCTAGATTGATAATTTGGCCGTTCAATCTTAG
AATAATTTTCACAATTTGTTACCAACGTTGTTGCTTTAGTATCTTGCACATTCAGGTTAGAATGAGGCGGCAGGGACAGG
GACAGGGACAGGGACAGGGGCAATACGGGGATCCTAACATCAATTCCATGGTGTCTTCCCAGTTGCATCACTACCAGGCT
CAGCAAAGGGTTCAACAACTACCTGATAATAGTTACCCTGGAAGAGATCCTGGGCAAGCTGCTGGGGAGAACCAGTATAC
CACCCAGAAGGTGAGACAGAGCCAATGGGACAGAGGTGGGCCGAACATCCAGAATCAGATTTCACCATATGCATATAATG
ATGGTATGTAGTA------------------------------------------TGTACCCACACGCCTGTTTCAATTT
-------------------GTTGAAAAATCTAAGATGTCAACTTTTTTGGTGGCATAACTAGTTTATATGTGCACCCTAC
ACTTTGGACAGATTAGCA-TTTTTCCAAGAAATTTTGGACATATTAGTGGTTGTGTAGCTAGCATGGTAAACTGGTAGTA
TGTGTGAGAATGTGCTAGAAAATGTTATGTTTTGCATCTTGGTTACACTTCTGTGCTTTTGCACTGACGGATCCTGATGT
AGGTCAAAGTGCTGAGGGTAAACGATCCTTTTATGATGGACAACAATCTGATCTGAAGGTTGGTCTAGAAAAGCAACCAA
GAAAGGAATTGAGGGACCAGCCTCGTACCGATAAGATTGAAGCAAGGCGCGATGACTATAATCTTCCTCGTACATTTGAA
AGTCTAGAGCAGAGTTTTCGTGAAGACATCGTGGTCCTATCCAAGGAACTAAATGATGCAGAGGATGCTGAAAATACTAG
GCACAGGGAGGTATGTTCAAATA-TATTGCATGATTCTGCCTTGTCCTTCCTACCTGCCAAAAGTAGATTAACTGGACTT
GCAGATCGTTTTTTACCTTCCTGATATCAGTCATTGATATGTCCTACTATTGACAGGAAGTACTTATCCATTTTATGTCA
TTGATATGTCCTATTATTGACAGGAAGTACTTATCCATTTTATGAAAGGATTTAATATCATATGCCTTTTGCTTATTGAG
TTTCTGTTTGGTCCTGTTAGTCAATTGTGGTATGATTAGCCTTTTGAGTAACAATCCCACAGGTAGATGTTGGGAAACAT
CTAGTTTTGTGTTGCTACTTAAAAACTATAGATGTCTTCTCCCCTTGTTCTCAGTTATGTGCATAGACTTGTCAATTTCT
ATGTACATTCTCATTTTGCATGCCAATACCAGTAGTCTAGTACACACCCACATTAATCCATATTAGTCATCGGACGTGAA
CAACCCACATCTTGCAATGTAACTGCAGAGAACATGCAAGCTCGAGCAACCAATATAGGATTTAATACCAAGAAAAACTT
-GTAATACTTAGATATTGAAATGGGGTTCTCCC-CCCTTGCGCATCTATAGCTTA-TCATGTTTCCATTGGTTTACTCTA
TTAGGGCATCTCCAACGCTCTGCCCTTAAACGCCCGCAAACGTCCGG---------------------------------
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----GAAGCCTACTCTGGCCGCTGCGCTGCATTGAAGCGGCGTCGCTCTGCCTGCCCAGCCTATTTAAGTAGTGTTCCAG
CGC------------------------CTCCTCGCCGCAAACCCTCTCCACTCCTCCACA----------GCAGCAGCGA
CGGAGCGGACGACGACGGCTGCCCAGCCGGCTAGGACGGCCATGCGTATGAGGTCACCTTCCGGTACCTCCCGTAGGTTA
GTTTAGGTTTAAAAAAAAATAGTTAAACGGACAAAATATCGTCCGGTTTATGTAAATCATATTCAACTTTTATCCGG---
------------------TTCCATGAAATTTGTCCGTTTGGTTCAATTTTCGTTTAAAATGCGTGCGGACGATTAGGGCA
CATGGTTGGATGTCTGCTTCCGT-------------GTCTGCGGACGGATAGCGAGGCCGATTTGGGGGACGGCG-TTGG
AGATGCCCTTAGTAAGCTTAGATTTATCTTAGTGCTTGGTGTTGATTAAGGAATTGAGTCACTCTGAAGATTTTTGTGCC
TGTGTTAAAATTGCACACCCCACAGCATATGGTGGATCCTTGTATATATGCCTTTCCTATGACAACTTTTAAATCATCTT
TTATATGCCTTTTCTATGGCAACTTTTAAAGATCTAAACAATGGAACTTGTTGCAGTAATGTTGCCTCAACTACAATCAT
ACTTGTCAATGTTGCCCCAATTACAGCATG---------------ACATCATACTGTTGATAATGTTGCAGCACTGTCTC
TGAATCATAGAGTT----TTCTTTTTAAACTAGCATCATACACTATTAATATCTATCAAAGACAACTGCTGTTTTACATG
GTTCTCATGTCTGTGTGCAGAGATTGAACGAAATAAATGCACAGTATCATGAGAAACTATTGGCACTTCGAGCTCGGCAG
ACAGCCTATCGAGAAGAATTCCTGCGCAAAGAGTCTCTGGAACGCCAACAGCAATACCAAAAGGCCAGCATAAGCAATTA
TGCAAATAATGTTGTGCCTAGGGAACCACGTGGCTATCCTCCAACAGCTGCAGCCACGCCTCCTCCTGCTGCTGCTCCCT
CTGGAAGTTCTTATGGAGAGGCTCATC---GTTATGCATCTGGTCAGTATGAATCCTTTGGGGAGCGGCCAGATTACCCA
GAGTTCCATGGTGGGGGCCAAGGTCGCGATCATGGTTTTGAGCACCGTGGTCATCAATACCCTGGCGGTTGTGCTTATAA
CTCTGGCGGGCGCAGATTCTAA----------------------------------------------------------
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>chr4A_1_TraesCS4A01G096800
GTTAAATAAAAAACAATATTATTAAATTTTAAAAATTGTTACACCAATTTTCAAAACAATGTTCGTCCATTCTAGAAATG
TTCACCGATTCAAAAAAATTGTTAAAAAATGTCCACAGTTTTTAAAAAATATTTGCAGATAGTGTAAAATGTTCATGAAT
TCAGAAACTGTTATTTTTTGGAAATGTTTGAAAATTTGTAAACGTGTTCATAAATTTGAAAAATGTTCATGATTTCAAAT
GTTCATGAGTTTAAAAAAACTGCTCATGATTTCAGAAAATTGAGAGTGGTACTGAGTATCGGTGATGCAGCAAAATGTGA
ACATGGCCATATTTGTTTTGAGACAATGAACATAGCCACTAAAGATTATGATTTTTTTTCTTCTGTTATAACGCACGGGC
CCTTTTGCTAGCGTTATATTACAGGTTCACACTTCACAGGCTACGGCCTAGACATATTGAGGATTGGGCCGCCGCAGCGT
GCGCTTGCCTGGCTCCCGGCTCGGCTCCCAGTCCCTCCCCACCGTCCCCCACCCCA--CCCACTATCTCCCACGCCGCCG
TGAGCGCCACCGCCACCGCCTTCGTGGCTTCCTCTATCGCCGCTGCCGCTGCCGAGGTAAGCCGCAAGGCGGGCTCTTG-
GTTATGCCGGCTTTCTTAGGTCTCCTTTCTCTTTCTTTTTATCCGCCTACCCTAGCAGACGGGGGAAATCAGGCGACCTG
CGGTGCTGCGCCTGCGCGTGTATCTGATCGCTGCGAAATTAGGGTTTCTCGACCTAGCGTGGCTGCTAACATGAATTTCT
TTTCTTCCCGCAAAAAAAAACATGAATTTCTTTTCGGTGGCGCGGGACTGAG---------------------ACT----
-----------------GGACCGTTTGTAATCATGTCCCCGTTCTCAACTGCTAGCAGCGGTCTGTTGCTTCGGTGCTCT
CGAGTGAAAGCTGGGGACAGCGCCGAGATCTGTGGCACCGAGAAGCTTTTTACACTC-GAAATTTGCGCCCTGTGTTGCC
GGTTTGATGGTGTTTGTTCATGACGACAATGTTAATATAGGTTTAAGCCTTATTGTGG---TAGTATTTGCTGATTTTGT
TGGCGTTATAAAGTTGCATACCTATGTGTAAACGTTGTTACGGAATCATAATATGG------------------------
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----TAGTTTGGCATGGTAAAACCTTACCTGATGATGCATTCATTTGGCCTAGATTGATAATTTGGCCGTTCAATCTTAG
AATAATTTTCACAATTTGTTACCAACGTTGTTGCTTTAGTATCTTGCACATTCAGGTTAGAATGAGGCGGCAGGGACAGG
GACAGGGACAGGGACAGGGGCAATACGGGGATCCTAACATCAATTCCATGGTGTCTTCCCAGTTGCATCACTACCAGGCT
CAGCAAAGGGTTCAACAACTACCTGATAATAGTTACCCTGGAAGAGATCCTGGGCAAGCTGCTGGGGAGAACCAGTATAC
CACCCAGAAGGTGAGACAGAGCCAATGGGACAGAGGTGGGCCGAACATCCAGAATCAGATTTCACCATATGCATATAATG
ATGGTATGTAGTA------------------------------------------TGTACCCACACGCCTGTTTCAATTT
-------------------GTTGAAAAATCTAAGATGTCAACTTTTTTGGTGGCATAACTAGTTTATATGTGCACCCTAC
ACTTTGGACAGATTAGCA-TTTTTCCAAGAAATTTTGGACATATTAGTGGTTGTGTAGCTAGCATGGTAAACTGGTAGTA
TGTGTGAGAATGTGCTAGAAAATGTTATGTTTTGCATCTTGGTTACACTTCTGTGCTTTTGCACTGACGGATCCTGATGT
AGGTCAAAGTGCTGAGGGTAAACGATCCTTTTATGATGGACAACAATCTGATCTGAAGGTTGGTCTAGAAAAGCAACCAA
GAAAGGAATTGAGGGACCAGCCTCGTACCGATAAGATTGAAGCAAGGCGCGATGACTATAATCTTCCTCGTACATTTGAA
AGTCTAGAGCAGAGTTTTCGTGAAGACATCGTGGTCCTATCCAAGGAACTAAATGATGCAGAGGATGCTGAAAATACTAG
GCACAGGGAGGTATGTTCAAATA-TATTGCATGATTCTGCCTTGTCCTTCCTACCTGCCAAAAGTAGATTAACTGGACTT
GCAGATCGTTTTTTACCTTCCTGATATCAGTCATTGATATGTCCTACTATTGACAGGAAGTACTTATCCATTTTATGTCA
TTGATATGTCCTATTATTGACAGGAAGTACTTATCCATTTTATGAAAGGATTTAATATCATATGCCTTTTGCTTATTGAG
TTTCTGTTTGGTCCTGTTAGTCAATTGTGGTATGATTAGCCTTTTGAGTAACAATCCCACAGGTAGATGTTGGGAAACAT
CTAGTTTTGTGTTGCTACTTAAAAACTATAGATGTCTTCTCCCCTTGTTCTCAGTTATGTGCATAGACTTGTCAATTTCT
ATGTACATTCTCATTTTGCATGCCAATACCAGTAGTCTAGTACACACCCACATTAATCCATATTAGTCATCGGACGTGAA
CAACCCACATCTTGCAATGTAACTGCAGAGAACATGCAAGCTCGAGCAACCAATATAGGATTTAATACCAAGAAAAACTT
-GTAATACTTAGATATTGAAATGGGGTTCTCCC-CCCTTGCGCATCTATAGCTTA-TCATGTTTCCATTGGTTTACTCTA
TTAGGGCATCTCCAACGCTCTGCCCTTAAACGCCCGCAAACGTCCGG---------------------------------
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----GAAGCCTACTCTGGCCGCTGCGCTGCATTGAAGCGGCGTCGCTCTGCCTGCCCAGCCTATTTAAGTAGTGTTCCAG
CGC------------------------CTCCTCGCCGCAAACCCTCTCCACTCCTCCACA----------GCAGCAGCGA
CGGAGCGGACGACGACGGCTGCCCAGCCGGCTAGGACGGCCATGCGTATGAGGTCACCTTCCGGTACCTCCCGTAGGTTA
GTTTAGGTTTAAAAAAAAATAGTTAAACGGACAAAATATCGTCCGGTTTATGTAAATCATATTCAACTTTTATCCGG---
------------------TTCCATGAAATTTGTCCGTTTGGTTCAATTTTCGTTTAAAATGCGTGCGGACGATTAGGGCA
CATGGTTGGATGTCTGCTTCCGT-------------GTCTGCGGACGGATAGCGAGGCCGATTTGGGGGACGGCG-TTGG
AGATGCCCTTAGTAAGCTTAGATTTATCTTAGTGCTTGGTGTTGATTAAGGAATTGAGTCACTCTGAAGATTTTTGTGCC
TGTGTTAAAATTGCACACCCCACAGCATATGGTGGATCCTTGTATATATGCCTTTCCTATGACAACTTTTAAATCATCTT
TTATATGCCTTTTCTATGGCAACTTTTAAAGATCTAAACAATGGAACTTGTTGCAGTAATGTTGCCTCAACTACAATCAT
ACTTGTCAATGTTGCCCCAATTACAGCATG---------------ACATCATACTGTTGATAATGTTGCAGCACTGTCTC
TGAATCATAGAGTT----TTCTTTTTAAACTAGCATCATACACTATTAATATCTATCAAAGACAACTGCTGTTTTACATG
GTTCTCATGTCTGTGTGCAGAGATTGAACGAAATAAATGCACAGTATCATGAGAAACTATTGGCACTTCGAGCTCGGCAG
ACAGCCTATCGAGAAGAATTCCTGCGCAAAGAGTCTCTGGAACGCCAACAGCAATACCAAAAGGCCAGCATAAGCAATTA
TGCAAATAATGTTGTGCCTAGGGAACCACGTGGCTATCCTCCAACAGCTGCAGCCACGCCTCCTCCTGCTGCTGCTCCCT
CTGGAAGTTCTTATGGAGAGGCTCATC---GTTATGCATCTGGTCAGTATGAATCCTTTGGGGAGCGGCCAGATTACCCA
GAGTTCCATGGTGGGGGCCAAGGTCGCGATCATGGTTTTGAGCACCGTGGTCATCAATACCCTGGCGGTTGTGCTTATAA
CTCTGGCGGGCGCAGATTCTAAAGATGGCTTGGTTGAACAGTCAGCCATTTTGGCCTCACTTCACCTGGTCTTATCTTTC
CGTGGAAAGCTTAAAGTAAATTTCTGTAGAAGCTTAGTTCCAGCCTCCTCTGAATGTAAACACTTGTAAAACCTGTTTTT
CGATTCTGTGCCGCTATTTATTCAAGCGATGATCATTTTCTTCAGTAGCCTGCCTAAAATTCTCCAATTCTCGACTCTTG
CACATGTAGCTGTTTGTGCTTTGCAACCTCACCAGTGTTGCTTTGGATTCGTAATTTTATAGAGGAGAAAGGGAACACTA
TATGGGTGTTGTTTGGCTAGGCTTTGGGTTTCTATTGCTTATATCATATGGCTTATCTGCTGTTAACTCATGTCTTGCAA
TGAAATATTATCATCAAAGCAATGTGAATAC-TCCTTTTTTATATATAAAGGACTCTTTTTATTCACTCATAATGATCTT
TGTTTCTGGTTCTGGTATTCTTTATGGTTTCGAATGACAGAAACTGGAGGTGCGTCTACG--------------------
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--CACTAAGGCGACAAACTAACAA-CTTAATTTGTTTCATTTCTCGTGCAGAGTAAGAGTTTCTCTGACATGGCTCTCAG
CATAAACACGCACTGAGTGAGAATGCTT-CAAGACCAAGACAC--AACTGTTTCCCAACTTGTTTTACAAAGCCGGTGTA
CTGCAAATATATAAAACAGGCGTCAGGCTGACAGCAAAGTAACAACAGTCTAACAGCTAGCTGTACACATGACGATATAT
ATTCTACATTCTCTTGACAGATTCAAAGGCTAGTCTTCCCCTCAAGTCCGGCTTCTCTTCACTGTTTCTACTCCCTGAAG
TGTTGCTTACAAGGAGTAGGCG----ATGCTCCAGAGAGGTAAAGGAGTACACATGGAACCCAGCAACCCTCCCTACTTG
TATGTTTTCTTCACCTCCGGAAGCTTTTCCAGCGCGGTCACGACCTGATCCATGTCCGGCCTGCACCGGGCGTCCATTGA
CAGGCACTGCATC
>chr4A_1
GTTAAATCAAAAAAAATATTAGTGAATTTCAAAAATTGTTACACCAATTTTCAAAACAATGTTCGTCGATTCTAGAAATG
TTCGCCGATTCAAA-AAATTGTTAAAAAATGTCCACAGTTTTTAAAATATATTTGTAGATAGTGTAAAATGTTCATGAAT
TTAGAAAATGTTCTTT-TTGGAAATGTTTGAAAATTTGTAAACATGTTCATAAATTTGAAAAATGTTCATGATTTCAAAT
GTTCACGAGTTTAAAAAATGTC--CATGATTTCAAAAAATTGAGAGTGATAGTGTATCTCAATGATGTAGCAAAATGTGA
ATATGGCCATTTTTTTAG-------ATGAACATGGCCACTAAGGATTATGATTTTTTT--TTCTGTTATAACGCAC-GGC
CCTTTTGCTAGCGTTATATTACAGGTTCACT-------GGCTACGACCTAGACATAT-GAGGATTGGGTCGGCACATCGT
GCGCTTGCCTGGCTCCCGGCTCGGCTCCCAGTCCCTCCCCACCGTCCCCCACCCCA--CCCACCAT-TCCCATGCCGTCG
TGAGCGCCACCGCCACCACCTTTGTGGCCTCCTCTATCGTCGCTGCCGCTGCT-AGGTAAGCTGCAAGGCGGGCTCTTG-
GTTATGCCGGCTTTCTTAGGTCTCCTTTCTCTTTCTTTTTATCCGCCCACCCTAGTAGACAGGGG-AATCAGGCGACTTG
CGGTGTTGCACCTGTGCGTGTATCTGATCGCCATGAAATTAGGGTTTCTTGACCTAGTGTGGCTGCTAAAATG-------
----------------------------TCTTTTCGGTGGTGTGGAACTAAG---------------------ACT----
-----------------GGACCGTTTGTAATCATGTCCCCGTTCTCAACTGCTAGCAGCGGTTTGTTCCTTCGGTG----
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>chr4D_427
TCACAGA-------------------------------------------------------------------------
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--------------------------------TTCACAGGCTACAGCCTAGACATATTGGGGATTGGGCCGCCACAGCGT
GCGCTTGCCTGGCTCCCGGCCCGGCTCCC----------CACCGCTC-----------CCCACCATCTCTCACGCCGCCG
TGAGCGTCACCGCCACCGCCTTCGGGGCCTCCTCTATCGCCGCTGCCGCTGCCAAGGTAAGCCGCAAGGCGGGCTCTTTT
GTTATGCCGGCTTTCTCAGGTCTCCTTTCTCTTTCTTTTTATCCGCCCACCCTAGTAGACGGGGG-AATCAGGCGACCTC
CGGTGCTGCGCCTGCGCGTGTATCTGATCGCCGCGAAATTAGGGTTTCTCGACCTAGCGTGGCTGCTAAATTA-------
------------------------AATTTCTTTTTGGTGGTGCGGGACTGAG---------------------ACTCGGA
TGCTGTCACAGCTCACCGGACCGTTTGCAATCATGTCCCCGTTCTCAACTGCTAGCAGCGGTCTGTTCCTTCGGTGCTCT
CGAGTGAAAGCTGGGAACAGCGCCGAGATCTGTGGCACCGAGAAGCTTATTACACTCGGAAATTTGCGCCCAGTGCTGCC
GGTTTGATGGTGTTTGTTCATGACGATAATGTTAATACAGGTTTAAGCCTTATTGTGGTACTAGTATTTGCTGATTTTGT
TGGTGTGATAAAGTTGCATACCTGTGTGTAAACGTTGTTACGGAATCATGATATGGTAGCTTTGATCTCTTTGAATGTTA
CTCCCTCCGTTCCTAAATATTTGTCTTTCTAGAGATTTCAACAAGTGCTACACACGGAGCAAAATGAGTGAATCTACACT
CTAAAATATGTCTATATACATCCGTATGTGGTAGTCCATTTGAAATCTCTAAAAAGACAAATATTTAGGAACGGAGGGAG
TAGTTAGTTTGGCATGGCAAAACCTTACCTGATGATGCATTCATTTGGCCGAGATTGGTAATTTGGCTGTTCAATCTTAA
AATAATTTTCACAATTTGTTACCAACGTTGTTGCTTTTGTATCTTGCACATTCAGGTTAGAATGAGGCGACAGGGACAGG
GTCAGG------GACAGGGGCAATACGGGGATCCTAACATCAATTCCATGGTCTCTTCCCAGTTGCATCACTACCAGGCT
CAGCAAAGGGTTCAACAACTCCCTGGTAATAGTTACCCTGGAAGAGATCCTGGGCAAGCTGCTGGGGAGAACCAGTATAC
CACCCAGAAGGTGAGACAGAGCCAATGGGACAGAGGTGGACCGAATATCCCGAATCAGATTTCACCATATGCATATAACG
AGGGTATGTAGTATGTACTACCACCAGTTAGTTTCATGTCTGCTGTATGCGTGTGTGTGCCCACACGCCTGTTTCATTTT
GGAATAACT----TCATCTGTTGAAAGGTCCAAGATGTCAACCTTTTTGGTGGCATAACTAGTTTACATATGCACCCTAC
ACTTTGGACAGATTAGCA-TTTTTCTGAGAAACTTTGGACATATTAGTGGTTGTGTAGCTAGCATGGTAAACTGGTAGTA
TGTGTGAGAATGTGCTAGAAAATGTTAT-TTTTGCATCTTGGTTACACTTCTGTGCTTTTGAACTGACCGATCCTGATGT
AGGTCAAAGTGCTGAGGGTAAACGATCCTTTTATGATGGACAACAATCTGATATGAAGGTTGGTCTAGAAAAGCAACCAA
GAAAGGAATCGAGGGACCAGCCTCGTACCGATAAGATTGAAGCAAGGCACGATGACTATAATCTTCCTCGTACATTTGAA
AGTCTAGAGAAGAGTTTTCGTGAAGACATCGTGGTCCTATCCAAGGAACTAAATGATGCAGAGGATGCTGAAAATACTAG
GCACAGGGAGGTATGTTCAAATAGTATTGCATGATTCTGGCTTGTCTTTCCTACCTGCCAAGAGTAGATTAACTGGACTT
GCATATCGTTTTTTACCTTCCTGATATCAGTCATTGATATGTCCTACTATTGACAGGAAGTACTTATCCTG---------
------------------------------TTATCCATTTCATGAGGGGATTTAATATCATATGCCTTTTGCTTATTGAG
TTTCTGTTTGGTCCTGTTAGCCAATCATGGTATGATTAGCCTTTTGAGTAACAATCGCACAGGTAGATGTTGGGAAACAG
A------------------TAGAAACTATAAATGTCTTCTCCCCTTGTTCTCAGTTATGTGCATAGACTTGTCAGTTTGT
ATGTACATTCTCATTTTGCATGCCAATACCAGTA--------CACATCCACATTAATCCATATTAGTCATCTGACATGAA
CAACCCTCATCTTGCAATGTAATTGCAGAGAACATGCAAGCTCCAGAAACCAATATAGGATTTAATAGCAAGAAAAACTT
AGTAAT------------AAATGGGGATCTCCCCCCCTTGCGCATCTATAGCTTATTCATGTTTCCATTGGTTCACTCTA
TTAGGGCATCTCCAATGCTGTGCCCTTATATGCCCGCAAACGTCCGGACCGATGCATCCGGACGTTTTTTGCCATCCAAC
GTTGTGCCGCAAACGTACCTGGACGAGTCCGCACACCCGAATTCCCGCAAACCGGCACCACACCTGGGGGAGGGTTGAGG
GCGTCCGGACTCGTGCCACGCACGCGCCGGACAAGCGGT-CCACCAAACCGTCTCCCGCGCGAACCGCTCTTGAAACTTC
GCCCGCGCATTGATCCTGGTCAGCCGCTCCAGAGCGGACGCAACTCGACGACATTGATGCCAGTCAGCCGCTACAGAGCA
GACGCGACTCGATGGCCT-GATTCTGGTCAGAGTGACGTGAGCAGACGGGAGAGTGGCGCTGGTTCAATGCGGACGCGGT
CTGAGAAGTCTAGTCCGGCCACTGCATGGCATTGAAGCAGCGTCACTCCGCCTGCCCGGCCTATTTAAGCAGTGTTTCGG
CGCCCTCGTCACCGCAAACCCTCTCTGCTCCTCTCTGCAAACCCTCTCCACTCCTCTCTGCTTCTCCATGGCAGCGGCGA
TGGAGCGGATGGTGACGGCGGCCCAGCCGGTTAGGGAGGCCATGCGTAAGAGGTCACTGTCCGGTACCTCATGTAGTTTA
GTTTAGGTTTTTAAAATTTTAGTTGAACAGACGAAATATCGTCCGGTTTATGTAAATTATATCCAACTTTTATCCGGTTT
GGAAGAAGTTCGTTCGGTTTCCATGAAATTCGTCCGTTTGATTCAAGTT----ATTAAATGTGTGC-GACGTTTAGGGCA
CACGGTTGGATGGCCGCCTCCCGTATCCATGTCTCCGTCTGCGGACGGATAGTGCGGCTGATTTTGGCGACGGCATT-GG
AGATGCCCTCAGTGTGCCTAGATTTATCTTAGTGCTTGGTATTGTTTAAGAAATTGAATCACTC-GAAGATTTTTGTACC
TTTGTTAAAATTGCACGCCCG-CAACTTATGGTGGATCCTCT--CATATGCCTTTCCTATGGCAACTTTTAAATCATCTT
TTATATGCCTTCCCTATGGCAACTTTTAAACATCTAAACAATGGAACTTGTTGCAGTAATCTTGCCTCAACTACAATCAT
ACTTGTCAATCTTGCCCCAATTACAGCATGCCGAAGTTAGATTGGACATCATGTTGTGGATAATGCTGCAGCACTCTGTC
GCTGGTGCATAGAGTTGATTTTTTTAGAACTAGCAGCATGCACTGTTATTAATATC---AGACAACTGCTGTTTTACATG
TTTCTCATGTCTGTGTGCAGAGATTGAACGAAATAAATGCACAGTACCATGAGAAACTATTGGCACTTCGAGCTCGCCAG
ACGGCCTATCGAGAAGAATTCCTGCGCAAAGAGTCTCTGGAACGCCAGCAGCAATACCAAAAGGCCACCATAAGCAATTA
TGCAAATAATGTGGTGCCTAGGGAACCACGTGGCTATCCTCCAACAGCTGTAGCCACGC---CTCCTGCTGCTGCTCCCT
CTGGAGGTTCTTATGGAGAGGCTCATCGGGGTTATGCATCTGGTCAGTATGAAACCTTTGGGGAGCGGCCAGATTACCCA
GAGTTCCATGGTGGGGGCCAAGGCCGTGATCATGGTTTTGAGCATCGTGGTCATCAATACCCTGGCGGTCGTGCTTATAA
CTCTGGCGGGCGCAGATTCTAAAGATGGCTTGATTGAACAGTCAGCCATTTTGGCCTCACTTCACCTGGTCTTATC-TTC
CGTGGAAAGCTTACAGTAAATTTCTTTAGAAGCTTAGTTCCAGCCTCCTCTGAATGTAAACACTTGTAAAACCTGTTTTT
CGATTTTGTGCCGCTATTTATTCAAGCATTGATCATTTTCTTCAGTAGCCCGCCTAAAATTCTCCAATTCTCAACTCTTG
CGCATGTAGCTATTTGTGCTTTGCAACCTCACCAGTGTTGCTTTGGATTCGTAATGTAGAGGAAAAC----GGAACACTA
TGTGGGTGTTGTTTGGCTAGGCTTTGGGTTTCTA-TGCTTATATCATATGGCTTATCTGCTGTTAACTCAAGTCTTGCAA
TGAAATATTATCATCGTAGCAATGTGAACACTTCATT--TTTTTTATAAAGGACGCTTTTTATTGAATTGTAATGATCTT
TGTTTCTGGTTCTGGCATTCTTTATGGTTTCGAATGACAGAAACTGGAGGTGCGTCTACG--------------------
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--CACTAAGGCGACAAACTAACAAACTTAATTCGTTTCATTTCTCGTGCAGAGTGAGAGTCTCTCTGACATGGCTCTCAG
CATTAGCACGCACCGAGCGAGAATGCTTCCAAGACCAAGACACAAAACTGTTTCCCAACTTGTTTTACAAAGCCGATGTA
CTGCAAATATATAAAACAGGCGTCAGGCTGACAGCAAAGTAACAGG---CTAACAGCTAGCTGTACACATGGCGACATAT
ATTCTACATTCTCTTGACAGATTCAAAGGCTAGTCTTCCCCTCAAGTCCGGCATCTGTTCACTGTTTCTACTCCCTGAAG
TGTTGCTTACAAGGAGTGGATGATGCATGCTCCAGAGAGGTAAAGGAGTACACATGGAACCAGCAACCCTCCCCTACTTG
TATGTTTTCTTCACCTCTGGGAGCTTTTCCAGCGCGGTCACGACCTGATCCATGTCCGGCCTGCACCGGGCGTCCATTGA
CAGGCATTGCATC
>chr4B_456
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-------------------------------------------------------ATTGGGGATTGGGCCGCCACAGCGT
GCGCTTGCCTGGCTCCCGGCCCGGCTCCC----------CACCGCCCCCCACCCCACACCCACCATCTCTCACGCCGCCG
TGAGCGTCACCGCCACCGCCTTCGGGGCCTCCTCTATCGCCGCTGCCGCTGCCAAGGTAAGCCGCAAGGCGGGCTCTTTT
GTTATGCCGGCTTTCTTAGGTCTCCTTTCTCTTTCTTTTTATCCGCCCACCCTAGTAGACGGGGG-AATCAGGCGACCTC
CGGTGCTGCGCCTGCGCGTGTATCTGATCGCCGCGAAATTAGGGTTTCTCGACCTAGCGTGGCTGCTAAATTA-------
------------------------AATTTCTTTTTGGTGGTGCGGGACTGAGACTCGGATGCTGTCGCAGCTCACT----
-----------------GGACCGTTCGTAATCATGTCCCCGTTCTCAACTGCTAGCAGCGGTCTGTTCCTTCGGTGCTCT
CGAGTGAAAGCTGGGAACAGCGCCGAGATCTGTGGCACCGAGAAGCTTATTACACTCGGAAATTTGCGCCCTGTGTTGCC
GGTTTGATGGTGTTTGTTCATGACGATAATGTTAATATAGGTTTAAGCCTTATTGTGGTACTAGTATTTGCTGATTTTGT
TTGTGTGATAAAGTTGCATGCCTGTGTGTAAACTTTGTTACGGAATCATGATATGGTAGCTTTGATCTCTTTGAATGT--
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TAGTTAGTTTGGCATGGCAAAACCTTACCTGATGATGCATTCATTTGGCCTAGATTGGTAATTTGGCTGTTCAATCTTAA
AATAATTTTCACAATTTGTTACCAACGTTGTTGCTTTTGTATCTTGCACATTCAGGTTAGAATGAGGCGACAGGGACAG-
-----G------GACAGGGGCAATACGGGGATCCTAACATCAATTCCATGGCCTCTTCCCAGTTGCATCACTACCAGGCT
CAGCAAAGGGTTCAACAACTCCCTGATAATAGTTACCCTGGAAGAGATCCTGGGCAAGCTGCTGGGGAGAACCAGTATAC
CACCCAGAAGGTGAGACAGAGCCAATGGGACAGAGGTGGACCGAATATCCCGAATCAGATTTCACCATATGCATATAACG
AGGGTATGTAGTATGTACTACCACTAGTTAGTTTCATGTCTGCTGTATGCGTGTGTGTGCCCACGCACCTGTTTCATTTT
GGAATAACTTGCTTCATCTGTTGAAAAGTCCAAGATGTCAACCTTTTTGGTGGTATAACTAGTTTACATATGCTCCCTAC
ACTTTGGACAGATTAGCATTTTTTCCGAGAAACTTTGGACATATTAGTGGTTGTGTAGCTAGCATGGTAAACTGGTAGTA
TGTGTGAGAATATGCTAGAAAATGTTATGTTTTGCATCTTGGTTACACTTCTGTGCTTCTGAACTGACCGATCCTGATTT
AGGTCAAAGTGCTGAGGGTAAACGATCCTTCTATGATGGACAACAATCTGATATGAAGGTTGGTCTAGAAAAGCAACCAA
GAAAGGAATCGAGGGACCAGCCTCGTACCGATAAGATTGAAGCAAGGCACGATGAGTATAATCTTCCTCGTACATTTGAA
AGTCTAGAGCAGAGTTTTCGTGAAGACATCGTGGTCCTATCCAAGGAACTAAATGATGCAGAGGATGCTGAAAATACTAG
GCACAGGGAGGTATGTTCAAATAGTATTGCATGATTCTGGCTTGTCTTTCCTACAT-------GTAGATTAACTGGACTT
GCATATCGTTTTTTACCTTCCTGATATCAGTCATTGATATGTCCTACTATTGACAGGAAGTAC-----------------
------------------------------TTATCCATTTCATGAGAGGATTTAATATCATATGCCTTTTGCTTATTGAG
TTTCTGTTTGGTCCTGTTAGCCAATCATGGTATGATTAGCCTTTTGAGTAACAATCGCACAGGTAGATGTTGGGAAACAG
A------------------TAGAAACTATAGATGTCTTCTCCCCTTGTTCTCAGTTATGTGCATAGACTTGTCAGTTTGT
ATGTACATTCTCATTTTGCATGCCAATACCAGTA--------CACATCCACATTAATCCATATTAGTCATCTGACATGGA
CAACCCTCATCTTGCAATGTAATTGCAGAGAACATGCAAGCTCTAGAAACCAATATAAGATTTAATACCAAGAAAAACTT
AGTAATAATTAGATATTGAAATGGGGATCTCCC-CCCTTGCGCATCTATAGCTTATTCATGTTTCCATTGGTTTACTCTA
TTAGGGCATCTCCAATGCTGTGCCCTTATATGCCCGCAAACGTCCGGACCAATGCATCCGGACGTTTTTTGCCATCCAAC
GTTGTGCCGCAAACGTACCTGGGCGAGTCCGCACGCCCGAATTCCCGCAAACCGGCACCAAACCTGGGGGAGGGTTACGG
GCGTCCGGACTCGTGCCACGCACGCGTCGGACAAGCGGTCCCACCAAACCGTCTCCCGCGCGA-------TTGAAACTTC
GCCCGCGCATTGATGTTGGTCAGCCGCTCCAGAGCGGATGCAACTCGACGACATTGATGCCAGTCAGC---TACAGAGCA
GAGGTGACTCGATGGCCTTGATTCTGGTCAGAGTGACGTGACCAGACGGGAGAGTGGCGCTGGTTCAATGCGGACGTGGC
CTGAGAAGCCTAGTCCGGCCACTGGACGACATTGAAGCGGTGTCACTCCGCCTGCCCGGCCTATTTAAGCAGTGTTTCGG
TGCCCTCGTCACCGCAAACCCTCTCCGCTCCTCTCTGCAAACCCTCTCCACTCCTCTCCGCTTCTCCATGGCAGCGGCGA
TGGAGCGGATGGTGACGGCGGCCTAGCCGGTTAGGGCGGCCATGCGTACGAGGTCACCGTCCGGTACCTCATGTAGTTTA
GTTTAGGTTTTTAAAATTTTAGTTGTACAGACAAAATATCGTCCGGTTTATGTAAATTATATCCAACTTTTATCCGGTTT
GGAAGAAGTTCGTTCGGTTTCCATGAAATTCGTCCGTTTGATTCAAGTTTGTTATTAAATGCGTGTGGACGTTTAGGGCA
CACGGTTGGATGGCCGCCTCCCGTATGCGTGTCTCCATCTGCGGACGGATAGTGCGGCTGATTTGGGCGACGGCG-T-GG
AGATGCCCATAGTGTGCCTAGATTTATCATAGTGCACGC-----------------------------------------
-----------------CCCG-CAACTTATGGTGGATCCTCT--TATATGCCTTTCCTATGGCAACTTTTAAATCATCTT
TTATATGCCTTCCCTATGGCAACTTTTAAACATCTAAACAATGGAACTTGTTGCAGTAATCTTGCCTCAACTACAATCAT
ACTTGTCAATCTTGCCCCAATTACAGCATGCCAAAGTTAGATTGGACATCATGTTGTGGATAATGCTGCAGCACTCTGTC
GCTGGTGCATAGAGTTGATTTCATTAGAACTAGCAGCATACACTGTTATTAATATC---AGACAACCGCCGTTTTACATG
TTTCTCATGTCTGTGTGCAGAGATTGAACGAAATAAATGCACAGTACCATGAGAAACTATTGGCACTTCGAGCTCGCCAG
ACGGCTTATCGAGAAGAATTCCTGCGCAAAGAGTCTCTGGAACGCCAGCAGCAATACCAAAAGGCCACCATAAGCAATTA
TGCAAATAATGTGGTGCCTAGGGAACCACGTGGCTATCCTCCAACAGCTGCAGCCACGC---CTCCTGCTGCTGCTCCCT
CTGGAGGTTCTTATGGAGAGGCTCATCGGGGTTATGCATCTGGTCAGTATGAAACCTTTGGGGAGCGGCCAGATTACCCA
GAGTTCCATGGTGGGGGCCAAGGCCGCGATCATGGTTTTGAGCACCGTGGTCATCAATACCCTGGCGGTCGTGCTTATAA
CTCTGGCGGGCGCAGATTCTAAAGATGGCTTGATTGAACAGTCAGCCATTTTGGCCTCACTTCACCTGGTCTTATCC-TC
CGTGGAAAGCTTACAGTAAATTTCTTTAGAAGCTTAGTTCCAGCCTCCTTTGAATGTAAACACCTGTAAAACCTGTTTTG
CGATTATGTA---CTATTTTCTCCAGGGCTGATCATTTTCTTCAGTAGATCGCCTAAAATTCTCCAATTCTCAACTCTTG
CGCATGTAGCTGTTTGTGCTTTGCAACCTCACCAGTGT----------------------AGAGGAAAAAGGGAGCACTG
TGTGGGTGTTGTTTGGCTAGGCTTTGGGTTTCTA-TGCTTATATCATATGGCTTATCTGCTGTCAACTCATGTCTTGCAA
TGAAATATTATCGTCAAAGCAATGTGAACAT-TCCTT--TTTTTTATAAAGGACGCCTTTTATTCACACATACTGATCTT
TGTTTCTGGTTCTGGTATTTTTTATGGTTTCGAATGATAGAAACTGGGGGTGCATCTACTCCCTCCGTCCGCGAATAAGT
GTACTTCTACCATTTTTACTAAGTCAAAATTTTATAATTTTGACCAACTTGTTAGAAAAGAGTAGTAGGTTTATATGACA
TCAAATTGGTATATTATGAAAATACATTTCAAAAAGAATCTAGTGATACTAATTTTGTGTCATAAATGGTGCTACTTTTA
CCTATAAAGTTGGTCAAAGTTTCAAAACTTTGAGTTAGAACAAAAGCTAGATGTACACTTATTCGCGGACGGAGGGAGTA
CACACTAAGGCGACAAACTAACAA-CTTAATTTCTTCCATTTCTCGTGCAGAGTAAGAGTTTCTCTGACATGGCTCTCGG
CATTAGCAAGCACTGACTGAGAATGCTT-CAAGACCAAGACACAAAACTGTTTCCCAACTTGTTTTACAAAGCCGATGTA
CTGCAAATATATAAAACAGGCGTCAGGCTGACAGCAAAGTAACAGG---CTACCAGCTAGCTGTACACATGGCGATATAT
ATTCTACATTCTCTTGACAGATTCAAAGGCTAGTCTTCGCCTCAAGTCCGGCAGCTCTTCACTGTCTCTACTCCCTGAAG
TGTTGCTTACAAGGAGTAGGTG----ATGCTCCAGAGAGGTTAAGGAGGACACATGGAACCAGCAACCCTCCCCTACTTG
TATGTTTTCTTCACCGCCGGAAGCTTTTCCAGCGCGGTCACGACCTGATCCATGTCCGGCCTGCACCGGACGTCCATCGA
CAGGCATTGCATC
>SNPs
-------S-----S-------S-S-----S-------------------------------------S------------
---S----------S--------------------------------S-------S------------------------
-S-----S----S---S--------------------------S------------------------------------
-----S------------SS-SSS----------S-------------S--S--SS-S--SS-----S------------
-S--------S---S-SSSSSSSSS--------S--------S---------------SS----------------S---
------------------------------SS-----------------------------------------S------
---------------------------------------------------------------S----------------
----------------------------S------------------------S--------------------------
-----------------------------------------------S-------S---------S--------------
-------------------------------S-------------------------------------S---SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS----------------S---------------------------------------
-------------------------------------------------------------------S------------
---------------S--------------------------------S-------------------------------
--------------------------S-----------------------------------------------------
---S--S----------------S-------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S---------------------------------------S---------S-----------S
-------------------------------------S-------------------------------S----------
-S----SSSSSS----------------------------------------S---------------------------
--------------------S-----------------------------------------------------------
---------------------------------------S-----S----S---------------------------S-
-S--------------------------------------------------------S-----------------S---
---------------------------S--S-----------S-----------------------S--S----------
--------------------------S-----S-----------------------------------------------
-------------------------------------------------------------S------S-----------
----------------------------------------------------S---------------------------
---------S--------------------------------------S-------------------------------
--------------------------------------------------------------------------------
---------------------------------------S------S--------------S------------------
---S-----------------------------------------------------------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S----S----------------------------------
--------------------S----SS-----------------------------S----------------------S
SSSSSSSSSSSSSSSSSSS--S----------------------------------------------------S---S-
----------------------------------SSSSSSSS----S------------------------S---S----
------S---------------S--------------------S--S---------------------------------
-------S------------------S-----------------------------------------------------
---------------S---S--------S-S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S--S----S----S-S----------------S---S--------S-----------S------S-S-
---------------------------------S-S--------------------SS-S---------------S----
S--------S-SS------S----------S----S------------S---------S-----------SS----S---
----------SS----SSS-----S---S----------------------------S----S-----------------
------------------------------S---------S-----S---SS-S-S---------------S--------
--S---------S-S--S---SS-----------------------------S-S---S--------S---------S--
-------------SS--S----------------------S---S-----S------S------S------------S--
-S--------------S---SS--S-S-------------SSSS-----------------S------------------
-----------SS-----------------S-----------------------------S-------------------
----------S-----------------------------------------SS---S-------S---------S-S--
SSSSSSSS-S--SS------S----SS--------S--------S---S--SSSSSSSS---------------------
S---------------------------------------------S-----------------------------S---
--S--------------------------------------------S-------------------S------------
------------S----------------------------------------------SSS------------------
-----S-----------------------------------------------S--------------------------
-----------------------S---------------------------------------------S----------
--------------------------------S-------------------------------------------S---
-------------S-----------S------------------------------------------------------
-----S----------------------S---------------------S---------------------S-------
-S-----------------------------------------------------S-SSS------S-------------
-S--------------------------------S---------------------------------------------
----------------------------S--------SS--S-S----------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S-S---------------------------------------------------------------------S----
--------------------------------------------SSSSS----------------------S--------
----------------------------------------------------S---------------------------
--------------------S----------------------------------------SSSS-S--SS---------
--------------------------------------------------------------------------------
------S------
>forward_976
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----------------------------------------------------------------------------CTCT
CGAGTGAAAGCTGGGG----------------------------------------------------------------
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>reverse_2360
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---------------------------------------CCTTGTCCTTCCTACCTGCC---------------------
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>forward_1837
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---------------------------------------------------------TACCCACACGCCTGTTTCAA---
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>reverse_3763
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--TGGTTGGATGTCTGCTTCCG----------------------------------------------------------
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>forward_2989
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---------CTCCAACGCTCTGCCCTTAA---------------------------------------------------
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>reverse_4584
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-----------------------TCGCGATCATGGTTTTGAGC-------------------------------------
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>forward_4317
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---------------------------------------------------------TATTGGCACTTCGAGCTCGG---
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>reverse_5822
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-------------------------------------------------------------CAGCAACCCTCCCTACTTG
T-------------------------------------------------------------------------------
-------------
