>input_sequence_26132
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-------------------------------------------------------------------GTAGCAAAAGCAA
TTGGTAGCAGAAGA-AAGACGCCACGCAAAGCCCAGTCCGGCGTCGCCTCCTCCTCCTCCGGCGATAGGGTTTCTCCCGA
TGGAGCAGCCCTCCACCTCCTCGCCGGCGGCGCCGCCCCCGC------GGCGGCCGCCGACGAAGGTCCGGCTGCGGCGC
CAGAGGCTCGAGGCGCTCCTGCAGGAGCTCCGCCGCACGCTCGACGGGCTGGGCGACGCCGATCTCGGCGCCTCGCTCTC
CGACGTGGACGCCGGCTCCGAGGCGCCCGGGTACGGGGACAGCGAGGGCGGCGAC---GACGACGGTGACGGTGACTCGG
CGGCTTCGATGGCGAGCGATTCCGACCGCGCCACGGACCAGGTACGGAC-----GCGGCGAGGTTTGGGACTTCCGAGCC
TGAAAAA-TTCAGACCATGAGGCATTAATGAATTGCATTAACTGGCGTGTAACTGTTGAGCAATTGCGGTAATTCGACCA
AGTTCTCGTTATTTCAGGTTAGTCGAACGAACTTGGTCGGTTATTGGCCATCTGGATCTGAATTGGGGGTACCTTTGTTT
CCGTAACTAGTTA-------------------------------------------------------------------
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------------AAAAGTGCTTCCATA---------CTCATATTTGTATGTGGTTCCTCTGCCTGGTGAGTGCTGACTGC
GGACTAGTTGTGAACATCTGGAGTCAGATA-GTCTACCATGAGAAGATGCCCTTTTATTAGAAGCAGGATCAGATGCAGT
GAGGTTATCCAAAGTAAAGATGTTGACATCTGTGATGGTGGAACAGTGGAATGTGATGGTTTAGGCTAAACATCTTCTTA
GTATTCATAAACTAGGAATGCAACTGCCGTTAACAGGGGGTGAGGAACAAGGATCAGTATAGCACGTGCAATCATTTTTC
TATTTTGCATGTTATTATGCCCACTTTTCCCATTTAGAATGTGTGCCGAACAATCTCATTTCACTTTGATTTTATTTTCT
CGAGTGATATGAGGGAGAGCATGGAGAGTTTTTATTATAGTTCATGTTGCTATGAAGCTGTTAGCTGTCCCAACGCTCTG
AAGTCTGAACGGCTTGCTTTCACCTTGCAGGTGTTTGATCTCCTTAAATCTAGGTTTGAATCACCAGAATTTCTTCAGGA
GTTCCATGAAATTCAAAAGTCTGTATTTCAAAACGGGGCAGGTATGCCT-CTACTGAATGCACTT------------GTT
ATTACTGCTGGTAGTGCCTGCAATGTATCTAAGTATGGACACCTAAA-TAACTCATGCAGTGGAATGTTGTGTTTCGCAT
ATCTTTTTATTTTACCTTTCTCGAAATAGAGTTGTGATACTCTAAA-TTCATTCGATGTTCTTTGCTACAGTTGAATTGG
ATAAATCATGGGATGTGATAAAGGCGGGAGATGTGTGGGAAGATGATGACGACAATGGATATGTTCTTGTTAAGCCAGAG
GATGCAGCTGAAGGGATAGCTTTCTTTGTAGCCACATACTTATCGACACTTACAAAAACCAAGGTAGGAATGCCCTGCTA
TTTTCACTTCAATGTGATTCTATCATCACCTCAAAACCTTTGTTCCTGTTCCCTTATTATGTGGTTTGATGCAATAAACA
ATCATTGATTTAACGTCTGTCCACATGATAATCGATATATTTGAGAAAAATTGGTTCATTTCCATGTCATACATATCTCT
TCATAAGAGATGCCCCAGTCACCATGTTCCGGACTTGATATACTTGTGCTGCTCTTCTCTATAATATCTCGTGTCGTT--
--TTTTTTACCGAGTCGTTTCTCTTCATGTATGTGAGTTGATCTA-ACATCTGATCCATGAATATCTCATGTTCTACAGG
AATTATCTCCTGATCGACTTCAAAAAGGTTTGCTCTCTCTTTTCTTTGTTCATCAGAATGATTACTCGAATCATTTCAA-
TGTAAGATCTCATGCTGAACTTCATCACCGCTCTTCTGCCAGCCCTTAAGAAGACATTTTCAGCCGAGAAGAGAAAAGGC
AAACTTCGGAAGGCATGGGATGGGACAAAAGTCATTTATAACGTAGCTTCATGGGGTGCCACAGCTGTTGGGTAAGTTAT
TTCGCTAACCTTGGACATGAACTTTCGAGAAATGTTTACCCAACCTGCATGGCTTGTTACTAAGCTTGAGTTCCCCCCGA
GGGAAATACTGCAAATTAGTTTTCTGACCAATCCTCAGCGGCTAATTTCATTTCACAAAGCACACGAGCTGGTGATGAGC
ATAGTCAAATGTACTGCCAGCTATGTCTTCAGAGTTTGTCTCGGTCATCCATTTGGTAATCTCATCCAACCTAGTGGGTT
ACATATTGCTGCAAGCTTCAAAATGCTCCTGA--AGAGGTTATGCTCTATTAGTCTTCACTAGTACTAC-TACTAATTAA
CCCTGGGAGCAGATATGTGATATGTGTTAGCCCCATGATTGATCACTTCCAAGATCTGATGGAGTCAACTAAT-------
-----------------------CATAATTTGGGGCATCGATCGGGGATTGGGACCTGTTCGGACAAGGGGCAGTCACAC
CCTTAAAAATTGCATCTACAGTAGATAA----------------------------------------------------
--------------------------------------TAAATTACTAACAG-CCTTATTTCATTTGTAAGTACTGCATG
TATACATAATACATATCCTGTGTAATCTGATTGCAGTGCACATTTTTCATGGTAACAGCATCTACAATAACCAAGCAATT
CTAAAGGCAGCAGGCACAGCCATTCAGATGTCCTGGCGTGTGGTGTCCAAGTTCCTGTGAGTGATGGGTGGTGGTGATTG
TTGTTACTGGCGTGCTACATTTATTTAGGTA--AAGGAGTACCACATTGGTTGGAAAAATGTCTGAGTAGTTGATATACT
GCCGATTGAAGAATTGAGGTCTAGAGTTTAGGTCTATTTGGATGCTTGAAGGATTGAGGCTTAGCGTTTATGTTTGTTGA
TTGAAGGCTCGGAAGCCCATTTAAATAAATTATGTTGTTGCTC-------------------------------------
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>chr5D_1_TraesCS5D01G253800
ACATACCAGAGCTGGCCTGACCTTGTCGATGGCAGCCGAGAAGTCTTCGTGCAAGTGCCCCTAAGGACCAGCGTCTAGGT
GCGACAGTCGTCGCCATTGAATCCTTTAATCGATTCGAAGAATATGACACCAAATATCGCCGTTGCGTACGCACAACAAG
AAATCCTAAGCTCGCCGCCCTGAGGAGCTGGCAGGAATCTACGCCGAAACTCTGTCTAATCCGTCCCAGCGGACGAACTT
GAGGAGGATCGGATCCCGGGAGACTGTCTTAAAGAAGAAGCGCGGCCATCCGTCCAAACGTCGCCCCTGCGGAACT--AA
AACCTACCTATTTACTAGCCGAAAATGGGGCACCAGAAATCCCCTCCCCGCCACTGGCTGCCGGAGCGGCAGGCAGAGGA
GAGGCGAATTCACGGGCTCGCCGGCGGAGATCGAGGGAAGGAAGGCTTTCCCTAGTCGCCTTGCGGGAGGGGAAAGAAAA
TCAATCTAAACCCATGTCGTTACGCACACCCTACTCATATGAGCACCTCCGAGAGACCGAGCCGGCACGTCATCTTGAGA
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------------------------TTGACGATGTCTTTGTAGTCCACAGGAATGTATCCTCCCACTGAACGCACATCGTC
GGAAGCCTGTTATAAATCCAGGAAAATTTAAGCACCAATGTCAAGTATGAGATTTAGCTCTCATAGGTAGGGAATATCAC
TGTTCAACCGTCCAACAACGATTCCCTCGGTATTGAAGTTAAGGGGTGAACGAAGTGATACGTTAAAGATGGAAAAGTGG
ACTTTTCTCTACAGATGTAGAGTTTGTCTCGACTCTCGAAATTGACATGTGGGATCAAAGCCCTTGTATCTTGCAATTTG
CAAGCAACATGAACGGCGAGCGTCCGCAAACGCAAACACGTGTGTAGGGAGGAAGCACCATCGGAGACGAAACCAAAGCA
GCAAAAACACCTTCTCCGGTTAATAATCCAATCATCGCACGGAAA-CACCACGTCTCGTCTCTCCATGTAGCAAAAGCAA
TTGGTAGCAGAAGA-AAGACGCCACGCAAAGCCCAGTCCGGCGTCGCCTCCTCCTCCTCCGGCGATAGGGTTTCTCCCGA
TGGAGCAGCCCTCCACCTCCTCGCCGGCGGCGCCGCCCCCGC------GGCGGCCGCCGACGAAGGTCCGGCTGCGGCGC
CAGAGGCTCGAGGCGCTCCTGCAGGAGCTCCGCCGCACGCTCGACGGGCTGGGCGACGCCGATCTCGGCGCCTCGCTCTC
CGACGTGGACGCCGGCTCCGAGGCGCCCGGGTACGGGGACAGCGAGGGCGGCGAC---GACGACGGTGACGGTGACTCGG
CGGCTTCGATGGCGAGCGATTCCGACCGCGCCACGGACCAGGTACGGAC-----GCGGCGAGGTTTGGGACTTCCGAGCC
TGAAAAA-TTCAGACCATGAGGCATTAATGAATTGCATTAACTGGCGTGTAACTGTTGAGCAATTGCGGTAATTCGACCA
AGTTCTCGTTATTTCAGGTTAGTCGAACGAACTTGGTCGGTTATTGGCCATCTGGATCTGAATTGGGGGTACCTTTGTTT
CCGTAACTAGTTA-------------------------------------------------------------------
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------------AAAAGTGCTTCCATA---------CTCATATTTGTATGTGGTTCCTCTGCCTGGTGAGTGCTGACTGC
GGACTAGTTGTGAACATCTGGAGTCAGATA-GTCTACCATGAGAAGATGCCCTTTTATTAGAAGCAGGATCAGATGCAGT
GAGGTTATCCAAAGTAAAGATGTTGACATCTGTGATGGTGGAACAGTGGAATGTGATGGTTTAGGCTAAACATCTTCTTA
GTATTCATAAACTAGGAATGCAACTGCCGTTAACAGGGGGTGAGGAACAAGGATCAGTATAGCACGTGCAATCATTTTTC
TATTTTGCATGTTATTATGCCCACTTTTCCCATTTAGAATGTGTGCCGAACAATCTCATTTCACTTTGATTTTATTTTCT
CGAGTGATATGAGGGAGAGCATGGAGAGTTTTTATTATAGTTCATGTTGCTATGAAGCTGTTAGCTGTCCCAACGCTCTG
AAGTCTGAACGGCTTGCTTTCACCTTGCAGGTGTTTGATCTCCTTAAATCTAGGTTTGAATCACCAGAATTTCTTCAGGA
GTTCCATGAAATTCAAAAGTCTGTATTTCAAAACGGGGCAGGTATGCCT-CTACTGAATGCACTT------------GTT
ATTACTGCTGGTAGTGCCTGCAATGTATCTAAGTATGGACACCTAAA-TAACTCATGCAGTGGAATGTTGTGTTTCGCAT
ATCTTTTTATTTTACCTTTCTCGAAATAGAGTTGTGATACTCTAAA-TTCATTCGATGTTCTTTGCTACAGTTGAATTGG
ATAAATCATGGGATGTGATAAAGGCGGGAGATGTGTGGGAAGATGATGACGACAATGGATATGTTCTTGTTAAGCCAGAG
GATGCAGCTGAAGGGATAGCTTTCTTTGTAGCCACATACTTATCGACACTTACAAAAACCAAGGTAGGAATGCCCTGCTA
TTTTCACTTCAATGTGATTCTATCATCACCTCAAAACCTTTGTTCCTGTTCCCTTATTATGTGGTTTGATGCAATAAACA
ATCATTGATTTAACGTCTGTCCACATGATAATCGATATATTTGAGAAAAATTGGTTCATTTCCATGTCATACATATCTCT
TCATAAGAGATGCCCCAGTCACCATGTTCCGGACTTGATATACTTGTGCTGCTCTTCTCTATAATATCTCGTGTCGTT--
--TTTTTTACCGAGTCGTTTCTCTTCATGTATGTGAGTTGATCTA-ACATCTGATCCATGAATATCTCATGTTCTACAGG
AATTATCTCCTGATCGACTTCAAAAAGGTTTGCTCTCTCTTTTCTTTGTTCATCAGAATGATTACTCGAATCATTTCAA-
TGTAAGATCTCATGCTGAACTTCATCACCGCTCTTCTGCCAGCCCTTAAGAAGACATTTTCAGCCGAGAAGAGAAAAGGC
AAACTTCGGAAGGCATGGGATGGGACAAAAGTCATTTATAACGTAGCTTCATGGGGTGCCACAGCTGTTGGGTAAGTTAT
TTCGCTAACCTTGGACATGAACTTTCGAGAAATGTTTACCCAACCTGCATGGCTTGTTACTAAGCTTGAGTTCCCCCCGA
GGGAAATACTGCAAATTAGTTTTCTGACCAATCCTCAGCGGCTAATTTCATTTCACAAAGCACACGAGCTGGTGATGAGC
ATAGTCAAATGTACTGCCAGCTATGTCTTCAGAGTTTGTCTCGGTCATCCATTTGGTAATCTCATCCAACCTAGTGGGTT
ACATATTGCTGCAAGCTTCAAAATGCTCCTGA--AGAGGTTATGCTCTATTAGTCTTCACTAGTACTAC-TACTAATTAA
CCCTGGGAGCAGATATGTGATATGTGTTAGCCCCATGATTGATCACTTCCAAGATCTGATGGAGTCAACTAAT-------
-----------------------CATAATTTGGGGCATCGATCGGGGATTGGGACCTGTTCGGACAAGGGGCAGTCACAC
CCTTAAAAATTGCATCTACAGTAGATAA----------------------------------------------------
--------------------------------------TAAATTACTAACAG-CCTTATTTCATTTGTAAGTACTGCATG
TATACATAATACATATCCTGTGTAATCTGATTGCAGTGCACATTTTTCATGGTAACAGCATCTACAATAACCAAGCAATT
CTAAAGGCAGCAGGCACAGCCATTCAGATGTCCTGGCGTGTGGTGTCCAAGTTCCTGTGAGTGATGGGTGGTGGTGATTG
TTGTTACTGGCGTGCTACATTTATTTAGGTA--AAGGAGTACCACATTGGTTGGAAAAATGTCTGAGTAGTTGATATACT
GCCGATTGAAGAATTGAGGTCTAGAGTTTAGGTCTATTTGGATGCTTGAAGGATTGAGGCTTAGCGTTTATGTTTGTTGA
TTGAAGGCTCGGAAGCCCATTTAAATAAATTATGTTGTTGCTCGAATGTAAATAGGCCATTGATTTGGCCGCGTGAAGCA
ACTGAAGCTCAGCATATGTATCCCCAAAATGTAAATATGACATTCATGTCAACAACATTGCATTGGTGCCAGTATTAACT
TTGTGAATCACCTGCACCAAATGAATATACCCACTTGTTTGGATATTTTTATTCCCATGCCAGAAAAGGCATATGCTCAA
ATTGGTTGCAAACAATTGTACTACCAGATGTGTGTCGAATGGAGC-TTGACAGAATACAGTGGTGATATTGAAACTCAGT
AACAT-----------CCTCCATTGTTTTGTAACTGGTGGCACTTAAAACCGAAAATCTGTACCCTAAAGCACAAGGAGC
AATCGTGCCATCACAACCAAATAAGAAACTAATGGCACATCTGGAGCACACAA-GCCCAGCCACTGGTGTTGTTCCTTTT
ATTCTGGGAGACCCACCCAATTTTACACAGATCCAAAACGCAAAGATGAAGGGGGTAATCATAGGTCGTCTACATTGCAT
TCTCCAAGGTAAACCTTGACGCTTCGAGGAGAACCGCAGCTACCTTCCGCTATAAGTGCTCTATCGTTGGCTGCCATGTG
CTGAATTATTTTGTATATCATCTCAATCTGATGCAAATAAAACACATAATGCACGAGTTAAGATATCGCAAAATAGAAGT
TGGCAAAAAACAAAAGGCATGAGAAAGGTGAAATTACATCTTCAGGGCAATGGCAACGATCTGCGATTTGCTCCAGGGTC
AATGGTTCAGCAGGGTCTTTGCAGCTGAAAGAGAACAAGAAACATATATGACCAACAGGAATCTAAGCACCCCCAGAAGG
AGCATTTATAGGATTAATCAACGGAAGTCAAAGTGCAGGCATAAGTCAACAATATTTCATGTCTTCAGCAGTTCTGCTAA
TAACCTGGAATTCTG-------------------------------------------TGATGTGCTGAAATTGAAAGCA
CA-TTGCAGTGAAACTAACAATAAGAGATGCTTGTCATAGGGTGAATTGCAAACCATGAC--------------------
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----------------------
>chr7A_2
-CATACCGGAGCTGGCCTGACCTTGACGATGACATCTAAGAAGTCTTTGTGCACGTGCCCCTAAGGACCAGCTTCCCAGA
GCCGCATTCGTCGTTGTTGAATCCTTGAATAGATCTGAAGAATTTGATACCAAATATCGCCGTTGCTTACGCATGGCCAG
AAACCCTAAGCTCGCCGCCCCGAGGAGCTGGCAGGAATCTACGCCACAACTCCGTCTAATCCATCCCAGCAAACGAACTT
GAGGAGGATCGGAGCCCGAAAGACTGACTCGAAGAAGAGGCGCCCCCATCTGTCCAAACGCCGCCCCTGCGAGGACTAAA
ACCCTACCAATTTACTAGCTGGAGACAAGGCCCCATAAAT----TCCCTCCCGCCGGCCGTCGGAGTGGCAAGTGGAGGG
GAGGCGAATCCACGGGCTCGCCGGTGAAGATCGAGGGAAGGAAGGCTTTCCCTAGTAGCCTTACGAGAGGGGAAAGAAGT
TGCGACTTCTAATATACTTGCCCTTAAACATGGACATGATTAATCATGTTTAATATTAGATGAATAGCTAATTGCAGTAG
TGAATATAACCATGTTTGGTTGAAAAATTGATTGACTTGCATTATGTTGGGCACAAATCCTTCAAATCATTTGGAGCATA
ATATCCATACATTAACATCCCATTTCTAACTTTAATGTAGTAGCCACCTCATGCAAATCCGCTAAAAGAAACACGTAGGC
AACTCAAATTTTGTACAACCCCAAGGATTAAATATCTAATTTATACTACTTCTCCAATCTTAGAAAACATCACAAAAATA
AGTAGAAGGGACGGTAGACATCACCGGGCTGGTGGTGCCATGGCTCAGATCCATGAATTACGATAGGAAGTCTTATGATA
TTTCAGACCAAACCCTCAAAAGGGCTCAACCCCTCAAAAGATTCCTTTTTGAGGTGTTAAGACGCACTGAGCTGAACTCT
CATTTCCTTTAACTCCTCCCATTTTTGGAGAAGTGTTGGTTGTCTATCAAATTTTAGCATCCCAAAA-------------
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----CAAGTCTCAACAAAAGATTCCCTCAAGATTCTCTCTCTTGCACGCGGCT---------------------------
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---------------------------------------------------------------------GCCTCCCTCTC
TTGCTTGGCCGCCTCCAAGCGGGCGCCGCTCCGCCGTGTTACTCTCCTTTGACGACCACCATGCATGCCGGCCAACACCC
CGCAACCTCGCAGACCTCCGCCGCCAA-----------------------------------------------------
----------------------------------------------------------------------AATCCGGCAA
GGTTCCCGTGAGAATCTGACAAACTTTTGTTCTTCACTTTTTCAACTTTCCCATCATCTTGGTCCCCACTGGCACTCCTC
CTGCTCATCCCTAGCCTAGTGGCGCTACTCCCTGACATCCTAAGAAATAAGGGCTCAGTACGTCTTTCAGTTTAATATTA
GAGCCCCGACATCCTAAGCAATCTTTTCTAAAAGAATCAACTACTTCAGTTTATTCCAGTGCACCAATTTAATTGTTCTA
CTCATTCTTTCTAAAGGGCCTTCCATT---------CTCTTGTTTGAATCTCCCTCCGGGTCGCAAAGCCAAACCATTCA
TG------------------------------------------------------------------------------
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--GAACCTTTTTTTATCTAATATATTCTTTTTGCAAAAAGATCATATCTATTATTGATGATTCATTGGAAGCACAAAACA
CCTCAAACATAATAAAAATTTATATCGAGGTCCGTGGACCACCGAATGACCATTGCCG----------------------
---------------------------------------------------------------------CCGCCAGAACG
AGCTGCCAATGCGCCGCTGTCGCCGCTCCCATATCGGAGCTGGCCTGACCTTGACAATGACAGCTGAGAAGTCTTCGTGC
ACGTGCCCCTGAGGACCAGCTTCCTAGAGCCGCAATCGTCGCCGTTGAATCCTTGAATTGATCTGAAGAAATTGACAACA
AA-TATCGTCGTTGCGTATGCATGGCGAGAAACCCTAAGCTCGCCGCCCCGAGGAGCTGGCAGGAATCTACGCCGCAACT
CCGTCTAATCCATCCCAGCAAAAGAACTTGAGGAGGATCAGAGCCAGGAAGACTGACTCGAAGAAGAGGCACCCCCATCC
GTCCAAACGCCGCCCCTGCGAGGACTAAAACCCTACCTATCTACTAGCTGGAGACAAGGCCCAGAAATCTCCTCCCCCCG
GCCGTCGGAGTGGTAAGTCGAGAGGAGGCGAATCCACAGGCTCGCCGGTGAAGATCGAGGGAAGGAAGGCTTTCCCTAGT
AGCCTTACGAGAGGGGAAAGAA
>chr5B_821
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----------------------------------------------ATGTGGGGTCAAAGCCCTTGTATCTTGCAATTTG
CAAGCAACATGAACGGCGAGCGTCCGCAAACGCAAACACGTGTGCAGGGAGGAAGCACCGTCGGAGACGAAACCAAAGCA
GCAAAAACAACTTCTCCGGTTAATAATCCAATCATCGCACGGAAA-CACCACGTCTCGTCTCTCCATGTAGCAAAAGCAA
TTGGTAGCAGAAGA-AAGACGCCACGCAAAGCCCAGTCCGGCGTCGCCTCCTCCTCCTCCGGCGATAGGGTTTCTCCCGA
TGGAGCAGCTCTCCACCTCCTCGCCGGCGGCGCCGCCCCCGCCCCCGTGGCGGCCGCCGACGAAGATCAGGCTGCGGCGC
CAGAGGCTGGAGGCGCTCCTGCAGGAGCTCCGGCAGACGCTCGACGGGCTGGGCGACGCCGATCTCGGCGCCTCTCTCTC
CGACGCGGACGCCTACACCGAGGCGCCCGAGTACGGGGACAGCGAGGGCGGCGGA---GACGACGACGACGGTGACTCGG
CGGCTTCGATGGCGAGCGACTCCGACCGCGCCACGGACCAGGTACGGAC-----GCGGCGAGGTTTGGGACTTCCGAGCC
TGAAAATTTTCAGACCATGAGGCTTTAATTAATCGCATTAACTGGCGCGTAACTGTTGACCAATTGCGGTAATTCGACCA
AGTTCTCGTTAGGTTC-----GTCGAACTAACTTGATCGGTTATTAGCCATCTGGATCTGAGTTGCGTACCTCGA---TT
CCGGAACTAATTA-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------AAAAGTGTTTCGATACTACTGTTTCTCATATTTGTATGTGATTCGTCTGCTTGGCGAGTGCTGACTGC
GGACGAGTTGCGAACATCTGGAGTCAGATAAGTCTACCATGGAAAGGTGTCCTTTTACTAGAAGCAGGATCAGATGCAGT
GAGGTTATCCAAAATAAAGATGTTGACATCTGTGATGGCGGAACAGTGGAATGTGATGGTTTAGGCTAAACATCTTCCTA
GTATTCATAAACTAGGAATATAACTGCCGTTAACAGT-GGTGAGGATCAAGGATCAGTATAGCACGTGCAATCATTTTTC
TATATTACATGTTATC---CCCACTTTTCCCATTTAGAATGTGCACCGAACAATCTCATGTCACTTTGGTTTTATTTTCT
CGAGTGATATGAGGGAGAGCATGGAGAGTTTTTATTATAGTTCATGTTGCTATGAAGCTGTTAGCTGTCCCAACGCTCTG
AAGATTGAACGGCTTGCTTTCACCTTGCAGGTGTTTGATCTCCTTAAATCTAGGTTTGAGTCACCAGAATTTCTTCAGGA
GTTCCATGAAATTCAAAAGTCTGTATGTCAAAACGGTGCAGGTATTCCT-CTACTG------------------------
----------------------------------------------AATAACTCATGCACTGGAATGTTATGTTTCGCAT
ATCTTTTTAGTTAACCTTTCTCGAAATAGAGTTGTGATACTCTA--GTTCATTTGATGTTCTTTGCTGCAGTTGAATTGG
ATACATCATGGGATGTGATAAAGGCGGGAGATTTGTGGGAAGATGATGACGACAATGGATATGTTCTTGTTAAGCCAGAG
GATGCAGCTGAAGGGATAGCTTTCTTTGTAGCCACATACTTATCGACACTTACAAAAACCAAGGTAGGAATGTCCTGCTA
TTTTCACTTCAATGTGATTCAATCATCAACTTGAAACCTTCGTTCTTGTTCCCTTATGATGTGGTTTGATGCAATGAACA
ATCATTGGTCTAACGTCTGTCCACATGATAATCAGTATATCTGAGAAAAATTGGTTCATTTCTGTGTCACACATCTCTCT
TTATAAGAGATGCCCCAGTCACCATGTTCCCGACTTGATATACTTGTGCTGCTCTTCTCTATAATATCTCACTG---TCG
TTTTTTTTACCGACTCGTTTCTCTTCATGTATGTGAGTTGATCTATACATCTGATCCATGAATATCTCATGTTCTACAGG
AATTATCTCCTGATCGACTTCAGAAAGGTTTGCTCTCTCTTTTCTTTGTTCATCAGAATGATTACTTGAATCATTTCAAA
TGAAAGTTTTGATACTGAACTTCATCACCGCTCTTCTGTCAGCCCTTAAGAAGACATTTTCAGCCGAGAAGAGAAAAGGC
AAACTTCGGAAGGCATGGGATGGGACAAAAGTCATTTATAATGTAGCTTCATGGGGTGCCACAGCTGTTGGGTAAGTTAT
TT------CCTTGGGCATGAACTTTTGAGAAATGTTGACCCAACCTGCATAACTTGTTACTAAGCTTGAGTT---CCCGA
GGGAAATACTGCAAATTAGTTTTCTGTCCAATCCTCAGCGGCTAATTTCATTTCACAAAGCACACAAGCTGGTGATGAGC
ATAGTCAAATGTACTGCCAGTTATGTCTTCAGTGTTTGCCTCGGTCATCCATTTGGTAACCTCATCCAATCTAGTGGGTT
ACATATTGCTGCAAGCTTCAAAATGCTCCTG--GAGAGGTTAGGCTCTATTAGTCTTCACTAGTACTCTTTACTAATTAA
CCCTAGGAGCAAATATGTGATATGTGTCAGCCCCATGATTGATCACTTCCAAGATCTGATGGAGTCAACTAATCTAGACT
GGTTGTGGCCTATGTAAGATTGCCATAATTTGGGGCATCAATCGGGGATGGG-ACCTGTTCGGACAAGGGACAGTCACAC
CCTTAAAAATTGCATCTAGATAATACTCCCTCCGTCCTAAAATGAGTGTCTTGAGCTTAGTACAAATTTATACTAGAGCT
AGTACAAAGTTGAGACACTTATTTTGGGACGGAGGGAGTAAATTATTAACAGCCCTTATTTCATTTGTAAGTACTGCATG
TATGCATAATACATATCCTGTGTGATCTGATTGCAGTGCACATTTTTCATGGTAACAGCATCTACAATAACCAAGCAATT
CTTAAGGCAGCAGGCACAGCCATTCAGATGTCCTGGCGTGTGGTGTCCAAGTTCCTGTGAGTGATGGGTGGTGGTGATTG
TTGTTACTGGCGTGCTACATTTATTTAGGTATAAAGGA-TACCACATTGGTTGGAAATGTCC--GAGTAGTTGATATACT
GCCGATTGAAGAATTGAGGTCTAGAGTTTAGGTCTATTGGGATGCTTGAAGGATTGAGGCTTAGCGTTTAGGTTTGTTGA
TTGAAGGCTCGGAAGCCCATTTAAATAAATTACGCTGGTGCTCGAATGTAAATAGGCCATTAATTTGGCTGCGTGAAGCA
ACTGAAGCTCAGCATATGTATCCT-AAAATGTAAATATGATTCATTTGATAACTTCACATTG--G-TGCCAGAATAAACT
TCGTGAATAAACTGCACCAACTGAATGTGACCATTTGTTTGAATACTTCTATTTCTGTGCCAGAAAAGGCATATGCTCAA
ATTGATTGCAAACAATTGTACCAGATGT--TGTATCGAATGGAGCTTTGACACATTACAGTGGCGATATTGAAACTCAGT
AACATATGCAGGGCATCCTCCTTTGTTTTGTAACCGACGGCACTTAAAACCAAAAATCTGAACCCTAAGGCACAAGGAAC
AATCGTGCCACCACAACCAAATAAGAAACTAATGGCACATCTGGAGCATACATGGCCCAGCCACTGGTGTTGTTCCTTTT
ATTCCAGGAGACCCACCCAATTTTACA--GATCCAAAACGCAAAGATGAATGGGGTAATCATACGTCGTCTACATTACAT
TCTCCAAGGTAAACCTTGACGCTTCGAGGAGAACCACAGCTACCTTCCGCTATAAGTGCTCTATCGTTGGCTGCCATGTG
CTGAATTATTTTGTATATCATCTCAATCTGATGCAAATAAAACACATAATGCACGAGTTAAGATATTGCAAAATATAAGT
TGGCAAAAAACAAAAGGCATCAGAAAGGTGAAATTACATCTTCAGGGCAATGGCAACGATCTGCGATTTGTTCCAGGGTC
AATGGTTCAGCAGGGTCTTTGCAGCTGAAAGAGAACAAGAAACATATATGACCAACAGGAATCTAAGTACCCCCAGAAGG
AGCATTCATAGGATTAATCAACGGAAGTCAAAGTACATGCATAAGTCAACAATATTTCATGTCTTCAGCGGTTCTGCTAA
TAACCTGGAACTCTG-------------------------------------------TGATGTGCTGAAACTGGAAGCA
CATTTGCAGTGAAACTAGCAATAAGAGATGCTTGTCATAGGGTAAAGTGCAAGCCATGAC--------------------
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----------------------
>chr5A_889
AACAC---------------------------------------------------------------------------
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--------------------------------------CGTGTGCAGGGAGGAAGCACCGTCGGAGACGAAACCGAAGCA
GCAAAAACACCTT-TCCGGTTAATAATCCAATCATCGCACGGAAAACACCACGTCTCGTCTGTCCATGTAGCAAAAGCAA
AGCAATTAGTAGCAGAAGACGCCACGCAAAGCCCAGTCCGGCGTCGCCTCCTCCTCCTCCGGCGATAGGGTTTCCCCCGA
TGGAGCAGCCCTCCACCTCCTCGCCGGCGGCGCCGCCCCCGCCCCCGCGGCGGCCGCCGACGAAGGTCCGGCTGCGGCGC
CAGAGGCTGGAGGCGCTCCTGCAGGAGCTCCGGCAGACGCTCGACGGGATGGGCGACGCCGATCTCGGCGCCTCGCTCTC
CGACGCGGACGCCGGCTCCGAGGCGCCCGAGTACGGGGACGGCGAGGGCGGCGGAGACGACGACGACGACGGTGACTCGG
CGGCTTCGATGGCCAGCGACTCCGACCGCGCCACGGACCAGGTACGGTACGGATGCGGCGAGGTTTGGGACTTCGAGCCT
G--AAAA-TTCAGCGCACGAGGCTTTAATGAATTGCATTAATTGGCGTGTAACTGTTGAGCAATTGCGGTAATTCGACCA
AGTTCTCGTTATTTCAGGTTTGTCGAACTAACTTGATCGGTTATTAGCCATCTGGATCTGAATTGGGGGTACCTTTGTTT
CCGTAACTAGTTA-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------AAAAGTGCTTCGATGCTACTGTT-CTCATATTTGTCTGTGGTTCCTCTGCTTGGTGAGTGCTGACTGC
GGACTAGTTGTGAACATCTGGAGTCAGATA-GCCTACCATGGAAAGATGTCCTTTTATTAGAAGCAGGATCAGATGCAGT
GAGGTTATCCAAAATAAAGATGTTGACATCTGTGATGGTGGAATAGTGGAATGTGATGGTTTAGGCTAAACATCTTCCTA
GTATTCATAAACTAGGAATATAACTGCCGTTAACAGGGGGTGAGGATCAAGGATCAGTATAGCACGTGCAACCATTTTTC
TATTTTGCACGTTATC---CCCACCCTTGCCATTTAGAATGTGTGCCGAACAATCTCATGTCACTTTGGTTTTATTTTCT
CGAGTGATATGAGGGAGATCATGGAGAGTTTTTATTATAGCTCATG-TGCTATGAAGCTGTTAGCTGTCCCAACACTCTG
AAGTCTGAACGGCTTGCTTTCACCTTGCAGGTGTTTGATCTCCTTAAATCTAGGTTTGAGTCACCAGAATTTCTTCAGGA
GTTCCATGAAATTCAAAAGTCTGTATGTCAAAATGGTGCGGGTATGCCTCCTACTGAATGCACTTGTTACTTTGTTAGTT
ATTACTGCTGGTAGTGCCT--AATGTATCTAAGTATGGACACCTAAAATAACTAATGCAGTGGAATGTTGTGTTTCGCAT
ATCTTTTTATTTAACCTTTCTCGAAATAGAGTTGCGATACTCTAAAGTTCATTCGATGTTCTTTGCCACAGTTGAATTGG
ATAAATCATGGGATGTAATAAAGGCGGGAGATGTGTGGGAAGATGATGACGACAATGGATATGTTCTTGTTAAGCCAGAG
GATGCAGCTGAAGGGATAGCTTTCTTTGTAGCCACATACTTATCAACACTTACAAAAACCAAGGTAGGAATGT-------
---------------GATTCTATCATCACCTCGATACCTTCGTTCCTGTTCCCTTATGATGTGGTTTGATGCAATAAACA
ATCATTGATTTAACGTCTGTCCACATGATAATCAGTGTATTTGAGAAAAATTGGTTCATTTCCGTGTCACCAC-ATCTCT
CTATAAGAGATGCCCCAGTTACCATGTTCCGGACTT--TATACTTGTGCTGCTCTTCTCTATAATATATCAGTG---T--
--TTTTTTACCGAGTCATTTCTTTTCATGTATGTGAGTTGATCTATACATCTGATCCATGAATATCTCATGTTCTACAGG
AATTATCTCCTGATCGACTTCAGAAAGGTTTGCTCTCTCTTTTCTTTGTTCATCAGAATGATTATTCGAATCATTTCAA-
TAAAAGTTCTGATGCTGAACTTCATCACCGCTCTTCTGCCAGCCCTTAAGAAGACATTTTCAGCCGAGAAGAGAAAAGGC
AAACTTCGGAAGGCATGGGATGGGACAAAAGTCATTTATAATGTAGCTTCATGGGGTGCTACAGCTGTTGGGTAAGTTAT
TCCACTAACCCTGGGCATGAACTTTCAAGAAATGTTGACCCAACCTGCATAGCTTGTTGGTAAGCTTGGGTT---CCCGA
TGGAAATACTGCAAATTAGTTTTCTGTC---------------AATTTCATCTCACAAAGCACACAAGCTGCTGA---GC
ATAGTCAAATATGCTGCCAGCTATGCCTTCAGAGTTTGTCTTAGTCAGCCGTTATGTAATCCCTTCCAATCTAGTGAGTT
ACATACTG----AAGCTTCAAAATGCTCCTGAAGAGAGGTTATGCTCTATTGGTCTTCACTAGTC-------CTAACTAA
CCCTGGGAGCAAATATGTTATATGTGTTGGCTCCATGATTGATCACTTCCAGTATCTGATGGAGCCAACAAATCTAGACT
GGTTCTGGCGTATGTAAGATTGCCATA--TTGAGGCATCAATTGGGAA-TGGGACCGGTTCGGACAAGGGACAGTCATAC
CCTTAAAAAAATTCATCTAAATCATAAATAT-------------------------------------------------
----------------------------------------------TAACAG-CCTTATTTCATTTGTAAGTACTGCATG
TATGCATAATACATATCCTGTGTAATCTGATTGCAGTGCACATTTTTCATGGTAACAGCATCTACAATAACCAATCAATT
CTTAAGGCAGCAGGCACAGCCATTCAGATGTCCTGGCGTGTGGTGTCCAAGTTCCTGTGAGTGATGGGTGGTGGTGATTG
TTGTAACTGGCGTGCTACATTTATTTAGGTA--AAGGA-TACCACATTGGTTGGAAATGTCC--GAGTAGTTGATATACT
GCCGATTGAAGAATTGTGGTCTAGAGTAT--GTCTGTTGGGATGTTTGAAGGATTGAGGCTTAGCGTTTAGGTTTGTTGA
TTGAAGGCGCGGAAGCCCATTTAAATAAATTATGTTGGTGCTAGAATGTAAATAGGCCATTTATCTGGCTGTGTGCGGCA
ACTGAAGCTCGGCATATGTATCCCCAAAATGTAAATATGACATTCATGTCAACAACATTGCATTG-TGCCAGAATAAACT
TTGTGAATGAACTGCACCAAATGAATATGCACACTTGTTTTGATATTTTTATTTCCGTGCCAGAAAAGGAATATGCTCAA
-TTGATTGCAAACAATTGTACTACCACATGTGTGTCGAATGGAGC-TTGACAGAATACAGTGGTGATATTGAAACTCGGT
AACAT------------CTCCATTGTTTTGTAACTGGTGGCACTTAAAACCGAAAATCTGTACCCTAAAGCACAAGGAGC
AATCGCGCCATCACAACCAAATAAGAAACTAATGGCACATCTGGAGCACACAA-GCCCAGCCACTGGTGTTGTTCCTTTT
ATTCTAGGAGACCCACCCAATTTTACACAGATCCAAAACGCAAAGATGAAGGGAATAATCATAGGTCGTCTACATTGCAT
TCTCCAAGGTAAACCTTGACGCTCCGAGGAGAACCGCAGCTACCTTCCGCTATAAGTGCTCTATCGTTGGCTGCCATGTG
CTGAATTATTTTGTATATCATCTCAATCTGATGCAAATAAAGAACATAATGCATGAGTTAAGATATTGCAAAATAGAAGT
TGGCAAAAAACATAAGGCATGAGAAAGGTGAAATTACATCTTTAGGGCAATGGCAACGATCTGCGATTTGCTCCAGGGTC
AATGGTTCAGCAGGGTCTTTGCAGCTGAAAGAGAACAAGAAACATATGTGACCAACAGGAATATAAGTACCTCCAGAAGG
AGCATTCATAGGATTAATCAATGGAAGTCAAAGTACAGGCATAAGTCAACAATATTTCA-GTCTTCAGCAGTTCTGGTAA
TAACCTGGAATTCTG-------------------------------------------TGATGTGCTGAAATTGAAAGCA
CA-TTGCAGTGAAACTAGCAATAAGAGATGCTTGTCATAGGGTAAAGTGCAAACCATGAC--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>SNPs
-------S-----------------S-----S--S-SS---------S-----S------------------S--SSS-S
--SS--S------SSS----------S---S---SS-------S---S------------------S------SSS-S--
---S----------------S------------------------SS-----S---------S-------SS--------
-------------S----SS------S--SS-------S----SS-----S---------S----------SSSSS----
-S------S----------S-S-S-SSS---S---S----SSSS----SS--S-S---S-S-----S----S-SS----S
---------S--------------S-S-----------------------------S-----S--S------------SS
-SSSS--SSSSSS--SSSSSSS-SS-S--SSSSSSSSS--S-SSSSSSSSS-SSSSSS--SSSSSSS-SSSS-SSS-SSS
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------SS--S--S--S--S---S-SSSS-S-S--S-S-----SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS---SSS--S-SS--S---------SSS---SSSSS-SSS-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S--------------------------
--------------------------------------------S--------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------S-SS--------------------------------------------
-----------------------------S-----------------------SS----------SS-------------
-------------------S------------------------------------------------------------
-----------------------S--------------------------------------------------------
-----------------------------------S---------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-----------------------------------------SS------S------------------------------
-------------S---------------------------------------------------------------S--
-------------------SS-------------------------S---------------------------------
---------------SSSS----------------------------------------S--------S-----------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------S---------S-------------------------------------------
-------------------SS-----------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------S-------S----------------S----------------------
---------------------------------SS----------------------------S-----S----------
-S--------------------------------------------------------------------SSSSSSS---
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--S---S---S---------------------------------------------------------------------
-----------------------------------------S--------------------------------------
---S----------S---------------------S-------------S---------------------SSS-----
--------------------------S--------------------------------------S--------------
---------------------------------------------------------------------S----------
-------------------------------------------------------------------SS-----------
-----------S--------------------------------------------------------------------
---------------------------------------S------------------------------S---------
------------------S-S--S-S------------------------------------------------------
---------------------------------------------S----------------------------------
---S----------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------S------------------SS-SSSS----------------
--------------------------------------S-------------------------------S---------
-------------------------------------S-----------------------S-------S----------
-----------------------------------------------------------------S------S--S----
--------S-S-----------------S------------------------S--S-----------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
------S---------------------------S---------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>forward_514
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TGTCGTTACGCACACCCTAC----------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1956
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-----------------------------------GTCGGTTATTGGCCATCTGGA------------------------
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----------------------
>forward_517
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------CGTTACGCACACCCTACTCA-------------------------------------------
--------------------------------------------------------------------------------
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----------------------
>reverse_2421
--------------------------------------------------------------------------------
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--------------------CAACTGCCGTTAACAGGGGG----------------------------------------
--------------------------------------------------------------------------------
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----------------------
>forward_1340
--------------------------------------------------------------------------------
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----------------------------------------TGTGTAGGGAGGAAGCACCA--------------------
--------------------------------------------------------------------------------
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----------------------
>reverse_3531
--------------------------------------------------------------------------------
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----------CATGCTGAACTTCATCACCGC-------------------------------------------------
--------------------------------------------------------------------------------
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----------------------
>forward_2447
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---------------------------CGTTAACAGGGGGTGAGGAA---------------------------------
--------------------------------------------------------------------------------
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----------------------
>reverse_3755
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------CCCCGA
GGGAAATACTGCAA------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------
>forward_2540
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---------------------------------------TGTGTGCCGAACAATCTCATT--------------------
--------------------------------------------------------------------------------
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----------------------
>reverse_3787
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------ACCAATCCTCAGCGGCTAAT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------
>forward_2820
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
ATTACTGCTGGTAGTGCCTG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------
>reverse_4120
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--------------------------------------------------------------------------------
---------------------------------------GATCGGGGATTGGGACCTGT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------
>forward_3235
--------------------------------------------------------------------------------
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------------ACGTCTGTCCACATGATAATCGA---------------------------------------------
--------------------------------------------------------------------------------
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----------------------
>reverse_4710
--------------------------------------------------------------------------------
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---------------------------------------------------------------------CGCGTGAAGCA
ACTGAAGC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
