>input_sequence_26101
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---------------------------------------------------------ATGGACGGCGAGCCTCTGTGGCA
CAGGAGCTTCCCCGGCAACGTCAGGAAAGAGATCATTCACAGCCTCGGCAGCTCCACCAAGGAAGCCTCGCCGCAGTCCG
ACCTGTGGACCGGAGGCCTCGTCTGCGCCTTCGAGTTCGTCCGCGGCCACGGCTTCGCTAGCCCGCCCAATCTCTCACGG
AACAACTCATCGCAATACTCCAAAGACCATTC---AGCCATGGATCCCACGAAACTACCCATCACCAAGTTGGGGGACGT
TTCGTCTCAAGGCATG---------TTTCTTGGTTTGATTCCATTTCGCGGTAGAAAGCCCGCTTG-------ACAGACA
GATTGGCAACCGGTAGGTTCGGAGGACAGCGAGGAGCCGAGGCCGGCATGCAAGCACGGCAAGGCGTCGCCGGAGAGCTA
CTGGGCGCCGATCGGGTGGAGGAGGATAGCGGAGCTGGTGGAGATGGTGGAGGGGGACGCGGCGTGGGACGGACAGGGAA
TGGGCGGCCTCATGGACGACGGCGACCAGTGCTGCGATATCACCGTGGCCGATGTCGCCGCGCCGTACTGGCAGAGGCCG
GCGGGGCCGACCTGGTGGTGCCACGTGACGGCGGGACACCCGGCGGTGGACGCCTGGCTTGCCGGCGCGCGATGGCTGCA
CCCGGCGATCCGCGTGGCGCTCAGGGACGAGAGCATGCTCATCAGTGAGAAGATGAAGCATCTACTGTACG----AGGTG
ACGGCCTGAATTAAT--AATTCTTTGTGTACCATCTCCATCTAGTGGACAAAATAATTC----------ATGGCGATCCA
TACCGCTCAGGTCCCCGTTAGAGTTGCAGGCGGCTTGCTGTTCGAGCTATTGGGCCAGTCCGTGGGCGATCCGGCCGGCG
ACGAGGATGACATTCCTATTGTGCTCCGTGCATGGCAAGCTCAAAATTTTCTGATAACAGCGCTTCATGTGAAAGGTTCT
GCGACCAACATTAACGTCATAGGGGTTACAGAGGTTCAGGTACCATTTTTCAGTGAACAGTTTCAAGTAAGAACCATCTC
TAATCTGTCAATTTTCCTCTTCACCTGCATAGTCTTGCTCGCTGCAGGAGCTTCTTTCTGCATGTGGAAGCACAGCTCCT
AAAAGTATCCATGAAGTTGTAGCGCATTTGGCCTCCCGCCTTGCTCGATGGGATGACAGGTGG---TACTGAATTTTTAA
GAAGCACAACTACTCAGTGTTGTAACATCTAGTCAT--------------------------------------------
--CATCATACTTACCTGACAGATTGTGGCGCAAATACGTGTTTGGTGCAGCCGATGAAATTGAAGTTAAATTTGTAAACA
GGTAAGTTATATACT-----TTAATACCCTTGGTTTCAT-GAACCTCTTTCCTCTTTGGCTAGAACTATGTGACAGTATG
A----GCATGTTCAGGAGAAATCAAGAAGACCTAAACCTGCTGTGCATAATATTTAACCAAGACATTAGAAGGTTAGCCA
CTCAGGTATGTATATTCAGAATGAGTAAGTTCAG-------TACAGTGGATATAGGGCGTGTTTGGTTACTCACTGCATT
TTTGGGCTTCCTGGAAACCTGGCCCGGTAGAGCCTGTATGGGCTAATACGAGGTCTGAGCCGAGTTGTGTAGTTCGTTTG
GTTGCTCCCATACTGGTTCGGGC--------------------------------------------------CTGCAAA
CCGCCGATTTGAGGGCTCCCCCCGGGCCAGGCTGAGGGTTTGCTTTGAGGAGCGGGCAGGCATGTTTCTCTTTGTGGACC
GGATTTGGCCGCCCAGAGCCTGCATGGCTGTTATGCTAGCAACCAAACACACACATAATGAATATATGTATTTCTCAAAA
AAAAAAAG-------TTGAACTAAATGCATTTTGTG-----AATAGGTTATCAGGGTGAAATGGTCACTGCATGCTAGAG
AGGAGATAATATTTGAGCTGCTCCAGTATCTGAGGGGAACCGCCACCAGGTTCTTGCTTGAAGGTATCAGGAAAGACACA
AGGCAAATGATAGAAGAGCAAGAGGCTGTCCGTGGCCGGTTGTTCACCATCCAGGATGTGATGCAGAGCACTGTGCGTGC
CTGGTTGCAGGTAAATACTTTGGCAGACTCACTCTTGTGGGATCTGATTGGAATTTTTGTACTACTCCCTCCATTTCTAA
ATCTAAGTCTTTTTAGAGATTTCGA----TACAGACTACATACAGATGTATTTAGACATATTTTAGAGTGTAGATTCACT
CGTTTCGCTCCGTATGTAGTGTCTATTGAAATCTCTAAAAAAGACTTATATTTAGGAACGGAGGGAGTAATTGATAAGCG
ACAACATGAACCGTAGTTTGCTAACAAG---------TAAAAAAAATTGTGGGTATGCTAACAAGTAATATGACTG----
--------------------------------------------------------------------------------
-----------------------CCTGTACCTTTTCTA------TGATATATGGAAGTATGAGCTATGAACTCGATCGGT
TGTTGTGATACTCAGGATAAGAGCCTTCGCATCACACATAACCTGACCATTTTTGGTGGGTGTGGCCTCATTCTGTCAAT
CATCACCGGATTGTTTGGGATCAACGTGGACGGCATCCCAGGAGCTAAAAACACTCCATATGCTTTTGCATTGTTCTCCG
GGCTTCTGTTCGTGATTGGGTTCATGCTGATCATCGTCGGAATCGTCTATTTCGGACTGCAGAAACCGGTCAGTGATGAG
CAGGTCCAAGTGAGAAAGTTGGAGCTCCAGCAGCTAGTCTCCATGTTCCAGCACGAGGCCGAGACACACGCCAAAGTGAG
AGAAGGAGTCCTGAGGAGCGACTTGCCTCCTAGAGCAGCTGATCTCATCTATGACAATGGTGATGCGTGTCTCCTTATAT
C------CCCAGCATCTAAAATTGCAACGTTACTAATA---TATTTTT-GTTATCCATGC--ATGCATCCATCAGTGCGT
AAACTTGGAAGGTATTTCCCGTTCGAAGCAAAGTGTGAGCCACCGCTTCAAGGTTACCACTTGGTTTCGCTTTGCACCCT
GTAG----------------------------------------------------------------------------
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>chr3D_1_TraesCS3D01G217500
AGATTTGGAGGCTGGTGCACGGAAAGCAACTCAACCCATACGGGCAAGACAAGAT-TCGCTGGCTCAGAGAAAAGGAGGG
GGCTTACACTACGAGTTCAGCATACAAGGTGCAGTTTCAGGCCTCAGAAGAAACTTGCCTCAGATCCTGTATTTGGAAGC
CATGGACGTCGGCAAAGCTTAAGATGTTTTTCTGGTTGTTGCATCTGGACCGGCTATGGTGCAATGACTGTCTGCTGCGC
AGAGGCTGGCCAAATGGTTACGTCTACGCGCTCTGTCAGAGGAACCTGGAGTGCTCGGTACATCTATTCTGGAGCTGTCC
TTTGTCCTCTCAAGTGTGGCGGGAGGTCACTTCCTGGGAGGGTTGCTCAGCTCTTAATGCACGGGAACACT-CCGTCTGG
TCACCAGGACTTCAATCTGTCAGGCGATCATCAGGAAAGCAACAAATGAGCACCGGTGGGGCATAAAGACTTTGATCATT
CTGGTTACCTAGGAGCTCTGGAAGGAGAGGAATGATGTTGTCTTCAGGAGCAAAACACCTGATCAACAGTGCC-------
--------------------------------------------------------------------------CTGCGA
GATAATGGCTGAGATTGTTTTGATGCTTTGC--ATCGTGTCCACACGATGTTTTCTATCGGCCACCGATCACTTGATCAA
ACTTTGTACCGCTCCCTTCTGCTAAATCTATAAAGCCAGTATAAAGCTAGATCTTTCAAAAAAAAAATCTCCGTCACTCA
GCACAGGTCCCACGAAGCACCTACAAAGAACAGTCGTAGCTAGTCATACAGAAGGAGCTGGTACAGCGCCGCGGACGCCA
CGTGTCGCGTCGGCTCCTTGCGCACCGCCTCCCAGCCCTCTGACACGCGTGCCTGACACGCCCAAAAAGTAGATACATGT
GGCACCCGCTCCCCCGCTTCCAC------GCCCCCACATAACCGCTGACAAGAGCGACCGCTTCAAACTTGAAATATCCC
GTACATCGCCGCCGTTGCGTTCGCCG------GCTTCTGCTGCTGCTGATCGACACGATGGACGGCGAGCCTCTGTGGCA
CAGGAGCTTCCCCGGCAACGTCAGGAAAGAGATCATTCACAGCCTCGGCAGCTCCACCAAGGAAGCCTCGCCGCAGTCCG
ACCTGTGGACCGGAGGCCTCGTCTGCGCCTTCGAGTTCGTCCGCGGCCACGGCTTCGCTAGCCCGCCCAATCTCTCACGG
AACAACTCATCGCAATACTCCAAAGACCATTC---AGCCATGGATCCCACGAAACTACCCATCACCAAGTTGGGGGACGT
TTCGTCTCAAGGCATG---------TTTCTTGGTTTGATTCCATTTCGCGGTAGAAAGCCCGCTTG-------ACAGACA
GATTGGCAACCGGTAGGTTCGGAGGACAGCGAGGAGCCGAGGCCGGCATGCAAGCACGGCAAGGCGTCGCCGGAGAGCTA
CTGGGCGCCGATCGGGTGGAGGAGGATAGCGGAGCTGGTGGAGATGGTGGAGGGGGACGCGGCGTGGGACGGACAGGGAA
TGGGCGGCCTCATGGACGACGGCGACCAGTGCTGCGATATCACCGTGGCCGATGTCGCCGCGCCGTACTGGCAGAGGCCG
GCGGGGCCGACCTGGTGGTGCCACGTGACGGCGGGACACCCGGCGGTGGACGCCTGGCTTGCCGGCGCGCGATGGCTGCA
CCCGGCGATCCGCGTGGCGCTCAGGGACGAGAGCATGCTCATCAGTGAGAAGATGAAGCATCTACTGTACG----AGGTG
ACGGCCTGAATTAAT--AATTCTTTGTGTACCATCTCCATCTAGTGGACAAAATAATTC----------ATGGCGATCCA
TACCGCTCAGGTCCCCGTTAGAGTTGCAGGCGGCTTGCTGTTCGAGCTATTGGGCCAGTCCGTGGGCGATCCGGCCGGCG
ACGAGGATGACATTCCTATTGTGCTCCGTGCATGGCAAGCTCAAAATTTTCTGATAACAGCGCTTCATGTGAAAGGTTCT
GCGACCAACATTAACGTCATAGGGGTTACAGAGGTTCAGGTACCATTTTTCAGTGAACAGTTTCAAGTAAGAACCATCTC
TAATCTGTCAATTTTCCTCTTCACCTGCATAGTCTTGCTCGCTGCAGGAGCTTCTTTCTGCATGTGGAAGCACAGCTCCT
AAAAGTATCCATGAAGTTGTAGCGCATTTGGCCTCCCGCCTTGCTCGATGGGATGACAGGTGG---TACTGAATTTTTAA
GAAGCACAACTACTCAGTGTTGTAACATCTAGTCAT--------------------------------------------
--CATCATACTTACCTGACAGATTGTGGCGCAAATACGTGTTTGGTGCAGCCGATGAAATTGAAGTTAAATTTGTAAACA
GGTAAGTTATATACT-----TTAATACCCTTGGTTTCAT-GAACCTCTTTCCTCTTTGGCTAGAACTATGTGACAGTATG
A----GCATGTTCAGGAGAAATCAAGAAGACCTAAACCTGCTGTGCATAATATTTAACCAAGACATTAGAAGGTTAGCCA
CTCAGGTATGTATATTCAGAATGAGTAAGTTCAG-------TACAGTGGATATAGGGCGTGTTTGGTTACTCACTGCATT
TTTGGGCTTCCTGGAAACCTGGCCCGGTAGAGCCTGTATGGGCTAATACGAGGTCTGAGCCGAGTTGTGTAGTTCGTTTG
GTTGCTCCCATACTGGTTCGGGC--------------------------------------------------CTGCAAA
CCGCCGATTTGAGGGCTCCCCCCGGGCCAGGCTGAGGGTTTGCTTTGAGGAGCGGGCAGGCATGTTTCTCTTTGTGGACC
GGATTTGGCCGCCCAGAGCCTGCATGGCTGTTATGCTAGCAACCAAACACACACATAATGAATATATGTATTTCTCAAAA
AAAAAAAG-------TTGAACTAAATGCATTTTGTG-----AATAGGTTATCAGGGTGAAATGGTCACTGCATGCTAGAG
AGGAGATAATATTTGAGCTGCTCCAGTATCTGAGGGGAACCGCCACCAGGTTCTTGCTTGAAGGTATCAGGAAAGACACA
AGGCAAATGATAGAAGAGCAAGAGGCTGTCCGTGGCCGGTTGTTCACCATCCAGGATGTGATGCAGAGCACTGTGCGTGC
CTGGTTGCAGGTAAATACTTTGGCAGACTCACTCTTGTGGGATCTGATTGGAATTTTTGTACTACTCCCTCCATTTCTAA
ATCTAAGTCTTTTTAGAGATTTCGA----TACAGACTACATACAGATGTATTTAGACATATTTTAGAGTGTAGATTCACT
CGTTTCGCTCCGTATGTAGTGTCTATTGAAATCTCTAAAAAAGACTTATATTTAGGAACGGAGGGAGTAATTGATAAGCG
ACAACATGAACCGTAGTTTGCTAACAAG---------TAAAAAAAATTGTGGGTATGCTAACAAGTAATATGACTG----
--------------------------------------------------------------------------------
-----------------------CCTGTACCTTTTCTA------TGATATATGGAAGTATGAGCTATGAACTCGATCGGT
TGTTGTGATACTCAGGATAAGAGCCTTCGCATCACACATAACCTGACCATTTTTGGTGGGTGTGGCCTCATTCTGTCAAT
CATCACCGGATTGTTTGGGATCAACGTGGACGGCATCCCAGGAGCTAAAAACACTCCATATGCTTTTGCATTGTTCTCCG
GGCTTCTGTTCGTGATTGGGTTCATGCTGATCATCGTCGGAATCGTCTATTTCGGACTGCAGAAACCGGTCAGTGATGAG
CAGGTCCAAGTGAGAAAGTTGGAGCTCCAGCAGCTAGTCTCCATGTTCCAGCACGAGGCCGAGACACACGCCAAAGTGAG
AGAAGGAGTCCTGAGGAGCGACTTGCCTCCTAGAGCAGCTGATCTCATCTATGACAATGGTGATGCGTGTCTCCTTATAT
C------CCCAGCATCTAAAATTGCAACGTTACTAATA---TATTTTT-GTTATCCATGC--ATGCATCCATCAGTGCGT
AAACTTGGAAGGTATTTCCCGTTCGAAGCAAAGTGTGAGCCACCGCTTCAAGGTTACCACTTGGTTTCGCTTTGCACCCT
GTAGTAGCGAGATGTGAGGTTAGCACATCCATCCACCAGACTTTCAGCTTTCACCA-TGCAGAGTGACATTGCTGATTTT
CCTTGATCCATGCAGGTGAAGAGAGCAGCCGCAAATGCGGTTGGTTCGTTGCAGCGTGTAGACAAGTTCTGAAGAAACTC
CCA-AGCGTGTTGCACCCTTTTCAG----------GGGACGGCACACGGCAGCCTTTAAGACGAAGATCTACCATCGTCG
CATCTCTGTAAAGTCTGCGTGTATGTGGTCTCAC------------TAGTGTTTCCTCGAGCAATCACTCTCATGATCAG
GTGATATTCACGTGGCCAGAGCCCTCGATGTGAGTCTTAGCTTTACTTTCACATGGACAGCAAG--AGGGAGGCCGATGT
TTTTTCTTGTGCATGCGGATATCTTA-----------------------TTAAAAGTGCCAATCAAAACAAAGTCTGACA
TCCAGTGCAGCTCTCGGAAGGT----------------------------------------------------------
-----------------------------------------------------------GCACAAAGGGAGAAAAAAAGG
CTACAATCGGCAAAAAAACAAGACAAGATGACTAAATTCCTATTCTATTATTGGATCGTCATCTAAATCGGTTGTATATA
TCCCATGCTACCGTCTCCCAGTGGTTGCACTCAATAACCAAAAGCTCCATGTAGTCCCTACCGTCTCCCAACACTGAGGC
CGATGTAGCTGCAACTTTCCAAGTGCCACTTCCTGTCTCGAAATGTTCAAATGTTTCTCTATAGTGTTTGTGGAGTCAGA
A-----------------------------------------CAACTATAGCAATAGTCCCTCAAAACCGGGTAAGGGGG
TACAAAATTCGTTTTCAAGAGTTAAACCGGACCTAGCCAAACCTTAATCCGGCTTAACTGCTCGAAACTTTTACTCCTAG
CTTCTACCGTGGCTCAATCTCAGG-ATATATCACCCCTTCCCCGCGCTTGTACTACATCGACGTCCGCGCCGCCAAAATC
CAGCATAGCACTCGCCCTCCCATGCCTGGCACTTCCAATTAACCGGTGCCGCCCTCGACTCCCCCGAAATGGCAGGATTT
AGCCGTCAGAGG
>chr2B_2
-GATTTGGAGGCTGGTGCATGACACGCAGCTCAACCCAGACAAGCAAGACAAGATATCGCTGGCTCAAAGAAAAGGAGGG
GGCTTACACTACGAGTTCAGCATACAAGATGCAGTTTCAGATCTTAGAAGAAACTTGCCTCCGATCCTGTATTTGGAAGC
CATGGGTGCCGACAAAGCTCAAGATGTTCTTCTGGATGTTGCATCTAGACAGGCTATGGTGCAATGACCATCTCCTGTGC
AGAGGCTGGCCAAACGGTTACTTCTGCGTGCTCTGCCAGAGGAACCAGGATTGCTTGGTGCACCTATTCTGGAGCTTCCC
TTTCTCCTCTCAAGTGTGGAGGGAGGTCTCTTCCTGGGTGGGATGCTTGTCTCTCAATGCACGGAAGCGCTCCCGTCTGG
TCACCACGACTTCAATCTACGAGGCGATCATCGGGAAAACAACAAAGGAGTACCGATGGGGCATCAAGACCTTGATCATT
CTGGTTACCTGGGAGCTCTAGAAGGAGAGGAATGCTGCTGTCTTTAGGAGCAAAACACCTGATCAACCAACGGTGATCAG
TGCCATCCATGCCGCCTTCGAGCTTTGGAGACTCGCGGGAGCAAAGGATAAAGCGCCCCAGTTTGGGGAACGTACTGCAA
GATAGCGACTGAAGATTATTTCTATTGTCTTTTATCGTGTCCGCATGATGTTTTCTCTACT-------------------
----------GCTCCCTTCTGCTAAATCTATAAAGCCAGTATAAAGCTAAATCT--------------------------
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>chr3B_745
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-----------------------------ACAGTCGTAGCTAGTCATACAGAAGGATCTGGTACAGCGCCACGGACGCCA
CGTGTCACGTCGGCTCCTTGCGCACCGCCTCCCAGCCCTCTGACACGCGTGCCCGACACGCCCAAAAGGTAGATGCATGT
GGCAACCGCTCCCCCGCTTCGCTTCCACTGCCCCCACATAACCGCTGACAAGGGCGACCGCTTCAAACTTGAAATATCCC
GTACATCGCCGCCGTTGCGTTCGCAGGCTTCTGCTTCTGCTGCTGCTGATCGACACGATGGACGGCGAGCCTCTGTGGCA
CAGGAGCTTCCCCGGCAACGTCAGGCAAGAGCTCATTCACAGCCTCGGCAGCTCCACCAAGGAAGCCTCGCCGCAGTCCG
ACCTGTGGACCGGAGGCCTCGTCTGCGCCTTCGAGTTCGTCCGCGGCCACGGCTTCGCTAGCCCGCCCAATCTCTCACGG
AACAACTCCTCGCAATACTCCAAAGACCATTCAGCAGCCATGGATCCCACGAAGCTACCCATCACAAGGTTGGGAGACGT
TTCATCTCAAGGCAAG---------TTTCTTGGTTTGATTCCCTTTCGCGGTAGAAAGCCCGCTTGCGGCTTGACAGACA
GATTGGCAACCAGTAGGTTCGGAGGACAGCGAGGAGCCGAAGCCGGCGTGCAAGCACGGGAAGGCGTCGCCGGAGAGCTA
CTGGGTGCCCATCGGGTGGAGGAGGATAGCGGAGCTGGCGGAAATGGTGGAGGAGGACGCGGCGTGGGACGGGCAGGGGA
TGGGCGGCCTCATGGACGACGGCGACCAGTGCTGCGACATCACCGTGGCCGATGTCGCCGCGCCGTACTGGCAGAGGCCG
GCGGGGCCGACCTGGTGGTGCCACGTGACGGCGGGACACCCGGCGGTGGATGCCTGGCTTGCCGGCGCGCGATGGCTCCA
CCCGGCGATCCGCGTGGCGCTCAGGGACGAGAGCATGCTCATCAGTGAGAAGATGAAGCATCTACTGTATGAGGTAGGTG
ACGGCCTGAATTAATC-----CTTTGTGTACCATCTCCATCTCGTGGACAAAATAATTC----------ATG--------
--CCGCTCAGGTCCCGGTTAGAGTTGCAGGTGGCTTGCTATTCGAGCTATTGGGCCAGTCCGTGGGCGATCCGGCCGGCG
ACGAGGATGACATTCCTATTGTGCTCCGTGCATGGCAAGCTCAAAATTTTCTTATAACAGCGCTTCATGTGAAAGGTTCT
GCGACCAACATTAACGTCATAGCAGTTACAGAGGTTCAGGTACCATTTTTCAGTGAACAGTTTCAAGTAAGAACCATCTC
TAATCTGTCAATTTTCCTCTTCACCTGCATAGTTTTGCTCGCTGCAGGAGCTTCTTTCTGCATGTGGAAGCACAGCTCCT
AAAAGTATCCATGAAGTTGTAGCGCATTTGGCTTCCCGCCTTGCTCGATGGGACGATAGGTGGTACTACTGAATTTTTAA
GAAGCACAACTACTCAGTGTTCTAGACATGTACTCCGTACATCTAGTAACCACTTACCAGTAGTGGAAATTTATATTTGA
GGCATCATATTTACATGACAGATTGTGGCGTAAATACGTGTTTGGTGCAGCCGATGAAATTGAACTTAAATTTGTAAACA
GGTAAGTTATATACTACAGTTTGATACCATTGGTTTCCACGAATCTCTTTCCTCTTTGGCTAGAACAACGTGACAGTATG
AGCATGCATGTGCAGGAGGAATCAGGAAGACCTAAACCTGCTGTGCATAATATTTAACCAAGACATTAGAAGGTTAGCCA
CCCAGGTATGTATATTCAGACTGAATAAGTTCATAGGAATATACGGTGGATATAGG----------------ACTGTATT
TTTGGGCAACATGGCCGG-----CCGGTAGAGCCTGTATGAGCTAATACCAGGTCTGAGCCAAGTTGTGCAGTTCGTTTG
GTTGCTCCCATTTCCTCTCCTGTCCTCACATTGGCCTAATAGAGCCTTTTTGCACTTGTTCGGACCTGCTTGGCTGGAAA
CCGCGGATTTGAAC-------------------------------------------------GTTTCTCTCTGTGGCCT
GGATTTGGGCCCCCAAAGCCTGCATGGCTGTTATGCTAGCAACCAAACACACCCATAATGAATC----------------
------------TGTTTGAACTAAATGCATTTTGTTTCGTCAATAGGTTATCAGGGTGAAATGGTCACTGCATGCTAGAG
AGGAGATAATATTTGAGCTGCTCCAGTATCTGAGGGGAACCGCCACCAGGTTCTTGCTTGAAGGTATCAGGAAAGACACA
AGGCAAATGATAGAAGAGCAAGAGGCTGTCCGCGGCCGGTTGTTCACCATCCAGGATGTGATGCAGAGCACTGTGCGTGC
CTGGTTGCAGGTAAATACTTTGGCAGACTCACTCTTG-GGGATCTGATTGGAATTTTTATATACTA--------------
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---------------------------------------------------------------GGAGTAATTGATAAGCG
ACAACATGAACCGCAGTTTGCTAACGAGTAAAAATAATAATAATAATTGTGGGTATGCTAACAAGTAG------------
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-------AGTAATATGACCGAGACCTGTACCTTTTCTAGGAGTATGATATATGCAAGTATGAGCTATAAACTCGATCGGT
TGTTGTGATACTCAGGATAAGAGCCTTCGCATCACGCATAACCTAACCATTTTTGGTGGGTGTGGCCTCATTCTGTCAAT
CATCACCGGATTGTTTGGGATCAACGTGGACGGCATCCCAGGAGCTAAAAACACTCCATATGCTTTTGCGTTGTTCTCCG
GGCTTCTGTTCCTGGTTGGGTTCATGCTGATCATTGTGGGAATCGTCTATTTCGGACTGCAGAAACCGGTCAGTGATGAG
CAGGTCCAAGTGAGAAAGTTGGAGCTCCAGCAGCTAGTCTCCATGTTCCAGCACGAGGCCGAGACACACGCCAAAGTGAG
AGAAGGAGTCCTGAGGAGCGACTTGCCTCCTAGAGCAGCTGATCTCATCTATGATAATGGTGATGCGTGTCTCCTTATAT
CCCCAGGCCCAGCATCTAAAATTGCAACGTTACTAATA---TATTTTTTGTTATCCATGCATATGCATCCATCAGTGCGT
AAGCTTGGAAGGTATTTCTCGTTCGAAGCAAAGTGTGAGCCAGCGCTTCAAGGTTATCACTTGGTTTCGCTTTGCACCCT
GTAGTAGCAACATGTGAGGTTAGCACATCCATCCACCAGACTCGGCTCTCACCATGCTGCAAAGTGACTTTGCTGATTTT
CCGTGATCCATGCAGGCCAAGAGAGCAGCCGCAAATGCGGTTGGTTCGTTGCAGCGTATAGACCGGTCCTGAAGAAACTC
CGCGAGCGTATTGCGGATCAGTTTTTCGTTTCAGG--------------------------------TCTACCATCGTCG
CATCTCTGTAAAGTCTACGTGTATGTGGTATCACAGGATACGGATGTAGTGTTCCTCGAGCACTGAT-----------AG
GTGCTATTCACGTGGCCAGAGCCCTCGATGTGATTGTTAACTTTACTTTCACATGGACAACG------------------
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----------------------------------------------------------------------ACAGTGAGGC
CGATGTAGCTACAACTTTCCAAGTGCTACTTCCAGGGTCAAAATGTTCAAATCTTTCTCTATAGTGTTTGTGGAGTCAGA
GCATCTACAGCAATAGTCCGTCTG------------------------------TAGTCCCACAAAACCGGATAAGGGAG
TACAAAGTTCTTTTTCAAGAGTTAAACCGGACCTAGCCAAACCTTAACCCGGTTTAACTAGTCGAAACTTCTACCCCTAG
CTTCTACAGTGGCTCAATCTCA-G-ATACAACACCCCTTCCCCACGCTTGCACTGCAT----------------------
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>chr3A_794
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------------------------------------------------------------------------------CA
CGTGTCGCGTCGGCTCCTTGCGCACCGCCTCCCAGCCCTCTGACACGCGTGCCCGACACGCCCAAAAAGACGATACATGT
GGCACCCGCTCCCCCGCTTCGCTTCCACTGCCCCCACATAACCGCTGACAAGGGCGACCGCTTCAAACTTGAAATATCCC
GTACATCGCCGCCGTTGCATTCGCAGGC---TGCTGCTGCTGCTGCTGATCGACACGATGGACGGCGAGCCCCGGTGGCA
CAACAGCTTCCCCGGCAACGTCAGGAAAGAGCTCATTCACAGTCTCGGCAGCTCCACCAAGGAAGCCTCGCCGCAGTCCG
ACCTGTGGACCGGAGGCCTCGTCTGCGCCTTCGAGTTCGTCCGCGGCCACGGCTTCGCTAGCCCGCCCAATCTCTCACGG
AACAACTCCTCGCAGTACTCCAAAGACCATTCAGCAGCCATGGATCCCACGAAGCTACCCATCACAAAGTTGGGAGACGT
TTCATCTCAAGGCAAGCTATACAACTTTCTTGGTTTGATTCCATTTCGCGGTAGAAAGCCCGGTTGGCTT------GACA
GATTGGCAGCCGGTAGGTTCGGAGGACGGCGAGGAGCCGAGGCCGGCGTGCAAGCACGGGAAGGCGTCGCCGGAGAGCTA
CTGGGTGCCCATCGGGTGGAGGAGGATAGCGGAGCTGGTGGAGATGGTGGAGGGGGACGCGGCGTGGGACGGGCAGGGGA
TGGGCGGCCTCATGGACGACGGCGACCAGTGCTGCGATATCACCGTGGCCGATGTCGCCGCGCCGTACTGGCAGAGGCCG
GCGGGGCCGACCTGGTGGTGCCACGTGACAGCGGGACACCCGGCGGTGGACGCCTGGCTTGCCGGCGCGCGATGGCTGCA
CCCGGCCATCCGCGTGGCGCTCAGGGACGAGAGCATGCTCATCAGTGAGAAGATGAAGCATCTACTGTATGAGGT----G
ACGGACTGAATTAACTGAATTCTTTGTGTGCCATCTCGATCTCGTGGACAAAATAATTCATGGTGACCCATG--------
--CCGCTCAGGTCCCGGTTAGAGTTGCAGGTGGTTTGCTGTTCGAGCTATTGGGCCAGTCCGTGGGCGATCCGGCCGGGG
ACGAAGATGACATTCCTATTGTGCTCCGTGCATGGCAAGCTCAAAATTTTCTTATAACAGCGCTTCATGTGAAAGGTTCT
GCGACCAACATTAACGTCATAGGGGTTACAGAGGTTCAGGTACCATTTCTCAGTGAACAGTTTCAAGTAAGAACCATCTC
TAATCTGTTAATTTTCCTCTTCACCTGCATAGTCTTGCTCGCTGCAGGAGCTTCTTTCTGCATGTGGAAGTACAGCTCCT
AAAAGTATCCATGAAGTTGTAGCGCATTTGGCTTCCCGCCTTGCTCGATGGGATGACAGGTGGTAT---TGAATTTTTAA
GAAGCACAACTACCCAGTGTTGTAACATCTAGTCAT--------------------------------------------
--CATCATACTTACCTGACAGATTGTGGCGCAAATACGTGTTTGGTGCAGCCGATGAAATTGAAGTTAAATTTGTAAACA
GGCAAGTTATATACT-----TTAATACCCTTGGTTTCAT-GAACCTCTTTCCTCTTTGGCTAGAACTATGTGACAGTATG
A----GCATGTTCAGGAGGAATCAAGAAGACCTAAACCTGCTGTGCATAATATTTAACCAAGACATTAGAAGGTTAGCCA
CTCAGGTATGTATATTCAGAATGAGTAAGTTCAG-------TACAGTGGATATAGGGCGTGTTTGGTTACTCACTGCATT
TTTGGGCTTCCTGGAAACCTGGCCCGGTAGAGCCTGTATGGGCTAATACGAGGTTTGAGCCGAGTTGTGTAGTTCGTTTG
GTTGCTCCCATACTGGTTCGGGC--------------------------------------------------CTGCAAA
CCGCCGATTTGAGGGCTCCTCCCGGGCCAGGCTGAGGGTTTGCTTTGAGGAGCGGACAGGCATGTTTCTCTTTGTGGACC
GGATTTGGCCGCCCAGAGCCTGCATGGCTGTTATGCTAGCAACCAAACACGCACATAATGAAT--ATGTATTTCTCAAAA
AAAAAAAGAATATGTTTGAACTGAATGCATTTTGTG-----AATAGGTTATCAGGGTGAAATGGTCACTGCATGCTAGAG
AGGAGATAATATTTGAGCTGCTCCAGTATCTGAGGGGAACCGCCACCAGGTTCTTGCTTGAAGGTATCAGGAAAGACACA
AGGCAAATGATAGAAGAGCAAGAGGCTGTCCGTGGCCGGTTGTTCACCATCCAGGATGTGATGCAGAGCACTGTGCGTGC
CTGGTTGCAGGTAAATACTTTGGCAGACTCACTCTTGTGGGATCTGATTGAAATTTTTATACTAGTCCCTCTGTTTCTAA
ATATAAGTCTTTTTAGAGATTTCAATACGTACAGACTACATACGGATGTATTTAGACATATTTTAGAGTAGAGATTCACT
CATTTTGCTTCGTATGTAGTCTCTATTGAAATCTCT-AAAAAGACTTATATTTAGGAACGGAGGGAGTAATTGATAAGCG
ACAACATGAACCGTAGTTTGCTAACAAG---------TAAAAAAATTTGAGGGTATGCTAACAAGTAATATATTTTTCTA
CGGTATATATATATATATATTAAAAAGTAAAGTATTTACATAAAGTACAAAAGATAAAGGAGAAAATAAGATCAACCTAT
GCTAACAAGTAATATGACCGAGACCTGTACCTTTTCTA------TGATATATGGAAGTATCAGCTATGAACTCGATCGGT
TGTTGTGATACTCAGGATAAGAGCCTTCGCATCACGCATAATTTGACCATTTTTGGTGGGTGTGGCCTCATTCTGTCAAT
CATCACCGGATTGTTTGGGATCAACGTGGACGGCATCCCAGGAGCTAAAAACACTCCATATGCTTTTGCATTGTTCTCCG
GGCTTCTGTTCCTGCTTGGGTTCATGCTGATCATCGTCGGAATCATCTATTTCGGCCTGCAGAAACCGGTCAGTGATGAG
CAGGTCCAAGTGAGGAAGTTGGAGCTCCAGCAGCTAGTCTCCATGTTCCAGCACGAGGCCGAGACACACGCTAAAGTGAG
AGAAGGAGTCCTGAGGAGCGACTTGCCTCCTAGAGCAGCTGATCTCATCTATGATAAAGGTGATGCATGTCTCCTTATAT
CCCCA------GCATCTAAATTTGCAACGTTACTACTAATATATTTTT-GTTTTC----C--ATGCATCCATCAGCGCGT
AAACTTGGAAGGTATTTTTCGTTTGAAGCAAAGTGTGAGCCAGCGCTTCAGGGTTACCACTTGGTTTCGCTTTGCACCCT
GTAGTGGCGAGATGTGAGGTTAGCACATCCATCCACCAGACTTTCAGCTCTCACCA-TGCAGAGTGACATTGCTGATTTT
CCTTGATCCATGCAGGTGAAGAGAGCAGCTGCAAATGCGGTTGGTTCGTTGCAGCGTGTAGACAAGTTCTGAAGAAACTC
CCA-AGCGTGTTGCAGATCAGTTTTCCTTTTCAAAGGGACGGCACACGGCAGCCTTTAAGACGAAGATCTACCATCGTCG
CATCTCTGTAAAGTCTACGTGTGTGTGGTACCACTAGCTACGGATGTAGTGTTTCCTCGAGCAATCACTCTCATGATCAG
GTGATATTCACGTGGCCAGAGCCCTCGATGTGATTCTTAGCTTTACTTTGACATGGACAGCAAAACAGGGAGGCCAATGT
TTTTTTTTTTTGACAAGGGGGGTATTCCCTCGGCCTCGCGGCCATCTTCTTAAAAGTGCCAATCAAAACAAAGTCTGACA
TCCAGTACGGTTCTCAGAAAGAGCACAAAGGGAGAAAAAAAAGGCCATAACCGGCGAAAAACATGACAAGAAACTCCTAT
CCTATTATTGGAATGTCTCCTAGCGATTGTACCCAATAACCAAAAGCTCCCTAGAAAGAGCACAAAGGGAGAAAAAAAGG
CCACAACCGGCGAAAAACATGACAAG-------AAACTTCTATCCTATTATTGAAACGTCTCCTAA--------------
---------------------TGATTGCACCCAATAACCAAAAGCTCCATGTAGTCCTTACTGTCTTCCAACAGTGAGGC
CGATGTAGCTGCAACTTTCCAAGTGCCACTTCCTGTCTCGAAATGTTCAAATGTTTCTCTATAGTG---GTGGAGTCAGA
GCAACTATAGCAATAGTCCCTCAAAACCGGGTGGAGTCAAAGCAACTATAGCAATAGTCCCTCAAAACCGGGTAAGGGAG
TGCAAAATTCGTTTTCAAGTGTTAAACCGGACCTAGCCAAACCTTAATCCGGTTTAACTAGTTGAAACTTTTACTCCTAG
CTTCTACCGTGGCTTAATCTCA-GGATATATCACCCCTTCCCTGCGCTTGCACCGCATCGACGTCCGCGCCGCCAAAATC
CACCATAGCACTTGCCCTCCCGCGCCTGGCACTTCCAATCAACCGGTGCCGCCCTCGACTCCCTCGAAATGGTAGGATTT
AGCCATC-----
>SNPs
S------------------S-SS-S---S---------S--SS------------------------S------------
----------------------------S-----------SS--S----------------S------------------
-----SS-S--S-------S--------S------S----------S---S-----------------SS---S---S--
--------------S------S---S--S------S----------S---S----S---S--S-------------SS--
---S---------------S--------S---------S---S----SSS----S---------S-S-S-----------
------S-----------SSS-----------S-----S-------S---S----S--------S-----S---------
----------S--------S--------------S--S------S----------------------SSSSSS-------
------------------------------------------------------------------------------S-
----SS-S----SSS-SS---SSSSSS-SSS-----------S--S----------S-SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS---------------------------------------S----SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------S-------------S---------
-----------------------------------------------------S--------------------------
--------------------SSS-----------------------------S---------------------------
------------------------S-------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------S--------------------------------------------S-----------S--------S-----
---S----------S-----------------------------------------------------------------
-----------------------------------------------S-----------S--------------------
-----S---S--------------------------------------------------------------S-----S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
------------------------------------------S-----------------------------SSSSSSSS
SS-------------S--------------S-------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-----------------------------------S------------------------
---------------------------------------------------------------SS---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S-----S------SS-------
--S--------------------S-------------------S-------------------------SS---------
-S---S---S----------S---------------S-------------------------------------------
-----------------------------------------------------------------------SSS-S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
-----------S--S-----------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
------------------S-----------------------S-------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
---------------SSSSSS-SSS-------------------------------------------------------
----------------S------------S--------------------------------------------------
---------------------------------S-----------------------------S-----------S----
-----S--S-SS-SSS--SSSSSS-S------------------------------------------------------
------S-S-S----S---S-S----------------------------------------------------------
--------------------------------------------------------------------------------
-S----S----S-----SSSSSSS-SSSSSSSS---S-S----S---------S-S----SS----SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS--S------S--------------------------S---S----S------S------
--------------------------------------------------------------------------------
S-----------------------------------------------------------------------------S-
----------------------------------------------------S------SS-------------------
----------------------S---------------------------S---S-------------------------
--S---------S--------SS----------------S-----------------------S--------S-------
----S--SSSSS
>forward_826
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------GTCCCACGAAGCACCTACAA------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1830
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---------------------------------------------------------------------CGAGGTGACGG
CCTGAATTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>forward_1334
--------------------------------------------------------------------------------
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----------------------------------CAGCCATGGATCCCACGAAA--------------------------
--------------------------------------------------------------------------------
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------------
>reverse_3431
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TAGATTCACT
CGTTTCGCTCCG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------
>forward_2273
--------------------------------------------------------------------------------
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-------------AAGTTGTAGCGCATTTGGCC-----------------------------------------------
--------------------------------------------------------------------------------
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------------
>reverse_4135
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------------------------------------------------------CAATGGTGATGCGTGTCTCC------
--------------------------------------------------------------------------------
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------------
>forward_3932
--------------------------------------------------------------------------------
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------------------------------------------------------------------------GTTCTCCG
GGCTTCTGTTCG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------
>reverse_4816
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---------------GGAAGGTGCACAAAGGGAGA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------
