>input_sequence_25956
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----ATGGAGACGTCGACCGTCACCTACTCCTCCTCCTCGCCGCCCCCTTCCTCCTCGCCGCC---GCAGCAGGCCGAGC
AGGCCGCCGACCTCGACGCCGTCAGCCTCGGCCGCCTCAGCGCCAACCTCGAGCGCCTCCTCGACCCGGCCTTCCTCAGC
TGCGCGGACGCCGACGTGGTCCTCGCG---------GACGA---CGCCGGCGTCGTCGGCGTCCACCGCTGCATCCTCGC
CGCTAGGAGCGGCTTCTTCCTCGACCACTTCTCCAATAGGCTCGCCAACCC---CGCCGCCGGCGAGA------AGGAGA
AGGAGAAGGAGAGGCCGCGGCTGGAGCTCGCGGAGCTGGTCCCGGGCGGGCGCCACATCGGCCGCGACGCCCTCGTCGCC
GTCCTTGGGTACCTCTACACCGGCCGCCTCAAGCCGCCGCCGCGGGACTCCGCGGTGTGCGTGGACGAGCGGTGCCCGCA
CGAGGCCTGCCGCCCGGCGATGGACTTCGTGGTGGAGTCCACCTACGCCGCCTCCGGCTTCCAGATCTCCGAGCTCGTCT
CGCTCTTCCAGGTAATAATAATCAGCAACAGATACTACCTCTGACAAGCTG-----AACAACACATAC--ATATACACCT
GACGATGCATTGCTACAGTTATGTCAGGAATGAAATACAAATACTGCAAATTGTTCATCATTTCTGGTGAAAGAAAAGAA
ATTTGTTGATCAGTGAATCACCCAAATGTGAAGA-------------------------------ATTTTGATTTTGCAG
CGTCGTCTGTCCGACTTTGTAAACATAGCTCTGGTGGAGGACATAGTGCCCATCGTTCACGTTGCGTCCACCTGCCAGCT
CCATGAGCTGCTCAGCCAGTGCATTCAAAGGATTGCAGGATCGAATGTCGACAGCCGGTACCTCGAGAAGGAGCTTCCAG
ACGAGGCATTTGCCAAGGTCAAGGAGTTCCGGCGATACTCGCTGCACGACGATTCGGACGAGTTCATCCTGGACCCTGAG
CACGCCAAGAAGGTCAGGAACATCCACAAGGCCCTGGACTGTGACGACGTCGACCTGGTCGGCCTGCTCCTGCAAGAGTC
TGCGATCACCTTGGACGATGCATTGGCCATACACTATGCCGCCGCCTATTGCGAGCCCAAAGTGCTAGCTTTGCTCTTGA
AGCTGGACCCTGCCGGTGACTGCGTAAACGTCAACCTGAAGAATGACAGTGGGTACACACCATTGCATTTGGCTTGCATG
AGGCGGGAGCCGCAGATCCTTCTCTCGCTTATCGAGAAGGGCGCGTCCGTGGTGGAGAGGACGCACGATGGGCGCGACGC
GCTTACCATCTGCAAGAGACTGACAACAGAGAAAGACTGCAACAAGAAGCTTGAGAAATGCAAGGAGAGAAGCAAGGCTT
ACTTGTGCATTGACATCCTTGAGCAGGAGATCAAGAGGAAATCCTTCATCTTCGAGGAGCTCCTTTCGGCAGAGGTTTCG
GTCGCCACACCTTTGCTGGTTGACAATTTCCACATGAGGCTCATAAACTTGGAAAACAGAGGTTTGCACATTTTACTTTG
GTTTAATATATATTTTGTAGTTGGACTTCTCAGTAAGACCATAGTGAGGTGTATTTGCGCTTGTGATGTTTTAATATATG
ATCTCATGGTAG-------AGAGAGTTTTGACAATTCGGTGCTCTTTTCCTTCTCTTGAATTTAGAAGCACAGGTTTCTG
ACAGGCTTAGTTTTTTCTTAGT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AGTATTTGCTATTTGTGATAGCGATACGCTCC----------
----------------------------------------AGTTACTTGCTATGTTGTGTAGCACAAAAGGAGGAAATCT
AATACTGAAAGCAGTATCAGCAGAGTTATACTGCTGTTACCTTTTCTTTTCCTAGCTAGAAAGAAGCATACAGTGCTTAA
AATCATTGCTAAAAAATATTTGTGT-GTGTCTATGCAGTTGCCTTTGCAAGAATATTCTTCCCTTCTGAAGCCAAGCTTG
TCATGCGTATAGCACAAGCAGATTCAACCGAAGAGTTTGCCGGTCTCACGTCAGCTAATTTCAGTAAACTGAAGGAGGTT
GACCTAAATGAGACCCCTACAATGCAGAACAGGAGACTGCGGGAACGCCTTGATGCCTTGACAAAGACAGGTGATTTAAA
CATAATCATGCATCTGTTATAAAATGGGTATTGCT-TCAGCATTTCTCCTTGCTAATAGATTTACGAATCTTCGAGCAAA
AATTGGCTAGTTTAAGGAGCTCCAAATATTTTTACTCGTGAATACAATTTTGAAGTATAACGAAGAATACATTAACAGC-
--------------------------------------------------------------------------------
------------------------CCAAGGTATCGTCATGTACCATTTACAGGATAGTTCAATCTAGTAGGATAGGAACT
AACTAAAGGGCAGATTAGATTGCCGTG--GGTATGCGATGATGGCTTTCATGACCTAGCATACAAGATTTGATTTGGCTT
AGGTTCTGATCAACGAAAACGCGTTTGCTTGAACTAACCGATATGT----GGTCTTCAATTTTGCTTTTACATTAAATTT
TCTTT-ACCATACGTCCCCTCAACTTACATTACCTGTTTTGCTTTAAGATACAGAACCTATTTGCAAATAGGAGACTTAT
GCAAACCCCTTA----TAAACTCTTCCAGTACTCTTCTTTATGGATAAA---TGTGTCACATGGTAACTGGTG-------
----------------------CTATGTAGTCTGTATTTTTTTTTATTAAATAAACTTGTGTTTCTGTTTCAGTTGAGCT
AGGGCGAAAGTACTTCCCGCATTGTTCGGATGTTCTCGACAAGTTCCTCATGGAAGAATCCACCGATCTGCACTTCCTTG
AAAGCGGCAGTGCTGAGGACCAGTACACCAGGAGGACGCGCTTCTCTGAGCTCAAAGAGGATGTGAGGAAGGCCTTCAGC
AAAGACAAGGCCGTTGCAGCCATAGCCTCATCGACGTCCTCGTCTTCGCCGAGGGGTGATGGAAAGGTTAGTAGACATGG
TCACAAGAAGGCGAGGCTGTCGCGGTGA----------------------------------------------------
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>chr4D_1_TraesCS4D01G017500
ACATGTGCAGTGCAGGTGCAAAGA---------AGAGGTTCTAGAACATGTCCAGCCAGCTAGCCAGCCAGCCAGCAATC
ACCCGTCAAGTCGTCGTCCAGGTCGTCGCTT------CCGCCGGTACACACACACACACACAGTGCCGACTTGGGCCTCG
CTCCGATCCCCGCGGTGATTTTCTCGGACTAGAGTATTCCTTCCTCC-----------CACGACTA--------------
-TTCTCCCGGCGACGTCAC---CGCGGTGACGTCCGGTAAGCCGGTCACCGCCCCCGACGGGCCGTGACCCCATCACACC
CCTCACCTCACGCGCACCACCCAAGCAAATCCCGCACGTTCCTGC-------------GTGTGTGGTATCTCGCAGAAGC
AGCCAAGAGAAGT---------GAGGAGGGGACTAAAAATAATCACGGCGCGCGCCGCGGATAATCCTTTTCCGGGCAGC
CAGCCGCGAAATTTCC----CGATAAGAGCAGCCGCGGGCGGCGCTTCCGCGTTTGGTTCGCCA----CACTTGCTTGCA
GATTAG-------------CCGCTGCGGCTTCCCCTTCTCGACCAACTCCAAAATCCGC--GGCGTGCGTACCGGCCGTT
CCGTTCCAGCTTCTTGTGCCTGTTGTGGCAAGAAGAAATCCGCGCTGTTTGGGGCCTCGTTTGAGCAGGAGTATCCTCGC
TTTTTCCTGTTGGGAGTTCCTGCTTGCTGCTCTGCCCTTTCGTCGGGTTTCTTGGAAGAGATTCATGCTTCCTTCGTGAC
ATCTTGTCATCTTTTT--TGCTTGATTTGCATGGTTTTCTTGGGTTCTTGCCGGAGGATTTGCCCCTT-TTAGAGCTCGG
ATTCCTCCGCAAGATCCACCACTTCCGCAATCATTTGAGCTCGTGCGG---------------TTCAATCGTGGGAGCAT
GGGACAAAAGCTTCTTCCGTCCTTGGGGACAAAGGCTTGT---GCTCGGATTTGACACCATGCCAAG------CATCATC
AAGTAGACGCGAGCGAGCTTCTAGAACCTTCTGC---TAGCTTCCTCCTGCCCA---CT--CCCCGTCCACGCGACATAC
ATACATGGAGACGTCGACCGTCACCTACTCCTCCTCCTCGCCGCCCCCTTCCTCCTCGCCGCC---GCAGCAGGCCGAGC
AGGCCGCCGACCTCGACGCCGTCAGCCTCGGCCGCCTCAGCGCCAACCTCGAGCGCCTCCTCGACCCGGCCTTCCTCAGC
TGCGCGGACGCCGACGTGGTCCTCGCG---------GACGA---CGCCGGCGTCGTCGGCGTCCACCGCTGCATCCTCGC
CGCTAGGAGCGGCTTCTTCCTCGACCACTTCTCCAATAGGCTCGCCAACCC---CGCCGCCGGCGAGA------AGGAGA
AGGAGAAGGAGAGGCCGCGGCTGGAGCTCGCGGAGCTGGTCCCGGGCGGGCGCCACATCGGCCGCGACGCCCTCGTCGCC
GTCCTTGGGTACCTCTACACCGGCCGCCTCAAGCCGCCGCCGCGGGACTCCGCGGTGTGCGTGGACGAGCGGTGCCCGCA
CGAGGCCTGCCGCCCGGCGATGGACTTCGTGGTGGAGTCCACCTACGCCGCCTCCGGCTTCCAGATCTCCGAGCTCGTCT
CGCTCTTCCAGGTAATAATAATCAGCAACAGATACTACCTCTGACAAGCTG-----AACAACACATAC--ATATACACCT
GACGATGCATTGCTACAGTTATGTCAGGAATGAAATACAAATACTGCAAATTGTTCATCATTTCTGGTGAAAGAAAAGAA
ATTTGTTGATCAGTGAATCACCCAAATGTGAAGA-------------------------------ATTTTGATTTTGCAG
CGTCGTCTGTCCGACTTTGTAAACATAGCTCTGGTGGAGGACATAGTGCCCATCGTTCACGTTGCGTCCACCTGCCAGCT
CCATGAGCTGCTCAGCCAGTGCATTCAAAGGATTGCAGGATCGAATGTCGACAGCCGGTACCTCGAGAAGGAGCTTCCAG
ACGAGGCATTTGCCAAGGTCAAGGAGTTCCGGCGATACTCGCTGCACGACGATTCGGACGAGTTCATCCTGGACCCTGAG
CACGCCAAGAAGGTCAGGAACATCCACAAGGCCCTGGACTGTGACGACGTCGACCTGGTCGGCCTGCTCCTGCAAGAGTC
TGCGATCACCTTGGACGATGCATTGGCCATACACTATGCCGCCGCCTATTGCGAGCCCAAAGTGCTAGCTTTGCTCTTGA
AGCTGGACCCTGCCGGTGACTGCGTAAACGTCAACCTGAAGAATGACAGTGGGTACACACCATTGCATTTGGCTTGCATG
AGGCGGGAGCCGCAGATCCTTCTCTCGCTTATCGAGAAGGGCGCGTCCGTGGTGGAGAGGACGCACGATGGGCGCGACGC
GCTTACCATCTGCAAGAGACTGACAACAGAGAAAGACTGCAACAAGAAGCTTGAGAAATGCAAGGAGAGAAGCAAGGCTT
ACTTGTGCATTGACATCCTTGAGCAGGAGATCAAGAGGAAATCCTTCATCTTCGAGGAGCTCCTTTCGGCAGAGGTTTCG
GTCGCCACACCTTTGCTGGTTGACAATTTCCACATGAGGCTCATAAACTTGGAAAACAGAGGTTTGCACATTTTACTTTG
GTTTAATATATATTTTGTAGTTGGACTTCTCAGTAAGACCATAGTGAGGTGTATTTGCGCTTGTGATGTTTTAATATATG
ATCTCATGGTAG-------AGAGAGTTTTGACAATTCGGTGCTCTTTTCCTTCTCTTGAATTTAGAAGCACAGGTTTCTG
ACAGGCTTAGTTTTTTCTTAGT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AGTATTTGCTATTTGTGATAGCGATACGCTCC----------
----------------------------------------AGTTACTTGCTATGTTGTGTAGCACAAAAGGAGGAAATCT
AATACTGAAAGCAGTATCAGCAGAGTTATACTGCTGTTACCTTTTCTTTTCCTAGCTAGAAAGAAGCATACAGTGCTTAA
AATCATTGCTAAAAAATATTTGTGT-GTGTCTATGCAGTTGCCTTTGCAAGAATATTCTTCCCTTCTGAAGCCAAGCTTG
TCATGCGTATAGCACAAGCAGATTCAACCGAAGAGTTTGCCGGTCTCACGTCAGCTAATTTCAGTAAACTGAAGGAGGTT
GACCTAAATGAGACCCCTACAATGCAGAACAGGAGACTGCGGGAACGCCTTGATGCCTTGACAAAGACAGGTGATTTAAA
CATAATCATGCATCTGTTATAAAATGGGTATTGCT-TCAGCATTTCTCCTTGCTAATAGATTTACGAATCTTCGAGCAAA
AATTGGCTAGTTTAAGGAGCTCCAAATATTTTTACTCGTGAATACAATTTTGAAGTATAACGAAGAATACATTAACAGC-
--------------------------------------------------------------------------------
------------------------CCAAGGTATCGTCATGTACCATTTACAGGATAGTTCAATCTAGTAGGATAGGAACT
AACTAAAGGGCAGATTAGATTGCCGTG--GGTATGCGATGATGGCTTTCATGACCTAGCATACAAGATTTGATTTGGCTT
AGGTTCTGATCAACGAAAACGCGTTTGCTTGAACTAACCGATATGT----GGTCTTCAATTTTGCTTTTACATTAAATTT
TCTTT-ACCATACGTCCCCTCAACTTACATTACCTGTTTTGCTTTAAGATACAGAACCTATTTGCAAATAGGAGACTTAT
GCAAACCCCTTA----TAAACTCTTCCAGTACTCTTCTTTATGGATAAA---TGTGTCACATGGTAACTGGTG-------
----------------------CTATGTAGTCTGTATTTTTTTTTATTAAATAAACTTGTGTTTCTGTTTCAGTTGAGCT
AGGGCGAAAGTACTTCCCGCATTGTTCGGATGTTCTCGACAAGTTCCTCATGGAAGAATCCACCGATCTGCACTTCCTTG
AAAGCGGCAGTGCTGAGGACCAGTACACCAGGAGGACGCGCTTCTCTGAGCTCAAAGAGGATGTGAGGAAGGCCTTCAGC
AAAGACAAGGCCGTTGCAGCCATAGCCTCATCGACGTCCTCGTCTTCGCCGAGGGGTGATGGAAAGGTTAGTAGACATGG
TCACAAGAAGGCGAGGCTGTCGCGGTGATATGTATGCTCGATGTCGCCAAGTC--GGTAGGTTAACGACGGATCCGTCGA
GCGCAGGCGCGTGATGGCTTCGGAGAGGTGGGGTGGGGGGAAGCTAGCAA--GGTTTTGTTGACAGTTTGTAGTGCAGTG
AAACCATGTATGTAGATGTATGTAACCAAGCAAGCATATCGGTTCTAGTTTGTTTGTTGCTTGGTGCATTTCTTGTAGTT
TACTGTGGTTTGACATGTGACAGGCTTCAGTAGATGATTTTTAATCGCCGGTGACC-GCTCTTCACAGTCATTGTATCCA
TCTTGCATGCTCAGGCCTCTTGGTAGGATCAAACTGATTTTGAAGGTTCGTTTGAAGGTTCAGGCATGATGAATATGCAT
GGA-------------------CTGCTAATCTTGAGAACGCCAGGGATTTGTGCATAAACATGAAACATCAACAGTAGTG
TTGGTGATCGAAAACACGCACACCCATGCAGATAGTGAATTCGATCAAAGAAAAACTAGGAAAAAATTAAAAAAAATGGA
TTTTTGGTACATCAAACATTTGTCGACCATTCTACTCATGCACGATGTTTTTGTGAGGAATGACACCCTAGTGAAGTGGA
ATGACACCCTAGTGAAATAAATACAATCCCACCCTACTATTCCTTGAAACAATATTTTCGAATGTAGCTTTGATTTTGTC
ATTTTTTTTTGCTGGAATATCAAGGGTGTCGTTTCTTTGTGAAACTTTATATGCTACTCCCTCCGTCCCAAAATATAAGA
ACGTCTTTCATACTAGTTTAGTATGAAAAACGTTGTTATATTTGGGACAGAGGGAGTAGTATACAAGTCAGCCATGTATG
TTATGGGAAAGAAATCAGATTTTATTATTTATTTTTTCTATTTTTCTTTTCTTTTCAATTTTGGTATTCCCAAGGAGTTT
CCATGGAACCATGTTCCAA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------AAATCCGCATCCCATCAGAGATGCTCTTGAAAAGGTCATGCGACCATT
GAAATATTGGTCTCTGCCCTAAAAT
>chr4B_2
-CATGTGCAGTGCAGGTGCAAAGGGAAGGGCGGAGAGATTCTAGAACGTGTCCACTCATC-AGCCAGCCAGCCAGCAATC
ACCCGTCAAGTCGTCGTCCAGGTCGTCGCTT------CCGCCGGTACACACTCT----------GCCGACCTCGGCCACG
CT------CCCGCAGTGATTTTCTGGGACTAGAGTATTCCGGCCTTCCTCCCACACCACACGACTA--------------
-TTCTCCCGGCGACGACGTCATCGCGGTGACGTCCGGTAAGCCGGTCACCGCCCCCGACAGGCCCTCACCT-----CAC-
-----CCCCACGCGCACCACTCAAGCAAATCCCGCACGTCCCGTCGCTATTCTAC-----GTGTGGTATCTCGCAGAAGC
AGCCAAGAGAGAGAGGAAAGAGGAAGAGGGGGCTAAAAATAAGCACGGCGCGCGCCGCGGATAATCCTTTTCCGGCGAAA
TTTCC-------TTCC----CGATAAGAGCAGCCGCGGGCGGCGCTTCCGCGTTCGGTTCGCCAACACTTCCTCCGTGCA
GATTTCCGGTAGCCGCCGCCGGCCGCCGCTTCCCCTTCTCGCCTAACTTCCAAAACCCGCGGGCGTGCGTACCGGCCGTC
CCGTTCCGGCTTCTTGTGTTCC----GGCAAGAACAAATCCGCGCTTTCTCCTGTTGGGAC-------------------
---------TTGGGAGTTGCCGCTTGCTGCTCTGTTCTTGGGTTGGTTT-CTTGGGAGAGATTCACGGTTCCTTCGTGGC
ATCTTGTCATCTTTTTTTGCTTGATC-CGCATGGTTTTCTTGGGTTCTTGCGGGAGGATTTGCCCCTTTTTAGAGC-CGG
ATTCCTCGGCAAGATCCGCTACTTCCGCAATCATTTGAGCTCGTGCGGGAGGCTCTGTTTCTGTTCAATCGACGGAGCAT
GAGACAAAAGATTC---CGTCCTTGGG-------------------------------------GCCAAGCATCATCATC
AAGTAGACGCGACCGAGCTTCTAGAACCTTCTCGTAGTAGTTCCCCCTCTGCCCCCCCT--CCCCGTCCACGCTACATAC
ATACATGGAGACGTCGACTGTCACCTACTCCTCCTCCTCCCCGCCCCCTTCCTCGTCGCCGCCGCAGCAGCAGGCCGAGC
AGGCCGCCGACCTCGACGCCGTCAGCCTAGGCCGCCTCAGCGCCAACCTCGAGCGCCTCCTCGACCCGGCCTTCCTCAGC
TGCGCGGACGCCGACGTGGTCCTCGCG---------GACGACGCCGCCGCCGTCGTCGGCGTCCACCGCTGCATCCTCGC
CGCCAGGAGCAGCTTCTTCCTCGACCACTTCTCCAACAAGCTCCCCGACCCCGCCGCCGCCGGCGAGAAGGAGAAGGAGA
AGGAGAAGGAGAGGCCGCGGCTGGAGCTCGCGGAGCTGGTCCCGGGCGGGCGCCACATCGGCCGCGACGCCCTCGTCGCC
GTCCTCGGGTACCTGTACACCGGCCGCCTCAAGCCGCCGCCGCGGGACTCCGCGGTGTGCGTGGACGAGCGGTGCCCGCA
CGAGGCCTGCCGCCCGGCGATAGACTTCGTGGTCGAGTCCACCTACGCCGCCGCCGGCTTCCAGATCTCCGAGCTCGTCT
CGCTCTTCCAGGT--------------------ACTACCTCTGACTACCTGCACAACACAACACATACATATGTACACCT
GACGATGCATTGCTACAGTTATGTCAGGAATGAAATACAAATACTGCAAATTGTTCATCATTTCTGCTGAAAGAAAAGAC
ATTTGTTGATCAGTGAATCACCCACCCAAATGTGAAATGTTGCAACCAAGCTGTGTCTGATTTTGATTTTGATTTTGCAG
CGCCGGCTGTCCGACTTTGTGAGCATAGCTCTGGTGGAGGACATAGTGCCCATTGTTCATGTGGCTTCCACCTGCCAGCT
CCACGAGCTGCTCAGCCAGTGCATCCAGCGGGTGGCAGGATCCAGCGTCGACAGCCGGTACCTCGAGAAGGAGCTGCCAG
ACGAGGCATTTGCCAAGGTGAAGGAGTACCGGCGGTACTCGCTGCACGACGATTCCGACGAGTTCATCCTGGACCCCGAG
CACGCCAAGAAGGTGAGGAACATCCACAAGGCCCTGGACTGTGACGACGTCGACCTAGTTGGCTTACTATTACAAGAGTC
TGCCATCACCTTGGACGATGCATTAGCCATACACTATGCTGCTGCATATTGTGAGCCCAAGGTGCTGGCCTTGCTCTTGA
AGCTGGACCCTGCCGGGGACTGCGTAAACGTCAACCTGAAGAATGACAGCGGGTACACGCCGCTGCATTTGGCGTGCATG
AGGCGGGAGCCGCAGATCCTTCTCTCGCTTATCGAGAAGGGCGCGTCCGTGGTGGAGAGGACGCACGACGGCCGCGACGC
GCTCACCATCTGCAAGAGGCTGACAACAGAGAAAGACTGCAACAAGAAGCTGGAGAAATGCAAGGAGAGGAGCAAGGCTT
ACCTGTGCATTGACATCTTGGAGCAGGAAATCAAGAGGAAGTCATTCATCTTTGAGGAGCTCCTTTCGGCGGAGGTTTCG
GTTGCCACACCTTTGCTGGTAGACAATTTCCACATGAGGCTCATAAACTTGGAAAATAGAGGTTTGCACATTTTACTTTG
GTTTAATATATATTTTGTAGTTGGAACTCTCAGTAAGACCATAGTGAGGTGTATTTGTGCTTGTGATGTTTTAATATGTG
ATCTCATGGTAGGGG-------GAGTTTTGAGAATTCGGTGCTCTTTTCCTTCTGCTGAGTTTAGAAGCACAATTTCCTG
ACAGGCTTAGTTTTTTGTTGCACTGGGTTCTCAATATGCCCTGTTAGCTGAAACTCTCTCTGCTATTCTCTTCAAATATC
AGAGAGAGTTTTCTGAACTATCTGATAGGTTTCAGTAGCCTTTTGCTGTTAGGTTTTGGCTGCTTTGGTGGTCGGTGGCT
GGCAGTGCGGAGGTAGCTGGTGCTGTTTCAGGCTTGGCCATGCATCGTTTTATCATCCCCCCTTCGCGGGGTCTGGTTTC
ATTTAGTAATTTGTAAGACAATGTGGTTTCTGATGTATAGAGTTAGTTGATATGTTATGTAGCACAGGAGGAGGAAATCT
AATACTGAATGCAGTATCAGTGGAGTTATGCTGCTGTTTCCTTTTCTTTTCCCAGCTAGAAACAAGCATAGAATTATTAT
AATCATTGCTAAAATAAATTTTGCGCGTGTCTATGCAGTTGCCTTTGCAAGAATATTCTTCCCTTCCGAAGCTAAGCTTG
TCATGCGCATAGCACAGGCTGACTCAACCGAAGAGTTTGCCGGTCTCACGTCAGCTAATTTCAATAAACTGAAGGAGGTT
GACCTAAATGAGACCCCTACAATGCAGAACAGGAGACTGCGTGAACGCCTCGATGCCTTGACAAAGACAGGTGATTTTA-
CATAATCATG-ATGTGTAACAAAATGGGAAATGCTTTCAGTATTTCTCTTTGCTAATAGATTTGTGAATCTTCGAGCGAA
AAATGGATAAATATATGTTTGCTTACACAACTTATAGATATCTGGTCTTCTAGCTAAT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AGATTTGATTTGGCTC
AGGTTGTGTTCAACAAAACCGTGTTTGCTTGAACTAATAGATATTT----GGTCTTCAATCTTTGCTTTACACAAACTAT
T-----------TGTCCCCTCAACTTACATTATACATTTTTTGCT----TACACAAACTATTTGC---------------
-----------------AAACTCTTCCAGTACTCTTCTTTTATGGATAAATATATGTCACTGGTCTTTAGCTGGTTATTA
AGCTCACAGAGTAACTTGCTATCTGTGTAGTCTGTACTATTTTGTATTAAATAAGCTTGTCTTTCTGTTTCAGTTGAGCT
AGGGCGAAAGTACTTCCCGCATTGTTCGGATGTTCTCGACAAGTTCCTCATGGAAGAATCCACCGATCTGCACTTCCTCG
AAAGCGGCAGTGCCGAGGACCAGTACACCAGGAGGACGCGCTTCTCTGAACTCAAAGAGGATGTGAGGAAGGCCTTCAGC
AAAGACAAGGCCGTCGCAGCCATAGCCTCGTCGACGTCCTCGTCTTCACCAAGGGGTGATGGAAAGGTCAGTAGGCATGG
TCACAAGAAGGCGAGGCTGTCGCGGTGATACGTGTGCTCGATGCCGCCATGTCCCGGTAGGCTGACGCCGGATCCGTCGA
GCG-----GT--------TTCGGAGAGGTGGGGCGGGGGGGAAGCTAGCAAGGGTTTTGTTGACAGTTTGTAGTGCAGTG
GAGCCATGTATGTAGATGTATGTAACCAAGCAAGCACATCGGTTCTAGCTTGATTGTTGCTTGGTGCATTTCTTGTAGTT
TGCTGTGGTTTGACATGTGGCGGGCTTCAGTAGATGATTTTCGATCGCCGGAGGGCCACTCTTCACAGTGATTCTATCCA
TCTTGCATGCTCAGGCCTGTTGGTAGTATCAACTGATTC-------------TGAAGGTTCAGTCATGATGAATATGCAT
GGA-------------------CT----------------CCAGGGATTTGTGCACAGACATGAAACATCAATAGCAGTG
TTGGAGGTCGAAAACACGCACACCCGCGCGGATAGTGAATTCGATCAAAGAAAAACTAGGAAAAATAATGAAATAATGAA
ATCTTGGTACATCAAAC-TTTGTCGACCATTCTACTCATGTATGAAGTTGAAGTTGA--------------------GGA
ATGACACCCTAGTGAAATAAATACGATCCGACCCTACTATTCCTTCAAACAATGTTTTCGAATATAGATTTGATATTTTC
AAAAAAAAAA-CTAGAATATCAAGGGTGTCATTTATTTGTGGAACTTTATGTGCTAGC----------------------
-----------------------------------------------------------TATACCAATCGGCCATGTATG
TTATGGAAAAAAAATCAGGTTTTATTATTTACTTTTTCTGGTTTTGC---CTTTTCAAATTTGCTATTCGTGAGGAGTAT
CCATGAACAGTTTGTCTAATACACATCTAGATGTTTTCTAAAGATGTCACAACTAAGCTCCCACGAATAACACAGCAACA
AGGAAAAAAAAGCTGAGACAAAAATAAATAAACCATAAATATAGTGGACATCAAATTAGATGTGACATCTAGATGTGTTC
TAGACAGACCCATCCATGAAATCATGTTCCACAAATCCGCGTCCCATCAGAGATGCTCTTGAAAAGGTCAT-----CATT
GAAATAGTGGTCTCTGC--------
>chr4A_59
-------------------------------------------------------------------CCAGCCAGCAATC
ACCCGTCAAGTCGTCGTCCAGGTCGTCGCTTCCGCCACCGCCGGTACACACTCTCCTC-----TGCCGACCTCGGCCTCG
CTCCGATCCCCGCAGTGATTTTCCGGGACTAGAGTATTCCTTCCTCC-----------CGCACGAGACACGACTATTCTC
CTTCTCCCGGCGACGTCAC---CGCGGTGACGTCCGGTAAGCCGGTCACCGCCCCCGACGGGCCGTGACCCCATCACAC-
-----CCTCACGCGCACCACTCAAGCAAATCCCGCACGTTCCTGTCCCTATTCTAGGTGTGTGTGGTATCTCGCGGAAGC
AGCCAAGAGAGAGGAG---GAGGAAGAGGGGGCTAAAAATAAGCACGGCGCGC--CGTGGATAATCCTTTTCCGGGCAGC
CAGCCGCGAAATTTCCTTCCCGATAAGAGCAGACGCGGGCGGCGCTTCCGCGTTTGGTTCGCCCCACCCACTTCCTCGCA
GATTTCCGGTACCTGCCGCCGGCCGCCGCCTCCCCTTCTCGTCTACCTTCCAAAGTCCGCGTGCGTGTGTGCCGGCCGTT
CCGTCCCAGCTTCTTGTGCCTCTTGTGGCAGGAACAAAATCCGCGAGTTTCCTCCTGCTTGCCTGGGG------------
------------------------------------------------TTCTTGGGAGAGATTCATGCTCCCTTCGTGAC
ATCTTGCCATCTTTTTTTTGCTCGATTCGCATGGTTTTCTTGGGTTCTTGCCGGAGGATTTGCCCCTT-TTAGAAC-CGG
ATTCCTCCGTAAGATCCGGC---TCCGCAATCATTTGAGCTCGTGCGGGAGGCTCTGTTTCTGCTCAGTCGTCGGAGCAT
GGGACAAAAGCTTC---CGTCCTTCTGGTGGGTTCCTCCGGGAGCTCGGATTTGACACCACCATGCCAAGCATCATCACC
AAGTAGACGCGAGCGAGCTTCTAGAACCTTCTAGTAGTAGCCCCCCCCTGCCCA---CTCGCCCCGTCCACGCGACATAC
ATACATGGAGACGTCGACCGTCACCTACTCCTCCTCCTCGCCGCCCCCTTCCTCCTCGCCGCC---GCAGCAGGCCGAGC
AGGCCGCCGACCTCGACGCCGTCAGCCTCGGCCGCCTCAGCGCCAACCTCGAGCGCCTGCTCGACCCGGCCTTCCTCAGC
TGCGCGGACGCCAACGTCGTCCTAGCGGCCGGGGGAGACGACGCCGCCGCCGTCGTCGGCGTCCACCGCTGCATCCTCGC
CGCCAGGAGCAGCTTCTTCCTCGACCACTTCTCCAATAAGCTCGCCGACCCCGCCGCCGCCGGCGAGA------AGGAGA
AGGAGAAGGAGAGGCCGCGGCTGGAGCTCGCGGACCTGGTCCCGGGCGGGCGCCACATCGGCCGCGACGCCCTCGTCGCC
GTTCTCGGGTACCTGTACACGGGCCGCCTGAAGCCGCCGCCGCGGGACTCCGCGGTGTGCGTCGACGAGCGCTGCCCGCA
CGAGGCCTGCCGCCCGGCGATAGACTTCGTGGTCGAGTCCACCTACGCCGCCTCCGGCTTCCAGATCTCCGAGCTCGTCT
CGCTCTTCCAGGTAGGAGTAATAAGCAACAGATACTACCTCTGACAACCTG-----CACAACACATACATATATACACCT
GACGATGCATTTTGTTACAG------------------------TGCAAATTGTTCATCATTTCTGGTGAAAGAAAAGAA
ATTTGTTGATCAGTGAATCACCCAAATGTGAAGAAATTTGATG-------------------TTGATTCTGATTTTGCAG
CGTCGGCTGTCAGACTTTGTGAACATAGCTCTGGTGGAGGACATAGTGCCCATCGTTCACGTTGCGTCCACCTGCCAGCT
CCATGAGCTGCTCAGCCAGTGCATCCAGCGGGTGGCAGGATCCAGCGTCGACAGCCGGTACCTCGAGAAGGAGCTCCCAG
ACGATGCATTTGCCAAGGTGAAGGAGTTCCGGCGATACTCGCTGCACGACGATTCAGACGAGTTCATTCTGGACCCCGAG
CATGCCAAGAAGGTCAGGAACATCCACAAGGCCCTGGACTGCGACGATGTGGACCTAGTTGGCTTGCTACTACAAGAGTC
TGCGATCACCTTGGATGATGCATTGGCAATACACTATGCCGCTGCATATTGTGAGCCTAAAGTGTTGGCTTTGCTCTTGA
AGCTGGACCCTGCTGGTGACTGTGTTAATGTGAATCTGAAGAATGATAGTGGGTACACACCGCTGCATTTGGCGTGCATG
AGGCGAGAGCCGCAGATCCTTCTCTCTCTTATCGAGAAGGGCGCGTCCGTGGTGGAGAGGACGCAGGATGGGCGCGACGC
GCTTACCATCTGCAAGAGACTGACAACAGAGAAAGACTGCAACAAGAAGCTGGAGAAATGTAAGGAGAGAAGCAAGGCTT
ACTTGTGCATTGACATCCTTGAGCAGGAGATCAAGAGGAAATCCTTCATCTTCGAGGAGCTCCTTTCGGCGGAAGTTTCG
GTTGCCACACCTTTGCTGGTAGACAATTTCCACATGAGGCTCATAAACTTGGAAAACAGAGGTTTGTACATATTACTTTG
GTTCAATATAGTC--TGTAGTTGGCCTTCTCAGTAAGACCATAGTGAGGTGCATTTGTGCT-GTGGTGTTTTAATATTTG
ATCTCATGGTAGAGACTAGAGAGAGTTTTGAGAATTCGGTGCTCTTTTCCTTCTCCTGAATTTAGAAGCACAAGTTCCTG
ACAGGCTTAGTTTTTTGTTGCATTGGGTTCTCAATATGCTCTGTTAGCCCAAACTATG--TGTTTTTCTTTTCAAATATC
ATCTATATCATAGAACATCAAATTATCTCTTTCTTAGTACTCCCCCTCTAAACTAATATAAGAGCGTTTAGATTAGTATT
TTAGTGATCTAAACACTCTTATATTAGTTTATGGAGGGAGTATTTGCTATTTGTGATAGCGATATGCTCC----------
----------------------------------------AGTTACTTGCTATGTTGTGTAGCACAAAAGGAGGAAATCT
AATACTGAAAACAGTAACAGCAGAGTTATACTGCTGCTTCCTTTTCTTTTCCCAGCTAGAAAGAAGCATACAATTCTTAA
AATCATTGCTGAAATATATTTTTGT-GTGTCTATGCAGTTGCCTTTGCAAGAATATTCTTCCCTTCCGAAGCCAAGCTTG
TGATGCGCATTGCACAAGCCGACTCAACCGAAGAGTTTGCCGGTCTCACGTCAGCTAATTTCAGTAAACTGAAGGAGGTT
GACCTAAATGAGACCCCTACAATGCAGAACAAGAGACTGCGTGAACGCCTTGATGCATTGACAAAGACAGGTGATTTTAA
CATAATCATGCATCTGTTACGAAATGGGAATTGCT-TCAGTGTTTCTCTGTGCTAATAGATCTGTGG-TCTTCGAGCAAA
CAATGGCTAGAATTATGGACAACGCATTAACAGACCAAAGTATGATACACAGAGAAATGGTTTCGCTTTATGCAAAAGAT
TCGATGCACACATCTTGCTTATGCCATTAGCTGTATGCATCGTCTGATGCAGAGGCCGCGGGTAAACCCTCTTTTTAGGA
AAAAAAATAAACATCTTGCTTATGCCAAGATATCGTCATGTACAACTTATGAGATAGTTCAATCTAGTAGGATAGGAACT
AATTAAAGGGCAGATTATATTGTTGTCCTGGTATGCGATGATGGTTTTCGAGACCTAGCATACAATTTTTTATTTGGCTT
ACGTTCTGTTCAACAAAAACGTGCTTGCTTGAGCTAACAGATATTTCTTTGGTCTTCAGCCTTGCTTTTAGTATTATGTT
TTCTTGACCACATGTCCCCTCAACTTACACTGCCTGTTTTGCTTTAATATGCACAAACTATTTGCAAATAGGAGTCTTAT
GCAAACGAACAACTTCTAAACTCTTCCAGTACTCTTCTTTATGGATAAT---TATGTCACTGGTCTTCTTTAGCTGATTA
AGCTCACAGAG---------------------------------TATTAAACAAACTTGTGTTTCTGTTTCAGTTGAGCT
AGGGCGAAAGTACTTCCCGCATTGTTCGGATGTTCTCGACAAGTTCCTCATGGAAGAATCCACAGATCTGCACTTCCTGG
AAAGCGGCAGTGCCGAGGACCAGTACACCAGGAGGACGCGCTTCTCTGAGCTCAAAGAGGATGTGAGGAAGGCCTTCAGC
AAAGACAAGGCTGTTGCAGCCATAGCCTCATCGACGTCCTCGTCTTCACCGAGAGGTGATGGAAAGGTTAGTAGACATGG
TCACAAGAAGGCGAGGCTGTCGCGGTGATACATGTGCTCGGTGTCGCCATGTC--GGTAGGTTAACGCCGGATCCGTCGC
GCGTGATGGT--------TTGAGAGAGGTGGGGTGGGGGGAAGCTAGCAA--GGTTTTGTTGACAGTTTGTAGTGCAGGG
AAACCATGTATGTAG----ATGTAACCAAGCAAGCATATCGGTTCTAGCTTGATTGTTGCTTGGTGCATTTCTTGTAGTT
TACTGTGGTTTGACATGTGACAGGCTTCAGTAGATGATTTTCGATCGCCGGTGGGC-ACTCTTCACAGTGATTATATCCA
TCTTGCATGCTCAGGCCTCTTGGTGGTATCAACTGATTC-------------TGAAGGTTGAGCCATGATAAATATGCAC
GGGCTGTTAATCCTGTAGAGACCT----------------CCAGGGATTAGTGCACAAACATGAAACATGAATAGTAGTG
TTGGAGGTAAAAAATTCCACA-------CGGACAGTGAATTCGATCAAAGAAAAATTAGGGGAAAAAAATG---------
--------ACATGAAAC-CTCGTCGACCATTCTACTCATGAACGGAGTTCCG--TGA--------------------GGG
ATGACACCCTAGTGAAGAAAATACAACCGACCATC-CTATTGCTTGAAACAATATTTTCGAATATAGCTTTGATTTCGTC
ATTCC-TTTTGCTAGAATATCAAGGGTGTCATTTTCTCGTGAAACTTTAT----TACTCCCTCCGTC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>SNPs
S----------------------S-------------S---------S------SS--S-S-------------------
---------------------------------------------------S-S-SSSSSSSS-------S-S-------
-------------S----------S-------------------------------------------------------
-------------------------------------------------------------------------------S
SSSSS---------------S-----------------------------------------------------------
----------SSS-----------S------S----------S-------------------------------------
-------------------------------------------------------------------------S------
----SS--------------S--S--S--------------S-S----S-S---S--SS---------------------
---------------------S------------S---------------SSS--SS---SSSS-SS-SSSSSSSSSSSS
SSSSSSSSS---------S-S-------------SS---SS--S--S--------S------------------------
----------------------S----S------------------------------------------------S---
-----------------S------------------------------------------------------S-------
--------------SSS-----------SSSSSSS--SSS--------------------SSSSSSS-------------
--------------------------------SS--------S--S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
---S------S---------------------------S-------S---------------------------------
--------------------------------------------------------------------------------
-----S--------S-----------------------------------------------------------------
---------------------S-----------S----------------------------------------------
--------------SS-S----S------------------------S--------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S--------------S-----------------------------------------------------------
------------------------S--SS--S-S--------S-SS-----------------------------S----
-------------------S-----------------------------------S--------------------S---
--------------------------------------------------------S--S---S----S--S--------
------------------------------------------S--S-----S--------------S-------------
-------------------------------------------------------------SS----------S------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
----------------------------------------------------------------------S---------
--S-----------------S-----------------------------------------------------------
---------------------------------------------------------S-------------------S--
-------------------------------S-----------------------S----------------S---S---
----------------S--SSS----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-------------S-------------------S-S-----
--------------S------S--------------------------------------------S-------------
-------S-----------S--S---------------------------------------------------------
-----------------------------------------S-----------------------------------S--
-------------------S--------S-----------S-------S--------------SS---------------
--S-------S--S-S-SS-S--S---SSSS----SSS--S--SSS---S---SSS--SSSSSS-SS-SSSSS--S--S-
--------------------------------------------------------------------------------
-----------------------------S-------------S-S---SSS----------------------------
--S--------------S----SS--S-----------------S----SS-----------------------------
--------S-----S------S----------------S-----S---------------S-----------S---S---
-SS-------S-S----------------------------------S-----S--S-----------------S-----
------SSSSS------------------------------------------S------SS-SSSS---S---------
------------------------S-----------S-S----S------------------------------------
------------------------------------------------------------------------------S-
-------------S------------------------------------------------------------------
-----------------------------------------------S--------------------------------
------------------------------S--S---------------S-----------------S------------
---SSSSS-SSSSSSSSS--------------------------------------------------------------
------------------------------------------------S---S---------------------------
-----------------------------------------SS----------SS--S-----------S---S------
--------------------------S-----SSSSS-SSSSSSSSSSSSSS-----------S----------------
------------------------SSSSSSSSSSSSSSSS---------------S----------------S-------
----S-S------------------SS--S------------------------------------SS-S---S----S-
S-S--------------S----------------------S----S---SSS--SSSSSSSSSSSSSSSSSSSSSSS---
-----------------------------S---------------------------------S----------------
---SSS-------S----------------S---S---------------S----------------SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-S--S----------
------S---S-------S------------S-------SS----SSSSS--------S----S-----SSS------S-
-----S-SSSS-SS--S---------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S------------------------------SSSSS----
------S----------SSSSSSSS
>forward_1025
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TCGGATTTGACACCATGCCA---------------
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>reverse_2286
--------------------------------------------------------------------------------
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---------------------------------------------CTATTGCGAGCCCAAAGTGC---------------
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>forward_2157
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---------------------------------------------------------ACGAGTTCATCCTGGACCCT---
--------------------------------------------------------------------------------
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-------------------------
>reverse_4511
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------------------------------TGTATGCTCGATGTCGCCAA------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
