>input_sequence_25855
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------------------------------------------------------------------------ATGGACCA
GCCGCGGTCGAAGATGGCGGAGGACATGGCGGCGCAGCGGGCGGCGTGCGAGCGGCAGATGGCCGCCGGCCGAGACCGCT
TCGCCTCCGCCTCGGCGGCCGTCCGCGCCGCCACCCTCTCCGCCCGCTCCGGCGCCCACCAGTCCCTCTCCCGCCGAGGC
ACGCCCCCCT-------------CCCACTCGTCTCAGCCCGAACTGAAAACCCCAATCTTTCT-CCAAGGGGCCCTCTTT
TCGACCGGCCGAAACGAAATGCGCCAAATGCGGGCGAGATTCTTCAGATTTCGGGCTCGATTAGGCGGGTTTTCG--CTC
CGATTGACGAGATTCTCCGTGTTGCAGAGGACCTCGACGGACTCAAGAAGCGGCTGCGGGACCTGGGAGCTGACCTAGGG
CAAGCTCTGTCCGGTAAGTGAAGACCCTGAAATCTGCACATTTCCTTTGCTCAATGTTGCACACTGTTCTTTTCAGTGGT
GTTATTGGGTGACTGGTTCATGGTATGCCTGAAATC--------------------------------------------
------------------------------TGTGTGTGTGCCAACTTTTGCAGTTAAACTCGTCATGGAGTCGAAATGCG
AGAAACTCAGGGAGTCGATTTCAGCCTCGGCTGCTACAAGTGAGCAGCTAGGTGACCTGGTCACCAATCAGAGGAACAGG
AGCGAGCGGCATGCCGCGGTCATATCGGATGTCCTCGAGGGTAACTTCAAAATATTTCTAGTTCAGCATTTGGGCAGTTA
TGTTGTTTT---CGTATATCGTTTGATACAGCGTAGCTCTGT---ACCTGTTTGTT-GTCACGCTTGTTTCCTTATTAAT
TGAACTGCTCCAAGA---TAGTTTATGTGACATCGATGTA---ATTATCAATGTACCATCGCAGCTGCTGAGGCTTTCGA
AGCAAAGAATGATGAAGATGTTACACAGTTGAAAGACATGGAAAAGGCTATCTGCTGGTATCAAAAGCGCCTTGGCTTCC
AGCCCGTTGTTGAAGGGGAAGGTAATTGATAATTTGGTGCTGTGCTTAAGGAAGTTATGTGGAT---GTCATGATTACCC
CTGATTGCCCGTTTTTCCCTCAACAAGGTGTGAAATTCGTATTTGACAAGGTTGACTTGCAAAGTCCTGAGAAAGAGTTT
TCATTTTCCTTAAAGTTTGACGGTGATAGATATACCTGTGAGTTGGAATTTCACATGGATTTCGTCTT-AATTTATACCT
TATATATTTTATTTCACGTGATTAGTTGTAAAACACACACTCTTTTTATTCGTAGCAGTACTTCGATGTAGTCCACCCGT
GGAAGATTCTGAGGAACTGGTGAAGGATTTGAACCTCACTAACGATCTAATCAAGTTTGTAAGAATAATCCGACAGAGGT
TCCAGGCTGCTGCTTTGAATGGTACCCAATATATATATATATATATTTTTTGTACGATCAAGCATCAAGTTCATAAGCAT
CTTATATTAGTATAGTACAATAAACAATCTGTATTTCCTTCCTTTACTTCTGCGTGCTAGTAAGGCACAATAAGCCTATA
AGCTTCATCAGGTCTGTTTCCCCCAGTAACCATATGAATGAGGCTTATTTCCTGGAACTCCAAACTGTATCTGATGTTCC
AA-------------ATAAGTTGATGACTTTTTGGTTCTGGCGTTTGAGAATTGCCCAAACCATATGTCAAATGTTCCAA
ATAATCCAGTGTATGATCTTCACGTACAAGATTGGGTCTTCTATTTTTTT---CATGGAACTGAACCTTCCTTTGCCTGT
TTATTCACATAAGCTTTTGTCCTTTGTCATGTAATCTTTAATTTTTAATTGCTTTGTCTTTCGCAGGGGATCTTCCTGTA
AGCCCAACAGTTTGTTCAGATGCTTCCGCTATACCCATCTCATCTCCGGTGATAAAGTCAGTTGACTCCAGAAGCAAAAA
TGATAGAGATAGAAGTAATTCTCAAAGTAAGAACAGGAAGCCGGCTCTTCCTGCTAAGAGAAAAGCTTCTGCCCTATCGG
TAGCATCTCCTGTTTCTGTGCGTCGCTCCCCGCGTTTTGTGGTAATCGTCTCATCACCCCTATTTTCAGTTTAGCATTAT
CTACAGGAACATGAAATCTGGAATTCTTAAACTGCCACCCCGTACTTGTGATAGCTTTCTATATATCGGGACCATCTGGC
CTTTGGTCTAGA-AATACTCTGGAGGAAAACAGCTTCTACACCAAAATATCAATTCTGATTATTATTCCCATGTTGCAAA
TAACACACTAGCATGTCGGACGTCCCTACTTTTTGTTCGATATTGCTTCTTTGCATGTGTGGTTTCCGTGGAGCAAGTAA
TAAATGTTTCAGAGGGCTAGATCAGTTTCTGTGTATAATGAATCACTGCCAGACTACTCCCTTCATAGGCCTTCCGGAAC
TTAGAGATTTACCACTAATTGATCTAACAATGATTTCTCGCTAAATTTTAAAACACCACAAAATTTGGTATGACGTAGGG
CTAGTATCCTGTCAGTAAGAACGACAAATCTGTGGCCTTTCAGTTTTTGTTGCACTGTCGGATAGCCAGTGTCAGGCAAC
CAATATTTTCTTTGCAGTGTGCACATTTACTTGGTATTAAAAATAAGGCAATGAAAACTGAGGTGTGGTTTTTCTTGAGA
GAAAAAAGTGCCATGAAAAACTGAGCTTTATGTACTAATTTCTGTCCAGATATGCCATGCTTGCTATCTGAAATTCCTTG
TAGGTATAAGGTGTAAAACCAAGTACTCCCTCCGGTCCATATTAATTGTCACTGGAGTACCATGGTTTATCTTTGACTTC
CTGAAATGAGAACTGCATTAACAAAATCACACTTTACTCTCGGTGCGAAAAATTGCTGCATTTGGGTTCTGTTCAGCATA
CCTCAGTTTT--GCGCTTTGCTTACGCAAACCTCATACGCAATTAT-------------------------GCAAATAAC
ACGATTGTCA--CCCATTGTTTTGCGCA-----GGGGAACGAGGGAGTTGCCAGCTGA----------------------
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>chr1D_1_TraesCS1D01G031600
CCACGACTATTTCTTCAACGAAATACTCCTAGCACGACGAGGTTTTGCGTCGAACCCTCTTTTGTGCCGATGGAGGTGGA
GGTACTGGACTGGGAAGTGGAATGGCTGCCGGTATACTCATCGGAAGAAGGATATGTGTGGGTTGTGGCTGTGGGATCGA
TCCACTCGGGGATGTCAACATCTAAGTCACTAGTATTGAAGTTGAACCGGTTGGGATCACTACCCATGGGATCATCCATG
TGTTGAGTGTGAGAAATAAGAGGAAGAGGAGGTTTGAGTGTGAGGAATGAGAGGGGTGGGCAGCCCTTTTTATAGCAAAA
AGCTGACATTTTTTAGACCAAATTTGCCCTCCAATGTTCAAATATTCAAATTTGCAACAAAATATACCTAAACAGCCCCA
AATATGGCCAAACCCCACCCAA-CCCCCCCCCTAAATCCCACTAAACCTCCTAAACCCCCGCTCCCCCAG----------
CCCCC----CGCTCCCTCGATCGAAGCGTCCAATGGACATATGCCAATGGATCCCTCCCTCGCTCACGTACTCCCGTGCC
GTGCCATGCGCATCGTGCTCCCGTGCCGTGCCGGGCTGGGTCGTGCCCGTGCCGGCCTGTTACTGGGCGTGTCGTGCCGG
GCTGGCACGCGTGCCAGGCATAGCAGCCCAGG-----------CACGGCCCAAGCAAGGCCGCGTGCCAGGCACGGCCCA
CATAGCCTCGTGCCGTGCCGGCCCGTGACGGGCCAGGCACACGGGCTATCGTGCCGGCCCGCCAGAACCGGCCCGTTTGG
CCAGGTATGGCTTAAACCCTGGGAG--GGGCAAAACCGAAAATACCCCCAAAAACAGAAAGAAGCGAGACGG----GGTT
GGTGTGTCCCACTTCAACAACCTTCAGCAGACAGCGGAGAGCAGCAGCGGAAGCCGCGCCTTGCTCCTCGCCCGCTCTCC
TCACCGGCGCCGCCTTGCTCTCCTCGCCGGCGGCCCAAGCTCCTCACCCGCCGCGAGGATACGTCGGCAGGTATGGACCA
GCCGCGGTCGAAGATGGCGGAGGACATGGCGGCGCAGCGGGCGGCGTGCGAGCGGCAGATGGCCGCCGGCCGAGACCGCT
TCGCCTCCGCCTCGGCGGCCGTCCGCGCCGCCACCCTCTCCGCCCGCTCCGGCGCCCACCAGTCCCTCTCCCGCCGAGGC
ACGCCCCCCT-------------CCCACTCGTCTCAGCCCGAACTGAAAACCCCAATCTTTCT-CCAAGGGGCCCTCTTT
TCGACCGGCCGAAACGAAATGCGCCAAATGCGGGCGAGATTCTTCAGATTTCGGGCTCGATTAGGCGGGTTTTCG--CTC
CGATTGACGAGATTCTCCGTGTTGCAGAGGACCTCGACGGACTCAAGAAGCGGCTGCGGGACCTGGGAGCTGACCTAGGG
CAAGCTCTGTCCGGTAAGTGAAGACCCTGAAATCTGCACATTTCCTTTGCTCAATGTTGCACACTGTTCTTTTCAGTGGT
GTTATTGGGTGACTGGTTCATGGTATGCCTGAAATC--------------------------------------------
------------------------------TGTGTGTGTGCCAACTTTTGCAGTTAAACTCGTCATGGAGTCGAAATGCG
AGAAACTCAGGGAGTCGATTTCAGCCTCGGCTGCTACAAGTGAGCAGCTAGGTGACCTGGTCACCAATCAGAGGAACAGG
AGCGAGCGGCATGCCGCGGTCATATCGGATGTCCTCGAGGGTAACTTCAAAATATTTCTAGTTCAGCATTTGGGCAGTTA
TGTTGTTTT---CGTATATCGTTTGATACAGCGTAGCTCTGT---ACCTGTTTGTT-GTCACGCTTGTTTCCTTATTAAT
TGAACTGCTCCAAGA---TAGTTTATGTGACATCGATGTA---ATTATCAATGTACCATCGCAGCTGCTGAGGCTTTCGA
AGCAAAGAATGATGAAGATGTTACACAGTTGAAAGACATGGAAAAGGCTATCTGCTGGTATCAAAAGCGCCTTGGCTTCC
AGCCCGTTGTTGAAGGGGAAGGTAATTGATAATTTGGTGCTGTGCTTAAGGAAGTTATGTGGAT---GTCATGATTACCC
CTGATTGCCCGTTTTTCCCTCAACAAGGTGTGAAATTCGTATTTGACAAGGTTGACTTGCAAAGTCCTGAGAAAGAGTTT
TCATTTTCCTTAAAGTTTGACGGTGATAGATATACCTGTGAGTTGGAATTTCACATGGATTTCGTCTT-AATTTATACCT
TATATATTTTATTTCACGTGATTAGTTGTAAAACACACACTCTTTTTATTCGTAGCAGTACTTCGATGTAGTCCACCCGT
GGAAGATTCTGAGGAACTGGTGAAGGATTTGAACCTCACTAACGATCTAATCAAGTTTGTAAGAATAATCCGACAGAGGT
TCCAGGCTGCTGCTTTGAATGGTACCCAATATATATATATATATATTTTTTGTACGATCAAGCATCAAGTTCATAAGCAT
CTTATATTAGTATAGTACAATAAACAATCTGTATTTCCTTCCTTTACTTCTGCGTGCTAGTAAGGCACAATAAGCCTATA
AGCTTCATCAGGTCTGTTTCCCCCAGTAACCATATGAATGAGGCTTATTTCCTGGAACTCCAAACTGTATCTGATGTTCC
AA-------------ATAAGTTGATGACTTTTTGGTTCTGGCGTTTGAGAATTGCCCAAACCATATGTCAAATGTTCCAA
ATAATCCAGTGTATGATCTTCACGTACAAGATTGGGTCTTCTATTTTTTT---CATGGAACTGAACCTTCCTTTGCCTGT
TTATTCACATAAGCTTTTGTCCTTTGTCATGTAATCTTTAATTTTTAATTGCTTTGTCTTTCGCAGGGGATCTTCCTGTA
AGCCCAACAGTTTGTTCAGATGCTTCCGCTATACCCATCTCATCTCCGGTGATAAAGTCAGTTGACTCCAGAAGCAAAAA
TGATAGAGATAGAAGTAATTCTCAAAGTAAGAACAGGAAGCCGGCTCTTCCTGCTAAGAGAAAAGCTTCTGCCCTATCGG
TAGCATCTCCTGTTTCTGTGCGTCGCTCCCCGCGTTTTGTGGTAATCGTCTCATCACCCCTATTTTCAGTTTAGCATTAT
CTACAGGAACATGAAATCTGGAATTCTTAAACTGCCACCCCGTACTTGTGATAGCTTTCTATATATCGGGACCATCTGGC
CTTTGGTCTAGA-AATACTCTGGAGGAAAACAGCTTCTACACCAAAATATCAATTCTGATTATTATTCCCATGTTGCAAA
TAACACACTAGCATGTCGGACGTCCCTACTTTTTGTTCGATATTGCTTCTTTGCATGTGTGGTTTCCGTGGAGCAAGTAA
TAAATGTTTCAGAGGGCTAGATCAGTTTCTGTGTATAATGAATCACTGCCAGACTACTCCCTTCATAGGCCTTCCGGAAC
TTAGAGATTTACCACTAATTGATCTAACAATGATTTCTCGCTAAATTTTAAAACACCACAAAATTTGGTATGACGTAGGG
CTAGTATCCTGTCAGTAAGAACGACAAATCTGTGGCCTTTCAGTTTTTGTTGCACTGTCGGATAGCCAGTGTCAGGCAAC
CAATATTTTCTTTGCAGTGTGCACATTTACTTGGTATTAAAAATAAGGCAATGAAAACTGAGGTGTGGTTTTTCTTGAGA
GAAAAAAGTGCCATGAAAAACTGAGCTTTATGTACTAATTTCTGTCCAGATATGCCATGCTTGCTATCTGAAATTCCTTG
TAGGTATAAGGTGTAAAACCAAGTACTCCCTCCGGTCCATATTAATTGTCACTGGAGTACCATGGTTTATCTTTGACTTC
CTGAAATGAGAACTGCATTAACAAAATCACACTTTACTCTCGGTGCGAAAAATTGCTGCATTTGGGTTCTGTTCAGCATA
CCTCAGTTTT--GCGCTTTGCTTACGCAAACCTCATACGCAATTAT-------------------------GCAAATAAC
ACGATTGTCA--CCCATTGTTTTGCGCA-----GGGGAACGAGGGAGTTGCCAGCTGATGCGTACCCTGACCTGGCCAAA
CTAATTCCTAACCGATAATTTGGCTATCCCGCTCTTCCCTGTAAACGTCGTTGGGCAGCAGACTCGGCTATTGTTCAACC
CCCATTAACT-CCCCAAAGAGAATGCTTTTCTTTAGTCCCCTTTAACTTCCAAGGAT---GGCTTGGCTCGCAGAAAGCC
TGCGGAATCGTTTGTCGATCGTTTAGAACAGAGTTTGGTGTGGCCTCCGAAGCGTTGGTGTGATTTTGGACATGGTTTTT
GTCGCGGAGAGG-CTTGGTGCCG-AAGGTGGATGTAGTTTCTGGGCGTGATTTTGCTTAGGGATGTAAGTGGCAAATAAA
TGGCGTCCGCAATCCCGTTTAGTTAGTTTTTGCTAGCTTGATAGTTCATTTTCCTCAAACAAACAAAAAACCTTTTTGAA
TTATCATATCATAAGTGGACTTTAAACGGGATTAAACGGGACCCGGTTGACATCCTTGCTGTGTCTGCAATGTAGGATCT
ATTGTTGAGCCTATGTAGTGCCGTGCAATGTTA--------CGGTCGAGATCTTCGGTGTAT-TTCAGTTCATGGCCATT
TCATCAATTTGCATCTGTTTATGGCTAATGTCATACTACTCGTGTTCGTGCCATGCTCTTTTTGC-CATATATTTTTGTG
TTATGCTTTTGCCAAAATGGTGGCCAGTCTTTTGCCGTTTATTTGCGGCTTGTTCATGCGTTGATCGTTTGATTCGTAAG
GACGGGATCTCTAGGG------------------GTTTGGAGGAAAAAATTCATCGACATGGACCTCTTGGTAAAATTAC
CTTTTTGTTTTCTGTGTTC-----TCAAGCACTCTCTGGTTTGAAATTCATGTCGTTTTCTAAATCATACAAGATCCAAG
ATACTTCAATCACGCGTTTCTTTATATCCCAACGTTTTAAAAAAAAATCATGCGAAATGAAACGGCCATTATCCAAAAGC
AAGGTTTCCTTTTGGGTGTGGCTGGATCTCGGTCAGCTAAGATTTTAACCAAGTCTC
>chr7D_1
CCACGACTATTTCTTCAACGAAATACTCCCAGCACGACGAGGTTTTGTGTCGAACCCTCTT-TGTGCCGATGGAGGTGGA
GGTACTGGACTGGGAAGTGGAATGGCTGCCGGTATACTCATCGGAAGAAGGATATGTGTGGGTTGTGGCTGTGGGATCGA
TCCACTCGGGGATGTCAACATCTAAGTCACTAGTATTGAAGTTGAACCGGTTGGGATCACTACCCATGGGATCATCCATG
TGTTGAGTGTGAGAAATAAGAGGAAGAGGAGGTTTGAGTGTGAGGAATGAGAGGGGTGGGCAGCCCTTTTTATAGCAAAA
AGCTGACATTTTTTAGACCAAATTTGCCCTCCAATGTTCAAATATTCAAATTTGCAACTAAATATACTTAAACAGCCCCA
AATATGGCCAAACCCCACCCAAA--CCCCCCCTAAATCCCACTAAACCTCCTAAACCCCCGCTGCCCCGCT-CCCCCAGC
CCCCC----CGCTCCCTCGATCGAAGCGTCCAACGAACATATGCCAACGGATCCCTCCCTCGCTCACGTACTCCCGTGCC
GTGCCATGCGCATCGTGCTCCCGTGCCGTGCCGGGCTGGGTCGTGCCCGTGCCGGCCTGTTACTGGGCGTGCCGTGCCGG
GCTGGCACGCGTGCCAGGCATAGCAGCCCAGG-----------CACGGCCCAAGCAGGGCCGCGTGCCAGGCACGGCCCA
CATAGCCTCGTGCCGTGCCGGCCCGTGATGGGCCAGGCACACGGGCTATCGTGCCGGCCCGCCAGAACCGGCCCGTTTGG
CCAGGTAT------------------------------------------------------------------------
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>chr4D_1
CCACGACTATTTCTTCAACGAAATACTCTCAGCACGATGAGGTTTTGTGTCGAACCCTCTT-TGTGCCGATGGAGGTGGA
GGTACTGGACTGGGAAGTGGAATGGCTGCCGGTATACTCATCGGAAGAAGGATATGTGTGGGTTGTGGCTGTGGGATCGA
TCCACTCGGGGATGTCAACATCTAAGTCACTAGTATTGAAGTTGAACCGGTTGGGATCACTACCCATGGGATCATCCATG
TGTTGAGTGTGAGAAATAAGAGGAAGAGGAGGTTTGAGTGTGCGGAATGAGAGGGGTGGGCAGCCCTTTTTATAGCAAAA
AGCTGACATTTTTTAGACCAAATTTGCCCTCCAATGTTCAAATATTCAAATTTGCAACAAAATATACCTAAACAGCCCCA
AATATGGCCAAACCCCACCCAACCCCCCCCCCTAAATCCCACTAAACCTCCTAAACCCCCGCTGCCCCGCTCCCCCCAGC
CCCCC-----GCTCCCTCGATCGAAGCGTCCAACGGATC--------------CCTCCCTCGCTCACGTACTCCCGTGCC
ATGCCATGTGCATCGTGCTCCCGTGCCGTGCCGGGCTGGGTCGTGCCCGTGCCGGCCTGTTACTGGGCGTGCCGTGCCGG
GCTGGCACGCGTGCCAGGCATAGCAGCCCAGG-----------CACGGCCCAAGCAGGGCCGCGTGCCAGGCACGGCCCA
CATAGCCTCGTGCCGTGCCGGCCCGTGACGGGCCAGGCACACGGGCTATCGTGCCGGCCCGCCAGAACCGGCCCGTTTGG
CCAGGTATGG----------------------------------------------------------------------
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>chrUn_1
CCACGACTATTTCTTCAACGAAATACTCCCAGCACGATGAGGTTTTGTGTCGAACCCTCTT-TGTGCCGATGGAGGTGGA
GGTACTGGACTGGGAAGTGGAATGGCTGCCGGTATACTCATCGGAAGAAGGATATGTGTGGGTTGTGGCTGTGGGATCGA
TCCACTCGGGGATGTCAACATCTAAGTCACTAGTATTGAAGTTGAACCGGTTGGGATCACTACCCATGGGATCATCCATG
TGTTGAGTGTGAGAAATAAGAGGAAGAGGAGGTTTGAGTGTGAGGAATGAGAAGGGTGGGCAGCCCTTTTTATAGCAAAA
AGCTGACATTTTTTAGACCAAATTTGCCCTCCAATGTTCAAATATTCAAATTTGCAACAAAATATACCTAAACAGCCCCA
AATATGGCCAAACCCCACCCAAA--CCCCCCCTAAATCCCACTAAACCTCCTAAACCCCCGCTGCCCCGCTCCCCCCAGC
CCCCC----CGCTCCCTCGATCGAAGCGTCCAACGGATC--------------CCTCCCTCGCTCA--------------
-------------CATACTCCCGTGCCGTGCCGGGCTGGGTCGTGCCCGTGCCGGCCTGTTACTGGGCGTGCCGTGCCGG
GCTGGCACGCGTGCCAGGCATAGCAGCCCAGGCACGGCCCAGGCACGGCCCAAGCAGGGCCGCGTGCCAGGCACGGCCCA
CATAGCCTCGTGCCGTGCCGGCCCGTGACGGGC-AGGCACACGGGCTATCGTGCCGGCCCGCCAGAACCGGCCCGTTTGG
CCAGGTATGGCT--------------------------------------------------------------------
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>chr1A_1
CCACGACTATTTCTTCAACGAAATACTCCCAGCACGCCGAGGTTTTGTGTTGAACCCTCTT-TGTGCCGATGGAGGTGGA
GGTACTGGACTGGGAAGTGGAATGGCTGCCAGTATACTCATCGGAAGAAGGATATGTGTGGGTTGTGGTTGTGGGATCGA
TCCACTCGGGGATGTCAACATCTAAGTCACTAGTATTGAAATTGAACCGGTTGGGATCACTACCCATGGGATCATCCATG
TGTTGAGTGTGAGAAATAAGAGGAAGATGAGGTTTGAGTGTGAGGAATGAGAGGGGTGGGCAGCCCTTTTTATAGCAAAA
-GCTGACATTTTTTAGACCAAATTTGCCCTCCAACGTTCAAATATTCAAATTTGCAACAAAATATACCTAAACAGCCCCA
AATATGGCCAAACCCCACAGAAA--ACCCTCCTAAATCCCACTAACCCTCCTAAACCCCCGCTGCCCCGCTCCCCCCAGC
CCCCC----TGCTCCCTCGATCGAAGCGTCCAACGGATCGAT---------TCCCTCCTTCGCTCT--------------
-------------CTCCCAGGCGCATCGTGC--TCCCGGGCCGTGCCCGTGCCGGCCCGTTACTGGGCGTGTCGTGCCGG
GCTGGCACGCGTGCCAGGCATAGCAGCCCAGG-----------CACGGCCCAAGCAGGGCCGCGTGCCAGGCACGACCCA
CATAGCCTCGTGCCGTGCCGACCCGTGACGGGCCAGGCACACGGGCTATCGTGTCGGCCCGCCTGAACCAGCCCGTTTGG
CCAGGTATG-----------------------------------------------------------------------
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>chr5B_1
CCACGACTATTTCTTCAACGAAATACTCCCAGCACGGCGAGGTTTTGCGTCGAACCCTCTT-TGTGCCGATGGAGGTGGA
GGTACTGGACTGGGAAGTGGAATGACTGCCGGTATACTCATCGGAAGAAGGATATGTGTGGGTTGTGGCTGTGGGATCGA
TGCACTCGGGGATGTCAACATCTAAGTCACTAGTATTGAAATTGAACCGGTTGGGATCACTACCCATGGGATCATCCATG
TGTTGAGTGTGAGAAATAAGAGGAAGAGGAGGTTTGAGTGTGAGGAATGAGAGGGGTGGGCAGCCCTTTTTATAGCAAAA
AATTGACATTTCTTAGACCAAATTTGCCCTCCAATGTTTAAATATTCAAATTTGCGACAAAATATACCTAAACAGCCCCA
AATATGGCCAAACCCCACCCAAA--ACCCCCCTAAATCCCACTAAACCTCCTAAACCCCCGCTGCCCCGCTCCCCCAAGC
CCCCCCCCCCGCTCCCTCGATCGAAGCGTCCAACGGATCGAT---------TCCCTCCCTTGCTCTCTCCCAG-------
-------GCGCATCGTGCTCCCGTGCCGTGCCGTGCTGGGTCGTGCCGGTGCTGGTCC-TTACTTGGCGTGCCGTGCCGG
GCTGGCACGCGTGCCAGGCATAGCAGCCCAGG-----------CACAGCCCA----------------------------
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>chrUn_39
--------------------------------------GAGGTTTTGTGTCGAACCCTCTT-TGTGCCGATGGAGGTGGA
GGTACTGGACTGGGAAGTGGAATGGCTGCCGGTATACTCATCGGAAGAAGGATATGTGTGGGTTGTGGCTGTGGGATCGA
TCCACTCGGGGATGTCAACATCTAAGTCACTAGTATTGAAGTTGAACCGGTTGGGATCACTACCCATGGGATCATCCATG
TGTTGAGTGTGAGAAATAAGAGGAAGAGGAGGTTTGAGTGTGAGGAATGAGAGGGGTGGGCAGCCCTTTTTATAGCAAAA
AGCTGACATTTTTTAGACCAAATTTGCCCTCCAATGTTCAAATATTCAAATTTGCAACAAAATATACCTAAACAACCTCA
AATATGGCCAAACCCCACCCAAA--CCCCCCCTAAATCCCACTAAACCTCCTAAACCCCCGCTGCCCCGCTCCCCCCAG-
----CCCCCCGCTCCCTCGATCGAAGCGTCCAACGGATC--------------CCTCCCTCGCTCA--------------
-------------CGTGCTCCCGTGCCGTGCCGGGCTGGGTCGTGCCCGTGCCGGCCTGTTACTGGGCGTGCCGTGCCGG
GCTGGC--------------------------------------------------------------------------
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>chr1B_784
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---------GCTTAAACCCTGGGAGAGGGGCAAAACCGGAAAATACCCCCAAAACAGAGAGAAGCTAGACGCGGTTGGTT
GGTGTGTCCCACTTCTACAACCTTGAGCAGACAGCGGCTGAG---------AGCAGCGCCTTGCTCCTCGCCCGCTC---
TCACCGGCGCCGCCTTGCGCTCCTCGCCGGCGGCCCAAGCCCCTCAGCCGCCGCGAGGATACGGCGGCAGGTATGGACCA
GCCGCGGTCGAAGACGGCGGAGGACCTGGCGGCGCAGCGGGCGGCGTGCGACCGGCAGATGGCCGCCGGCCGAGACCGCT
TCGCCTCCGCCTCGGCGGCCGTCCGCGCCGCCGCCCGCTCCGCCGTCTCCGGCGCCCACCAGAGCCTCTCGCGCCGAGGC
ACGCCCCCCCTCCCTCCCTCACCCCCTCTCGTCTCTGCCCAAACTGAAAACCCCAATCTTTTTCCCAAGGGCCCCTCTTT
TCAGCCGGCC---------------AAATGTTGGCGAACTTCTTCAGATTCCGGACTCGATATATACGTGGTTTCCCCTC
CGATTGACGAGATTCTCCGTGTTTCAGAGGACCTCGTCGAATTCAAGAAGCGGCTGCGGGACCTGGAAGCCGACCTAGGG
CAAGCTCTGTCTCGTAAGTG----CCCTGAAATCTGCACATT-CCTTTGCTTAATGTCGAGCACGGTTCCGCCCACTTCT
T--------TGATTGCTTCATGGCGTGCCTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAACTTTTGCAGTTAAACTCACCATGGAGTCGAAATGCA
AGCGACTCCGGGAGTCGATTTCGGCCTCGGCTGCAACAAGCGAGCAGCTAAGAGACCTGGTCACCGGTCAGAGGAGCAGG
AGCGAGCGGCATGCCGCGGTCATTTCGGATGTGCTCGAGGGTAACTTCAAAATACTTCTAGTTCAGCATTTGGGGAGTTA
TGCCGTTGTCGCCGTATATCGTTTGATGCAGCGTAGCTTTGTGGTACCTGTTTGTCAGTCACGCTTGTTTCCTTAAC---
TGAACTGTTCCGAGGTAGTAGTTTATGTGACACCGATGTAGTAATTCTCAATGTGCCGTGGCAGCTGCTGAGGCTTTTGA
AGCAAAGAATGATGAAGACGTTACACTGATGAAAGGCATGGAAAAGGCTATCTGCTGGTACCAAAAGCGCGTTGGCTTCC
AGGCCGTTGTCGAAGGGGAAGGTAATTGATAATTTGGTGCCATGCTTAAGGAAATTATGTTGATGTCGTCATGATTACCC
CTGATTTTTTTGTTCTTTTTCTT-AAGGCGTGAAATTCATATTCGACAAGGTTGACTCGCAAAGTCCTGAGAAGGAGTTT
TCATTTTCCCTAAAGTTTGACAAAGATAGATGTACCTGTGAGTTGGAACTTCACATGGATTTCATCTTAAATTTATACCT
C--ATATTTCATTTCACATGGTTGGTCGTAAAACACACATTCTTTTTATTCATAGCAGTACTTCGATGTAGTCCACCCGT
GGAAGATTCTGAGGAACTGGTGAAGGATTTGAACCTCACTAACGATCTAGTCAAGTTTGTAAGAATAATCCGACAGAGGT
TCCAGGCTGCTGCTTTGAATGGTACCCAATATATTTTTCCTT---TTTTTTGTACGAACAAGCATCAGGTTCATAAGCAT
CTTA------------------AACAATCTGGATTTCCTTCCTTCACTTCTGCGTGCTAGTAAGGCACA--------ATA
AGCTTCATCAGGTCTGTTTCCGCCAGTAACCATATGA----GGCTCATTTCCTGGAACTCCAAACTGTATCTGATGTCAA
CATTACAGAGGTTCTATAAATCGGCGACTTTTTGGTTCCGACGTTTGAGAATTGCCCAAACCATATGTCAAATGTTCCAA
ATAATCCACCGTATGATTTTCACGTACAAGATTGGGTCTTCTATTTTTCTCTCCATGGAACTGAACCTTCCTTTGCCTGT
TTATTCACTTAAGCGTTTGTCCTTTGTCATGTAATCTTTAATCTTTAATTGCTTTGTCTTTCGCAGGGGATCTTCCTGTA
AGCCCAACAGTTTGTTCAGATGCTTCCGCTATACCCATCTCATCTCCGGTGACAAAGTCAGTTGACTCCACAAGCAAAAA
TGATAGAGATAAAAGTAATTCTCAAAGTAAGAACAGGAAGCCGGCTCTTCCCGCTAAGAGAAAAGCTTCCGCCCTATCGG
CAGCATCTCCTGGTTCTGTGCGTCGCTCCCCGCGTTTTGTGGTAACCGTCTCATCACCCCTATTTTCAGTTTAGCATTAT
CTAGAGGAACATGAAACCTGGAGTTCTTAAACTGCCACCGCGTACTTGTGATGGCTTTCTATAAATCGGGACCGTCTGGC
CTTTGGTCTAGAAAATACTCTGGAGGAAAACAGCTTGTACACCAAAATATCAATTCTGATTATTATTCCCATGTTGCAAA
TAACACACCAGCAAGTCGGGCGTACCTACTTTTTGTTCGATATTGCTTCTTTGCGCATGTGGTTTCCGTGGAGCAAGTAA
TAAATGTTTCAGAGGGCTAGACCAGTTTCTGTGTATATT-AATCACTGCCAGACTACTC---------------------
-----------CCACTAATTGATCTAACAATGATTTCTCGCTAAATTTGGTATGAC------------------------
CTAGTATCCTGTCAGCAAGAACGACAAATCTGTGGCCTTGCAGTTTTTGTTGTACTGTTGGCTAGCCAGTGACAT-----
--------------------------------------------------------------------------------
---------------------------------------------------------TGCTTGCTATCTGAAACTCTTTG
TAGGTATAAGGTGTAAAAACCAAGTA---------------------------GGAGTGCCATGGTTTATCTTTGACTTG
CTGAAATGAGAAGTGCATTAACAAAATCACGCTTCACACTCGGTGCGAAAAATTGCCGCATTTGGATTCTGTTCAGCATA
CCTCAGTTTTTTGCTCTTTGCTTATGCAAACCTCCTACGTTTTTTTCCCCATTACGCAATTATGCATACAGGCAAATAAC
ACGATTTTTTTCCCCATTGTTTTGTGCAGCAGGGGGGAACGGGTGAGTCGCCAGCCGATGCGTACCCTGACCTGGCCAAA
CTAATCCTTAACCGATGACTTGGCCATCCCGCTCTTCCCTGCAAACGCCGTTGCGCAGGAGACCCGGCTATCGTTCAACC
CCCATTAACCCCCCCAAAGAGAATGCTATTCTTCAGCCCCCTTTAACCTCCACGGATGGCGGCTTGGCTCGCGGAAAGCC
TGCGGAGTTGTCTGTCGACCGTTTAGAACAGAGTTTGGTGTGGCCTCCGAAGCGTTGATGTGATTTTGGACATGGTTTGT
GTCGCGGGGAGGGCTTGGTGCCGAAAGGCGGATGTAA-TTCTGGGCGTGGT-----------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TTCGCT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>chr1A_4120
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------GAAAGCC
TGCGGAATCGTTTGTCGATCGTTTAGAACAGAGTTTGGTGTGGCCTCCGAAGCGTTGGTGTGATTTTGGACATGGTTTTT
GTTGCGGGGAGG-CTTGGTGCCG-AAGGTGGATGTAA-TTTTGGGTGTGGT-----------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TTGCTCTGTCTGCAATGTAGGATCT
ATTGTTGAGCCTATGTAGTGCCGTGCAATGTTGTTCCCTACCGGTCGAGATCTTCGTCGTATGTTCAGTTCATAGCCATT
TCGCCCGCTTGCATCTGTTTATGGCTAATGCCACCATACTTGTGTCGTGCCACACTTTTGTAGTAGCATATAAATTTGTG
TTATGCTTT-GCCAAAATGGTGACCAGCCTTTTGTTGTTCATATAT-------------GTTGATCGTTTGATCTGCAAG
AACGGAATCTCCAGGGAAATCGTTCTGCCACTCTGTTTGGAGGGAAAATTTCATCGGCACGGACATCTTGGTAAAAATTA
ATTTTTGTTTTTGTTCTTGTGTCGTCAAGCACTCTCTGGTTCAAAATTCATGTGGTTTTCTAAATCGTATTGAGATCCAC
TTCGATCATGTG-----TTCTTTATATTCACGCGTGTTAAAAATCCC----GCGAAACAAAATGGCCATTATCGAAAAAC
AAGATTTCCTTTT--------------------------------------------
>SNPs
-----------------------------S-------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----SS----------
---------------------------------S-------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------S---SSS----S--------S------S-----S--------
---------------S--------S------------SSSSSSSSSSSSSS---S----------------------SSS
------------------S---------------------S-----S----------------S----------------
--------------S----------S-------------------------S----------------------------
--------------------------------S---S-------SS----------------SS------S---------
---------S----------------S--------S----S--------------------S---------S--------
--SS------SSSSSSSSSSSSSSS-----SS-----SS-----------S---S------SSSSSS-SSS--SS-----
-----------------------S------------S--S-S------------------------S---S---------
-----------SS-------SSSS------------------S--------S-----S-SS---S----SSSS--S-SS-
SSSSSSSSS---S--S-------SS-------SS----------------------------------------------
----------------------------------------S--------------------SS----------------S
--SS----S-------------S-----------S-----S---------S-S------------SS--------S----
-----------------------S--------S---------------------S-------------------S-----
--SS---S-------------------S----------S----------------S-------------------SSSSS
-------S---S--S-----------------S-------------S-------S--S-S-----------------S--
------------------S-------S-S------S------------------------S---------S---------
--S-------S-----------------------------SS-----------S------S-------------------
------SSSSSS--S-SSS--SSS----S---------S----S-------------S---------------S------
---------S-----------SSS-------S----------------S--------------S----------------
SSS------S-------S--S--S--S------------S-----------S----------------------------
-------------------------------------------------S------------------------------
----------------------------------S-S-SSS-SSS------------S---------S------------
----SSSSSSSSSSSSSSSSSS---------S------------S------------------------SSSSSSSS---
---------------------S---------------SSSS----S-------------------------------SSS
S------------------S-S-SS-------------S-S---------------------------------------
--------SS-------S------------------------------S-------------------------------
--------S-----S---------------------------S-------------------------------------
----------------------------------------------------S-----------------S---------
-----------S---------------------------------------S-----------------S----------
S-----------S--------------------------------S----------------------------------
---S------------S-----S----------------S------------S----------S---------S------
------------------------------------S-------------------------------------------
--------S----S-----S---S------------------------------SSS-----------------------
---------------------S---------------S-S-------------------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS-------------------------------------SSS-SS--SSSSSSSSSSSSSSSSSSSSSSSS
---------------S-----------------------S------------S-----S--S---------S--SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------S--S---
------------------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--------------------S
------------S-----------------S---S--S------------------S--------S--------------
--------------S---------S---------S----SSS--S-----------------------------------
------S-SS--------------S----------------S-S----S------S------------------------
-----S-S--------S-S-----S----------------S-----S-----S----S----S-------S--------
---------S-----------------S-----S--S----------S----S-------------------S-------
--------------------------------------------------------------------------------
-------S----------------------------SS-----------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------------------
--------------------------------S-----------------------SS---------------S------
--SS-SSS----------------------S--SSS----S----SSSSS-SSSSS-S-S-SSSS-------SS------
---------S------------S----S------SS---S--S-SSSSSSSSSSSSSSS--------------SS-S---
S----S-----S-------------------------------S----S-------S--S----S-----------S-SS
S----------SSS-S--S----------------------SS----------S------------S--SSSSSSS-S-S
S-SSS---SSSSSSSSS----------S-SSS---S-------SSSSSSSS------SS---S----------S----S-
---S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_896
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GGTT
GGTGTGTCCCACTTCA----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_2167
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GCCCGTTTTTCCCTCAACAA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>forward_2071
--------------------------------------------------------------------------------
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---------------------------------------------------CTGCTGGTATCAAAAGCGCC---------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>reverse_3662
--------------------------------------------------------------------------------
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-------------------------------------------------------------ATAGCCAGTGTCAGGCAAC
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>forward_3384
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----ACACTAGCATGTCGGACGTC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>reverse_4768
--------------------------------------------------------------------------------
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-----------------------------------------------GTGCCATGCTCTTTTTGCCA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
