>input_sequence_25664
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---------ATGATCTACCGGAGCTGGTCGCTGCTCTCGTCGACGGTGGCGATCTGGGGCGGTGCCGCCGCCGCAGGGCT
CGCCGTCGTCTCCCTCTCTGGCGGCAAGGTGCCTTCTCTCGCCATCTCCTCGTT---------GGGCATAAACTGTAGGG
ATCCGTCCGTACCCAA-TCTAGGCGACGCTTCACTGTCAATTTATTGTTGAGATCTTTATGTTTTCATCCGAATCGTCCG
TTCTTGATTGAATTCGGCGCCAACGTAGAGCGACCCATCCATGGTCCTATTGGGATTCCTCCGCCCCGAACGGAAACGGA
GGCTTCGCGCGTGTTGGCCCCAAGCACGGACTAAATGGTTAGCCGTTGTGATAGCACCAGGTAGTAAGATGTCAGGTAGA
AAGGGAGTCGATGTAACTAGTATAAAACGATTTTGTGTTTTCCAATGGCATATCATCCGACATGGAATCATTCAGTGCAG
AATTTAGAATAGCTGGAAC--GAGAGGCTCTTTTCAAAGTCGAGGACCCAGTTGATAAAACTGAAGAAATGTTGAAGTTT
TCCTGCAAGCGTACCATTAGTTCAAGGGTCGAGTTGATAAAACTGAAGAAATGTTGAAGTTTTCCTGCAAGCGTAGCATT
AGTTGAGTAATATGCGACTTGATTGCACAATCAGCGACAGATCAAGAGTGTAGAGGAACCTATGTCATCATGTTTTTT-T
ATCATAATCGTTCCCTCGAATTAACCTTTTATATGTGATTCTTTTGGCTCTTAGATGCTTTGGTATTA------------
-------------------------------ATTTTCAATGAGTATGAACCTACCAGACTCTGCCTACACGGATCACGGA
ATGGACATTTTTGCGCGTGTTGCTGGGGGGTTAATAACTAACAATCTTTGCATGATATTATGGCGCAAATCAGTTGGTCT
TTCTCAT---------AAGAGTTGGCCAAAAGTTGATAATCTGCTGGCCTTGTCCATATGGACTTCGAATGTCGAGTTGA
ATGCCTTTGTATTGCATTCTTATCTCCGACAAGTATATAAGCATAACTTTGGATGTCTTGTAGATGTAGAACACACACAA
GCTTTACTCCTTGTTAGGTTCTTTCCATGCTTATTATTGGAGCTCTTTTAGTGCTATATGGAGTTGACTAGGATCCACAT
ACAGACAGTTTATATGGATTCGAAACAGAGAAATGGTAG---GATATCGTTAATTTTAAAATGATGGGCCAATGAAGGAG
AGGCATCCTGGTATAATGCTTCTGCCTCTCCCTGGCAAATGCCACATTCCACCCAAAACTATGAACCGGGTGTGAGCTTT
TATATCACCCTTTTTTTTTCCTTTACATATTGGATGAAAGTGGAGGCGCATTTGTTTCTCCTTCGAAAGCTAAGCATATG
CTTCAACCCTTCTTTTTTTTTACTTAATCTCTTATCATTACCTTTTTGGGCCTTAAACATTTATACGTTTTTATTGTGCA
TGGTAAGATTTGCAGATAGCTAAAAGGTTCAATTCTGAGGTTCTAAAATTATTGTTCATTAGACTCATTA-------CCC
AAAAAAAGTAAAAGTAATGTTCATTTTGTCTGAGTTGTAGAGATGGTATGTACTGGGATGATAGAACCTGATTGAGAAGT
TTGCTTAGGTAAATAGCAGAGGTGGTGCACTAAGAAATTTGTTTGGTATGTTGTTGTTGCGGGATTGGGGCTATGGTTAC
AGGGACATCATCACT---TTTGTGTTACTTCCCTT-AATGGACCTTTTTATGTATAGTATATTTTTGGCCCTTAGA----
---------TATACCCATCAGGTAAATCTTCTGTTCACTGTGATATAA--ACTTCAGATAATCGTCAGGGAATGGGTCTC
AGAAATGAAAATTTGCTAATGATAACTTCATATAATCTTCAGGTAGTATTGCTAAGTCAGCTTCTTGCACCATCCTATAA
CTGACACATGCTAAATTGCACCCAAAGTTGAAAATTGGACTGAGTTGTACCTGTACATCATCTTCTTTGGCCCTTAAAAA
TCTACTATTTGCCAGTCCAAAAGTAGGATGGGTAAAGTAAACCTTGGATGAAAGTGAAGGGAACCAATTATGTGTTTTTC
TTTTCTCCTGTCAAAGCAAAGCCATACACTTCCGCCATTTGTTTTTATTTAATTACATCTGCTAACACTTTTTTTACCCT
TATAAACATGCTTATACATTGTTTGATTGTGCACGATGACTCTGTGAGCTTTGAGGATTAGCCAAAAAGTTCCTCTGGTG
--ATGGTTCTACAAAAGAAGGTTCATTATGTGTGAGTTGTAAAGATGCTAGCAGTAGCACAGCACAGCACAAGGAAGATG
GAGACTGGTTGAGAGGTATATTTAGGTAAAT-AACCGAGATGACGCACTGAGGAATTTTTTGGGTAGGATGCGTTGTCAT
TCTGAGGTTGGGGGTACGCTTCCAGACGAATGGACCCATGATTACTTTACTCGGATGAATCCTGGAATGCAACCGGTAGT
GTTAGTATATTATGGTCATGTTCTGCTAGGCAACATCAACATTAACTTTGCTGTCAAGCCTTTCCTGTTAGGTTATCAAT
GCGTTCCTTGTGGTTGACAGGGACACTTGAACCAGATTCGAAATGCAAGCTTTAGTTAATGGACCACATGTCCACATGTA
GTGTGTTAGTTAGTTTACTGTTCTGATAG--------------TTAATCGTGGTGTCTCACACGCTGAACCAATTGGAAG
GATAA-CAATCGCACCTGCTATATATGTTCTGATAGTTAACTGGTTTGGTGGGTCTTCTAGAATGGCCAATTTAAAAAGG
CTAGCAATCGCACATGCTATATATGTTCTCGTTCCACCTTTGGTCG-AATTTTTCTCGTATACGCAGTTATCGTTGATCT
CCGTGCTTCCCCTTCCTGTACTGACCATCCGCTCCAATCTCGCAGGAAAAGTTTCAGGACTACCTGTGCCGCGAAGGCGA
TAGGCTGAGGCGGCAGGACAGGGCCACCATGGCCAGCGCCAACTG----A------------------------------
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>chr5A_1_TraesCS5A01G321600
AAAGTGTTAAATGTGTATAGAAAAAATGTTGACCATGCATTTTAGAAAAAGTTCAACATTTTTTTTTGAAAATTTTCAAT
CAAGTATTTAAA---TTTTTTAAAATGTATACAAAAAATTTAATTATATATTCAATAAATGTTAATCTTGAATTGGAA-A
ATGTTAATAAAGCATTTTGAAAATGTTGAAAAATGTGTATAGAAAAAATGTTGACCATGTGTTACAAAAATATTTAATTT
GTTTTGATAAAATGTTGGACGTGTATTACAAAATTGTTGTTGATGTATACGAAAAATGTAGAATAATAACCAAAATAACA
AAGAAAACCG-AAAAAAGAATCAAAATAAACAAAAGGAAAAGTAAAATAGAAAAATGAAAAAAA----------------
------AATTGAAGAAT-AAAAAAGAAAAGAAAAGAAACGAAAAAA-----------TTGACTATGTATCAAGTAGTCCG
CGCCTCCTCTGTAACCATGAACGGAGAAAGTAACAAGAAATAAGAAAAAGG-TGGAGAAATAAAAAAACTCTGTACCTCA
AGTAGTCCGCGCCTCCTCAGTGTCCACGAACACAACAATTGTGCGGTGGCTAGGAGCTCGTCGCGCTGGGGAAGCGACGT
GGTATCGAATTCCCGCTCACCCCAATTTTTCCTTCTAATTTTTCTATTCTTTGTATGTGCTGATGACCAGACTGCTAATT
TTTCTATTCTTTATATGTGCATAATGTGCATATGGGCCGGGCCGATTACTCCAGACGTTTGAGCGAGAGAACAATCCGTG
TCGCTTAATGCGAGATATAGCTCCCATGGTCAAATAGGATA----TTTCCCTCTTAGATAGAGCTCATCTATGCGGGCCG
TGAAACTCCGAACAAGAGATGTGGCCGAGGCAGAAAAT-ACGGAGTGGTGGGCTGTGAGCCTGAATGGCTTCGTGCCCAG
CCGCCATTATTAGGCCTCCTGCAATCTTGTCTCGAAA--AAGGAAAAGATTAGGCCTCCTGCAATCTGGAGTTGTG--AA
GGCGGCGGGATGATCTACCGGAGCTGGTCGCTGCTCTCGTCGACGGTGGCGATCTGGGGCGGTGCCGCCGCCGCAGGGCT
CGCCGTCGTCTCCCTCTCTGGCGGCAAGGTGCCTTCTCTCGCCATCTCCTCGTT---------GGGCATAAACTGTAGGG
ATCCGTCCGTACCCAA-TCTAGGCGACGCTTCACTGTCAATTTATTGTTGAGATCTTTATGTTTTCATCCGAATCGTCCG
TTCTTGATTGAATTCGGCGCCAACGTAGAGCGACCCATCCATGGTCCTATTGGGATTCCTCCGCCCCGAACGGAAACGGA
GGCTTCGCGCGTGTTGGCCCCAAGCACGGACTAAATGGTTAGCCGTTGTGATAGCACCAGGTAGTAAGATGTCAGGTAGA
AAGGGAGTCGATGTAACTAGTATAAAACGATTTTGTGTTTTCCAATGGCATATCATCCGACATGGAATCATTCAGTGCAG
AATTTAGAATAGCTGGAAC--GAGAGGCTCTTTTCAAAGTCGAGGACCCAGTTGATAAAACTGAAGAAATGTTGAAGTTT
TCCTGCAAGCGTACCATTAGTTCAAGGGTCGAGTTGATAAAACTGAAGAAATGTTGAAGTTTTCCTGCAAGCGTAGCATT
AGTTGAGTAATATGCGACTTGATTGCACAATCAGCGACAGATCAAGAGTGTAGAGGAACCTATGTCATCATGTTTTTT-T
ATCATAATCGTTCCCTCGAATTAACCTTTTATATGTGATTCTTTTGGCTCTTAGATGCTTTGGTATTA------------
-------------------------------ATTTTCAATGAGTATGAACCTACCAGACTCTGCCTACACGGATCACGGA
ATGGACATTTTTGCGCGTGTTGCTGGGGGGTTAATAACTAACAATCTTTGCATGATATTATGGCGCAAATCAGTTGGTCT
TTCTCAT---------AAGAGTTGGCCAAAAGTTGATAATCTGCTGGCCTTGTCCATATGGACTTCGAATGTCGAGTTGA
ATGCCTTTGTATTGCATTCTTATCTCCGACAAGTATATAAGCATAACTTTGGATGTCTTGTAGATGTAGAACACACACAA
GCTTTACTCCTTGTTAGGTTCTTTCCATGCTTATTATTGGAGCTCTTTTAGTGCTATATGGAGTTGACTAGGATCCACAT
ACAGACAGTTTATATGGATTCGAAACAGAGAAATGGTAG---GATATCGTTAATTTTAAAATGATGGGCCAATGAAGGAG
AGGCATCCTGGTATAATGCTTCTGCCTCTCCCTGGCAAATGCCACATTCCACCCAAAACTATGAACCGGGTGTGAGCTTT
TATATCACCCTTTTTTTTTCCTTTACATATTGGATGAAAGTGGAGGCGCATTTGTTTCTCCTTCGAAAGCTAAGCATATG
CTTCAACCCTTCTTTTTTTTTACTTAATCTCTTATCATTACCTTTTTGGGCCTTAAACATTTATACGTTTTTATTGTGCA
TGGTAAGATTTGCAGATAGCTAAAAGGTTCAATTCTGAGGTTCTAAAATTATTGTTCATTAGACTCATTA-------CCC
AAAAAAAGTAAAAGTAATGTTCATTTTGTCTGAGTTGTAGAGATGGTATGTACTGGGATGATAGAACCTGATTGAGAAGT
TTGCTTAGGTAAATAGCAGAGGTGGTGCACTAAGAAATTTGTTTGGTATGTTGTTGTTGCGGGATTGGGGCTATGGTTAC
AGGGACATCATCACT---TTTGTGTTACTTCCCTT-AATGGACCTTTTTATGTATAGTATATTTTTGGCCCTTAGA----
---------TATACCCATCAGGTAAATCTTCTGTTCACTGTGATATAA--ACTTCAGATAATCGTCAGGGAATGGGTCTC
AGAAATGAAAATTTGCTAATGATAACTTCATATAATCTTCAGGTAGTATTGCTAAGTCAGCTTCTTGCACCATCCTATAA
CTGACACATGCTAAATTGCACCCAAAGTTGAAAATTGGACTGAGTTGTACCTGTACATCATCTTCTTTGGCCCTTAAAAA
TCTACTATTTGCCAGTCCAAAAGTAGGATGGGTAAAGTAAACCTTGGATGAAAGTGAAGGGAACCAATTATGTGTTTTTC
TTTTCTCCTGTCAAAGCAAAGCCATACACTTCCGCCATTTGTTTTTATTTAATTACATCTGCTAACACTTTTTTTACCCT
TATAAACATGCTTATACATTGTTTGATTGTGCACGATGACTCTGTGAGCTTTGAGGATTAGCCAAAAAGTTCCTCTGGTG
--ATGGTTCTACAAAAGAAGGTTCATTATGTGTGAGTTGTAAAGATGCTAGCAGTAGCACAGCACAGCACAAGGAAGATG
GAGACTGGTTGAGAGGTATATTTAGGTAAAT-AACCGAGATGACGCACTGAGGAATTTTTTGGGTAGGATGCGTTGTCAT
TCTGAGGTTGGGGGTACGCTTCCAGACGAATGGACCCATGATTACTTTACTCGGATGAATCCTGGAATGCAACCGGTAGT
GTTAGTATATTATGGTCATGTTCTGCTAGGCAACATCAACATTAACTTTGCTGTCAAGCCTTTCCTGTTAGGTTATCAAT
GCGTTCCTTGTGGTTGACAGGGACACTTGAACCAGATTCGAAATGCAAGCTTTAGTTAATGGACCACATGTCCACATGTA
GTGTGTTAGTTAGTTTACTGTTCTGATAG--------------TTAATCGTGGTGTCTCACACGCTGAACCAATTGGAAG
GATAA-CAATCGCACCTGCTATATATGTTCTGATAGTTAACTGGTTTGGTGGGTCTTCTAGAATGGCCAATTTAAAAAGG
CTAGCAATCGCACATGCTATATATGTTCTCGTTCCACCTTTGGTCG-AATTTTTCTCGTATACGCAGTTATCGTTGATCT
CCGTGCTTCCCCTTCCTGTACTGACCATCCGCTCCAATCTCGCAGGAAAAGTTTCAGGACTACCTGTGCCGCGAAGGCGA
TAGGCTGAGGCGGCAGGACAGGGCCACCATGGCCAGCGCCAACTG----ATGGACCATGAAAGAAAGCGCCGCGGAGACG
AAGAAACGAGCATTTCATCATATATCCGCATCCGTGAAGGCGTCGTCTTGGTCCAATAATCCTTGTTTGCCGTGCTTTAA
ACATGGTGTGGTCTGGTGTCCTCATCGAATCCAATAGTCTTTGCTCGACATGATGTGGAACTTGGTACGGCCTGATGAGC
TTCGCTTTCCGGCTTGCCAAGTGGCTCGAAACGTTGTCTTCGCAACAATTTTTTTGTCCTTGTCAGCGAACAATCTTTGT
CCCATTTTGGATTTGATCACTGTTTCGGATATGTGTGAATAATAAACACCG-------TGGGATCCAGTTG-----AAAT
CCACTTGGCTGTT-----TGGATACTGGGCAGTGATG---TTTTTATTTCTGGAGAGCTTCAGTATCTTTTTTGGGATTT
ATAAACTCAAACTCTTGGTATACAGTACTCCCTCCGTTCTAAAATAAATGACTCAAAATTAGTATAAAGTTGAGTCATCT
ATTTTAAAATAAAGGGAGTAATAATTACACACATCCCAACAGGCCCCAACAACCATATCAAGAAAGGGAAAAC-AAACAG
GCCCTGCTAACATTTTAAAATCCGCCTGGAATTGGTCGGAACTTGCCGCCTCAGGCTCAGAGACGACCCCAGCAGCCAAG
ACTTCATATTCTTCTAGGAGTAC--CAGAATCTAACCGCATCGTCTGCATCTGAATCTG------ATTTGTTTGTTGCGT
TGCGAATCATTGCCGTGATCTTTGTGAACAGGTCTCGCTTGCGGCGGAGGATAAGCAAGCACGGCCTTTTTAGAATGATT
ACTAATCTAATCTACTAGTCGTTGGATCCATGCATGCATCCCACGGTGGCACGCTCCCATCTGATCTGGCCGTGGACCTG
GCCGGGTCTTCGCCGTGCGGCCGACGCGACGGAGCGTCAAGTCGCCGGGATCCATCCATCGCCGGTGCTCATCCAAAGAT
CCATGATGTATTTTTTTGTTAATAAAATAAAGCTGTTGA
>chr5D_1
AAAGTGTTAAATGTGTATAGAAAAAATGTTGACCATGCATTTTAAAAAAAGTTCAAGC-TTTTATTTGAAAACTGTTAAT
CAACTATTTAAAAA--TGTTTAAAATGTATATAAAAAATTTAACTATGTATTCAATAAATGTTAATTTTGAATTGGAA-A
ATGTTAATAAAGCATTTTGAAAATGTTGAAAAATGTGTATAGAAAAAATGTTGACCATGTGTTACAAAAATATTTAATTT
GTTTTGAGAAAATGTTGGACGTGTATTACAAAAATGTTGTTGATTTATACGAAAAATGTAGAATAATAACCAAAATGACA
AAGAAAATTGAAAAAAAGAATCAAAATAAACAAAATAAAAAGTAAAATTGAATA---------AATGAAGAAACAAAAAA
ATGAATAATTGAAGAAT-AAAAAAGAAAAGAAACAA----AAAAAA-----------TTGGCTATGTATCAAGTAGTCCG
CGCCTCCTCTGTAACCACGAACGGAGAAAGTAACAAAAAATAAGAAATAAAATGGAGAAATAAAAAAACTCTATACCTCA
AGTAGTCCGCGCCTCCTCTGTATCCACGAACACAACAATTGTGCAGCTGCTAGAAGCTCGTCGCACCGTGGAGGCGGCAT
GGTATC-AAACCCCACGCACCCCCATTTTTTCTTTCTTTTTTTCTATTCTTTGTATGTGCTAATGGCCGGACTGCTAATT
TTTCTATTCTTTATATGTGCTTAAGGGCCGAC---------CCGATTACTCCAGACGTTTCAGCTAGAGAACCATCCGTC
TCGCTTAATGCGAGATATAGCTCCCGCGCTCAAATAGGATTTTTTTTCCCCTCTTAGATAGAGCTCATCTCTGTGGGCCG
TGAAACTCCGAACAAGAGATGTGGTCGACGCAGAAAATAACGGAGTGGTGGGCTGTGAGCCTAAACGGCTTCGTGCCCTA
CCGCCATTAGGCCTCCTGCTGCAATCTTGTCTCGAAAGAAAA-AAAAGATTAGGCCTCCTGCAATCTACAGACTAGACAA
GGCGGCGGGATGATCTACCGGAGCTGGTCGCTGCTCTCGTCGACGGTGGCGATCTGGGGCGGTGCCGCCGCCGCAGGGCT
CGCCGTCGTCTCCCTCTCTGGCGGCAAGGTGCCTTCCCTCGCCACCTCCTCGTTCTAATTTTAGGGCATAAACTGTTGGG
ATTCATCCATACCCAAATCTAGGCGACGCTTTGCCGTCAGTTT-TTGTTGAGATCGTTATGTTTTGATCCGAATCGTCCG
TTCTTGATTGAATTCGGCGCCAACGTAGAGCGATCCATCCACGGCCCTATTGGGATTCCTCCGCTCCGAAAGGAAGCGGA
AGCTTCGCGTTGGC---CCCCAAGCACTGACTAAATGGTTAGCCATTGTGATAGCACCAGGCAGTAAGATGTCAGATAGA
AAGGGAGTCGATGTAACAAGTATAAAACGATTTTGTCTTTTCCAATGGCATATCATCCAACATGTAATCATTTAGTGCAG
AATTTAGAATAGCTGGAATG--AGAAGCTCTTTTCAAAGTCGAAGATCCAGTTGATAAAACTGAAGAAATGTTTAAGTTT
TCCTGCAAGCGTAGCATTCGTTCAAGGATCCAGTTGATAAAACTGAAGAAATGTTGAAGTTTTCCTGCAAGCGCAGCATC
AGTTCAGG-ATATGTGACTTGATTGCACAATCAGCGACAGATCGAGAGTGTAGAGGAACCTATGTCATCATGTTTTTT--
ATCATAATCATTCCTTCAAATTACCCTTTTATGTGTGATTCTTTTGGCTCTTAGATGTTTTCGTATTATATGCGGATGAG
GTAAATCTCCTGTTCACGAAGGTAACAGATAATCTTCGATGAGTATGAACCTACCAGACT--------------------
-----------------------------------------------------------ATGGTGCAAATCATTTGGTCT
TTCTGAATACCGATTAAAGAGTTGGCCAAAAGTTGATGATCTGCTGGCCATGTCCATATGGACTTCGAATGTCGAGTTGA
ATGCCTTTGTATTGCATTCTTATCTACGACAAGTATATAACCATAACTTTGGGTATCTTGTAGATGTAGAGCGCATACAA
GCTTTACTCCTTGTTAGGTTGTTTCCATGTTTATTATTGGAGCTCTTTTAGTGCTATATGGAGTTGACTAGGATCCACAT
ACAGACGGTTTATATGGATTCGAAACAGGGAAACGATAGGACGATAGCGTTAATTTAAAAACGATGGGCCAATCAAGGAG
AGGCATCCTGGTATAATGCTTCTGCCTCTCCCTGCCACATGCCACATTCCACCCAAAACTATGAACTGGGTGTGAGCTTT
TATATCACCCTTTTTTTTGCCTTTCCATATTGGATGAAGGTGGAGGCGCATTTGTTTCTCCTTACAAAGCTAAGCATATG
CTTCAACCCTTCTGTTTTTTTACTTAATCTCTTATCACG--------GGGCCTTAAACATTTCTACGTTTTTATTGTACA
TGGTGAGATTTGCGGATAGCTAAAAGGTTCAGTTCTGAGGTTCTAAAATTATTGTTCATTAGATTCATTAGTCATTACCT
AAATAAAGTAAAAGTAATGTTGATTTTGTCTGGGTTGTAGAGATGGTATGTACTGGGATGATAGAACCTGATTGAGCGGT
TTGTTTAGGTAAATAGCAGAGGTGGTGCAATAAGAAATCTGTTTTGTATGTTGTTGTTGCGGGATTGGGGTTATGGTTAC
AGGGACATCATCACT---TTTGTGTTACTTTCCTCAAATGGACCTTTTTATGTATAGTATATTTTTGGCACTTAGATGTT
TTGATATTGTATACGCACCAGGTAAATCTTCTGTTCACCGTGATATAACAACTTCAGATAATCGTCAGGGAATGGGTCTC
AGAAATGAAATTTTGCTAATGATAACTTCATATAATCTTCAGTTAGTATTGCTAAGTCAACTTCTTGCTCCGTCCTATAA
CTGACACATGCTAAATTGCACCCAAAGTTGAAAATTGGACTGAGTTGTACCTGTACATCATCTTCTTTGGCCCTTAAAAT
TCTACTATTTGCCAGTCCAAAAGTAGAATGGGTAAAGTAAACCTTGGATGAAAGTGAAGGGAACCAATTATGTGGGTTT-
TTTTCTCCTATCAAAGCAAAGCCATACACTTCCGCCATTTGTTTTTGTTCAATGACATCTGCTATTACGTTTTTGACCCT
--TAAACATGCTTATACATTGTTTGATTGTACACGGTGAGTCTGTGAGCTTTTAGGATTAGCCAAAAAGTTCATTTGGTG
TGATGGCTTTACAAAAGAAGGTTTGTTATGTGTGAGTTGTAGAGATGCTAGCAGTAGCACAGCAC-----AAGAAAGATG
GAGCCTGCTCGAGAGGTATATTTAGGTAAATAAACCGAGATGACGCACTGAGGAATTTTTTGGGTAGGATGTGTTGTCAT
TCTGAGGTTGGGGGTACGCTTCCAGATGAATGGACCCATGATTACTTTACTCGGATGAATCTTGGAATGCAACCGGTAGT
GTTAGTATATTATGGTCATGTTCTGCTAGGCAACATCAACATTAACTTTGCTGTTAGGCCTTTCTTGTTATGTTATCAAT
GCGTTCCTTGTGTTTGACAGGGACAGTTGAACCAGATTCGAAATGCAAGCTTTAGTTAATGGACCACATGTCCACATGTA
GTGTGTTAGTTAGTTTTCTGTTCAGATAG--------------TTAGTCGTGGTGTCTCACACGTTTAACCAATTGGAAG
GATAA-CCGA----------------------------------TTTGGTGGGTCTTCTAGAATGGCCAATTTTAAAAGG
CTAACAGCCGCACATGCTATATATGTTCTCGTTCTACTTTTGATCG-AA-TTTTCTCGTAGACGCAGTTATCGTTGATCT
CCGTGCTTCCCCTTCCTGTACTGATCATCCGCTCCAATCTTGCAGGAAAAGTTTCAGGACTACCTGTGCCGCGAAGGCGA
TAGGCTGAGGCGGCAGGACAGGGCCACCATGGCCAGCGCCAACTAACGAACGGACCATGAAAGAAAGCGCCACGGAGACG
AAGAAACGAGCATTTCATCATGTATCCGCATCCGTGACGGCGTCGTCTTGGTCCAATAATCCTCATTTGCGGTGCTTTAA
ACATGGTGTGGTCTGGTGTCCTCATCGAATCCAATAATCGTTGATAGACATGATGTGGAACTTGGTACGGCCTGATGAGC
TTCGCTTTCCGGCTTGTCAAGTGGCCCGAACCATTGTCTTGGCAACAATTTC---GTCCTTGTCAGTGAACAATCTTTGT
CCCATTTCGGATTTGATCACTGTTTCGGGTATGCGTGAA-AATAAACACCGTGGTCCGTGGGATCCGCTAAAATCCAAAT
CCAATTGGCTGTT-----TGGATACTGTCGGAT-ACGCTTTTTTACTTTCTGGCGAGCTTCAGTATTTTTTT-CCGATTT
ATAAACTCGAACTCTTGGCATAATACAG----------------------------------------------------
---------------------TACTTGCACACATCCCAAGAGGCCCCAACAGCCATATCAA-------------------
-------TAACTTTTTAAAATCCGCCTGGAATTGGTCGGAACTTCCCACCTCAGGCTCAGAGACGACCCCATCAACCAAG
ACTTCATATTTTTCTAGGAGTATATCAAAATCTAACCGCATCATCTGAATCTGCATCTG------ATTTGTTTGTTGCGT
TGTG-ATCATTGCCGTGATCTTTGTGAACAGGTCTCGCTTGCGGCGGAGGATAAGCAAGCAAAGCCTTTTTAGAATGATT
ATTAATCTAAT---CTAATCGTTGGATCTATGCATGCCTCCGACGGTGACGCATTCCCATCTGATCTGGCCGTGGACCTG
GCCGGGTCTTCGCCGTGCGGCCGACGCGACGGAGCGTCAAGTCGCCGGGATCCATC----GCCGGTGCTCATCCAAAGAT
CGACGGTGTTTTTT-------------------------
>chr1D_1
AAAATGTTAAATGTGTATAGAAAAAATGTTGAACATGTGTTAAAGATGTT----AATATTTTTATTAGAAAACTGTTAAT
CAGGCATTTAAAAAATTGTTAAAACTGTATAGAAAGATGTTGACCATGTGTTCAATAGATGTTAATTTTGTATTTAAATA
ATTTTAATCAGGGATTTGAATTATTTTCAAAAATGTTTATACAAAAAAGTTTGAGCATGTATTACAAAAATGTTTAATTT
GTATTGG--AAATGTTAGACGGGTATTAGAAAAATGTTGTTGATATATAC-AAAAATGTAGAATAATTACCAATTAAACA
AAGAAAGCCG--AAAAAAAAACAAAGTAAACAAAGGAAAAAATTAAAATGAAAAATAACAAAGAAACAACATGCAAAAAA
AGAGAAAAATGGAGAAGAAAAAAAGAAAAGAAACAA----AAGAAAACGAAAAAATGTTGACTATTTGTCAAGTAGTCCG
CGCCTACTCTGTAACCAAGAATGGA-------------------AAAAAAAAAGGAGAAATAAAAAA-------------
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>chr5B_818
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-------------------------------------------------------------AGCACATCTCTGTGGGCCG
TGAAACTCCGAACAAG-GATGTGGCCGAGGCAGAAAAT-ACGGAGTGGTGGGCTGTGAGCCTAAACGGCTTCGTGCCCCT
ACCGCC--ATTAGGCCTCCTGCAATCTTGTCTCGAAA--AAA-AAAAGATTAGGCTTCCTGCAATCTACAGACTAGACAA
GGCGGCGGGATGATCTACCGGAGCTGGTCGCTGCTCTCGTCGACGGTGGCGATCTGGGGCGGTGCTGCCGCCGCAGGGCT
CACCGTCGTCTCCCTCTCTGGCGGCAAGGTGCCTTCCCTCGCCATCTCCTCGTTCTAATTTTAGGGCATAAACTGTTGGG
ATTCATCCATACCGAAATCTGGGCGACGCTTTGCCGTCAGTTT-TTGTTGAGATCGTTATGTTTTGATCCGAATCGTCCG
TTCTTGATCGAATTCGGCGCCAACATAGAGCGATCCATCCACGGCCCTATTGGGATTCCTCCGCTCCGAAAGGAAACGGA
AGCTTCGCGTTGGC---CCCCAAGCAATGACTGAATGGTTAGCCATTGTGATAGCACTAGGTAGTAAGATGTCAGATAGA
AAAGGAGTCGATGTAACAACTATAAAACGATTTTGTGTTTTCCAATGGCATATCATCCAACATGGAATCATTCAGTGCAG
AATTTAGAATAGCTGGAATGAGAGAAGCTCTTCTCAAAGTCGAGGATCCA------------------------------
--------------------------------GTTGATAAAACTGAAGAAATGTTGAAGTTTTCCTGCAAGCATAAGATT
AGTTCAGGAATATTTGACTTGATTGCAAAATCAGTGACAGATCAAGAGTGTAGAGGAACTTATGTCATCATGTTTTTTTT
ATCATAACCATTCCCTCAAATTACACATTTATGTGTGATTCTTTTGGCTCTTAGATGTT---------------------
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---------------------------------------------------------ATGGACTTCGAGTGTCGAGTTGA
ATGTCTTTGTATTGCATCCTCATCTATGAAAAGTACATAAAAGTAACTTTGGATGTCTTGTAGATGTAGAGCACATACAA
GCTTTACTCCTTGTTAGGTTCTTTCCATGTTTATTATTGGAGCTCTTTTAGTGCTATATGGAGTTGACTAGGATCCACAT
ACAGACGGTTTATATAGATTCGTAACAGGGAAACGATAG---GATAGCGTTAATTTAAAAACAATGGGCAAATGAAGGAG
AGGCATCCTGGTATAATGCTTCTGCCTCTCCCTGGCACATGCCACATTCCACCCAAAACTATGAACTGGTTGTGAGCTTT
TCTATCACCCTTTTTTT-GCCTTTACATATTGGATGAAAGTGGAGGCGCATTTGTTTCTCCTTCCAAAGCTAAGCATATG
CTTCAACCCTTCTGTTTTTTTACTTAATCTCTTATCACCTTT--------------------------------------
--------TTTGCGGATAGCTAAAAGGTTCAATTCTGAGGTTCTAAAATTATTGTTCATTAGACTCATTAGTCATTACCT
AAAAAATGTAAAAGTAATGTTCATTTTGTCTGAGTTGTAGAGATGGTATGTACTGGGATGATAGAACCTGATGGAGAGGT
TTGTTTAGGTAAATAGCAGAGGTGGTGCACTAAGAAATCTGTTTGGTATTTTTTTGTTGCGGGATTGGGGCTATGGTTAC
AGGGACATCAGCACTTTATTTGTGTTACTTCCCTCAAATGGTCCTCTTTATGTATAGTATATTTTTGGCCCTTAGATGTT
TTGATATTGTATACGCATCAGGTAAATCTTCTGTTCACCGTGATATAACAACTTCGGATAATCATCAGGGAAAGGGTCTT
AGAAATGAAA-TTTGCTAATGATAATTTCATATAATCTTCAGTTAGTATTGCTAAGTCAGCTTCTTGCTCCGTCCTATAA
CTGACACATGCTAAATTGCACCCAAAGTTGAAAATTGGGCTGAGTTGTACCTGTACATCATCTTCTTTGGCCCTTAAAAA
TCTACTATTTGCCAATCCAAAAGTAGAATGGGTAAAGTAAACCTTGGATGAAAGTGAAGGGAACCAATTATGTGGTTTT-
TTTTCTCCTATCAAAGCAAAGCCATACACTTCCGCCATTTGTTTTTATTCAATGACATCTGCTATCACGTTTTTGACCCT
--TAAACATGCTTATACATTGTTTGATTGTACACGGTGAGTCTGTGAGCTTTTAGGATTAGCCAAAAAGTTCATTTGGTG
TGACGGCTTTATAAAAGAAGGTTTGTTATGTGTGAGTTGTAGAGATGCTAGCAGTATCACAGT-----ACAAGAAAGATG
GAGACTGGTTGAGAGTTATATTTAGGTCAATAAACCAAGATGACGCACTGAGGAATTTTTTGGGTAGGATGTGTTGTCAT
TCTGAGGTTGGGGGTACGCTTCCAGATGAATGGACACATGATTACTTTACTCGGATGAATCTTGGAATGCAACCGGTAGT
GTTAGTATATCATGGTCATGTTCTGCTAGGCAACATCAACATTAACTTTGCTGTTAAGCCTTTCTTGTTATGTTATCAAT
GCGTTCCTTGTGTTTGACAGGGACAGTTGAACCAGATTCGAAATGCAAGCTTTAGTTAATGGACCACATGTCCACATGTA
GTGTGTTAGTTAGTTTTCTGTTCAGATAGGTTTTTTCAGATAGTTAATCGTGGTGTCTCACACGCCGAACCAATTGGAGG
GATAAACCGA----------------------------------TTTGGTGGGTCTTCTAGAATGGCCAATTTAAAAAGG
CTAACAGCCGCACATGCTATATATGTTCTCGTTCTACTTTTGATTGAAA-TTTTCTCGTAGTCGCAGTTATCGTTGATCT
CCGTGCTTCCCCTTCCTGTACTGACCATGCGCGCCAATCTTGCAGGAAAAGTTTCAGGACTACCTGTGCCGCGAAGGCGA
TAGGCTGAGGCGGCAGGACAGGGCCACCATGGCCAGCGCCAACTG----ACGGACCAGGAAAGAAAGCACCACGGAGACG
AAGAAACGA-CATTTCATCATATATCCGCATCCGTGACGGGGTCCTCTTGGTCCAATAATCCTCATTTACCGTGCTTTAA
ACATGGTGTGGTCTGGTGTCCTCATCGAATCCAATAATCGTTGATCGACATGATGTGGAACTTGGTACGGCCTGATGAGC
TTCGCTTTCCGGCTTGTCAAGTGGCTCGAACCGTTGTCTTCGC-------------------------AACAATCTTTGT
CCCATTTTGGATTTGATCACTGTTTCGGATATGTGTGAATAATAAACACCGCGGTCCGTGGGATCCAGCTG-----AAAT
CCACTTGGCTGTTCTGTTTGGATACTGTCGGAT-ATG---TTTTTCTTTCTGGAGAGCTTCAGTATTTTTTTTCCGATTT
ATAAACTCGAACTCTTGGCATAATACAG----------------------------------------------------
---------------------TACTTACACACATCCCAACAGGCGCCAACAACCATATCAAGAAAGGAAAAATAAAACAG
GCCCTGCTAACTTTTTAAAATCCGCCTGGAATTGGTCGGAACTTCCCACCTCGGGCTCAGAGACGACCTCAGCAGCCAAG
ACTTCGTATTTTTCTAGGAGTATATCAAAATCTAACCGCATCATCTGCATCTGCATCTGAATCTGATTTGTTTGTTGCGT
TGTG-ATCATTGCCGTGATCTTTGTGAACAGGTCTCGCTTGCGGTGGAGGATAAGCAAGCAAAGCC-TTTTAGAATGATT
ATTAATCTATT---CTAATCGTTGGATCCATGCATGCGTCCGACGGTGACATGCTCCCATCTGATGAGGCCGTGGACCTG
GCCGGGTCTTCGCCGTGCCGCCGACGCGACGGAGCGTCAAGTCGCCGGGATCCATC----GCCGGTGCTCATCCAAAGAT
CGACGGCGTATTTT-------------------------
>SNPs
--------------------------------------------------------S------S--------S-S-S---
-----------------S-------------S-----------S---S------------------S-------------
--------------------------------------------------------------------------------
-------S-------------------------S----------S-----------------------------------
------------------------------------S-----------S-------S-S---S-----------------
---------------------------------SS-SSSS----------------------------------------
-----------------S------------------S------------SS---------------------S-------
------------------S--S----------------------S-SS-----S----------S-S-S---S---S-S-
------S--SS---S-S------S------S---SSSS-----------------------S---S--S-----------
--------------------S---S-SS-SSSSSSSSSSSS-------------------S---S-------S------S
-------------------------SS-S-----------S------S----------------------S--S------
--------------------------------------------------------------S--S------------SS
-----------------------------------------SS------------------------SS--SSSS-----
--------------------------------------------------------------------------------
------------------------------------S---------------------------------------S---
--S-S---S----------------------SS-S----S---S-----------S---------S--------------
---------------------------------S-------S--S-------------------S-----S---------
S--------SSS-SSSS----------S----------------S------------------------------S----
-----------------S----------------------------------------S---------------------
------------------S------S--------------------S--------------------------S------
-------------S----S--------S--S-------------------------------------------------
----S--S------S-----------------------------------------------------------------
---------S-------S-----S--------S------------------------S---S------------------
---------------------------------S---S----------------------SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S--------S-------
----S-S------------------------------S-----------S------------------------------
-------------------------S--------------S-----------------------------S----S----
-----------------------------S--------------------------------------------------
------S---------------------S----S-S----------S---------S----S------------------
-------------------------------------S----------------------------S-------------
------------------S---------------------------------------------S---------------
-------------S-----------------------SSSSSSSSSS---------------S--------------S--
----S--------S-----------------------------------------------------------------S
-----------------------------------------------------------------------------S--
---S----------------------------------S-----------------------------------------
----------------------------------S---------------------------------------------
--------------S-----------------------S-----------------------------------------
----------S-------------------------------S-------------------------S--S--------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------S----S
---------S---------------------------------------S---S----------S---S-----S-----
SS----------------------------S----S---S------------S-------------------S-S-----
------S-S--------------SS----------------S-----------------------SSS-----S------
-----------------------------------------------------------------------S--------
--------------------------S----------------------------------S------------------
------------------------------------------------------S---------S-----S---------
------------S------------S------------------------------------------------------
----------------S------S--------------------------------------------------------
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
---S--SS--------------------------S--S----S------S----------S-------------------
----------------------------------------S---------------------------------------
--------------------------------------------------S--------------------S--------
-------------------------------------S-------------------------SS---------------
------------------------------------S--S---S------------------------------------
----------------S-------------S--------------------SSSS-----------S-------------
--------------------------------------------------------------------------------
---------------------------SSSSS-S-----------S--------------------S------SS-----
--------S---------S---SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS--S-------------------------------------------S----S-------
-----------S--------------------------------S--S--------------------------------
----------S-----------S----S--------------S----------S--------------------------
--S-S--------------------------------------------------------SS-----------------
-S---------SSS---S-------------------S---S------S-------------------------------
--------------------------------------------------------SSSS--------------------
-S-S-S--------SSSSSSSSSSSSSSSSSSSSSSSSS
>forward_671
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CCCGCTCACCCCAATTTTTC-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>reverse_1922
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TGGACATTTTTGCGCGTGTT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>forward_1345
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CCTATTGGGATTCCTCCGCC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>reverse_3311
--------------------------------------------------------------------------------
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------------------------------GCACGATGACTCTGTGAGCT------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>forward_1941
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TGGACATTTTTGCGCGTGTT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------
>reverse_3582
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CTGGAATGCAACCGGTAGT
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>forward_1945
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----CATTTTTGCGCGTGTTGCTG-------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>reverse_3880
--------------------------------------------------------------------------------
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---------------------------------------ACTGGTTTGGTGGGTCTTCT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>forward_3428
--------------------------------------------------------------------------------
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------------------------------------------------TAGCAGTAGCACAGCACAGC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>reverse_4978
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------GTCGTTGGATCCATGCATGC-------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
