>input_sequence_25646
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--------------------------------------------------------ATGGTAGAGGAGAATCTTGAAGTG
GATGACTCGTCTTTGTCTTCACCAAAATCTGTGCAAAATTCATTAGAGCCTCAGCCAACTGAAGGCACTAATGAAGATGA
CAACAATAACCTTGAGAAAACAGCATGTGCCAATTTGGAGACACCAATGCACCAAGAACTTCCTGCAAGCTTGATATTGA
GTGACGAAGAAAGCAATCTGCAGGAGATTTCGGTTGAACAAAAGGCTCCCGTTGGTGATTCCATAATTGGTTCATCAGAA
GTGGACCACAGTGGGTTGCCATCAATCAAAGAAGATTCTCACAGTTTTCCATGTGCCTCTAACGAAGTTGATGAATCGAA
GGATGCCATCAGTGACTTGATGACAGTTCATACTTCAGAAGAAAACACACATGCAACGCCACAGACTTCAGTTAGCTCAA
GAGACGAGGTCCAATGTGCACCTTTGCATAACGCACAAGATGGTGCTTCCTGTTCTGATTCTGAGAAGACTGTTTGTGAG
GCGCCACCTGCTATCTTACAAAAGGTGAAAGAAGATAAACCACGGTTCATGCATAGATTGCCTGATCGCCAAATGAGCCT
ACGAGACACTAGACAGAAAATGCCTGCACCTGTGAGGAGATTGAACAGTGGGAATTATTCGAGGACCAGTAATTTTTTTG
TCGATACAACGAAGCCCATTGAATCAGTGAAGGTGGCTGCCTCAAGATTTGGTGGTAGCATCAACTGGAAAACACGCAAA
ACAGAACCAGTGCAGGTAACTCACAGCATACCTTCTCTTGTTTGTTACATTAAGTCTCTCAGCTACAACTTAATAAATTA
TCTTTCATTTGCATCAGCTACAACTTAATAATTCTCTCAGCTACAAGTTAATAAATTATCTTTCATTTGCATCAGCTACA
ACTTAATAATTCTCTCAGCTACAAGTTAATAAATTATCTTTCATTTGCATCAGCTACAACTTAATAATTCTCTCAGCTAC
AACTTAATAAATTATCTTACATTAATTCTCTCAGCCACAACTTAATTCTATCTTTTGTAGTTTTATTGAGACTTGCTTGA
GCACTTACAGACATATTTCTTTTTTACTTTCTCTATGTATGATTAACAATGTTGGTATATC-AGGTGGGTGACCATGTCA
AACTCGAGGTCGGTCTGCTGAAGAATGAAATTTCAGATTGCAAACAGCAAGCAGAAGCTGCAGGGGCTGCAAAGCTGTCT
GTATTCAATGAGATTGAGAGAACAAATAAGCTTATTGAAAACCTGAAACATGACCTGGAGAGGGCAGAACATGAAGAGGC
ACATGCCAAGGAGGATTTGGATTTCTTTCAATTTATTGTACCAGAGATGGAGGAAGGAGGAGCTAGCAATGATAGTGTTG
CAGGCGAGGAGATTTTGAAAAATATCCATGAACGGCACAAAGTACTGGTGTCCAAACTGAAGTTGGTCAAAGATGAGTTA
AAAGGGGTTCAGGAGGATTATGATTCTTTATTGATTGAACAGGACATTTCCATTGAAAAGTCTCAGGTAGCCATCATAGT
ATCCAAAGAGTCTGAGAAGCAAGCAGAGGATCTCACTGTAGAGTTGAACAAACTGAAGGAAGTGTTGGATTTGGCTCGTG
CCACGTGCCGTGATGCTGAAGAACACAAGGCGTGTGCCTCCTTAGCTCGAGATGAGGACCGTCTTAAATGGGAGAAAGAT
CTAGGGCAAGCAGAAGAGGAGCTGAGTCAACTCAACAAGAAGCTTTCCTCTGTTGAAGATCTGAAATCTGAGCTGGAAAC
ATCATCCAGCTTGCTGGTGAAGCGCAACGAAGAGCTAAATGCATATGTAGAGGCAAAGCTAATTAAAGAAGCACAAGAAC
AAGGAAACAGAACTGATGAGACCATGCAAGAAGAAACCATTCTTCTATCAAGAAATGAACTGGAGGAGCAGAAGAAGAGC
ATTGATAAGGCGAGAGATGAAGTCTGTGCCCTGACAGTTACTGCTGCATCTCTTCAGTCAGAGTTAAGCAAAGAGAAAGA
AGCACTTGCTACCATGCAGCAGCTGGAAGCAATGGCATCGATCACCATTTCTTCTCTCAAGGCGGAGATTAAGCTGGCAC
AACAGGAACTGGAGACAGTTCATGCCAAGGAGAAGAAAACCTGCGACAGAATGGGCGAGTTGCCTGGGCTTCTGCAAGTT
GCAGCCCAAGAAGCTGATGAGGCAAAGTCTCTTGCTATGAAGGCACATGAGATGCTAAGAACGAGCAAGGGGGAAATGGA
GCAAGCGAAGGCTGATCTGAGTGCTATGGAATTCAGGCTCCAGGCAGTCCTGAAGGAGACGGTAGCAGCGAAAGAGTCTG
AGAGGCTGTCACTTGATGCTCTCAGAGCTCTGGAGGAGAGCGAGCTTGCAGCAAGCAATACAGAACAAGGCTCTCCTGGA
ATGATCACACTCGACTTAAATGAGCACGCGTCTCTCATCGAGAAGTCCCATCAGGCAGAAGAGCTTTTGCACAAGAAGAT
ATCTTTTGCAGTTGCACAGGTTGAGATGGCCAAGGACTCCGAGTCTCTTGTCTTGGCAAAGCTCAGCGAAGTTTACAAGG
TTCTGGAAGAACGAAAGCAAGCACTGCTTGCTGCCCAAAAGCAGGCCGATGGTGCCACGGAAGGCAAGCTGGCCATGGAG
CAAGAGCTGAGGACATGGAGGGAGGAGCATGGGGAGCGTCGTAAGGCTACCGCTGAGGCTTTGAAATCTGGAACTAAACA
TTCAAATCCGATGGTTATTGTCGTTGAGCGCGATCGGGACACCAAGGGCACATGCAAAGAAGACAGCTGTGCCTTGGTTC
ACCCACTGTCCTCGGATATGTCAGCCAGGAGCAGCCCTGCCGGCCCAGGTTCGCGCGAGAAGGTGAAGAAGGCTAAGAAG
CCGCCGTTCCTCCGCCGTATGATGCTGTTCCTGTCCAGGAGGAGGCTCACAGCAGCGGCGTAA-----------------
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>chr4B_1_TraesCS4B01G300400
AGTGTACAAAAACTACAGGAAGAAATCAAACCAAATATTGCATTAGGGGAATAATTCCAAGTCTTCCCCACATATGAATA
TTTTTAAATTGATCCTATTCTCTACTCCCAGGTGGCTCTCCACTGTCCCAATTCTTTCAACCCTTCCTCCAGTGTTGTCT
CCCCAATACCTGCAAAAACTGCCCAAACCTTTT-CCCCATCTCCAGTCTCCTCCCCTCGTTTTGAAGATCCTTCATCCTT
CGATTACAAAAGATACAGGCACAAGGTCTCAACTCTTCAGTAAGTTTCAGCTTTTGCTTACTTTCTGATCACGCACATGG
CTTTCAGATACTGT--TATGTGTGGCTCAGTTGTAATCATGTTTTCCTTTCAA------CTTTTTTTCATTTCATGAGTT
CTTGAGTTTTA-TTTTTGGATATTTCTAGGATGTTTGCTTAGCTTGAAGTTGGATTATTTTGTTTAACCATGCAATTTGC
TTACATATGAAGACCTCAGTTCTTGACATAGATAAAGCAATATTGGTTTTACATGGATCGGAAATTAAACCAAAA-TTTA
GAGGTGTCCTGCAACTTGTTTGCATGTCCAGATCGTACTTTTTTTTTATGTCCAAGAACATTTAGCCAAAATAGTTATGC
TAGATGAACCTTTGCCGTGACAAATCATCAAGTCAATGTTTTGTGGCTTCTCAGATAGTTATGGTTGAAAAAAAGTACTA
CTTGGTTTGCTCTTATACCATGGATTTATCATCTATAAAGTCTTATCAAGTTCAAACCTTTCCTGAATGTTCTTGGATGA
GAACATCATATATGAAGA-----CCTTCATTGAAAAATCTGCATCTCAGGACTTCCCTTTGCTGAGTTTATTGTAGTTGT
GTGTGTGTGTTTCAATGGTTTACTTTATTTGGCAATTAAACTGGTACTCATACTTAGGTTTTTTCTGTTCCAGTTTAATT
CTCATCTTCAATGTTTTCTTCCACAGTTAATATAAAATTAAACAGTGACCGGAAGAATGGTAGAGGAGAATCTTGAAGTG
GATGACTCGTCTTTGTCTTCACCAAAATCTGTGCAAAATTCATTAGAGCCTCAGCCAACTGAAGGCACTAATGAAGATGA
CAACAATAACCTTGAGAAAACAGCATGTGCCAATTTGGAGACACCAATGCACCAAGAACTTCCTGCAAGCTTGATATTGA
GTGACGAAGAAAGCAATCTGCAGGAGATTTCGGTTGAACAAAAGGCTCCCGTTGGTGATTCCATAATTGGTTCATCAGAA
GTGGACCACAGTGGGTTGCCATCAATCAAAGAAGATTCTCACAGTTTTCCATGTGCCTCTAACGAAGTTGATGAATCGAA
GGATGCCATCAGTGACTTGATGACAGTTCATACTTCAGAAGAAAACACACATGCAACGCCACAGACTTCAGTTAGCTCAA
GAGACGAGGTCCAATGTGCACCTTTGCATAACGCACAAGATGGTGCTTCCTGTTCTGATTCTGAGAAGACTGTTTGTGAG
GCGCCACCTGCTATCTTACAAAAGGTGAAAGAAGATAAACCACGGTTCATGCATAGATTGCCTGATCGCCAAATGAGCCT
ACGAGACACTAGACAGAAAATGCCTGCACCTGTGAGGAGATTGAACAGTGGGAATTATTCGAGGACCAGTAATTTTTTTG
TCGATACAACGAAGCCCATTGAATCAGTGAAGGTGGCTGCCTCAAGATTTGGTGGTAGCATCAACTGGAAAACACGCAAA
ACAGAACCAGTGCAGGTAACTCACAGCATACCTTCTCTTGTTTGTTACATTAAGTCTCTCAGCTACAACTTAATAAATTA
TCTTTCATTTGCATCAGCTACAACTTAATAATTCTCTCAGCTACAAGTTAATAAATTATCTTTCATTTGCATCAGCTACA
ACTTAATAATTCTCTCAGCTACAAGTTAATAAATTATCTTTCATTTGCATCAGCTACAACTTAATAATTCTCTCAGCTAC
AACTTAATAAATTATCTTACATTAATTCTCTCAGCCACAACTTAATTCTATCTTTTGTAGTTTTATTGAGACTTGCTTGA
GCACTTACAGACATATTTCTTTTTTACTTTCTCTATGTATGATTAACAATGTTGGTATATC-AGGTGGGTGACCATGTCA
AACTCGAGGTCGGTCTGCTGAAGAATGAAATTTCAGATTGCAAACAGCAAGCAGAAGCTGCAGGGGCTGCAAAGCTGTCT
GTATTCAATGAGATTGAGAGAACAAATAAGCTTATTGAAAACCTGAAACATGACCTGGAGAGGGCAGAACATGAAGAGGC
ACATGCCAAGGAGGATTTGGATTTCTTTCAATTTATTGTACCAGAGATGGAGGAAGGAGGAGCTAGCAATGATAGTGTTG
CAGGCGAGGAGATTTTGAAAAATATCCATGAACGGCACAAAGTACTGGTGTCCAAACTGAAGTTGGTCAAAGATGAGTTA
AAAGGGGTTCAGGAGGATTATGATTCTTTATTGATTGAACAGGACATTTCCATTGAAAAGTCTCAGGTAGCCATCATAGT
ATCCAAAGAGTCTGAGAAGCAAGCAGAGGATCTCACTGTAGAGTTGAACAAACTGAAGGAAGTGTTGGATTTGGCTCGTG
CCACGTGCCGTGATGCTGAAGAACACAAGGCGTGTGCCTCCTTAGCTCGAGATGAGGACCGTCTTAAATGGGAGAAAGAT
CTAGGGCAAGCAGAAGAGGAGCTGAGTCAACTCAACAAGAAGCTTTCCTCTGTTGAAGATCTGAAATCTGAGCTGGAAAC
ATCATCCAGCTTGCTGGTGAAGCGCAACGAAGAGCTAAATGCATATGTAGAGGCAAAGCTAATTAAAGAAGCACAAGAAC
AAGGAAACAGAACTGATGAGACCATGCAAGAAGAAACCATTCTTCTATCAAGAAATGAACTGGAGGAGCAGAAGAAGAGC
ATTGATAAGGCGAGAGATGAAGTCTGTGCCCTGACAGTTACTGCTGCATCTCTTCAGTCAGAGTTAAGCAAAGAGAAAGA
AGCACTTGCTACCATGCAGCAGCTGGAAGCAATGGCATCGATCACCATTTCTTCTCTCAAGGCGGAGATTAAGCTGGCAC
AACAGGAACTGGAGACAGTTCATGCCAAGGAGAAGAAAACCTGCGACAGAATGGGCGAGTTGCCTGGGCTTCTGCAAGTT
GCAGCCCAAGAAGCTGATGAGGCAAAGTCTCTTGCTATGAAGGCACATGAGATGCTAAGAACGAGCAAGGGGGAAATGGA
GCAAGCGAAGGCTGATCTGAGTGCTATGGAATTCAGGCTCCAGGCAGTCCTGAAGGAGACGGTAGCAGCGAAAGAGTCTG
AGAGGCTGTCACTTGATGCTCTCAGAGCTCTGGAGGAGAGCGAGCTTGCAGCAAGCAATACAGAACAAGGCTCTCCTGGA
ATGATCACACTCGACTTAAATGAGCACGCGTCTCTCATCGAGAAGTCCCATCAGGCAGAAGAGCTTTTGCACAAGAAGAT
ATCTTTTGCAGTTGCACAGGTTGAGATGGCCAAGGACTCCGAGTCTCTTGTCTTGGCAAAGCTCAGCGAAGTTTACAAGG
TTCTGGAAGAACGAAAGCAAGCACTGCTTGCTGCCCAAAAGCAGGCCGATGGTGCCACGGAAGGCAAGCTGGCCATGGAG
CAAGAGCTGAGGACATGGAGGGAGGAGCATGGGGAGCGTCGTAAGGCTACCGCTGAGGCTTTGAAATCTGGAACTAAACA
TTCAAATCCGATGGTTATTGTCGTTGAGCGCGATCGGGACACCAAGGGCACATGCAAAGAAGACAGCTGTGCCTTGGTTC
ACCCACTGTCCTCGGATATGTCAGCCAGGAGCAGCCCTGCCGGCCCAGGTTCGCGCGAGAAGGTGAAGAAGGCTAAGAAG
CCGCCGTTCCTCCGCCGTATGATGCTGTTCCTGTCCAGGAGGAGGCTCACAGCAGCGGCGTAACACGGTGTGCTCTCCTT
CTGGCGGATGTGTTGAAACTATTTCCCCGCAAAAAGAAAAAGTAG--------AAGTGTTAGAACTGTCAGATTTGTGTT
CATTCTGCGATAAGCCAAGT---CCTTTTGCTTACTCAACTGCCGTGCTGCAGAACTCTCCGATCACGGGCTGTGAAGTC
TTCATGGAAATTATAT--CTACGGAGA------------AAACGTGAACTTGTAAATTTGCAAAGGTGTAAAGAAAAAAA
GCTTGTAAATTTGTAATGTTTTGAAT---ACTACCGTGTGTTTGTGCCTGTAACTTTGACCGACTCCAGTGCTTGATGCA
CTGGATCTTGAGTTTGATAC--------ACTTTGGACGAATTTCGTGTGCTGGATAAGATGAGTGGGAGCTGCATGCATC
CGGCTCTCGTTCTCGGATCTGATGCTGTTAACATTGTGTGTGCAGAGGGTTTCAGTGGGTCTTGCAAGGCGCTTTCCTCT
GATTTCTTCTGGAGTGTGAACCTTGCTCAAACTGTTCAGAGGAGGGTTACTGTCCTGTGTACATCTGATTGCAAAAGGTT
TCAGACTTTCAGTGGTTTTGCTTGCTGCAAGTATTCTTCTGAATTT----------------------------------
------------------------------------------------TGGTCCCGGCGCCGGCGCTCAACACCTCAATA
TTCAGGCTGAGCGA-GCTCGCTCGCCGGCGGCCGAGACGGATTGTCGGCGGCATGAACCGTGGACGTGTCCGT--GGCGC
GCCAACCAACATGCTCCCCACACACGACGCCGCCTGGCATATCATATTCCTTCCGTGGTAGCAGCTGCCATTGTCGGCGC
TCTCCC---TGCTCGTTGGTGCAGGCCACGTCCCTCAACTTGCCGCAAGAAGAAGCTGTCGCGCACGTCGCCGACTCGCC
GGGCACGTTATTTTTTTTCCTTTTAA----ATTTCCATGCCATCGTGAGCGAGAATTGTGATAAACCATTTCTGTAGGCA
CACATTCCACCGTTTATTTAGTTAATATCCTCCGTAAACTGATGTAAGATCTTTCTTGAACTGCAAAATCG
>chr4A_1
AGTGTACAAAAACTACAGGAAGAAATCAAACCAAATATTGCATTAGGGGAATAAGTCCAAGTCTTCCCCACATATGAATA
TTTTTAAATTGATCCTATTCTCTACTCCCAGGTGGCTCTCCACTGTCCCAATTCTTTCAACCCTTCCTCCAGTGTTGTCT
CCCCAATACCTGCAAAAACTTCCCAAACCTTTTTCCCCATCTCCAGTCTCCTCCCCTCGTTTTGAAGATCCTTCATCCTT
CAATTACGAAATATACAGGCACGAGGTCTCGACTCTTCAGTAAGTTTCAGCTTTTGCTTACTTTCTGATCACGCACATGG
CTTTCAGATACTGTCATCTGTTTGGCTCAGTTGAAATCATGTTTTCCTTTTAT------TTTTT---CATTTCATGAGTT
CTTGAGTTTTA-TTTTTGGATATTTCTAGGATATTTGCTTAGCTTGAAGTTGGATTATTTTGTTTAACCATGTATTTTGC
TTACATATGAAGACCTCAGTTCTTGACATAGATAAAGCAATATTGGTTTTACATGGATCAGAAATTAAACCAAAATC-TA
GAGGTGTCCTGCAACTTGTTTGCATGTCCAGATCGTAC--TTTTGTTATGTCCAAGAACATTTAGCCAAAATAGTTATGC
TAGATGAACCTTTGCCATGACAAATCATCAAGTCAATGTTTTGTGGCTTCTCAGATAGTTATGGTTGAGAAAAAGTACTA
CTTGGTTTGCTCTTATACCATGTATTTATCATCTATAAAATCTTATCAAGTTCAAACTTTTCCTGAATGTTCTTGGATGA
GAACATCACATATGAAGATCCCTCCTTCATTAAACAATCTGTATCTCAGGACTTCCCTTTGCTGAGTTTATTGTAGTTGT
GTA--TGTGTTTGCATGTTTTACTTTATTTGGCAAGTAAACTGGTACTCATACTTAGGTTTTGGCTGTTCCAGTCTAATT
CTCATCTTCAATGTTTTCTTCCACAGTTAATATAAAATTAAACTGTGACTGGAAGAATGGTAGAGGACAATCTTGAGGTG
GGCGACTCTTGTTTGTCTTCACCAAAATCTGTGCAAAATTCTGTAGAGCCTAGCCCAACTGAAGGCACCAATGAAGATGA
AAGCAGTAACCTTGAGAAAACAGCATGTGCCAATTTTGAGACACCAATGCACCAAGAACTTCCTGCAAGCTTGATATTGA
TTGACGAAGAAAGCAATCTGCAAGAGACTTCGGTTGAACAAAAGGCTTCCATTGGTGATTCCATA------TCATCAGAA
GTAGACCACAGTGGGTTGCCATCAATCAAAGAAGATTCTCACAGATTTCCATCTGCCTCTAACGAAGTTGATGAATCAAA
GGATGCCATCAGTGACTTGATGACAACGCATTCTTCAGAAGAAAACACACATGCAACACCACAGACTTCAGTTAGCTCAA
GAGAAGAGGTCCAATGTGCACCTTTGCATAACGTTCAAGATGGTGCTTCCTGTCCCGATTCTGAGAAAACTGCTTGTGAA
GCGCCACCTGCTATCTTACAAAAGGTGAAAGAAGATAAACCACGGTTCATGCATAGATTGCCTGATCGCCAAATGAGCCT
ACGAGACACTAGACAGAAAATGCCTGCGCCCGTGAGGAGATTGAACAGTGGGAATTATTCGAGGACTGATAATTTTTTTG
TCGATACAACGAAGCCCATTGAGTCAGTGAAGGTGGCTGCCTCAAGATTTGGTGGGAGCATCAACTGGAAAACGCGCAAA
ACAGAACCAGTGCAGGTAACTCACAGCATACCTTCTCTTGTTTGTTACATTAATTCTCTCAGCTACAACTTAATAAATTA
TCTTTCATTTGCAT------------------------------------------------------------------
-------------------------------------------------------------------------CAGCTAC
AACTTAATAAATTATCTTACATTAATTCTCTCAGCTACAACTTAATCCTATCTTTTGTAGTTTTATTGAGACTTACTTGA
GCACTCACAGACATTTTT---TTTTACTTTCTCTATGTATGATTAACAATCTTGGTATATCCAGGTGGGTGATCATGTCA
AACTCGAGGTCAGTCTGCTGAAGAACGAAATTTCAGATTGCAAACAGCAAGCAGAAGCTGCAGAGGCTGCAAAGCTGTCT
GTATTCAATGAGATTAAGAGAACAAATAAGCTTATTGAAGACCTGAAACATGAACTGGAGAGGGCAGAACATGAAGAGGC
AGATGCCAAGGAGGATTTGGATTTCTTCCAATTTATTGTACCAGAGATGGAGGAAGGAGGAGCTAGCGGTGATAGTGTTG
CAGGCGAGGAGATTTTGAAAAATATCCAAGAACGGCACAAAGTACTGGTGTCCAAACTGAAGTTGGTCAATGATGAGTTA
AAAGGGGTTCAGGAGAATTATGATTCTTTATTGATTGAACAGGACATTTCCATTGGAAAATCTCAGGCAGCCATCATAGT
ATCCAAAGAGTCTGAGAAGCAAGCAGAGGAGCTCACTGTAGAGCTCAACAAACTGAAGGAAGTGTTGGATTTGGCTCGTG
CCACGCGCCATGATGCTGAAAAACACAAGGCGTGTGCATCCTTAGCTCGAGATGAGGACCGTCTTAAATGGGAGAAGGAT
CTAGGGCAAGCAGAAGAGGAGCTGAGTCAACTCAACAAGAAGCTTTCCTCTGTCGAAGATCTGAAATCAGAGCTCGAAAT
ATCATCCAGCTTGCTGGTGAAGCACAACGAAGAGCTAAATGCATATGTGGAGGAAAAGCTAATTAAAGAAGCACAAGAAC
AAGGAAACAAAACTGATGAGACCATGCAAGAAGAAACCAT---TCTATCAAGAGATGAGCTTGAGGAGCAGAAGAAGAGC
ATTGATAAGGCGAGAGATGAAGTCTGTGCCCTGAAAGTTGCTGCTGCATCACTTCAGTCAGAGTTGAGCAAAGAGAAAGA
AACACTTGCCACCATGCAGCAGCTGGAAGCAATGGCATCGATCACCATTACTTCTCTCAAGGCAGAGATTAAGCTGGCAA
AACAGGAACTGGAAACAGTTCAGTCCAAGGAGAAGAAATCCTGCGATAGAATGAGCGAGTTGCCTGGGCTTCTGCAAGCT
GCAGCCCAGGAAGCTGATGAGGCAAAGTCTCTCGCTGTGAAGGCACAGGAGATGCTAAGAACGAGCAAGGAAGAAATGGA
GCAAGCGAAGGCTGATCTGAGTACTATGGAATTCAGGCTCCAAGCAGTCCTGAAGGAGACGGAAGCAGCGAAAGAGTCTG
AGAGGCTGTCGCTTGATGCTCTCAGAGCTCTGGAGGAGAGCGAGCTTGCAGCAAGCATTGCAGAACAAGGCTCTCCTGGA
ATGATCACACTGGACTTTCATGAACATGCGTCTCTCATCGAGAAGTCCCATCAGGCAGAAGAGCTTGTGCACGAGAAGAT
ATCTTTTGCAGTTGCGCAGGTTGAGATGGCCAAGGACTCCGAGTCTCTCGTCTTAGCAAAGCTCAGCGAAATTTACAAGG
TTCTGGAAGAACGAAAGCAAGCGCTGCTTGCTGCCCAAAAGCAGGCCGACAGTGCCACGGAAGGCAAGCTGGCCATGGAA
CAGGAACTGAGGACATGGAGGGAGGAGCATGGGGAGCGTCGTAAGGCTACCGCTGAGGCTTTGAAATCTGAAACTAAACA
TTCAAACCCGGTGGTGATCGTCGTTGAGCGCGATCGGGACATCAAGGGCACATGCAAAGAAGACAGCTGCGCCTTGGTTC
ATCCGCTGTCCTCGGATATGTCAGCCAGGAGCAGCCCTGCCGGCCCAGGTTTGCGCGAGAAGGCGAAGAAGGCAAAGAAG
CCGCCGTTCCTCCGGCGCATGATGATGTTCCTGGCCAGGAGGAGGCTCACAGCAGCGGCGTAACACGGTGTGCTCTCTTT
CTGGCAGACGTGTTAGAACTATTTCCCCACAACAACAACAACAAAAAAGAAGCAAGTGTTAGAAGTG-------------
-----------------------CCTTCTGCTTGCTCAACTGCGATGCTGCAGAACTCTTGGATCACGGGCTGTGAAGTC
TTCATGGAATTTTTATATCTACGGAGA------------AGACACGAACTTGTAAACTTGCGAAGGTGTACAAG--AAAA
GCTTGTAAATTTGTAATGTTTTGAATACTACTACCGTGTGTTTGTGCCTGTAACTTTGACCGACTCCATTGCTTGATGAA
CTGGATCTTGAGTTCGATAAGTACTAGTACTTTGGACGAATTTCGTGTGCTGGATAAGATGGGTGGGAGCTGCATGCATC
CGGCTCTTGTTCTCGGATCTGATGCTGTTAACATTGTGGATGCTGGGAGTTTCAGT------------------------
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>chr4D_1
AGTGTACAAAAACTACAGGACGAAATCAAACCAAATATTGCATTAGGGGAATAAGTCCAAGTCTTCCCCACATATGAATA
TTTTTAAATTGATCCTATTCTCTACTCCCAGGTGGCTCTCCACTGTCCCAATTCTTTCAACCCTTCCTCCAGTGTTGTCT
CCCCAATACCTGCAAAAACTGCCCAAACC-TTTTCCCCATCTCCAGTCTCCTCCCCTCGTTTTGAAGATCCTTCATCCTT
CAATTACAAAATATACAGGCACGAGGTCTCAGCTCTTCAGTAAGTTTCAGCTTTTGCTTACTTTCTGATCACGCACATGG
CTTTCAGATACTGTCGTATTTGTGGCTCAGTTGTAATCATGTTTTCCTTTATTTATTTATTTTT---CGTTTCATGAGTT
CTTGAGTTTTACTTTTGGGATCTTTCTAGGATGTTTGCTTTGGTTGAAGTTGGATTATTTTGTTTAACCATGTAATTTGC
TTACATATGAAGACCTCAGTTCTTGACATAGATAAAGCAATATTGGTTTCACATGGATCAGAAATTAAACCAAAAATTTA
GAGGTGTCCTGCAACTTGTTTGCATGTCCAGATCGTAC--TTTTGTTATGTCCAAGAACATTTAGCCAAAATAGTTGTGC
TAGATGAGCCTTTGCCGTGACAAATCATCAAGTCAATATTTTGTGGCTTCTCTGATAGTAATGGTTGAATAAAAGTACTA
CTTGGTTTGCTCTTATACCATGGATTTATCATCTATAAAATCTTATCAAGTTCAAACCTTTCCTGAATGTTCTTGGATGA
GAACATCATATATGAAGACCCCTCCTTCATTGAAAAATCTGTATCTCAGGACTTCCCTTTGCTGAGTTTATTGTAGTTGT
GT----GTGTTTGCATGTTTTACTTTATTTGGTAAGTAAACTGGTACTCATACTTAGGTTTTGGCTGTTCCGGTCTAATT
CTCATCTTCAATGTTTTCTTCCACAGTTAATATATAATTAAACTGTGACGGGAAGAATGGTAGAGGAGAATCTTGAAGTG
GGTGACTCGTCTTTGTCTTCACCAAAATCTGTGCAAAATTCATTAGAGCCTAAGCCAACTGAAGGCACTAATGAAGATGA
TAACAGTAACCTTGAGAAAATAGCATGTGCCAATTTGGAGACACCGATGCACCAAGAACTTCCTGCAAGCTTGATATTGA
GTGATGAAGAAAGCAATCTGCAGGAGATTTCGGTTGAACAAAAGGCTCCCATTGGTGATTCCATAATTGGTTCATCAGAA
GTAGACCACAGTGGGTTGCCATCAATCAAAGAAGATTCTCACAGTTTTCCATCTGCCTCTAACGAAGTTGATGAATCAAA
GGATGCTATCAGTGACTTGATGACAATGCATTCTTCAGAAGAAAACACAGATGCAATGGCACAGACTTCAGTTAGCTCAA
GAGAAGAGGTCCAATGTGCACCTTTGCATAACGTTCAAGATGGTGCTTCCTGTTCTGATTCTGAGAAGACTGTTTGTGAG
GCGCCACCTGCTATCTTACAAAAGGTGAAAGAAGATAAACCACGGTTCATGCATAGATTGCCTGATCGCCAGATGAGCCT
ACGAGACACTAGACAGAAAATGCCTGCACCTGTGAGGAGATTGAACAGTGGGAATTATTCGAGGACCAGTAACTTTTTTG
TCGATACAACGAAGCCCATTGAGTCAGTGAAGGTGGCTGCCTCAAGATTTGGTGGTAGCGTCAACTGGAAAACGCGCAAA
ACAGAACCAGTGCAGGTAACTCACAACATACCTTCTCTTGTTTGTTACATTAATTCTCTCAGCTACAACTTAATAAATTA
TCTTTCATTTGCAT------------------------------------------------------------------
-------------------------------------------------------------------------CAGCTAC
AACTTAACAAATCATCTTACATTAATTCTCTCAGCTACAACTTAATTCCATCTTTTGTAGTTTTATTGAGACTTACTTGA
GCACTTACAGACACAATCTTTCATT----------TGTATGATTAACAATCTTGGTATATCCAGGTGGGTGACCATGTCA
AACTCAAGGTCAGTCTGCTGGAGAACGAAATTTCAGATTGCAAACAGCAAGCAGAAGCTGCAGAGGCTGCAAAGCTGTCT
GTATTCAATGAGATTGAGAGAACAAATAAGCTTATTGAAGACCTGAAACATGATCTGGAGAGGGCAGAACATGAAGAGGC
ACATGCCAAGGAGGATTTGGATTTCTTCCAATTTATTGTACCAGAGATGGAGGAAGGAGGAGCTAGCGATGATAGTGTTG
CAGGCGAGGAGATTTTGAAAAATATCCAAGAACGGCACAAAGTACTGGTGTCCAAACTGAAATTGGTCAATGATGAGTTA
AAAGGGGTTCAGGAGGATTATGATTCTTTATTGATTGAACAGGATATTTCCATTGAAAAATCTCAGGTAGCCATCATAGT
ATCCAAAGAGTCCGAGAAGCAAGCAGAGGAGCTCACTGTAGAGCTCAACAAACTGAAGGAAGTGTTGGATTTGGCTCGTG
CCACGTGCCATGATGCTGAAAAACACAAGGCGTGTGCATCCTTAGCTCGAGATGAGGACCGTCTTAAATGGAAGAAGAAT
CTAGGGCAAGCAGAGGAGAAGCTGAGTCAACTCAACAAGAAGCTTTCCTCTGTTGAAGATCTGAAATCAGAGCTCGAAAT
ATCATCCAGCTTGCTGGTGAAGCGCAACGAAGAGCTAAATGCATATGTGGAGGCAAAACTAATTAAAGAAGCACAAGAAC
AAGGCAACAGAACTGAGGAGACCATGCAAGAAGAAACCAT---TGTATCAAGAAATGAGCTCGAAGAGCACATGAAGGGT
ATTGATAAGGTGAGAGATGAAGTATGTGCCCTGAAAGTTGCTGCTGCATCACTTCAGTCAGAGTTAAGCATAGAGAAAGA
AGCACTTGCCACCATGCAGCAGCTGGAAGCAATGGCATCGACCACCATTAATTCTCTCAAGGCGGAGATTAAGCTGGCAC
AACAGGAACTGGAAACAGTTCAGGCCAAGGAGAAGAAAACCCGCAATAGAATGAGCGAGTTGCCTGGGCTTCTGCAAGCT
GCAGCCCAGGAAGCTGATGAGGCAAAGTCTCTTGCTATGAAGGCACAGGAGGTGCTAAGAACGAGCAAGGGGGAAATGGA
GCAAGCGAAGGCTGATCTGAGTGCTATGGAATTCAGGCTCCAGGCAGTCCTGAAGGAGACGGAAGCAGCTAAAGAGTCTG
AGAGGCTGTCGCTTGATGCTCTCAGAGCGCTGGAGGAGAGCGAGCTTGTAGCAAGCATTGCAGAACAAGGCTCTCCTAGA
ATGATCACGCTTGACTTTGATGAACACGCGTCTCTCATCGAGAAGTCCCATCAGGCAGAAGAACTTGTCCATGAGAAGAT
ATCTGTTGCAATTGCGCAGGTTGAGATGGCCAAGGAGTCCGAGTCTCTCGTCTTGGCAAAGCTCAGCGAAGTTTACAAGG
TTCTGGAAGAACGAAAGCAAGCACTGCTTGCTGCCAAAAAGCAGGCCGATAGTGCCACCGAAGGCAAGCTGGCCATGGAA
CAGGAACTGAGGACATGGAGGGAGGAGCATGGGGAGCGTCGTAAGGCTACCGCTGAGGCTTTGAAATCTGAAACTAAACA
TTCAAACCCGGTGGTGATCGTCGTTGAGCGCGATCGGGACACCGGGGGCACATGCAAAGAAGACAGCTGTGCCTTGGTTC
ACCCACTGTCCTCAGATATGTCAGCCAGGAACAGCCCTGCCGGCCCAGGTTTGCGCGAGAAGGCGAAGAAGGCAAAGAAG
CCGCGGTTCCTCCACCGCATGATGATGTTCCTGGCCAGGAGGAGGCTCACAGCAGCGGCGTAACACGGTGTGCTCTCCTT
CTGGCGGATGTGTCAGAAGTATTTCCCCGCAAAAAGAGAAAGAAG--------AAGTGTTAGAACTGTCAGATTTGTGTT
CATTCTGCGATAAGCCAAGTGATCCTTTTGTTTACCCAACTGCCGTGCCGCAGAACTCTCCGATCACGGGCTGTGAGGTC
TTGGTGGAATTTATATCTATATATATGGAGAAAGTTCTGAAACGCGAACTTGTAAATTTGTGGAAG-------AAAAGAA
GCTTGTAAATTTGTAATGTTTTGAATACTAGCGTGTGT--TTTGTGCCTGTAACTTCGACTGGCTCTAATGCTTGATGAA
CTGGATCTTGAGTTGGATG----------CTTTGGGCGAATTTCGTGCGCTGGATAAGATGAGAGGGAACTGCGTGCCTC
CGGCTCTTGTTCTCGGATCTGGTACTGTAA----------------------CAGTGGGTTTTGCAAGGCGCTTTC----
------TTCTAGAGTGTGAACATTGCTCAAATTGCGTGGAGCAGTTATTATCCTGCAACTACATCTGAATGCAAAC----
------------TGGTCCTGCATGCTGCAA-TATTCTTCTGAATTTTAGGGGGACTTAGACTGGAGATTCAGCTTATTCT
TACACATAACACATTCGGGGGATACCTGGAGAAGGCACAGGGAAATCATGGTGCCGACCACGGCGCTCAACGCCCTCAAT
GTTCATGTTCAGCTCGCGCGCTCGCCGACGGCCGGGGCGGATTGTCGGCGGCGTGGCCGTGGCCGTGGGACGCACGGCGC
GACAATCAACATGCTCTCCACACACGACGCCTGGCATATCATCATATTCCTTCCGCGGTGGCAGCTGCCATTGTCGGCGC
GACATTCCGTGCTCGTTGGTGCAGGCCACGTCCCTCAACTTGCCGCAAGACGAAGCTGTCGCGCACG--------TCGCC
GGGCACGTTATTTTTTTTCCTTTTAATTAAATTTCCATGCCCTCGTGAGTGAGAATTATGATAAACCATTTCTTTATGCA
CACATTTCACCGTTTATTTAGTTAATACCTGTTGTAAACT-------------------------------
>SNPs
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S---------S----------S---------------------------------------------------------
--------------------------------------------------S-S------S----SSS-------------
------------------------------------------------------------------------S-------
-----------------------------------------------------------S--------------------
--------------------------------------SS----S-----------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
-----------------------------------------S--------------------------------------
--SSS-------SS---S-----------------S--------------------------SS----------S-----
-------------------------------------------S-----S------------------------------
-S-------------------------------------------------S----------------------------
S----S--------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--S-------------------------------------------------S------------------------S--
-------------------------S-S---S------------------------------------------------
----S----------------------------SS---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S--------------------------------------------------S------
-----------------------------------------------------S--------------------------
--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
-----------------------------------S--------------------------------------S-----
------------------S-------------------------------S-----------------------------
-----------S-------------S-------------------------------------S----------------
---------------------------------------S-------------S--------------------------
---------------------------S---------------------------------------S------------
----------------------------S-----------------------------------------S---------
-----------------------------------------------------------S--------------------
------------------------------S------------S-S----------------------------------
---------S----------S----------------S--------------------------------------S---
--------------------------------------------------------------------S-----S----S
------------------------------------------------S-------------------------------
----------------------------------------SSS---------------S--S------------------
----------------------------------S----S----------S-----------------------------
---------S---------------------------------------S------------------------------
-------------S--------S-----------------------S------S------------------------S-
--------S--------------------------------------S--------------------------------
--------------------------------------------------------------S-----------------
----------S----------------------------------------------S-S--------------------
-----------S-----SS----S------------------------------------------S-----S-------
---------------S--------------------------------S-------------------------------
--------------------------------------------------S----------------------------S
--S--S----------------------------------------------------------------S---------
------S---S----S--S-------------------------------------------------------------
---------------------------------------------------S-----------S---------S------
-----------------S------S--------S----------------------------------------------
--------------SS--------------------------S-------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------S----------------S--------S-S-------
--------------------------------------------------------------------S---------S-
--------------S----S------------------------------------------------------------
-------S------------------------------SS---S-S-S------------S---------------SSSS
SSSSSS----S----------S---------S--SSSS---S--SSS-SS-SSSSSSSS---------S------SSSSS
SSSSSSSSSSSS----SS---S--------S-------------------------------------------------
----------------------------------------------------S---S-SS-----------S--SSS-SS
S-SSSSS-SSSSSS---S---------S------S-S---------------S--SS-SSS-SSSSS-SS--S-------
-S---S----------S--------------SSSSSSSSS---------------S---S--------------------
SSSSSS--------------------------------------------S----------------SSSSSSSS-----
-----------------------------------------S-------S-------S---------------S--S---
------S--------------------S-SSSS-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_599
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GTTTGCATGTCCAGATCGTACT-----------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>reverse_1754
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------ACGCAAA
ACAGAACCAGTGC-------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>forward_1251
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--------------------------------------------------------------------------------
-------------------------------GGTTGAACAAAAGGCTCCCG-----------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>reverse_2294
--------------------------------------------------------------------------------
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-----------------------------------------------------CCTGGAGAGGGCAGAACATG-------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>forward_2186
--------------------------------------------------------------------------------
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-----GAGGTCGGTCTGCTGAAGAAT------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>reverse_3458
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-----------------AAATGAGCACGCGTCTCTCA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_2388
--------------------------------------------------------------------------------
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------------------------------------------------GGAGGAAGGAGGAGCTAGCA------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>reverse_3536
--------------------------------------------------------------------------------
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---------------ACAGGTTGAGATGGCCAAGG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>forward_2995
--------------------------------------------------------------------------------
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--------------AGATGAAGTCTGTGCCCTGAC---------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------------
>reverse_4569
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------TCAGTGGTTTTGCTTGCTGC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
