>input_sequence_25524
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--------------------------------ATGGCCGGCTTCCTCCAGCGCCACGTCCTCCCGCCCTTCCGCCGCCCG
CCGCTCCCCTTCTTCCGCCACGGCGCCGGCACCGCGGCCTCCTCCAACCAGCCCCAGGGCCGCCGGCCATGGACGCCCAG
CCGCATCCTCGACCCCGGGGACGACGTCGTCCTTAACTGGAACCGCCTCTTCCTCGTCACCTGCATGGTCGGCCTCTTCG
TCGACCCCATGTACTTCTACCTCCTCTACGCCAAGACGCAGGCGTGCGTCAAGATGAACATGGGCATCGGCGTCGCCGTC
ACCGCCGTGCGCACCGTCGCCGACCTCTTCTACCTCGCGCACATGATCCTCAAGTTCCGCACCGCTTTCGTCGCGCCCAG
CTCGCGCGTCTTCGGGCGCGGCGAGCTCGTCAGGGACCCCGACCAGATCGCCATCCGATACCTCAAGAACGACTTCATCA
TCGATCTCGCCGCCATGCTCCCGATTCCCCAGGCATGCCTCCATCCCTCCGTC---CTTCTCACAATCTCTCCATCGTCA
ACAA---------------CGACGCA---TTTCAAATCTGGCAATCTTTGCATATTTTTATCAATATTTGTGCTCTTGTG
TTAAATTTCAGAAATGTCATTACAGTGTGATGAGTTTTGACGTGATACAGTT----AATCCTGTGTTCCTTGTGAAGGAC
ATGATTAATGTGCATGCAACGACAGTGCATTCGGACCTTGATACAGCTTCCCTGATCAAATGTTGTGTTAGTTATATATA
TA-----------------GCTCAAATGTATAAGCAGGAATGTTTCAGAGGGTCAAACACA-------------------
-----------------------AGTCACATACTGAATACTACTAC--GTACGTGATAATTAACCTGAGCAGGCCTATTG
TTGCAGATCATTATCTGGTTTGTCATACCAGCTGTGAGCACCACCTCAGCAAACCACACCAACAACACGCTCTCGATGAT
CGTGCTGATCCAGTACATACCCAGAGTGTTCCTCATCATATCCCTCAACTCCAAGATCGTTAAGTCCAGTGGAGTGGTCA
CAAGAACTGCCTGGGCAGGGGCTGCCTACAACCTGCTTCTCTACACGCTGGCCAGTCATGTATGTATGCATGCA----CG
CCGTCGTCTTTTGTGTTCCTCGTTCCATTTCGAACAGA-----GCAATAGATTCACATGGTGGGTATATGT---------
-------TATGTAGGTTCTGGGAGCCCTGTGGTACCTGCTGTCCATAGAGAGGCAGTACACCTGCTGGGTGGACCAATGC
ACAAGCGATAATGGCACTGACCCCAGGGTGCCCATATGTGACATGAGCTATCTGGACTGCAAAACGCTCGAGGACCCTGT
TCGGATGAAGTGGCACGCGGCTAGCAACATCACTAAGCAGTGCGGGCTTCCCGGGGCGAGATTTGAGTACGGATTGTTCG
AGGATGCTCTCAAGCTCGATATCGTCGATGCGTCCTTCTTCGAGAAGTATCTCTACTGCCTCTGGTGGGGTTTCCGGAAC
TTGAGGTATGCATACA--------TGTGTATAAAGATGCAGTTCTTTTGATGTCTGAACTGAGT----------------
-------ATG-----------------------ATGATGCAAGGATAACTGAATTTGTGTTTGTTTTCTGCAAGTTCTTA
TGGACAGAATTTGCAGAACAGCACCTACGCAGGGGAGACTATATTCTGCATCCTCATCTGCATCATGGGCCTTGTTTTCT
TCTCACATCTCATTGGAAACATGCAGGTATTTATTTATTTATTATCCTGAAAATGGATGCTCATTTTCCATGTTTGAAAA
TTTACCCTGCAGCTGTGGATATTGCCCAAATCGACATACATACATTGTT-------------------------------
---------------------------------------CGTTGTCCCATCTTGGCTCTTTGTTTTTTGCTTCGCAGACG
TACTTGCAGTCGATGACGGTGAGGCTGGAGGAGTGGCGGGTGAAGCGGCGCGACATCGAGGAGTGGATGCGTCACCGGCA
GCTTCCCCTGGAGCTCCAGGAGCGCGTCCGGAGGTTCTTCCAGTACAAGTGGCTGGCCACCAGAGGCGTCGACGAGGAAT
CCATCCTCCAGTCTCTGCCCCTCGACCTCCGCCGCGAGATCCAGCGCCACCTCTGCCTCGCCCTCGTCCGGCGGGTACGT
TGCCACGCCATATGCCATTTGCTCTCCGCCGCCGGCACGGTGACTGTGACTCCGACGCTGAACGTCGGCATTAACTGTGG
TCTTGCTTGCATTGCAGGTGCCCTTCTTCTCGCAGATGGACGAGCAGCTGCTGGACGCCATCTGCGAGCGGCTGGTGTCG
TCGCTGAGCACCAAGGACGCGTACATCGTGCGGGAGGGCGACCCCGTGAGCGAGATGCTCTTCATCATCCGCGGCGAGCT
GGAGAGCTCGACGACGGACGGCGGCCGGACCAACTTCTTCAGCTCCATCACGCTCCGGCCGGGGGACTTCTGCGGCGAGG
AGCTCCTGACGTGGGCGCTGATGCCCAACCCGAGCCTCAACTTCCCGCAGTCGACGCGCACGGTGCGGTCGGTGACGGAG
GTGGAGGCGTTCGCGCTCCGCGCCGAGGACCTCAAGTACGTGGCCAACCAGTTCAAGCGCCTCCACAGCAAGCGGCTGCA
GCACGCGTTCCGGTACTACTCCCACCAGTGGCGGAGCTGGGGCGCCTGCTTCGTGCAGGGCGCCTGGAGGCGGTACAAGA
AGAGGAAGCTCGCCAGGGAGCTCATGAAGCAGGAGGGGCTCCTCTACGAC---CAGGGCGACGGCGGCGACGACGACGGG
CAGGGCGGGGCCGGCGCCATCGCCGGCGCCGACGCCAGCACGCCGCTGCTCGGCGAGTACAAGGGCGGCGCTGGTGCGGC
G---TCGTCGTCCGCGGAGGGCGGCGACGGCGGCGGCACGCACCTGGGCGCCACGTTCCTGGCATCCAAGTTCGCCAAGA
ACACCAAGAAGGGCGCGCACCAGAAGAGCATGTCGCAGCGGATCGACGACGTGTCCACCATGAAGTTCCCCAAGCTGGCC
AAGCCGGACGAGCCGGACTTCTCTTTGCACTCCGAGGACACGCTGTAA--------------------------------
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>chr4D_1_TraesCS4D01G091700
ATATTCACAAATTTGAAATAAAATTTGCAAATTTAATAATGTTCACAAACACCAAAACTGTTCGTGAATTTTTAAAATAT
TCATGAATTT-------------AGAAAATGATCAAGGATTTTAAAAATGTTAACACATTTTAATGTGAAAAATAAGTTT
AAGGGTAGAAAAGAAAAGAAAACCAA-AAATTAATAAAAGGAAAAAA-CGAA-CAGAAACCATCCTCAACCAACGGCACA
CACCCTTACAGCCGGGTCCGAGCGACCCCACAACCATTGATGCACAAGGAGGTCC-------------------------
--------AAATCTAGAGAGCTTAGTATGTTTTTATTATTAAT--TGTGGCAGTGCAAACAAGTGACGTTGG-CAAGCAC
TGCTTCTAGTTCCGCGGAGCTGACAACGTGGCTATGTGTTTTGGTTGGTTCTCTGGTTCAAGTTCTGATCGGTAAAAGTT
GGCCAGCCTTGGCTTCGTCGGGAGGGTGTGAGATTTGTGTTCCCGACTCTGCGTGGCTG---------------------
-------------GATCTGGGGTGTTCTACAAGCCCTCTTCGATGTTTTATTCTCCGGAGCGACGATCTTTT--------
---------------------------------------GACCGCTGATTCTATGAACTTTTGCATTTCAACAAGTTTGT
TTCACGAAGACGGAGACCCTGATGCAACAATGAGCATGTAGGGTCCTCTGGATCAAGGAATTGAGGTGCCAAATTCACAT
ATAATGGATTCGGAAGAGTTA-TTTAGGCTCGCACAACCTACAAATAATGTCTGTTTTTTTTTTGGTTAAAAAACATTTG
AAGTGTCCGGATTGGAGCTGTCTCGACATTAGAAATTTGCTTGGAGAATGGAGAGAGCAGAGCACCCACCC---------
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---------ACCCCAATGCTGAATGCCGATTTGTGGCTCGGTCGGTCGCGCGGCGAGGCAAAGCACCCGCAACGCGCGGC
CGCCGCACCACCTCGTGGCCCCGATCGAAGCCGCAACACCCACCCCACCCGCGCACGCGCATGCAATGCATGACGATCGA
CGCCCCGACGCCCACCGCCACGAGCACCGCCCATGGCCGGCTTCCTCCAGCGCCACGTCCTCCCGCCCTTCCGCCGCCCG
CCGCTCCCCTTCTTCCGCCACGGCGCCGGCACCGCGGCCTCCTCCAACCAGCCCCAGGGCCGCCGGCCATGGACGCCCAG
CCGCATCCTCGACCCCGGGGACGACGTCGTCCTTAACTGGAACCGCCTCTTCCTCGTCACCTGCATGGTCGGCCTCTTCG
TCGACCCCATGTACTTCTACCTCCTCTACGCCAAGACGCAGGCGTGCGTCAAGATGAACATGGGCATCGGCGTCGCCGTC
ACCGCCGTGCGCACCGTCGCCGACCTCTTCTACCTCGCGCACATGATCCTCAAGTTCCGCACCGCTTTCGTCGCGCCCAG
CTCGCGCGTCTTCGGGCGCGGCGAGCTCGTCAGGGACCCCGACCAGATCGCCATCCGATACCTCAAGAACGACTTCATCA
TCGATCTCGCCGCCATGCTCCCGATTCCCCAGGCATGCCTCCATCCCTCCGTC---CTTCTCACAATCTCTCCATCGTCA
ACAA---------------CGACGCA---TTTCAAATCTGGCAATCTTTGCATATTTTTATCAATATTTGTGCTCTTGTG
TTAAATTTCAGAAATGTCATTACAGTGTGATGAGTTTTGACGTGATACAGTT----AATCCTGTGTTCCTTGTGAAGGAC
ATGATTAATGTGCATGCAACGACAGTGCATTCGGACCTTGATACAGCTTCCCTGATCAAATGTTGTGTTAGTTATATATA
TA-----------------GCTCAAATGTATAAGCAGGAATGTTTCAGAGGGTCAAACACA-------------------
-----------------------AGTCACATACTGAATACTACTAC--GTACGTGATAATTAACCTGAGCAGGCCTATTG
TTGCAGATCATTATCTGGTTTGTCATACCAGCTGTGAGCACCACCTCAGCAAACCACACCAACAACACGCTCTCGATGAT
CGTGCTGATCCAGTACATACCCAGAGTGTTCCTCATCATATCCCTCAACTCCAAGATCGTTAAGTCCAGTGGAGTGGTCA
CAAGAACTGCCTGGGCAGGGGCTGCCTACAACCTGCTTCTCTACACGCTGGCCAGTCATGTATGTATGCATGCA----CG
CCGTCGTCTTTTGTGTTCCTCGTTCCATTTCGAACAGA-----GCAATAGATTCACATGGTGGGTATATGT---------
-------TATGTAGGTTCTGGGAGCCCTGTGGTACCTGCTGTCCATAGAGAGGCAGTACACCTGCTGGGTGGACCAATGC
ACAAGCGATAATGGCACTGACCCCAGGGTGCCCATATGTGACATGAGCTATCTGGACTGCAAAACGCTCGAGGACCCTGT
TCGGATGAAGTGGCACGCGGCTAGCAACATCACTAAGCAGTGCGGGCTTCCCGGGGCGAGATTTGAGTACGGATTGTTCG
AGGATGCTCTCAAGCTCGATATCGTCGATGCGTCCTTCTTCGAGAAGTATCTCTACTGCCTCTGGTGGGGTTTCCGGAAC
TTGAGGTATGCATACA--------TGTGTATAAAGATGCAGTTCTTTTGATGTCTGAACTGAGT----------------
-------ATG-----------------------ATGATGCAAGGATAACTGAATTTGTGTTTGTTTTCTGCAAGTTCTTA
TGGACAGAATTTGCAGAACAGCACCTACGCAGGGGAGACTATATTCTGCATCCTCATCTGCATCATGGGCCTTGTTTTCT
TCTCACATCTCATTGGAAACATGCAGGTATTTATTTATTTATTATCCTGAAAATGGATGCTCATTTTCCATGTTTGAAAA
TTTACCCTGCAGCTGTGGATATTGCCCAAATCGACATACATACATTGTT-------------------------------
---------------------------------------CGTTGTCCCATCTTGGCTCTTTGTTTTTTGCTTCGCAGACG
TACTTGCAGTCGATGACGGTGAGGCTGGAGGAGTGGCGGGTGAAGCGGCGCGACATCGAGGAGTGGATGCGTCACCGGCA
GCTTCCCCTGGAGCTCCAGGAGCGCGTCCGGAGGTTCTTCCAGTACAAGTGGCTGGCCACCAGAGGCGTCGACGAGGAAT
CCATCCTCCAGTCTCTGCCCCTCGACCTCCGCCGCGAGATCCAGCGCCACCTCTGCCTCGCCCTCGTCCGGCGGGTACGT
TGCCACGCCATATGCCATTTGCTCTCCGCCGCCGGCACGGTGACTGTGACTCCGACGCTGAACGTCGGCATTAACTGTGG
TCTTGCTTGCATTGCAGGTGCCCTTCTTCTCGCAGATGGACGAGCAGCTGCTGGACGCCATCTGCGAGCGGCTGGTGTCG
TCGCTGAGCACCAAGGACGCGTACATCGTGCGGGAGGGCGACCCCGTGAGCGAGATGCTCTTCATCATCCGCGGCGAGCT
GGAGAGCTCGACGACGGACGGCGGCCGGACCAACTTCTTCAGCTCCATCACGCTCCGGCCGGGGGACTTCTGCGGCGAGG
AGCTCCTGACGTGGGCGCTGATGCCCAACCCGAGCCTCAACTTCCCGCAGTCGACGCGCACGGTGCGGTCGGTGACGGAG
GTGGAGGCGTTCGCGCTCCGCGCCGAGGACCTCAAGTACGTGGCCAACCAGTTCAAGCGCCTCCACAGCAAGCGGCTGCA
GCACGCGTTCCGGTACTACTCCCACCAGTGGCGGAGCTGGGGCGCCTGCTTCGTGCAGGGCGCCTGGAGGCGGTACAAGA
AGAGGAAGCTCGCCAGGGAGCTCATGAAGCAGGAGGGGCTCCTCTACGAC---CAGGGCGACGGCGGCGACGACGACGGG
CAGGGCGGGGCCGGCGCCATCGCCGGCGCCGACGCCAGCACGCCGCTGCTCGGCGAGTACAAGGGCGGCGCTGGTGCGGC
G---TCGTCGTCCGCGGAGGGCGGCGACGGCGGCGGCACGCACCTGGGCGCCACGTTCCTGGCATCCAAGTTCGCCAAGA
ACACCAAGAAGGGCGCGCACCAGAAGAGCATGTCGCAGCGGATCGACGACGTGTCCACCATGAAGTTCCCCAAGCTGGCC
AAGCCGGACGAGCCGGACTTCTCTTTGCACTCCGAGGACACGCTGTAAAAAAG------GAACACGATACGTACACTGCG
TGCAGCCGAAACCACTACCGTTTGTTCTCTTGTTCGGTTGTTCCTCCTCCTCTT---TTGTTGGGTCACTAAA-CGCTGG
TCAGGATCATGAAAGGGCTGCTGCGTAGATAGATGGAGCTGGAGTCGCATGTTGTACTGTACACTAGTGCTGATTTAGTA
AAGTTGATCTTACTTTTTTTTTGAGGGGTGTAAAGTTGATCTTACTTGAGAAACACTTACCGATGTAAGTGTACTCCAGC
GATCCTCCCTGAATGTGAAAAGCTGACCAGACATGTCGTGAGAGGTAAGAGCATCTACGCAATCCCTGGCCCTCG-----
-----------------------GTGACCGAGCACATATCAAAAGTCCGTCTCCAGTCTCCACAACCGGCTCCCTCAAAC
CAAATCCTCAAATCTATACTAATTTCACGTACGTACTCCCTCCGTTTCTTTTTACTCCACATATAAGAGTTCGTCAAAGT
CAAACTACACAAAGTTTAATCAAATTTATATAAAAAAATATGAACATCTACATTATTAAAACTATATAGTATGAAAATAC
GTATTATGGTGCATATGATAATATTGATTTCATATTGTGAATGTCTATATTTTTTAATATAAAGTCAGTCAAACTCTACA
AAGCTTGACTTTGACCAAACCTTATATGCGGACTAAAAAGAAACGGAGGGAGTACATAGTTGAACATACATGTCATGGGA
CTACCAAAATTTTGACATGTTCGACTAGCTACGCCAATGAAAAAAGTTCATCCACGACTACCTTTTA-CCCTTGCCGCCT
TGGTTGCGGAAGTAGAGGTCTGAGATGCAAAACGGATCAAGGCAATCTGCCCACTGTCGGAGTTGTCCAATCCCTCGCGG
TCCTCCACCTTCTCCTCTTTGGGTGGCTGTCCCGCCATGGCACAGACAGCCCGACTTGGCTCCCTTGCCAGCCATGCGCA
TCACCCTCCTTTGCCGCTTCCCGCTGATGCGGGCACGAAGGTGTTTC
>chr4B_1
ATATTCACAAATTTCAACTAAAATTTGTAAATTTAATAATGTTCACAAACACCAAAATTGTTCGTGAATTTTTAAAATAT
TGATGAATTT-------------AGAAAATGATCAAGGATTTAAAAAATGTTCACAAA-TTTAATGTGAAAAATAAATTT
AAGGGTAGAAAAGAAAAGAAAACCAATAATATAATAAAAGGAAAAAAACGAA-CAGAAAC---CCTCAACCAACGGCACA
CACCCTTATAGTCGGGTCCGAGCGACCCCACAACCCTTGATGCACAAGGAGGTTCCAAATC-------------------
-------------TAGAGAGCTTAGTATATTTGCATTATTAAT--TGTGGCAGCGCAAACAAGTGACGTTGG-CAAGCAC
TGCTTCTAGTTCTGCGGAGCTGACAATGTGGCTATGCGTTTTGGTTGGTTCCCTGGCTCCAGTTCCGATCGATAAAAGTT
GGTCAGCCTTGGCTTCGTTGGGAGCGTGTGAGATTTGTATTCCCGACTATGCCTAATTG---------------------
-------------GATCTGGGGTGTTCTACAGGCCCTCTTTGATGTTTCATTCTCCGGAGCGATGATTCGCTATGCAAAT
TGTGGTCACCCGTGTCTTGGTCTACATCGACGGTTTTTCGACCGCTGCTTCTACAAGCTTTTGCATTTCAACAAGTTTGC
TCCATGAAGACGGAGACCCTGATGCGACAATGAGCATGTAGGGTCCTCTGGATCAACGAATTGAGGTGCTAAATTCACAT
ATAATGGACTCCGAAGAGTTAATTTAGGCTCGCACAACCTACAAATAATGTCTGTTTCTTTT--TGTTAAAAAACATTTG
AAGTGTCCGGATTGGAGCTGTCTCCACATTAGAAATTTGTTTAGAGAGAGCAGAG-----------CACCCAAATGCCCA
GCCAAAAATGCTAGACTTACTAAAGAAACTACGTATGCTTACGTAACTTGACTAACAACTAATCCCTCCGCCCCCCTGAT
TTCAACTGGGTGGGGTCCCTCCCCTAATTCCCTCCAACAGAAAAAAAGACACCTAAGCTGTTACGTTAGTTTACGTACAA
CAGCTACGTAGGTGTAGCATTGCTGCCCAAAGGAAAAAGTCCAAAATAAACCTTGAACATGTAGATGAAAGCTAAATCAA
ACCCTGAACTTGTAATCCCGGAAATCAGCACACCGAACTCATTGATCCCGGTCTATTTTAAACCTTGAAGGCGTTTCCAA
ACAGGGATTGTGCACGTGGCAGACCAACTCCCGGGATTGTTGGCTACACACGCGATTGGGCCGGCCCATCAGGCGTGAAG
GGAGATTTTTTTTCTTTTTTTCATTTTACTTTTTCGTAAGTGCGACATAAAAATAACCAAAAATAAGACAGCAGGCAGAG
TCGAACTTGTCCCTTGGCCTATCGATATCCACTTGCTAGCCACGAGAGTAGATCACTATTAGTGCAACAAGTTGAAGCGC
GAACATAATTAATCAGACACCAGCGTCGAGATTTGTAAACATTTTTTGGGAGCAAACAAATTTTGAAACGTATTTTTTTT
TTGAAATCCCCAAGATATTCTAAGGTGCGAACACTTTTTTAATTTTGAATACTTTTGAAAAAAGGAACAACTTTTTTGAA
AACACAATCAGTTTTTACAAAGCGAATACTCTTCGAAACATAAAAATAACAATAAAAAGGGAACAATTCTTGAATCCAGA
AAAAAAATATGCACAAACTTTCAAAAAAATGTTTACTATAATTTTTTCATAAATTCAAAAATGTTAAAGCATTTCATAAG
TTGCTGAATAGTTAAAAAATGTTCATGTTTTCTAATTTTGTCACAAACTAAAAACTGTTTGGTGTTTAATAAAAATTGTT
TGGAGTTCTCAAGTTCTGTCTAAATTTTTAAAACTGTTCGTGATTTTAAAAGTTATTTACATTTATCAAAAGATGTTCGG
AATTGTGTCGCATTTTCCTTACAGATGTTTTTGGAATTTCATAAATTATTTGCGTTAAAAATGAGCATTTTGAAATTGTT
CAAAAAACAATTCATGAAATGTTTGATTTTCTAACATGTTTAGATATATATTCGCTCCTTTCTGTTCTTATAAATGTGAC
TACCTAGCGTCATGTGCAGCCTTCAGGGCCAGTGGCTAGCCGGGGTTGCGCTCTGAATACGAGAACCAGAGTTGCAGTCC
TATGAATACGGTGTATAGCGTATTTTTCTTTTGTCGCCTAGTAATTTTTCATCGATCCTTATAAAAGACAACTGGCTTTG
TGTAGTTATATAAGAAAAAAGTTCGTTGTTATTACAAATGTACTAAAAATTTATTATCATTATGAAAATAAATAACAAAA
AATGGAAAAGAAAAAACGTAGCAGCACGAGTGATTGCGCTAATGGGCCGGCCCGATTCGTCTTAATGTCCTGCCAGCCGG
TCAACGCCCAGAATTTGACTTGCCACGTCAGCGAATACCAGCTAAACGGGCTCAAGGTTCAAAATAGACCGGATCAGAAA
GTTGGGTGTGCTGATTTTCGGGATTGCAAGTTCAAGGTTTGATTTAGCTTTCGTCTATAAGTTTAAGGTTTATTTTGGAC
TTTTTCCCTGCCCAAATGCCGTATGCCGATTTGTGGCTCGGTCGCTGGCGCGGCTAAGCAGAGCACCCGCAACGCGCGGC
CGCCGCACCACCTCGTGGCCC----CGAAGCCGCACCACCCACCCCACCCGCGCACGCGCATGCAATGCATGACGATCGA
CGCCCCGACGCCCACCGCCACGAGCACCGCCCATGGCCGGCTTCCTCCAGCGCCACGTCCTCCCGCCCTTCCGCCGCCCG
CCGCTCCCCTTCTTCCGCCACGGCGCCGGCGCCGCGTCCTCCGCCAACCAGCCCCAGGGCCGCCGGCCATGGACGCCCAG
CCGCATCCTCGACCCCGGGGACGACGTCGTCCTTAACTGGAACCGCCTCTTCCTCGTCACCTGCATGGTCGGCCTCTTCG
TCGACCCCATGTACTTCTACCTCCTCTACGCCAAGACGCAGGCGTGTGTCAAGATGAACATGGGCATCGGCGTCGCCGTC
ACCGCCGTGCGCACCGTCGCCGACCTCTTCTACCTCGCGCACATGATCCTCAAGTTCCGCACCGCTTTCGTCGCGCCCAG
CTCGCGCGTGTTCGGGCGCGGCGAGCTCGTCAGGGACCCCGACCAGATCGCCATCCGGTACCTCAAGAACGACTTCATCA
TCGATCTCGCCGCCATGCTCCCGATTCCCCAGGCATGCCTCCATCCCTCCCTCCTTCTCCCT---ACCTCTCCATCGTCA
ATGGGCATATCCACAGCGTCGACGCA---TTTCAAATCTGGCAATCTTTGTATATTTATCA-------------------
-TAAATTTTAGAAATGTCATTACAGTGTGATGAATTTTGGCGTGATACAGTT----AATCCGGTGTTCCTTGTGAAGGAC
ATGATTAATGTGCATGCAACGACACTGCATTCAGACCTTGATACAGCTTCCCTGATCAAATGTTGTGTCAGTTATATATA
TATACCTACTACTAATTCAGCTCAAATGTGTAAGCAGGAATGTTACAGAGAATCAAACACAATAGCTAGCTAGCTAGCTA
GCTAATTTGATGCGTTCGGCAATAGTCACATACTGAATACTCCTACTA---CGAGATAATTAAGCTGAGCAGGCCTATTG
TTGCAGATCATTATCTGGTTTGTGATACCAGCTGTGAGCACCACCTCAGCAAACCACACCAACAACACGCTGTCGATGAT
CGTGCTGATCCAGTACATACCCAGAGTGTTCCTCATCATATCCCTCAACTCCAAGATCGTCAAGTCCAGTGGAGTGGTCA
CAAGAACTGCCTGGGCAGGGGCTGCCTACAACCTGCTTCTCTACACACTCGCCAGTCATGTATGTATGCA---ATGCACG
CCGTCGTCTTCTGAGG-----------------------CAGAGGAATGGATTCATATGATACGTTAATGTATGTATGTA
CGTTAATTATGCAGGTTCTCGGCGCCCTGTGGTACCTCTTGTCCATTGAGAGGCAGTACACCTGCTGGGTGGACCAATGC
ACAAGCGATAATGGCACTGACCCCAGGGTGCCCATATGTGACATGAGCTATCTGGACTGCAAAACGCTTGAGGATCCTGT
TCGGATGAAGTGGCACGCGGCCAGCAACATCACTAAGCAGTGCGGACTTCCCGGGGCGAAATTTGAGTACGGGTTGTTCG
AGGATGCTCTGAAGCTCGATATCGTCGACGCGTCCTTCTTCGAGAAGTATCTCTACTGCCTCTGGTGGGGTTTCCGGAAC
TTGAGGTATGCATATGCATATATGTGTGTATAAGGATGCAGTTCTTTTGATGTCTGAACTGAGTATGCGATCATTATAAA
TAAATACATG-----------------------ATGATGCAAGGACAACTGAATTTGTGTTTGTTTTCTGCAAGTTCTTA
TGGACAGAACTTGCAGAACAGCACCTACGCAGGAGAGACTATATTCTGCATCCTCATCTGCATCATGGGCCTTGTTTTCT
TCTCACATCTCATTGGAAACATGCAGGTATTTATTTGTTTATTATCCTGAAAATGGATGCTCATTTTTCATGTTTTAGAA
ACTGTCCTAAAGCTGTGGATATTGCCCAAGTCGACATACAT----TGTT-------------------------------
---------------------------------------CATTGTTCCATCTTGCCTTTTT--TTTTTGCTTCGCAGACG
TACTTGCAGTCGATGACGGTGAGGCTGGAGGAGTGGCGGGTGAAGCGGCGCGACATCGAGGAGTGGATGCGTCACCGGCA
GCTTCCCCTGGAGCTCCAGGAGCGCGTCCGGAGGTTCTTCCAGTACAAGTGGCTGGCCACCAGGGGCGTCGACGAGGAAT
CCATCCTCCAGTCGCTGCCCCTCGACCTCCGCCGCGAGATCCAGCGCCACCTCTGCCTCGCCCTCGTCCGGCGGGTGCGT
TGCCACGCCATATGCCATTTTCTCTCCGCCGCCGGTACGGTACG-GTGACTCGGACGCTGAACGTCGGCATTAACCGTGG
TCTTGCT----TTGCAGGTGCCTTTCTTCTCGCAGATGGACGAGCAGCTGCTGGACGCCATCTGCGAGCGGCTGGTGTCG
TCGCTGAGCACCAAGGACGCGTACATTGTGCGGGAGGGCGACCCCGTGAGCGAGATGCTCTTCATCATCCGTGGCGAGCT
GGAGAGCTCGACGACGGACGGCGGCCGGACCAACTTCTTCAGCTCCATCACGCTCCGGCCGGGGGACTTCTGCGGCGAGG
AGCTGCTGACGTGGGCGCTGATGCCCAACCCGAGCCTCAACTTCCCGCAGTCCACGCGCACGGTGCGGTCGGTGACGGAG
GTGGAGGCGTTCGCGCTCCGGGCCGAGGACCTCAAGTACGTGGCCAACCAGTTCAAGCGCCTCCACAGCAAGCGGCTGCA
GCACGCGTTCCGGTACTACTCCCACCAGTGGCGGAGCTGGGGCGCCTGCTTCGTGCAGGGCGCCTGGAGGCGGTACAAGA
AGAGGAAGCTCGCCAGGGAGCTCATGAAGCAGGAGGGGCTCCTCTACGAC---CAG---------GGCGACGACGACGGG
CAAGGCGGGGCTGGCGCCATCGCCGGCGCCGACGCCAGCACGCCGCTGCTCGGCGAGTACAAGGGCGGCGCTGGCGCGGC
G---TCGTCGTCCGCGGAGGGCGCCGACGGCGGCGGCACGCACCTGGGCGCCACGTTCCTGGCATCCAAGTTCGCCAAGA
ACACCAAGAAGGGCGCGCACCAGAAGAGCATGTCGCAGCGGATCGACGACGTGTCCACCATGAAGTTCCCCAAGCTGGCC
AAGCCCGACGAGCCGGATTTCTCTTTGCACTCCGAGGACACGCTGTAAAAT-G------GAACACGATACGTACACTGCG
TGCAGCCGAAACCACTACCGTTTCTTCTCTTGTTCGGTTGTTCCTCCTCCTCTT---TTGTTGGGTCACT-AA-CGCTGG
TCAGGATCATGAAAGGGCTGCTGCGTAGATAGATGGAGCTGGAGTCGCATGTTGTACTGTACACTAGTGCTGATTTAGG-
-------------------------------AAAGTTGATCTTACTTGAGAAACACTTACCAATGTAAGTGTACTCCAGC
GATCCTGCCTGAATGTGAAAAGCTGACCAGACATGTTGTGACAAGTAAGAGCAACT------------------------
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>chr4A_23
ATTTG-----------------------AAATTTAGTAATGTTCACAAACTTCAAAACTGTTCGTGAATTTTTAAAATAT
TCACGAATTTTTCCCACCAATTAAGAAATTGATCAGGGATTTTAAAAA-GTTCACAAATTTTAGTGTGAAAAATAAATTT
AAGGGTAGAAAAGAAAAGAAAACCAG-AAAATAATAAAAGGAAAAAAAAGAAACAGGAAC---CCTCTACCAACTATACA
CACCTTTACAGTAGGGCCTCCGCGACCCCACAACCCTCGACGCACAAGGAAGTTCCAAATCTAGAGAGCCTAGTGATTCT
CGAAAAAAAAATCTAGAGAGCCTAGTATCTTTTTATTATTAACTGTGTGGTAGCGCAAACAAATGACGTATGACAAGCAC
TGCTTCTAGTTCCGCGGAGCTGACAACGTGGCTATGCGTTTTGGTTAGTTCTCCGGCTCCAATTCCGATCAATAAAAGTT
GGACAACCTCGGCTTCGTTGGGAGCGTGTGGGATTTGTGTTCTCGACTCTATCTGGCTGGATCTGAGATGTTATTTTTTT
CGATAAAGGGAAAGATCTGAGATGTTCTACAGGCCTTCTTTGATGTTTTATTCTCCGGAGCGACGATTCGCTATGTAAAC
TGTGGCCACCCGCGGCTTGGTCTACATCGGCGATTTTTCGACCGCTGCTTCTACAAGCTTTTGCATTTCAACAAGTTCGC
TCCCCGAAGACGGAGACCCTGATGCGACAATGAGCATGTAGGGTCATCTGGGTCAAGGAATTGAGGTGCCAAATTCACAT
ATAATGGATTCCGAAGAGTTAATTTAGGTTCGCACAACTTACAAATAATGTCGG-TTTTTTTTTTGTTAAAAAACATTGA
AGGGTC---GATTGGAGCTG---------TAGAAATTTGCTTGGGGAGAGCAGAG-----------CACCC---------
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---------GCCCAAATGCCGTATGCCGATTTGGGGCGAA-----------------GCAAAGCACCCGCAACGCGCGGC
CGCCGCACCACCTCGTGGCCCCGATGGAAGCCGCACCACCCACCCCACCCGCGCACGCGCATGCAATGCATGACGATCGA
CGCCCCGACGCCCACCGCCGCGAGCACCGCCCATGGCCGGCTTCCTCCAGCGCCACGTCCTCCCGCCCTTCCGCCGCCCG
CCGCTCCCCTTCTTCCGCCACGGCGCCT---------CCTCCTCCAACCAGCCCCCGGGCCGCCGGCCATGGACGCCCAG
CCGCATCCTCGACCCCGGGGACGACGTCGTCCTTAACTGGAACCGCCTCTTCCTCGTCACCTGCATGGTCGGCCTCTTCG
TCGACCCCATGTACTTCTACCTCCTCTACGCCAAGACGCAGGCGTGCGTCAAGATGAACATGGGCATCGGCGTCGCCGTC
ACCGCCATGCGCACCGTCGCCGACCTCTTCTACCTCGCGCACATGATCCTCAAGTTCCGCACCGCCTTCGTCGCGCCCAG
CTCGCGCGTCTTCGGGCGCGGCGAGCTCGTCAGGGACCCCGACCAGATCGCCATCCGGTACCTCAAGAACGACTTCATCA
TCGATCTCGCCGCCATGCTCCCGATTCCCCAGGCATGCCTCCGTCCCTCCCTC---CTCCCT---ATCTCTCCATCGTCA
ATGCACGTATCCACAGCGACGCATTTCTTTTTCAAATCCGGCAATCTTTGTACCTATGTTGCTCGTCGCA------TGTG
TCAAATTTCAGAAATGTCATTACAGTGTGATGAATTTTGACGTGATACAGTCAATCAATCCTGTGTTCCTTGTGAAGGAC
ATGATTAATGTGCATGCAACGACAGTGCATTCAGACCTTGATACAGCTTCCCTGATCAAATATTGTGTTAGTTATAT---
------------------AGCTCAAATGCATAAGCAGGAATGTTTCAGAGAGTCAAACACAATAGCTAGCTAGCTAGCTA
GCTAATTTGATGCGTTCGGCAATAGTCACATACTGAATACTACTACTAGTACGTGATAATTAAGCTGAGCAGGCCGATCG
TTGCAGATCATTATCTGGTTTGTGATACCAGCTGTGAGCACCACCTCAGCAAACCACACCAACAACACGCTCTCGATGAT
CGTGCTGATCCAGTACATACCCAGAGTGTTCCTCATCATATCCCTCAACTCCAAGATCGTCAAGTCCAGTGGAGTGGTCA
CAAGAACTGCCTGGGCAGGGGCCGCCTACAACCTGCTTCTCTACACGCTGGCCAGCCATGTATGTATGCATGCATGCACG
CCGTCGTCTTTTGTGTTCCTCGTTCCATTTCGAACAGAACAGAGCAATAGATTCACATGGTGGGTGTATGT---------
-------TATGTAGGTTCTGGGAGCCCTGTGGTACCTGCTGTCCATAGAGAGGCAGTACACCTGCTGGGTGGACCAATGC
ACAAGCGATAATGGCACTGACCCCAGGGTGCCCATATGTGACATGAGCTATCTGGACTGCAAATCGCTCGAGGATCCTGT
TCGGATGAAGTGGCACGCGGCTAGCAACATCACTAAGCAGTGCGGACTTCCCGGGGCGAGATTTGAGTACGGGTTGTTCG
AGGATGCTCTGAAGCTTGATATCGTCGATGCGTCCTTCTTCGAGAAGTATCTCTACTGCCTCTGGTGGGGTTTCCGGAAC
CTGAGGTGTGCATACA--------TGTATATAAAGATGCAGTTCTTCTGATGTCTGAACTGAGT----------------
-------ATGCGATCATTATAAATAAACACATGATGATGCAAGGATAACTGAATTTGTGTTTGTTTTCTGCAAGTTCTTA
TGGACAGAACTTGCAGAACAGCACCTACGCAGGGGAGACTATATTCTGCATCCTGATCTGCATCATGGGCCTTGTTTTCT
TCTCACATCTCATTGGAAACATGCAGGTATTTATTTATTTGTTATCATGAAATTGGATGCTCATTTTTCATGTTTCAGAA
ACTGTCCTAAAGCTGTGGTTATTGCCCAAATCAACATAGTGCAGAAAATTCTCAAACTTATGCTTTCATGTGCAAGAATT
ATTATCACCAGAAACTGTTCGCACCATTATGTTCACATACATTGTTCCATCTTGGCC-------TTTTGTTTCGCAGACG
TACTTGCAGTCGATGACGGTGAGGCTGGAGGAGTGGCGGGTGAAGCGGCGCGACATCGAGGAGTGGATGCGTCACCGGCA
GCTTCCCCTGGAGCTCCAGGAGCGCGTCCGGAGGTTCTTCCAGTACAAGTGGCTGGCCACCAGGGGCGTCGACGAGGAAT
CCATCCTCCAGTCGCTGCCCCTCGACCTCCGCCGCGAGATCCAGCGCCACCTCTGCCTCGCCCTCGTCCGGCGGGTACGT
T-----GCCATATGCCATTTGCTCTTCGCCGCCGGTACGGTAAG-GTGACTCCGACGCTGAACGTCGGCATTGATCGTGG
TCTTGC-----TTGCAGGTGCCCTTCTTCTCGCAGATGGACGAGCAGCTGCTGGACGCCATCTGCGAGCGGCTGGTGTCG
TCGCTGAGCACCAAGGACGCGTACATCGTGCGGGAGGGCGACCCCGTGAGCGAGATGCTCTTCATCATCCGTGGCGAGCT
GGAGAGCTCGACGACGGACGGCGGCCGGACCAACTTCTTCAGCTCCATCACGCTCCGGCCGGGGGACTTCTGCGGCGAGG
AGCTGCTGACGTGGGCGCTGATGCCCAACCCGAGCCTCAACTTCCCGCAGTCCACGCGCACGGTGCGGTCGGTGACGGAG
GTGGAGGCGTTCGCGCTGCGCGCCGAGGACCTCAAGTACGTGGCCAACCAGTTCAAGCGCCTCCACAGCAAGCGGCTGCA
GCACGCGTTCCGGTACTACTCCCACCAGTGGCGGAGCTGGGGCGCGTGCTTCGTGCAGGGCGCCTGGAGGCGGTACAAGA
AGAGGAAGCTCGCCAGGGAGCTCATGAAGCAGGAGGGGCTCCTCTACGACGGTCAGGGCGACGCCGGCGACGACGACGGG
CAGGGCGGGGCCGGCGCCATCGCCGGCGCCGACGCCAGCACGCCGCTGCTCGGCGAGTACAAGGGCGGCTCTGGCGCGGC
GGCGTCGTCGTCCGCGGAGGGCGGCGACGGCGGCGGCACGCACCTGGGCGCCACGTTCCTGGCATCCAAGTTCGCCAAGA
ACACCAAGAAGGGCGCGCACCAGAAGAGCATGTCGCAGCGGATCGACGACGTGTCCACCATGAAGTTCCCCAAGCTGGCC
AAGCCGGACGAGCCGGATTTCTCTTTGCACTCCGAGGACACGCTGTAAAAAGGAACACCGAACACGATACGTACACTGCG
TGCAGCCGAAACCACTACCGTTTCTTCTCTTGTTCGGTTGTTCCTCCTCCTCTTCCTTTGTTGGGTCACT-AAACGCTGG
TCAGGATCATGAAAGGGCTGCTGCGTAGATAGATGGAGCTGGAGTCGCATGTTGTACTGTACACTAGTGCTGATTTAGT-
-------------------------------AAAGTTGATCTTACTTGAGAAACACTTACCAATGTAAGTCTACTCCAGC
GATCCTGCCTGAATGTGAAAAGCTGACCAGACATGTTGTGAGAGGTAAGAACATCTACGACAAAGGCCCTTATACGTCTG
CGGACGCATCTGAACACGCCACAGTGACCGGGCACATATCAAAAGTCCGTCTCCACAGCAT-------GCTTCCTCAAAC
AAAATCCTCAAATCTATACTAGTTTCATGCAACGTGAAATTACA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------TACGTAATTAAATACACATGTTATCGGA
CTATCAAAATTTGACATGTTCTAG-TAGCTATGATAGTGAAAGAAGTTCATCCACGACTACCCTTGCCCCCTTGTCGTCT
TGGTTGGTCGA-----------AGATGCAAAACGGATCAAGGCAATCTGCTCACTCTCGGAGCTGTCCAATCCGTCACGG
TCCT----------------------------------------------------------------------------
-----------------------------------------------
>SNPs
--------------S--S---------S----------------------------------------------------
----------------------------------------------------S---S-------------------S---
------------------------------S-----------------------------SSS-----------------
-----------S-----------------------S-----------------S--------------------------
----------------------------S------------------------S--------------------------
------------------------------------S-------------------S--S-----S-----S--------
--S---------------S-----S---------------------------S---------------------------
-------------------------------S--------S--------------------------SSSS---------
-----------------------------------------------S-----SS-S----------------------S
-S-----------------------S------------------------------------------------------
-----------S----------------------------------------------------S---------------
------------------------S----------------------SS-S----SSSSSSSSSSS--------------
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---------S---S-----S-S----------------------S-S-------S-S-----------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-----S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------S-------S-SSSSS---------------
-SSS----------------------------------------------S------S-SS-SSSSSSSSSSSSSS----
---------------------------------S----------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------S-----------------------------
---------------------------------------------------------------S----------------
-----------------------S--------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
---------------------------------------------S--------------------------S-------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-------------------------------------------------------------------S-------S-S--
SS-SS---SS-------------------------------SSSS-----------------------------------
----------------------------------------S----S-----------S---SS-----------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
-------------S------------------------------------------------------------------
-----------------------------------S-----S-SS------------------------------S----
-------SSSS---------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
----S-----------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S---------------------------------S----------------------------
-----------------------S----------------------------------------------S---------
-------------------------------------------------------------------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------S------------------
------S-----------------------------S----------------------SS-SSSSSSSSSS-SS-----
------------------------------S------------------------SSSSSSSSSSSSS---S--------
S--------------------S-----S-S-SSSSSSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--S--S--S-S------S--S---
---S--------SSSSSSS-SSSSS------S-SS-S-----S-------------------S--SS-------S--S--
------SSSS-SSSSSSSSSSS----------------------------S----S------S----------S--S---
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_437
--------------------------------------------------------------------------------
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-----------------AGCTGACAACGTGGCTATGT-------------------------------------------
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>reverse_3784
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-----------------------CATACCAGCTGTGAGCACCA-------------------------------------
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>forward_3345
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---------------------------------------------ATCCCTCCGTCCTTCTCACA---------------
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>reverse_5196
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---------------------------------------------------------------------------TGTGG
TCTTGCTTGCATTGC-----------------------------------------------------------------
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>forward_4858
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--------------------------------------TCGTTGTCCCATCTTGGCTC----------------------
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>reverse_6466
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-----------------------------------------------------------------CCGGCTCCCTCAAAC
CAAAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
