>input_sequence_25509
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---------------------------------------------------------------------------ATTTT
AAAGGCTGGAAACCCAGAAATCAGTCCCAGTCCCACTACGCACAGATAGGTAAGGAACTTGAATTAAAAGTTAAAACCCA
TACCCGTCCGAAGTTATTTGATTTAATTCATATCTATCCTATTAAGTCCCTACCAG------------------------
--------------------------------------------------------------------------------
------------------------------CTAGCCAATCTAAGCTGGTTAACTGTTTTGTGCTATCGTCGAATCGTTTC
AAGTCAATATTTGATCTGAACTTAATATTTTCATAGTATTATTACAGTTTTAAAGATAAACTGGTATTGTAACTACATTA
GTTTCCGGATTCCTGGAACCGGCTTGTTCAG--------TTGCTGTTTCCAGCTGATTCTTGGCATCTTTTTCTTTGGCA
TTGAGTTATATGCCATAGGGCTGGCAAAAAACCAGTGCTCGTGGACCCGACAGT-------------------TGTTTGC
CTGCAGACAACATGGATACTGCAATGACATATGTTTTTCAAAAATAATCTGTTGACGTTTATAGTC--------------
----------------------------TACTCCCTCCGTCTCAGAATTCTTGTCTTAGATTTGTCTAAATACGGATGTA
TCAAGTCACGGTTTAGTATTAGATACATCCGTATCTAAATCTAAGACAAGAATTTTGGGAGGGAGGGAGTAATATATACT
TGTGTTGGTGCATAAGAAGTAGTCGGAGATTCCTTTTTGTCCATTGTAATCTTTGTTATTATTGACTACTTTCCTTTTT-
CCCACCTTTTAATGATTGGAACCAGGTGACTA--TCCTTGGACGTACCTATTGTCTTTAATTTTGA---CGGACATGGTG
ACTGAAGAATATGACAGTAGCTATGATATTGACGTTGATGAGTTGGTCATTTCCATGAGGACAGATCTGAATCGCTTCAT
GTCACAGGCCGAGGATCGCGAAAAAGGAAACAGGTGTTGCCTGATATGCAAGATAGTCCATCGTATTCGGCAAACTGACA
TTAATGCGTATGAGCCGAGTGTTCTCTCAATTGGGCCTTATCACCATTCAGAACTGCCACTTCTAGCAATGGAAACAGAG
AAGTGGATATGTCTGGAGTATGTTCTTAAACTAAACTGTGAAGTTAGCTTGCGTGAGTACCTGAGCTTGATCTCTGGCCT
GGAGAAGGAAGCAAGAGCCTATTACACTGAGGAGATAAACATGGATAGTAGAGAATTCATGCAGATGCTTCTGTTAGATA
GCTGCTTTGTTCTTGTGTACCTTGGGGGCGTGCAGGCACAAGTAGCTTCCATAAATGGTGAACAGTTGAAGGAAAATGTG
ATAGACGAGAGGAAGAGGGAAGCAACGGACTTGAGCCACATGGATGCAGTATGCTGCGAAAGTGTGAGTGGGCACACAGC
AGTTGACATTGAACTAAATCAAGTTGGTGAAGAGACTAA---TAGCCAGAACCAGGGGAATTACAGTGGCACTGTAGAAT
GGTATAACAGTTCTGCTGTCTATGACCTACTTTTGCTGGAGAACCAAATTCCCTTCTTTATTGTCAAGATAATTTACCAG
CTCTTCTCACGCAATGTAGCAACCACTTCAGTGTTTACCAACAGCATTTCTGAATTCATGGAAGGCATTCTTTACCATTT
CCCCAAAGTAATATCTGAGGCAAATAGGCCAGAAGATTTTTATCATCTGCTACACCTGTGTCATAAGTACCTGAAACCAA
GTCACAAGCTGGACGATGACCATCACCGATATGCTGCAAAATCTCACTGCTTCCACTTTATGATTGATATCGGACGCATG
ATATTCACTTTTGGACGGGAGAAAAACACGATCGATGAGCGAAACATGTTCCATGAGCTAGATTGGTCAAATTCAGTCCA
AAAGTTTAGTCGGTGGCATAGAGCAGTGGACTATCATGAAGCAGGAATGCAGTTTAAAAAGAGGGAGTTTGGAGAAGAAA
AATCTCATCTT-TATTGGACATTAGATTCAGGAACGGTCTCATGGAGATGCCATGTTTGCCAATAGATGATAAGTCTTCT
TTGCTTTTCAGAAACCTTGTAGCTTTTGAGCAAACATGTCCTCAAGTTGGGGATGACATCACTGCATATGTTGTGCTCCT
GTCCCAGCTTACTAGTACGGCTGCTGATGTTGCTCTTCTAGCTCAGAAAGGGATTATAGTGCACCAGTTGGAAAGCGACG
AGGATGTATCGACTCTCTTCACCAAACTTTTTGAGTATGTGGCATTTGATTTCAATGGCGAACACTACCTGAAATCCCTA
TGCTGTGCCATGGAAGCACACTACCAAAGTCGTATTAACAGGTGGATGGCGTGGCTGTGGCATAATCATTTCAGTAATCC
ATGGGTAGGTTTTGCCGCGATAGCTTCTGCTTTTATAGTTCTATGCAGTATCATGCAAACTGTTCTTGCTTTCTTGTCGT
ACATATGATGAAGCAACAGCTTCATGTTTAAGAGTTGCTTGCAGATATGCCTCGAAAGTAAAGTTTTTCCATTTTTGCTG
TCACAAAGAGAACCCTGGGGTGTACTCTCAAAGATTGGGTGTTCTACAGTGAGCTTGCATAGTGCTGCGACATATCCAGC
ACAAATCTTGTCTCATGATTTGAGCTATATTTGCCCCATGATATTGACAATTATAGAGGTAATAACAGGTTAAAACGGAA
TTGATCAGAACTCTTTTTGAAGAATTTATCATGCCAATGATTTCCAGACAATCAAGCATAGGTTTCCAAGATATTGTAGG
TAATCCAATTGCATGCGTTTCAATTTTCTTTGCAAAACAGTCATTTCGATCAAAATTATGTAGTTTTGTGTTGTTCCGTC
GCTGTTGGACCATTTGTTACAAGATGGAACAAGATAATGGTATGGCTGACGCTCATCCTCGCTGCCTGATTCCTCACTGT
AATGGTTGTGTCCTTGTGCCAATCAGAGTGGATTGACGAAGTGGTGTTGGGGTACCATGAAGATGTTTGAGCCCCATTCA
TCACTGAGTTTACATTGTCGCCATCGACAGCATGCCCTTCATGTTCCGAAATCGTTCACTCGCT----------------
--------------------------------------------------------------------------------
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------------------------
>chr1D_1_TraesCS1D01G099400
CAGAACGATTGGAGATCCAGCTACGTTGGAGGCCTTGTCTATAAAGAGAAGCTCTAGCTCTTGCTGATGATCTGTACCTT
CAACGAATTCTTGTTGCTTCGGACTGTAGAGGAGTTGTGGATGAAATCCAGAAGGATGGTGCATCGAACGATGGTGCAGT
AACTCAGGAGATTAAATTGCATTCAGTTTCTTTTATTTCTTGTAAGATAGTTCATAAATTTAGAAGCTCAAACTTTGATA
CTCACAATCTTGCCAAGTATGCGTTGTGTCTTGGGACTGGTTGCTATGTATAGTTAGGCCAGCCTGAAGGTATTCCCTTC
GTCCATGTAAGCATTGTGACGGTTGAATAAAACTTCGCTGGGTTGCGTAAAAAAACAGGAAAAAAAAGATGCCATTAACA
TTATACTATTTAGATGTGAGATTCACGTTAGATATGACATAGACGGACAAAAAAACAACCTCCAGCCCAACATAACCGTC
CCATGAACTCCCGAAGATGTAGGATCATCCGCCTCGTTCCCCAACC--AAAACATTCCTTGACG--------AACCACTG
ACAGAGTGACAGATTCCTATCCCATCTCCAGCATACCTCGATCCTTCGCCACCCGCCATTCTTCCTCCTCGCAAAAACCA
GAAGCTAGGTTTTGCGCCCCTCGTCGGACGGTCGCT-CTCCCTCCCGCCGCCGCAGACGAGCCGCCTA--GGGTACGCCC
--------------GTTTTGATGGACATTTTCTCTTTGGTTAAATCCAGCCCAAAAATAAAATTTAATTTGAAGAAATGT
AGGCCTCGTGTATGGTTATTCTGAAATTTTCTCTGCCGCTTTTGAGTTCAGCCGGGTTAATCCGCCTGGCCTGCGAAGCT
G-AAAGGGGTATTTTGTTCTGTGCCGCTTCGACACGTTTTATGGTGAATTGATTGAGTGGAGGAGGCCTGTGCCTGAGGA
GAATGCGGGATTATACTCCATAAT-------CTATGCATATGTAAACAACTTCTGGGGTTCAGGGCATCTCATCCATTTT
AAAGGCTGGAAACCCAGAAATCAGTCCCAGTCCCACTACGCACAGATAGGTAAGGAACTTGAATTAAAAGTTAAAACCCA
TACCCGTCCGAAGTTATTTGATTTAATTCATATCTATCCTATTAAGTCCCTACCAG------------------------
--------------------------------------------------------------------------------
------------------------------CTAGCCAATCTAAGCTGGTTAACTGTTTTGTGCTATCGTCGAATCGTTTC
AAGTCAATATTTGATCTGAACTTAATATTTTCATAGTATTATTACAGTTTTAAAGATAAACTGGTATTGTAACTACATTA
GTTTCCGGATTCCTGGAACCGGCTTGTTCAG--------TTGCTGTTTCCAGCTGATTCTTGGCATCTTTTTCTTTGGCA
TTGAGTTATATGCCATAGGGCTGGCAAAAAACCAGTGCTCGTGGACCCGACAGT-------------------TGTTTGC
CTGCAGACAACATGGATACTGCAATGACATATGTTTTTCAAAAATAATCTGTTGACGTTTATAGTC--------------
----------------------------TACTCCCTCCGTCTCAGAATTCTTGTCTTAGATTTGTCTAAATACGGATGTA
TCAAGTCACGGTTTAGTATTAGATACATCCGTATCTAAATCTAAGACAAGAATTTTGGGAGGGAGGGAGTAATATATACT
TGTGTTGGTGCATAAGAAGTAGTCGGAGATTCCTTTTTGTCCATTGTAATCTTTGTTATTATTGACTACTTTCCTTTTT-
CCCACCTTTTAATGATTGGAACCAGGTGACTA--TCCTTGGACGTACCTATTGTCTTTAATTTTGA---CGGACATGGTG
ACTGAAGAATATGACAGTAGCTATGATATTGACGTTGATGAGTTGGTCATTTCCATGAGGACAGATCTGAATCGCTTCAT
GTCACAGGCCGAGGATCGCGAAAAAGGAAACAGGTGTTGCCTGATATGCAAGATAGTCCATCGTATTCGGCAAACTGACA
TTAATGCGTATGAGCCGAGTGTTCTCTCAATTGGGCCTTATCACCATTCAGAACTGCCACTTCTAGCAATGGAAACAGAG
AAGTGGATATGTCTGGAGTATGTTCTTAAACTAAACTGTGAAGTTAGCTTGCGTGAGTACCTGAGCTTGATCTCTGGCCT
GGAGAAGGAAGCAAGAGCCTATTACACTGAGGAGATAAACATGGATAGTAGAGAATTCATGCAGATGCTTCTGTTAGATA
GCTGCTTTGTTCTTGTGTACCTTGGGGGCGTGCAGGCACAAGTAGCTTCCATAAATGGTGAACAGTTGAAGGAAAATGTG
ATAGACGAGAGGAAGAGGGAAGCAACGGACTTGAGCCACATGGATGCAGTATGCTGCGAAAGTGTGAGTGGGCACACAGC
AGTTGACATTGAACTAAATCAAGTTGGTGAAGAGACTAA---TAGCCAGAACCAGGGGAATTACAGTGGCACTGTAGAAT
GGTATAACAGTTCTGCTGTCTATGACCTACTTTTGCTGGAGAACCAAATTCCCTTCTTTATTGTCAAGATAATTTACCAG
CTCTTCTCACGCAATGTAGCAACCACTTCAGTGTTTACCAACAGCATTTCTGAATTCATGGAAGGCATTCTTTACCATTT
CCCCAAAGTAATATCTGAGGCAAATAGGCCAGAAGATTTTTATCATCTGCTACACCTGTGTCATAAGTACCTGAAACCAA
GTCACAAGCTGGACGATGACCATCACCGATATGCTGCAAAATCTCACTGCTTCCACTTTATGATTGATATCGGACGCATG
ATATTCACTTTTGGACGGGAGAAAAACACGATCGATGAGCGAAACATGTTCCATGAGCTAGATTGGTCAAATTCAGTCCA
AAAGTTTAGTCGGTGGCATAGAGCAGTGGACTATCATGAAGCAGGAATGCAGTTTAAAAAGAGGGAGTTTGGAGAAGAAA
AATCTCATCTT-TATTGGACATTAGATTCAGGAACGGTCTCATGGAGATGCCATGTTTGCCAATAGATGATAAGTCTTCT
TTGCTTTTCAGAAACCTTGTAGCTTTTGAGCAAACATGTCCTCAAGTTGGGGATGACATCACTGCATATGTTGTGCTCCT
GTCCCAGCTTACTAGTACGGCTGCTGATGTTGCTCTTCTAGCTCAGAAAGGGATTATAGTGCACCAGTTGGAAAGCGACG
AGGATGTATCGACTCTCTTCACCAAACTTTTTGAGTATGTGGCATTTGATTTCAATGGCGAACACTACCTGAAATCCCTA
TGCTGTGCCATGGAAGCACACTACCAAAGTCGTATTAACAGGTGGATGGCGTGGCTGTGGCATAATCATTTCAGTAATCC
ATGGGTAGGTTTTGCCGCGATAGCTTCTGCTTTTATAGTTCTATGCAGTATCATGCAAACTGTTCTTGCTTTCTTGTCGT
ACATATGATGAAGCAACAGCTTCATGTTTAAGAGTTGCTTGCAGATATGCCTCGAAAGTAAAGTTTTTCCATTTTTGCTG
TCACAAAGAGAACCCTGGGGTGTACTCTCAAAGATTGGGTGTTCTACAGTGAGCTTGCATAGTGCTGCGACATATCCAGC
ACAAATCTTGTCTCATGATTTGAGCTATATTTGCCCCATGATATTGACAATTATAGAGGTAATAACAGGTTAAAACGGAA
TTGATCAGAACTCTTTTTGAAGAATTTATCATGCCAATGATTTCCAGACAATCAAGCATAGGTTTCCAAGATATTGTAGG
TAATCCAATTGCATGCGTTTCAATTTTCTTTGCAAAACAGTCATTTCGATCAAAATTATGTAGTTTTGTGTTGTTCCGTC
GCTGTTGGACCATTTGTTACAAGATGGAACAAGATAATGGTATGGCTGACGCTCATCCTCGCTGCCTGATTCCTCACTGT
AATGGTTGTGTCCTTGTGCCAATCAGAGTGGATTGACGAAGTGGTGTTGGGGTACCATGAAGATGTTTGAGCCCCATTCA
TCACTGAGTTTACATTGTCGCCATCGACAGCATGCCCTTCATGTTCCGAAATCGTTCACTCGCTATAAAGACAACATTTT
TTTTGTTTCTGCGATGAAATAAGGGTAGCATTGAGCTTGGTGTTACTGACGGACTTAAGCATCAGGTTTATGGCCTCCTT
GCATGACAGCGCATCAGGTGGATTCTCTGGATTCCCAGTCATCTAAAGATGGACAAACTGTCGAAACTTCATGGACTAGC
TTAAGCTCCTGCCACAAAGAGATAAGGTTTTCACCTGTTGACTCTGGCCTGAACTGTTCAGGAGGCTTAACGAAATGTAT
CTCAATGAAACAATCAAGTGGACAAGAAGCATTTGAATGTGATGGGTTGGGTTTTTGGAAGTTACAGAAGTACGTTCAAA
CTATATATTTACATGTTTTCCTCTCTGTTCTCCATGGGTTTGCATATATAGGAATTAAGCATATCCTGTGGCCGAGTGCT
ACTACTGTCCTATATTAGCAGAAGCCGTCGTCAGCACGATTAACCGATGATATTGCTGAACCGAATTAATACCAGCAATT
ACTGTTAAAACAGCCTCTCAGAGATGGATGTATCATTCCACGCGTTGAAATGCAGAGCCTGTGTATATACAGACGTACAT
ATATCTGTCTATATATTTCCCCCGTCTTCCTTTATTTATACTGTAATAATACTATAAGATATCAGCTCGCATGTTTGCAG
ATTAATAACTGGTCTCCACTTGCTCTCTTAACAAAGTCTCTCTTCCTTGGCGCCCCCGCTTGTGCGTGCGACCTTGGACG
CACAGGGTGGGTTCATAGGCGGACGGAATATCGGTTCACGGACGGCGATCCCCTTCGATTCAGAGAAGCCGCCGTTTTGC
TCTAGGTAAGAAAGAGAGGCAAACTCGTTTACACAGTGAAGTAGAAGAAGAAACAAAAGGCATAGGTAAGCGACTGCGTA
ACATACCGAGCGTGGTGCCCAAATGGTTCTCCTTGGCGATGGCTGCTGGAGCATCTCTGCCAGCAGCAGCAGAAGAGATC
ACCAGCAACAGCATGGCCGCGAGG
>chr1A_485
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GAACTCCCGAAGATGTAGGATCATCCGCCTCGTTCCCCGAACTACTGACAGATTTCCATGTAAAAAAAAACCAC--
------TGACAGATTTCTGTCCCGTTTCCAGCGTACCTTGATCCTTCGCCACCCGCCATTCTTCCTCCTCGCAAAGATGA
GAAGCTAGGTTTTGCGCCCCTCGCCGGACGGTCGTTTCTCCCTCCCTCCACCGCAGGAGGTGCCGCCTGGGGGTACGCGC
TTTCTTCTGCTCTTATTTCGATGGTCATTCCCCCCCTGGTTAGATCCACCTAATAAACAAAACAAAATAAACGAAGACCT
TC-----GTGTATGCATTTTG----------------------GATTTCAGCCTGGTGAATCCGCCTGACCTGCAAAGCT
GGAGAGGCGGGTTTTGATCTCCGTCGGCGACAGGGATGCAGAGTGAACCGGGGTGCGAGAACACATAA------------
--------------------------------------------------------------------------------
------TAGGAATCTCCACATTAATCTCGATCCATACAAATAGGTAG-----ATGGAGTTGAATTGGTAT-------CCA
TC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TAATGTGTTGTTTTATTGCATCCTCTTATTGCT-
TACATTC-----------------------------------------------------TTTTGA---CAGATATGGCG
ACCGAAGAATACGACAGTAGCTATGATGTTGATATTGATGAGTTAGCTATTTCCATGAGGACAGATTTAAATCGACGCAT
GTCACTAGTTGAGGATCGCGGAAAAGGAAACAGGTGTTGCCCGATATGCAAAATAGTGCACCGCATTCGCCAAACTGACA
GTAGTGCATATGAGCCAAGTATTCTTTCAATTGGCCCTTATCATCATTCAGAGTTACCACTTCAAGCTATGGAAGCAGAG
AAGTGGATATGTCTAGACTATATTCTTAAACTAAACTGTGAAGTTAGTTTGCGCGGGTGCCTGAGTTTGATTTCTGGACT
GGAAAAAGAAGCAAGAGGCTATTACACCGAGGAGATAAACATGGATAGTGAAGAGTTCCTGCAGATGCTTCTACTAGATA
GCTGTTTTATTCTTGTGTATCTTGGCAATATATACGCACAAGGTGCTACCGTTGATGATGCGCAAATGACAGAAAACATG
ATATACGAGGGAAAGAGGGAAGCAAAGGACTTGAGCCACATGGATTCCGCCCCCTGCCAAAGTTTGAGTGGGCACTCAGC
AGTGGACATTGAACTAAATCAAATGGACACACATACTGA---TAGTCGGAACCAGGGGGATTATAGTGGCACTGTAGAAT
GGTATAATAGTTCTGCTGTATATGACCTACTTTTGTTGGAGAACCAGATTCCCTTCTTCATTGTCAAGACAATTTATCGG
TTCTTCTCACGTCATGTGGCAACTACTTGGTTACTCACGAATAACATTTCTGAATTCATGGAAGGCACTCTTTACCATTT
CTCGAAAGTAATAACTGAGGCTAATAGGCCAGAAGATTTTTACCATCTGCTGCACCTGTGTCATAAGTACCTGAAACCTA
GTCACAAGTTTGAATATGACTATCATCAGTATGCTGCAAATCCTCATCGCTTCCAATTTGTACTTGATGTTAGCCGCAAG
ATCTTCACTTGTGGAGAG------------------GAGCAAAACATGTTCCATGAGCTAAATTTGTTAAATTCAATGCA
GCAGGCCAATCGATGGCGTAGGGCTGTGGAATATCATGAAGCGGGAATGCAGTTCAAGAAAAGGGAGTTTGATGAAAACA
ATCCTCATTCCCTATTGGACATTAGATTCAGAAAAGGTCTCATGGAATTACCATGTTTGCTGATCGATGATAAGTCTTCT
TTGCTATTCAGAAATCTTTTAGCTTTTGAGCAAACATGTCGTCAAGTTGGAGATGACATCACTGCATATTTTGTGCTCAT
GTCCCAGCTTGCTAGTACGTCAGCTGATGTGGCTCTTCTTGCTCAGAAAGGGATTACAGTGCACCAGATGGAAAGCGATG
AGGATGTATCAACTCTCTTCACCAAGCTTTCTGAGTATGTGGCGTTTGACTTCAATGGTGAACACTACCTGAAATCTCTG
TGCTGTGTCATGGAAGCACACTACCAAAGTCGTATTAATAGGTGGATGGCATGGCTATGGCACAATCATTTCAGCAACCC
ATGGTTAGGTTTTGCTGCCATAGCTTCGGTTTTCGTAGTCCTCTGTAGTGTCATGCAAACTGTTCTTGCTTTCTTAGCAT
ACATGGGATGAAG-------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>chr1B_486
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----AACTCCCAAGGATGTAGGATCATCGGCCTTCTTCCCCAACCAAAAAACATTCCTTCACG--------AACCAC--
------AGACAGATTTCTGTCCCATCTCCAGCATAGCTCGATCCTTCGCTACCCGCCATTCTTCCTCCTCGCAAAAACCA
GAAGCTAGGTTTTGCGCCCCTCGTTGGACGGTCGCTTCTCCCT-CCGGCGCCGCAGACAAGCTGCCTA--GGGTACGCGC
ATTCTTCTGCTCGTGTTTTGATGGACATTTTC-CCCTAGTTAAATTCACGGAAATAATAGAAACAAATTAGTGAAGGCCT
TA-----GTGAATGGATATTCTGACATTTCCGCTGACGCTTCTGATTTTAGCCTGCTGAATCCGCCTGAACTGCGAAGCT
GGAAAGGGGTATTTTGATCTCTGCCCTTTCAACACGTCTTAAGCCCGCATTACTCTCCTCAGTCACCGGCCTCCTT----
-----CGGGATTATATAGTTATACTACAGTACTATGCCAATATAAACAACGGTTGGGATTCAGGCCACCA---------T
GAAGGGTAGAAATTCATACATTAATCTCAGTTCCTACAAGTAGGTAA---TAATGAAGTTGAAGTAAAAT-------CCA
TGCCCATCCAAAGGAACTCGATTTGGTCCATATCTGTCCAAACAAGATCCTATTTTACTAAGGCCTTCACAATTCACGGA
AACTAGCCTTTTCACGGTACATTTTTTATACTGTTGCAGGAATCATTAGTCCTAGCATATAAAAACAAGTTTGCGGAAAT
GTATCGACAAATTAGTGAAACAACTGTTGTCTAGCCTGTCAAAGCTGGTTAACTGTTTTCTGCTGT--TTGAACGATATC
AAGTTGATCTTTGATGTA----------TTTCATAGTATTTTTACAGTAGTGAAGATAAATTCCTGTTATAAGTCGATAT
GTTTTCTGTAATTTGTCAGGTGTGGAAACTAGCCATTCCTGCCTTTTGGCAGTTGATTCCGGGCCTATTATACTTTTAGT
GTGAGCTAAGATTCATACTTGAGGTTAAATTATATGCTAGGACTGCTGATTGTCGATCTCTGGCAGCCAGCAATGTTTAC
CTGCAGACCACTGGAATCCTGCAATGTCATATGTTTGATGGCATTTCTTTCGAAGCAAACCATTTGTCAAATTGTTTGTG
CAATGAAAAGTATAGTTAAAACCTTTTGTACTCCCTCCGATCCATATTACTTGTCGCCCAAAAGGATGCATCTAGTGTAG
ACTTAT-----TTCAGTGTTAGATATATCCATTTGAGT------GACAAGTAATATGGATTGGAGAGA------------
---------------------------------------------GTATCATTTTTTCTTAGTGCTTACTTTCTTTTCCC
CCCACCTTTTAATGACAGAAACAAGGTTGCGTTCTCCTTGGGCGTACTGAACTCCTGACTGTCTTTTGTCAGATATGGTA
ACCGAAGAATATGATAGTAGCTATGATGTTGACATTGATGAGTTATTTATTTCAATGAGGACAGATTTAAATCGCCACAT
GTCGCAGGCTGAGGATCGTGCAAATGGAAACAGGTGTTGCCTGATATGCAAAATAGTGCATCGCATTCGCCTGACCGACC
GTACCGCGTATGAGCCGAGCGCTCTCGCAATTGGTCCTTATCACCATGCAGATCCACCACTTCAAGCTATGGAAATGGAG
AAGTGGATATGTCTACACTACATTCTTGATTTGAATCGCGATGTTAGGTTGCGTGACTACCTGAGCTTGATTTCTGGACT
AGAGAAAGAAGCAAGATGCTATTACACCGAGGAGATAAGCATGGATAGTAGAGAGTTCCTGCAGATGCTTCTGCTAGATA
GCTGCTTTATTCTGGTGTACCTTGGTCGTATCAATGCACAAGGAGCTTCTGTTGGTGGTGAACAATTGAAAGAAAACAGA
GCATACGAAAGAAAGAAGGAACCAACGGAGTTGAGCCAGATCAATACAGCCTGCTGCCCAAGTGTTAGTGGGCACTCAGC
GGTGGACATAGAACTAAATCAATTTGTTAAAGATCCTGAGGGTAGCCCTGACCAGGGGATTTGCAGCGGTACTGTGGAAT
GGTATAACAGTTCTGCTGTCTATGATCTACTTTTGCTGGAGAACCAAATTCCCTTCTTCATTGTCAAGACAATTTATCTG
TTCTTCTCATGCAATGTAACAACTACTTCGTTACTTACCGACAGCATTTCAGAATTCATGGAAGGCATTCTTTACCACTT
CCCTAAAGTACTAACTGAGGCAAATAGGCCAAAAGATTTCTACCATCTGCTTCACCTGTGTCATAAGTACCTGAAACCTA
GTCACAATCTGGAGGATGACCATCATAGATATGCTGCAAATTTTCACTGCTTGCACTTCATATTTGACATCAGCCGGAAG
ATCTTCACTTTTGGACGGGTGCAAGGAATGTCCCATGACCAAAACATGTTCCATGAGCTAGATTGGTCGAATTCAGTACA
GAAATTTAATCGGTGGCGTAGAGCAGTGGACTATCATGAAGCAGGAATGCAGTTCAAAAAGCGGGAGTTTGACGAAGCCA
AACCTCATTCCCTGTTGGACATTAGATTCAGAAACGGTCTCATGGAAATACCATGCTTGCCAATAGATGACAAGTCTTCT
TTGCTTTTCAGAAACCTTGTAGCTTTTGAGCAAACCTGTCCTCAAGTTGGGGATGATATCACTGCATATGTTGTGCTTCT
GTCCCAGCTTACTAGTACGGCAGCTGATGTTACTCTTCTTTCTCAGAAAGGGATTATAGTGCACCAGATGGAAAGTGACG
AGGATGTATCGACTCTTTTCACAAAGCTTTTTGAGTATGTAGTATTTAACTTCAATGGTGAACACTACCTAAAGTCCCTA
TGTTATGCCATGGAAGCACACTACCAAAGTCGTATTAATAGGTGGATGGCATGGCTGTGGCACAATCACTTCAGCAATCC
CTGGGTAGGTTTTGCCGCGATAGCTTCTGCTTTTATAGTTGTATGCAGCATTATGCAAACTGTTCTTGCTTTCTTGTCAT
ACATGGAATGAAG-------------------------------------------------------------------
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------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS--------------------------------------------------------S-----------------SS
SSSSSS---------S--S-------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------S-SS------------S-SS----------SSS----S-SSS-S-SS-
SSSSSSS--------S--------S----S-S---S-----S---S-------S---S----------S-----------
----------------S---S-----S---S------S---S-SSS-SS---S--S-S-S--SSSS-SSSSS---SSSSS
SSSSS----------SSSSSSS-S-------------SS--S--------SSS----S------S--S-SSSSSSSSSS-
S----S-S----S---S-S--S-S--S-------SSS-S-S-SSS-SSSS---S---S-----------SSSSSSSS---
-S---S---S---SS-S-S-----SS-S-------S---S-SS---SS----SSSS------------------------
--------------------------------------------------------------------------------
------------------------------------SS--S------------------S----S-SS-S---SSS-S--
----SS--S------S-SSSSSSSSSSS------------S-------SS-S--------S-SS-S--S---S-SS--SS
----S-S-SSSSS--SS-SSS-SSSSSS-SS---------SS--S--SS---S------SS---S-S--S-S----SSSS
S----S--SSSSS----SSSSS--SS---SSSS-SSSSSS-SSSS-SSSSSSSS------------------------S-
--------S--SS-S--S--------S---------SSSSSS-S-SS-S-SSSSS-SSSSSSSS-S--------------
---------------------------------------SSS--S-S-S------SSSS-SSS-SS-SS--SSS-SSSSS
S-SSS-SSSSS--S---S-------S----S-S-SSSSSSSSSS------S-S-S---SSS----S--SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S---S--S------SS-------S---S--
---------------SS-S---S----SS-SS---------S-----SS-SSSS--SSSS----------S--S------
--S------------------------S-----S----------S--S------------------S-S------SS---
---------S----------S------------------------------S-----S-----S-----S----------
S--S------------------------------S-----------------S--S-------S---S------------
--------------S--S---S-------------------------S-----------------------S-----S--
------S----------S---------S--------------------------S---S--------------S------
--------S----------------SS-SS-SS-S-------S-------S-SS----------S-----S-----SS--
---S-------S---------------------------------S---SS------S-----------------S----
---S------------------S---S-S----S---S---------S--------------------------------
----------------------------------------------------------S----------S------S-S-
S----------------------S-----SS-SS----------------------------------------------
---S---------S----------------------------S--------S--------------------------S-
-------------S-----------S--------------S--------------------SS--------S-S----S-
--S----------------S-S--SSS-S-SS-S------S------------------------------------S--
S-------S--------S------------------------------------S----------------SS-----S-
--S-----SSS--------------------S--------------S--S------------------------------
--------------------------------------------------------------------------------
---------------------S-----------------S---------------------------S------------
-------------------------S-----------------------S--------S---------------------
--------------------------------------S-----------S-----------S-----------S-----
------------------------------------------------------------------------------S-
----SS-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_911
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------TTTTGTTCTGTGCCGCTTCG-------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2164
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---ATGCGTATGAGCCGAGTGTT---------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>forward_1317
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------AAGTCCCTACCAGCTAGCCA-------------------------------------------
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>reverse_2288
--------------------------------------------------------------------------------
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-----------------------------------------------CTTGCGTGAGTACCTGAGCT-------------
--------------------------------------------------------------------------------
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------------------------
>forward_1318
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------AGTCCCTACCAGCTAGCCAA------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3348
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-------------------------------------------------------------------TTGGAAAGCGACG
AGGATGT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>forward_2530
--------------------------------------------------------------------------------
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------------------------------TTGAGCCACATGGATGCAGT------------------------------
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>reverse_4061
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------------------------------------------------------------GCTGCCTGATTCCTCACTGT
--------------------------------------------------------------------------------
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------------------------
>forward_3748
--------------------------------------------------------------------------------
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------------------------------------------------GTGAGCTTGCATAGTGCTGC------------
--------------------------------------------------------------------------------
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------------------------
>reverse_4914
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---------------------------------AAGTCTCTCTTCCTTGGCGC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
