>input_sequence_25449
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---------------------------------------------------------------ATGCCCAAGGCAGGAGA
CTGTAGCGGCGGCGG---CGGCGGTGGCCGGAGGGACCTGCCTCTGCTTTTCCTGAGGGTGGGCGCTGCCATCACGCTCT
CCATCGCTGGGCTCTTCTTCTCGCGGCTGCGGTGGCAGCACCGGCCTCGGCCCCGGCACCTCCTGCTCCCTCCTCCTTCA
GGTACCATACCATGAGCACATGCATGTCTTGCTTGCAAGCTAGATATGCTTTCT--------------------AGATTG
ATTATGCCTCAGTTATGTCTTGTGCACTGCAAGATTGAGAATTTTCTTGTCTATCGAGCAATCAACAACAGCTCTGCCTC
TTCATTTAGTACTGTAGAATTTTTTGACCACTTATAATAAGAAAAACAGGATAAGAAGTGATGCATATTGAAATATTTTT
GGTATGGTTTGATGTGTTCGTAGAGCCGGATGATGCCCGTGGCATGAAGGGTGGTGGTGGAGGGCTCAAGGACGAGCTAA
GGATCCTCAAGAATGTAAGAATCTGATTGTACATAAACATGATTGCTGTAATTTTTGCACTTGTAGAGTTGTAACCATAC
CTAAGAAGGATGAGCTAATAGGTTAACAGAGAACGGTCATGCTGAGTATTTATAAATTATTATGATCAGAAGGTGATACT
TAGAATTCTTAGATGTTTTAGTTATTAATTGGTAGTCTTTTAACCTTTTTCAGGGAATATAATTCTTTTTCTAGATTGTT
AGTACATACTATTAAACGTTGCAAAAAAAGTCTGAATGGTAAGCATTAGGCAAGGCAAACCATGGGCTCGTTGGAAGATG
GTAAAAACATAGTGTGATGCTTTCGGGGTTACGCTACACATTCTTTTTAATATCCCTTTCCTTAATGTGTTATATCAAAT
TCGCCGTAACACGTGAATCTTAAACTGTATTTAAAGGATGACCTTTTGTTTACTATGAACATATTGCTGGTAGTTCATCT
TCCACGACCGTCGTAACAAAATAG--------------------------------------------------------
----------------------------AACTTATCCACAAATTAGTTATTGCCTGTATTCGATATCATTCTTCAATCCG
TTGAAGGAAAATTGAAATATGCCCATTTTCATTTGTAGTCTTTCATTTATATTTGTGCTTTGTGCAGGAGGATACCAAGG
CAAAAATAATCAATGGTAACTCTGTGCACACAACCACTACCACTACAACGACCACCACCACTGCCTCAGTGTCACTTCCT
CCGAAATGCCGAAACATTGATGATGATGATGATGATGATGATGAAGGATTTCTCCTTCCAGAATACAATGAAATGGTTAT
GGAAGAATTTGGCGGAGACGTAGGCAATATCGCAAGCTCACCTGCAGCAAGAGTAAGGGAAGATGCATCTAATGAGCATG
AAATTTTCAAGCTCAGAGATTTGGTTAGATCTCTGCAAGAAAGGGAAAAGACCCTGGAGATACAACTTTTGGAGTTGTAT
GGTTTGCAGGAGCAAGGTGCTGCAGTTAGGGAGCTTGAGAACCAACTGAAGATAAACAATGTCGAGTCACAGCTATACTC
CTTGAAGATCGAATCCTTGCAATCTGAAAATCAGAGGTTACAAACACAGTTGTCTGAAAGCTCAAAGTTAACTTCCCAGC
TTGAGTTGACAAAATCAAAATGCAAGCTGTTGAAAAAGAAGTTGAGACTGGATGCGGAACAAGCAAAGGAGAAAATCACT
TCCCTTCAGAACATAGTTGATTCCTTTCAGTGTAAGGAGATTATTGAGGGAGAAGTTGACGGCGAGGCTGAGAAGAAATT
AAAGAGGCTAGAGGAATTGGAAAATGAGGCAAGAGAGCTTAGAGCTGCAAATTCAAGGCTGCAGCAGGAGAATTCACACC
TTACTAGGCGATTGGAGCTCACACGCCTACCGCCTGTACCCAAGTCCCACAATAGCATGGAGGTAAATCTTGACTGTTCT
TGGCCTGCACTGTAACTAACACTTAATGTGCAAAAATGAATCGTCAAATGGAGGAGGTATTCCTAAACAGAAAATGATAT
TCTTGATGCTTGTTCTGCCAAACAGAAACTGCGTAA-TTTTTTTCCACAGATCTATTGCTTCGGTGTGTGCTAATTTGAA
GTGCATTGTGTTATTGATCATTTGTTGCTCTGTCACGAATTAAGCAAGTAAAAATGATTGCAGGTAAAAACATCAGAACA
AGTTGATGGGTTGAAGCAAGAAAACGAGAAGTTGTCAAAAGAGGTTGAACAACTGCGGACTGACAGGTTTGCAGATGTTG
AGGAGCTGGTATATCTTAAATGGATCAATGCTTGCCTGCGGCATGAGCTGAAGAACAAGGGGACTCCTGGTCCTGGGGCA
CAAACTACAGCACAGGATCTAAGCAACACCCTAAGCCCCAAATCTGAACAGACAGCCAAGCAATTGATAATGGAGTATGC
CAATGTTGGTGCGGACGAGAGAAGTTTAAGCTCCATAGAATTTGGCTCAGAGTACGCTTCTTCAAGGGCATCATCAAGTG
GCGAACCCGATGACACATCGATCGATATGTCATCAGTCACAACGCCCAGAAACCCGAAGAAGAAAGAGAAGAAGAAGTTT
TTCTCTAAGCTACGGAAATTGGTACTGGGAAAAGATAAGGAAAAGAACAATTTCCCTACTTTGGAGAGGAGAGTGTCTAT
TTCGAGCTGTTCCTTTGATGACTTCACTGGAAGAGACTCGCATGATAGCTACTCTTCCTTCTTGACAGAAGGAGCCGTAT
CTGCCAATCAGCAGCATGACGATCGCAGCTGCGTTACGCCTTCTTTTGGCAGCCAAAGATATAGCACAG---AAGCAGGA
GATGGAAGATACCAGCGTCATGGGGTAAAAAAGAATGCATCTTTCGGATCCGGAAGATTCAGTGAACATGGTTCTCAGTT
TGATAGTGGTGAGGCCACAATACCAGAAGATGTTGAGATCCACAAATTCGCCGAGGCACTGATTACATCAAGGACAGGTT
CTATGTCATCCAGAAGGACATTATCCTTCAGCTAA---------------------------------------------
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>chr1A_1_TraesCS1A01G122200
GTGTGTGGATCCGTGAAAGTTTGTAATTAACTCATTTGATGAGCCGTCACGTTGGAGATGTTGTACAACCACGGGGGGTC
GTCGTGTTCCTCGTGTGAACCAACCGTTCCAACAAACAACAGAGCATGCCTTGCTGGCAGCAGCAGGAGCTCCTTCAAGG
TGGCGTGAAGAAATCACGGAAGATCCGTAAGAGACCACCACACGCTCCACGCTTCCTTCCGCCATCAATCGGTTCAGCCA
CCCT-CCGCCAACGGCCGCTCTCCCA-----ATTTACAATTAGTGCACAAGCAAGCTGAGACTGAAATTTCGCCACGGAA
GTAGTACTAGC---------GAAGAATTGGCGAATTTGCGATCTGTGAAAGAACCGGCGAGAAAACGACGGAATCCGAAT
AAATAAAGAAAGGCGACACGAGTGCCCCGCTACAAAGACGGGGACATGTTCCGGCATTTGGAATCGGAATTTGTCTTGCC
TTGGGAGGAACAAGAACAAGCCAAGACAGAAACGGAACAAACGAGCCGTGCCACTT-TGAGAGGAAGCTAATTTTGTTGG
CTTCTTCTTC------CTCAGTCGTTACGCTTTCTTGGCGGTTTCCGTTGGCTGCGAGCTAAAGCCGGAGCCTGCCACCC
TAATTTTAGCCCCTCCTTGTCCAAATTGGAGGTTACCGGAGGGCGAATCGTAGCCCGGTTCGGCTGTTCGGCTGGGTTTG
GCTACGCCCCTCCTCCTGGTCTGCTCGATTCAGGCCATGGAGATATGGCTGGCAAAGGTGCAGGGGGGTGGAGCTCGCCG
TGTTTCTTGATGCGATTTGTGCAAGTATCAGCCCCTCCTCGCATCAATCTTGGGGTCTAGAGCCCGAAATCTTAACTTCT
AGTCACCAACATTAGAAATTTGTTTGCCACCTTCTTGGCGATCCTAAGACACTTGAGCCGCTGATTGGGTTCCCCTTGTG
TCTGCCGTTCTCATGCGGCAGGATTCAGATGTTCTT-GGCAAGGTAGGTCAAGGTAAAGGGAGATGCCCAAGGCAGGAGA
CTGTAGCGGCGGCGG---CGGCGGTGGCCGGAGGGACCTGCCTCTGCTTTTCCTGAGGGTGGGCGCTGCCATCACGCTCT
CCATCGCTGGGCTCTTCTTCTCGCGGCTGCGGTGGCAGCACCGGCCTCGGCCCCGGCACCTCCTGCTCCCTCCTCCTTCA
GGTACCATACCATGAGCACATGCATGTCTTGCTTGCAAGCTAGATATGCTTTCT--------------------AGATTG
ATTATGCCTCAGTTATGTCTTGTGCACTGCAAGATTGAGAATTTTCTTGTCTATCGAGCAATCAACAACAGCTCTGCCTC
TTCATTTAGTACTGTAGAATTTTTTGACCACTTATAATAAGAAAAACAGGATAAGAAGTGATGCATATTGAAATATTTTT
GGTATGGTTTGATGTGTTCGTAGAGCCGGATGATGCCCGTGGCATGAAGGGTGGTGGTGGAGGGCTCAAGGACGAGCTAA
GGATCCTCAAGAATGTAAGAATCTGATTGTACATAAACATGATTGCTGTAATTTTTGCACTTGTAGAGTTGTAACCATAC
CTAAGAAGGATGAGCTAATAGGTTAACAGAGAACGGTCATGCTGAGTATTTATAAATTATTATGATCAGAAGGTGATACT
TAGAATTCTTAGATGTTTTAGTTATTAATTGGTAGTCTTTTAACCTTTTTCAGGGAATATAATTCTTTTTCTAGATTGTT
AGTACATACTATTAAACGTTGCAAAAAAAGTCTGAATGGTAAGCATTAGGCAAGGCAAACCATGGGCTCGTTGGAAGATG
GTAAAAACATAGTGTGATGCTTTCGGGGTTACGCTACACATTCTTTTTAATATCCCTTTCCTTAATGTGTTATATCAAAT
TCGCCGTAACACGTGAATCTTAAACTGTATTTAAAGGATGACCTTTTGTTTACTATGAACATATTGCTGGTAGTTCATCT
TCCACGACCGTCGTAACAAAATAG--------------------------------------------------------
----------------------------AACTTATCCACAAATTAGTTATTGCCTGTATTCGATATCATTCTTCAATCCG
TTGAAGGAAAATTGAAATATGCCCATTTTCATTTGTAGTCTTTCATTTATATTTGTGCTTTGTGCAGGAGGATACCAAGG
CAAAAATAATCAATGGTAACTCTGTGCACACAACCACTACCACTACAACGACCACCACCACTGCCTCAGTGTCACTTCCT
CCGAAATGCCGAAACATTGATGATGATGATGATGATGATGATGAAGGATTTCTCCTTCCAGAATACAATGAAATGGTTAT
GGAAGAATTTGGCGGAGACGTAGGCAATATCGCAAGCTCACCTGCAGCAAGAGTAAGGGAAGATGCATCTAATGAGCATG
AAATTTTCAAGCTCAGAGATTTGGTTAGATCTCTGCAAGAAAGGGAAAAGACCCTGGAGATACAACTTTTGGAGTTGTAT
GGTTTGCAGGAGCAAGGTGCTGCAGTTAGGGAGCTTGAGAACCAACTGAAGATAAACAATGTCGAGTCACAGCTATACTC
CTTGAAGATCGAATCCTTGCAATCTGAAAATCAGAGGTTACAAACACAGTTGTCTGAAAGCTCAAAGTTAACTTCCCAGC
TTGAGTTGACAAAATCAAAATGCAAGCTGTTGAAAAAGAAGTTGAGACTGGATGCGGAACAAGCAAAGGAGAAAATCACT
TCCCTTCAGAACATAGTTGATTCCTTTCAGTGTAAGGAGATTATTGAGGGAGAAGTTGACGGCGAGGCTGAGAAGAAATT
AAAGAGGCTAGAGGAATTGGAAAATGAGGCAAGAGAGCTTAGAGCTGCAAATTCAAGGCTGCAGCAGGAGAATTCACACC
TTACTAGGCGATTGGAGCTCACACGCCTACCGCCTGTACCCAAGTCCCACAATAGCATGGAGGTAAATCTTGACTGTTCT
TGGCCTGCACTGTAACTAACACTTAATGTGCAAAAATGAATCGTCAAATGGAGGAGGTATTCCTAAACAGAAAATGATAT
TCTTGATGCTTGTTCTGCCAAACAGAAACTGCGTAA-TTTTTTTCCACAGATCTATTGCTTCGGTGTGTGCTAATTTGAA
GTGCATTGTGTTATTGATCATTTGTTGCTCTGTCACGAATTAAGCAAGTAAAAATGATTGCAGGTAAAAACATCAGAACA
AGTTGATGGGTTGAAGCAAGAAAACGAGAAGTTGTCAAAAGAGGTTGAACAACTGCGGACTGACAGGTTTGCAGATGTTG
AGGAGCTGGTATATCTTAAATGGATCAATGCTTGCCTGCGGCATGAGCTGAAGAACAAGGGGACTCCTGGTCCTGGGGCA
CAAACTACAGCACAGGATCTAAGCAACACCCTAAGCCCCAAATCTGAACAGACAGCCAAGCAATTGATAATGGAGTATGC
CAATGTTGGTGCGGACGAGAGAAGTTTAAGCTCCATAGAATTTGGCTCAGAGTACGCTTCTTCAAGGGCATCATCAAGTG
GCGAACCCGATGACACATCGATCGATATGTCATCAGTCACAACGCCCAGAAACCCGAAGAAGAAAGAGAAGAAGAAGTTT
TTCTCTAAGCTACGGAAATTGGTACTGGGAAAAGATAAGGAAAAGAACAATTTCCCTACTTTGGAGAGGAGAGTGTCTAT
TTCGAGCTGTTCCTTTGATGACTTCACTGGAAGAGACTCGCATGATAGCTACTCTTCCTTCTTGACAGAAGGAGCCGTAT
CTGCCAATCAGCAGCATGACGATCGCAGCTGCGTTACGCCTTCTTTTGGCAGCCAAAGATATAGCACAG---AAGCAGGA
GATGGAAGATACCAGCGTCATGGGGTAAAAAAGAATGCATCTTTCGGATCCGGAAGATTCAGTGAACATGGTTCTCAGTT
TGATAGTGGTGAGGCCACAATACCAGAAGATGTTGAGATCCACAAATTCGCCGAGGCACTGATTACATCAAGGACAGGTT
CTATGTCATCCAGAAGGACATTATCCTTCAGCTAACTGATAAAAAACCAGTAGC-TAGGAGTCATGTGATGCTGACCATC
TTGTCTG----GATGTATATTTTTGCCAGACCCTGATGGTGAAGTGATAGGAGATGTTACTGGAATGAAGTATCCAAGAC
TTCATTCTGTGTGAAATGTACAATCATGTATAATAGTATAGTGCAATGACCTTTAATCTCAATCTTTGCCGTTCATTTGG
CTGGTTTGTGCTTCTTCACTGTCG-------------TTATTTGCAAAGCATTTTTGATAAAATGGCATTTTTATTAACT
CAAAATAAATAATAGCATC-------------------------------------------------------------
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------------------------------------------------------------------------------AA
GTGGATACAAAACATGTTGAGCAACACCCGGCATGTGTATAACTAAGACGCACACAGTCAAAGACCAACAGTCTGACAAA
AGATAATAAAAAAAACCAACATATGTAGAGTCATA--GGATTGGCGCTATG-----------------------------
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---------------------------------------------------------GAGGATTTTAACTTATAGTGGAA
TATTTGGCTTCACATTTTTTTTTGTTATTATCCAATGGGACCTCTGAATACATGAGCGCTCCATTATTTTGCAAACTACT
TTTGTTTTTCACGAAAATGGTCGCAGGTAACCGACAAACATATAGATTAATTGTTGTTATGTTTTTTAGGGTAATTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGGTAGATAATGGTAAACTGCTCCAAGCACATCATAAATCAACTTTGTTAGTCCC
AATAAAGTTAGACCTCACATGGAAGCCTCTCCCTCTTCTTCCTTCTTTCCTCAAATCCCCTCCTTTATCACGACCCATTC
CCACGTCGCTCCTGTGGCGGCTTGGGCGGAACCCTAGCCCGTGGCCACTAATCCCTCCATGTGCCTCCTCTCCCTTGCCG
TCGCTAGAGGATGTCGGTGGGCTAAGACCTCTCGGCGGACGGAGGCGGCGGGGAGCTTCCTCATGCACATGTCTGTTCCC
TTGGTCGGGGAGCCCCCCTCTAAACGTTGCTCATATCTGGCGACCGACAACTTCTCTCGAGAGGTCCGGCGACCCTCTGG
>chr1D_46
---------------------------------------------GTCACGTTGGAGATGTTGTACAACCACGGGGG-TC
GTCGTGTTCCTCGTGTGAACCAACCGTTCCAACAAACAATAGAGCATGCCTCGTTGGCAGCAGCACGAGCTCCTTCAAGG
TGGCGTGAAGAAATCACGGAAGATCCGTAAGAGACCACCA--CGCTCCACGTTTCCTTCCGCCATCAATCGGTTCAGCCA
CCCTCCCGCCAACGGCCGCCCTCCCATTTACATTTACAATTAGTGCACAAGCAAGCTGAGACTGAAATTTCGCCACGGAA
GTAGTACTAGCAGTACTAGCGAGGAATTGGCGAATTTGCGATCTGTGAAAGAACCGGCGAGAAAACGACGGAATCCGAAT
AAATAAAGAAAGGCGACACGAGTGCCCCGCTACAAAGACGGGGACATGTTCCGGCGTTTGGAATCGGAATTTGTCTTGCC
TTGGGAGGAACAAGAACAAGCCAAGACAGAAACGGAACAAACGAGCCGTGCCACTT-TGAGAGGAAGCTAATTTTGTTGG
CTTCTTCTTCTTCCTCCTCAGTCGTTTCGCTTTCTCGGCGGTTTCCGTTGGCTGCGAGCTAAAGCCGGAGCCTGCCACCC
TAATTTTAGCTCCTCCTTGTCCAAATTGGATGTTACCGGAGGGCGAATCGTAGCCCGGTTCGGCTGTTTGGCTGGGTTTG
GCTACACCCCTCCTCCTGGTCTGCTCGATTCAGGCCATGGAGATATGGCTGGCAAAGGTGCAGGGGGGTGGAGCTCGCCG
TGTTTCTTGATGCGGTTTCTGCAAGTTTCAGCCCCTCCTCGCATCAATCTT--GGTCTAGAGCCCGAAATTTTAAGTTCT
AGTCACCAAAATTAGAAATTTGTTTGCCACCTTCTTGGCGATCCTAGGACACTTGAGCCACTGATTGGGTTCCCCTTGTT
TCTGCCGTTCGCATGCGGCAGGATTCAGATGTTCTT-GGCAAGGTAGGTCAAGGGAAAGGGAGATGCCCAAGGCAGGAGA
CTGTAGCGGCGGCGGCGGCGGCGGTGGCCGGAGGGACCTGCCTCTGCTTTTCCTCAGGGTGGGCGCTGCCATCACGCTCT
CCATCGCTGGGCTCTTCTTCTCGCGGCTGCGGTGGCAGCACCGGCCTCGGCCCCGGCACCTCCTGCTCCCTCCTCCTTCA
GGTACCAAACCATGAGCACATGCATGTCTTGCTTGCAAGCTAGATATGCTTTCTTTATAAAATCTTTCCTTCCAAGATTG
ATTATGCCTCAGTTATGTCTTGTGCACTGCAAGATTGAGAATTTTCTTGTCTATTGAGCAATCAACGACAGCTCTGCCTC
TTCATTTAGTACAGTAGAATTTTTTGACCACT--TAATAAGAAAAACAGGCTAAGAAGTGATGCATATTGAAAT-TTTTT
GGTATGTTTTGATGTGTTCGTAGAGCCGGATGATGCCCGTGGCATGAAGGGTGGTGGTGGAGGGCTCAAGGATGAGCTAA
GGATCCTCAAGAATGTAAGAATCTGATTGCACAAAAACATGATTGCTGTAATTTTTGCACTTGTAGAGTTGTAACCATAC
CTAAGAAGGATGAGCTAATAGGTTAACAGAGAATGGTCATCCTGAGTATTTATAAATTATTATGATCAGAAGGTGATACT
TAGAATTCTTAGATGTTTTAGTTATTGATTGGTAGTCTTTCAACCTTTTTCAGGGAATATAATTCTTTTTCTAGATTGTT
AGTATATA--AACGTCA----CAAAAAAAGTCTGAATGGTAAGCATTAGGCAAGGCAAACCCCGGGCTCGTTGGAAGATG
GTAAAAACATAGTGTGATGCTTTCAGGATTAGGCTACACATTCTTTTTAATATCCCTTTCCTTAATGTGTTATATCAAAT
TCGCCGTAACACGTGAATCTTAAACTGTATTTAAAGGATGACCTTTTGTTTACTATGAACATGTTGCTGTTAGTTCATCT
TCCACGACCGTCGTAACAAAATAG--------------------------------------------------------
----------------------------AACTTATCCACAAATTAGTTATTGCCTGTATTTGATATCATTCTTCAATCAG
TTGAAGGAAAACTGAAATATGCCCATTTTCATTTGTAGACTTTCATTTATGTTTGTGCTTTGTGCAGGAGGACACCAAGG
CAAAAATAATCAATGGGAACTCTGTGCACACAACCACTACCACTACAACAACCACCACCACTGCCTCGGTGTCACTTCCC
CCAAAATGCCGAAACATTGATGATGATGATGATGATGA------AGGATTTCTCCTTCCAGAATTCAATGAAATGGTTAT
GGAAGAATTTGGCGGAGACGTAGGCAATATCGCAAGCTCACCTGCAGCAAGAGTAAGGGAAGATGCATCTAATGAGCATG
AAGTTTTCAAGCTCAGAGATTTGGTTAGATCTCTGCAAGAAAGGGAAAAGACCCTGGAGATACAACTTTTGGAGTTGTAT
GGTTTGCAGGAGCAAGGTGCTGCAGTTAGGGAGCTTGAGAACCAACTGAAGATAAACAATGTCGAGTCACAGCTATACTC
CTTGAAGATCGAATCCTTGCAATCTGAAAATCAGAGGTTACAAACACAGTTGTCTGAAACCTCAAAGTTAACTTCCCAGC
TTGAGTTGACAAAATCAAAATGCAAGCTGTTGAAAAAGAAGTTGAGACAGGATGCGGAACAAGCAAAGGAGAAAATCACT
TCCCTTCAGAACATAGTTGATTCCTTTCAGTGTAAGGAGATTATTGAGGGAGAAGTTGACGGTGAGGTTGAGAAGAAATT
AAAGAGGCTAGAGGAATTGGAAAATGAGGCAAGAGAGCTTAGAGCTGCAAATTCAAGGCTGCAGCAGGAGAATTCACACC
TTAGTAGGCGATTGGAGCTCACACGCCTACCGCCTGTACCCAAGTCCCACAATAGCATGGAGGTAAATCTTGACTGTTCT
TGGCCTGCACTGTAACTAACACTTAATGTGCAAAAATGAATCGTCAAATGGAGGAGGTATTCCTAAATAGAAAATGATAT
TCTTGATGCTTGTTCTGCCAAACAGAAACTGCATAA-TTTTTTTCCACAGATCTATTGCTTCGGTGTGTGCTAATTTGAA
GTGCATTGTGTTATTGATCATTTGTTGCTCTGTCACGAAATAAGAAAGTAAAAATGATTGCAGGTAAAAACATCAGAACA
AGCTGATGGGTTGAAGCAAGAAAACGAGAAGTTATCAAAAGAGGTTGAACAACTGCGGACTGACAGGTTTGCAGATGTTG
AGGAGCTGGTATATCTTAAATGGATCAATGCTTGCCTGCGGCATGAGCTGAAGAACAAGGGGACTCCTGGTCCTGGGGCA
CAAACTACAGCACAGGATCTAAGCAACACTCTAAGCCCCAAATCTGGACAGACAGCCAAGCAATTGATAATGGAGTATGC
CAATGTTGGTGCGGACGAGAGAAGTTTAAGCTCCATAGAATTTGGTTCAGAGTACGCTTCTTCAAGGGCATCATCAAGTG
GCGAACCCGATGACACATCGATCGATATGTCATCAATCACAACGCCCAGAAACCCGAAGAAGAAAGAGAAGAAGAAGTTT
TTCTCTAAGCTACGGAAATTGGTACTGGGAAAAGACAAGGAAAAGAACAATTTCCCTACTTTGGAGAGGAGAGTGTCTAT
TTCGAGCTGTTCCTTTGATGACTTCACTGGAAGAGACTCGCATGATAGCTACTCTTCCTTCTTGACAGAAGGAGCCGTAT
CTGCCAATCAGCAGCATGACGATCGCAGCTGCGTTACGCCTTCTTTTGGCAGCCAAAGATATAGCACAG---AAGCAGGA
GATGGAAGATACCAGCGTCATGGGGTAAAAAAGAATGCATCTTTCGGATCCGGAAGATTCAGTGAACATGGTTCTCAGTT
TGATAGTGGTGAGGCCACAATACCAGAAGATGTCGAGATCCACAAATTCGCCGAGGCACTGATTACATCAAGGACAGGTT
CTATGTCATCCAGAAGGACATTATCCTTCAGCTAACTGATAAAA--CCCGTAGCTTAGGAGTCATGTGATGCTGACCATC
T-----GTCTGGATGTATATTGTTACCAGATCCTGATGGTGAAGTGATAGGAGATGTTACTGGAATGAAGTATCCAAGAC
TTCATTCTGTGTGAAATGTACAATCATCTATAATAGTATAGTGTATTGACCTTTAATCTCAATCTTTGACATTCAATTGG
CTGGTTTGTGCTTCTTCACTGTCG-------------TTATTTGCAAAGTATCTTCGATAAAAGGGCATTTTTATTAACT
CAAAGAAAATG-TAGCATCAAGCTCCCCTCCTCTCCTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGGCACCCAGATCCGCGGAGGTGCGGCCCCCACTTCGGCCCACGGCGGCGCGGCGTCCCAGCGGCGGCGGCT
ATGGTGGTGCCGGTGGGAATCGGCCGGATGCACAGGGGGCGGGGGTGGCCGGGGCGGCGACCCCATGGCTGGGTGGCGGC
GCGCCCGTTGGTCCGACTGGTTCCGGCTCGTCCCGGATCTGGTGACTACCGGACGGCGCGGGGGGTGGCTGTGGCCCGGT
GTGGCCAACGATCTGGACACGGTGGTGCCGGTGGCTCGCTGGTCTGCCGGAGATCCAGGAGTATCATCGTCTCCGACTCG
ATCTGCTCCGGTTCGTGCTAGCTCTGGTACAGGGAGACTGTCGTCATCTCCCGGTGCTAGCTGCATGGATCTGGCGGCGG
CTGGATCCGTTTGATCTAGTCTCCGACGGAGAAGGCGACGGTCCGTGCACAAGAAGCTGGATGGAGTTCTTCGAACAGAT
CTGGGTGAAAATCTGCTCTTGGCTAGATGGCAAAGCCGGCGATGGCATCACAGTGGAGAAGTTCTAGACTACTATCTGCT
ACCTTCGGGGGAAACCCTAGATCGATAGATCAGAAGACGGCGGCGCGATTGTGTCGTTTCCCCCTTGGGGGCGTCTTTCT
TGGAGGTGTACGCGGGCTCGAGGGACCAGTGGACGACGTCTTTGGTGAAGTGGTGCTTCATCATACACATGGATGGTGAC
AGATCTCGATGGCATGGCGCCCTGGAGATTAGGAGTCTGATGTGCGATGATGGACTCGCGCAGGAGGTCGACGCTGTCTG
CCGTCGTGGTGGCGTCGGCGGCAGCTAGACCGGGCAAGGTCGATCCAGTAGTACATCTCTGAAGATGGATTGGTGGCAAG
TGGCTGCGGCGGCCTCATACCCGGCAGGCGTCCTGGTTGAGGAGCACGCCGGACTGGTGGGTGCCCATACCCGGCAGGCG
TCCTGGTTGGGACCTCAGGTCTTAGATGTTAGGTTTGGCTGCGATGTCTGTTTGGTATTAGGCCCAGGCTATCAGCGCCC
CTTCATCAATTGGATAGGTGTAGCGACAGTTGTTGCTTAGACGATGGCTTTAATCTTACTGTTGTATGACTTTGTAAGGT
CTTGTGAGAATAATTAACAAAGTGGCCGCATGCATCGCCCAGATGCAGAGGTCGGGGGTCCTCCTCCTTTTCTAAAAAAA
CTGGATACAAAGCATGATGAGCAACACCCGACATCTATATAACTAAGACGCACACAGTCAAAGACCAACAATCTGACAAA
AGATAATTAAAAAAG---ACATATGTAGAGTCATATAGGACTGGCGCTATGCCTATGTCAAAGGAGGTGGCGAGCCGAT-
ATGGTCCATGTATGAAGCGA-GTGCGTACATCGGAAAATAACCTGCAGAGGAGAAGGGTTTTTGCCATTAAAATCCAAAT
CATTTTTATATAGCCAAAGCGTCCATCATAAGGCATACACTCTCACCCTTATTAGCTTTCAGAATCTATTTGGAATACCA
TCCAAATAGTGACAAAAAGTATTGGCAACACTTGTGAGCCGATAAAAATTGAATGCTATTTGCATGACTGGCCACGTAGA
ACGTGCAAATTTGCATCGAAAAAAGAGGTGTCTGATTGTCTCGTTATTAGTACAAAATCTACACTTTTTACTTGCTTGCC
AATTTCGACGGTGAGGTTGTCTTTGGTTAGTGTAACTCCTATCAGAAGATACCACGTGAAGATTTTAACTTTTAATGAAA
TATTTGGCTTCAG--TTTTTTTTGTTATTATCCAATGGGACCTCTGAATGCATGACCGCTCCATTATTTTGCAAACTACT
TTTGTTTTTCATGAAAATGGTCACAAGTAACTGACAAACATATAGATTAATTGTTGTTATTTTGTTC-------------
------------------------TTGGTAGATAATGGTAAACTGCTCCAAGCACATCATAAATCAACTTTGTTAGTCCC
AATAGAGTTAGACCTCACATGGAAGCCT----------------------------------------------------
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>chr1B_46
---------------------------------------------GTCACGTTGGAGATGTTGTACAACCACGGGGG-TC
GTCGTGTTCCTCGTGTGAACCAACCGTTCCAACAAACAACAGAGCATGCCTTGTTGGCAGCAGCACGAGCTCATTAAAGG
TGGCGTGAAGAAATCACGGAAGA---------GACCACCA--CGCTCCACGTTTCGTTCCGCCATCAGTCGGTTCAGCCA
CCCTCCCGCCAACGGCCGCTCTCCCATT-----TTACAATTACTGCACAAGCAAGCTGAGACTGAAATTTCGCCACGGAA
GTAGTACTAGCATTACTGGTGAAGAATTGGCGAATTTGCGATCTGCGAAAGAACCAGCGAGAAAACGACGGAATCTGAAT
AAATAAAGAAAGGCGACACGAGTGCCCCGCTACAAAGACGGGGACATGTTCCGGCGTTTGGAATCGGAATTTGTCTTGCC
TTGGGAGGAACAAGAACAAGCCAAGACAGAAACGGAATAAACGAGCCGTGCCACTTTTGAGAGGAAGCTAATTTTGTTGG
GTTCTTCTTC---CTCCTCAGTCGTTACGCTTTCTCGGCGGTTTCCGTTGGCTGCGAGCTAAAGCCGGAGCCTGCCACCC
TAATTTTAGCTCCTCCTTGTCCAAATTGGAGGTTACCGGAGGGCGAATCGTAGCCCGGTTCGGCTGTTCGGCTGGGTTTG
GCTACACCCCTCCTCCTGGTCTGCTCGATTCAGGCCATGGAGATATGGCTGGCAAAGGTGCAGGGGGGTGGAGCTCGCCG
TGTTTCTTGATGCGATTTCTGCAAGTTTCAGACCCTCCTCGCATCAATCTCGGGGTCTAGAGCCCGAAATTTTCAGTTCT
AGTCACCAAAATTAGAAATTTGTTTGCCACCTTCTTGGCGATCCTAGGACACTTGAGCCGCTGATTGGGTTCCCCTTGTT
TCTGCCGTTTGCATGCGGCAGGATTCAGATGTTCTTTGGCAAGGTAGGTCAAGTTAAAGGAAGATGCCCAAGGCAGGAGA
CTGTAGCGGCGGCGGCGGCGG---TGGCCGGAGGGACCTGCCTCTGCTTTTCCTCAGGGTGGGCGCTGCCATCACGCTCT
CCATCGCTGGGCTCTTCTTCTCGCGGCTGCGGTGGCAGCGCCGGCCTCGGCCCCGGCACCTCCTGCTCCCTCCTCCTTCA
GGTACCCAACCATGAGCACATGCATGCCTTGCTTGCAAGCTAGATATGCTTTCTTTATAAAATCTTCCTTTCTAAGATTG
ATTATGCCTCAGTTATGTCTTGTGCACCGCAAGATTGAGAATTTTCTTGTCTATCGAGCAATCAACAACAGCTCTGCCTC
TTCATTTAGTACAGTAGTTTTTTTTTACCACTA--AATAAGAAAAACAGGCTAAAAAGTGATGCATATTGAAAAAAAATT
GGTATGTTTTGATGTGTTTGTAGAGCCAGATGATGCCCGTGGCATGAAGGGTGGTGGTGGAGGGCTCAAGGATGAGCTAA
GGATCCTCAAGAATGTAAGAATCTGATTGCACAAAAACATGATTGCTGTAATTTTTGCACTCGTAGAGGTGTAACCATAC
CTAAGAAGGATGAGCTAATAGGTTAACAGAGAATGGTCATCCTGAGTATTTATAAATTATTATGATCAGAAGGTGATACT
TAGAATTCTTGGATGTTTTAGTTATTGATTGGTAGTCTTTCAACCTTTTTCAGGGAATATAATTCTTTTTCTAGATTGTT
AGTACATATAAACGTCA----CAAAAAAAGTCTGAATGGTAAGCATTAGGCAAGGCAAACCACGGGCTCGTTGGAAGATG
GTAAAAACATAGTGTGATGCTTTCGGGGTTAGGCTACACATTCTTTTTAATATCCCTTTCCTTAATGTTTTATATCAAAT
TCGCCGTAACACGTGAATCTTAAACTGTATTTAAAGGATGACCTTTTGTTTACTATGAACATGTTGCTGGTAGTTCATCT
TCCACGACCGTCCTAACAAAATACTCACTCTGTCCCATAATATAAGAGCGTTTTTTACACTACACTAGTGTAAAAAACGC
TCTTATATTATGGGACGGAGGGAGTAGTAACTTATCCACAAATTAGTTATTGCCTTTACTCGATATCATTCTTCAATCAG
TTGAAGGAAAACTGAAATATGCCCATTTTCATTTGTAGACTTTCATTTATGTTTGTGCTTTGTGCAGGAGGACACCAAGG
CGAAAATAATCAGTGGGAACTCTGTGCACACAACCACTACCACTACAACGACCACCACCACTGCCTCGATGTCACTTCCC
CCGAAATGCCGAAACATTGATGATGATGATGATGATGA------AGGATTTCTCCTTCCAGAATTCAATGAAATGGTTAT
GGAAGAATTTGGCAGAGACATAGGCAATATCGCAAGCTCACCTGCAGCGAGAGTAAGGGAAGATGCATCTAATGAGCATG
AAATTTTCAAGCTCAGAGATTTGGTTAGATCTCTGCAAGAAAGGGAAAAGACCCTGGAGATACAACTTTTGGAGTTGTAT
GGTTTGCAGGAGCAAGGTGCTGCAGTTAGGGAGCTTGAGAACCAACTGAAGATAAGCAATGTCGAGTCACAGCTATACTC
CTTGAAGATCGAATCCTTGCAATCTGAAAATCAGAGGTTACAAACACAGTTGTCTGAAAGCTCAAAGTTAACTTCGCAGC
TTGAGATGACAAAATCAAAATGCAAGCTGTTGAAAAAGAAGTTGAGACTGGATGCGGAACAAGCAAAGGAGAAAATCACT
TCCCTTCAGAACATAGTTGATTCTTTTCAGTGCAAGGAGATTATTGAGGGAGAAGTTGATGGTGAGGCTGAGAAGAAATT
AAAGAGGCTAGAGGAATTGGAAAATGAGGCAAGAGAGCTTAGAGCTGCAAATTCAAGGCTGCAGCAGGAGAATTCACACC
TTAGTAGGCGATTGGAGCTCACACGCCTACCGCCTGTACCCAAGTCCCACAATAGCATGGAGGTAAATCTTGACTGTTCT
TGGGCTGCACTGTAACTAACACTTGATGTGAAAAAATGAATCGTCAAATGGAGGAGGTATTCCTAAATAGAAAATGATAT
TCTTGATGCTTGTTCTGCCAAACAGAAACTGCATAATTTTTTTTCCACAGATCTATTGCTTCGGTGTGT-----------
-----------TATTGATCATTTGTTGCTCTGTCACGAATTAAGCAAGTAAAAATAATTGCAGGTAAAAACATCAGAACA
AGTTGATGGGTTGAAGCAAGAAAACGAGAAGTTGTCAAAAGAGGTTGAACAACTGCGGACTGACAGGTTTGCAGATGTTG
AGGAGCTGGTATATCTTAAATGGATCAATGCTTGCCTGCGGCATGAGCTGAAGAACAAGGGGACTCCTGGTCCTGGGGCA
CAAACTACAGCACAGGATCTAAGCAACACCCTAAGCCCCAAATCTGAACAGACAGCCAAGCAATTGATAATGGAGTATGC
CAATGTTGGTGCGGACGAGAGAAGTTTAAGCTCCATAGAATTTGGCTCAGAGTACGCTTCTTCAAGGGCATCATCAAGTG
GCGAACCCGATGACACATCGACCGACATGTCATCAATCACAACGCCCAGAAACCCGAAGAAGAAAGAGAAGAAGAAGTTT
TTCTCTAAGCTACGGAAATTGGTACTGGGAAAAGATAAGGAAAAGAACAATTTCCCTACTTTGGAGAGGAGAGTGTCTAT
TTCGAGCTGTTCCTTTGATGACTTCACTGGAAGAGAGTCGCATGATAGCTATTCTTCCTTCTTGACAGAAGGAGCC----
-----AATCAGCAACATGACGATCGCAGCTGCGGTACGCCTTCTTTTGGCAGCCAAAGATATAGCACAGCTGAAGCAGGA
GATGGAAGATACCAGCGTCATGGGGTAAAACAGAATGCATCTTTCGGATCCGGAAGATTCAGTGAACATGGTTCTCAGTT
TGATAGCGGTGAGGCCACAATACCAGAAGACGTCGAGATCCACAAATTCGCCGAGGCACTGATTACATCAAGGACAGGTT
CTATGTCATCCAGAAGGACCTTATCCTTCAGCTAACTGATAAAA--CCAGTAGC-TAGGAGTCATGTGATGCTGACCATC
T-----G----GATGTATATTTTTGCCAGATCCTGATGGTGAAGTGATAGGAGATGTTACTGGAATGAAGTATCCAACAC
TTCATTA--TGTGAAATGTACAATCATGTATAATAGTATAGTGCAATAACCTTTAATCTCAATCTTTGCCATTCATTTGG
CTTGTTTGTGCTTCTTCACTGTCGGTTTTTTTTGTCGTTATTTGCAAAGTATTTTTGATAAAAGGGCATTTTTATTAATT
CAAAATAAATG-TAGCATC-------------------------------------------------------------
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------------------------------------------------------------------------------AA
GTGGATAGAAACCATGATGAGCAACAGCCGGCATCTGCATAATTAAGATGCAC----------ACCAACACTCTGACAAA
AGATAATAAAAAACG---ACATATGTAGAGTCATATAGGACTGACGCTATGCCTATGTCGAAGGAGGTGGCGGGCTGATC
ATGGACCACGCATGAAGCGAAGTGCGTACATCGAAAAATAACCTGCAGAGGAGAAGAGTTTTTGCCATTAAAATTCAAAT
CATTTTTATATAGCCAAAGCGACCATAATAAAGCATACACTCTCACCCTTATTGGCGTTCTGAATCTATTTGGAATACCA
TCCAAATAATGACAAAAATACTGA-CAACACTTGTGAGCGGATAAAAATTAAACAATATTAGCATGAA--------TAGA
ACGCGCAAATTTGCACCGGAAAAAGAGGTGTTTGATTGTCTCATTATGAGTACAAAATCTACACTTCTTACCTCTTTGCC
AATTTCGACGGTGAAGTTGTCTTTGGTTAGCGCAACTCCTATCAGAAGATATCAAATGAAGATTTTACCTTCTAGTGGAA
TATTTGGC-TCAG--ATTTTGTTGTTATTATCCAATGGGACCTTAGAATGCGTGAGTGCATCGTTATTTTGCAAACTACT
TTTGTTTTCCATGAAAAA--TCGCAGGTAACCGACAAACATATAGATTAATTGTTGTTATGTT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------------S--
-----------------------------------------------------S-----------S--------------
----------------------------------------SS---------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
----------S---------------------------------------------------------------------
-----S--------------------------------------------------------------------------
------------------S-------S-------------------------------------------S----S----
---------S------------------------------------S--------------------------------S
----------S---------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------SS----------------S-----------------------------
------S-----------------------------------------------------------------S-------
-----------------------------S---S----------------------------------------------
---------------------------------S------S---------------------------------------
--------------------------S-------------S---------------------------------------
--------SS-SSSSSSSSSS-----------------------------------------S-----------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
-----------S--------------------------S-----------S---------------------S-------
----------------S--------------------------------------------------S-----------S
--------------------------------------SSSSSS--------------------S---------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------S-----------------------------------------------
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-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------SS----------------------------------
-SSSSS------------------------S-------------------------------------------------
----------------------------------------------------------------------S---------
-------------------------------------------------S-------------S----------------
----------SS--------------------------------------------------------------------
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-----------S----S-----------------S-----------------------------------S---------
--------------SSSS----------------------S---------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------S-----------S--------
------------SSS----------------------------------S------------------------------
-----------S---------------------------------------------------S--SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS--------------------------------------------------------
----S-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_971
--------------------------------------------------------------------------------
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------------------------------------------------------------------------CCCTTGTG
TCTGCCGTTCT---------------------------------------------------------------------
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>reverse_2964
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---CTAGGCGATTGGAGCTCACA---------------------------------------------------------
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>forward_2863
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-------------------------------------------TTGAGGGAGAAGTTGACGGC-----------------
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>reverse_6946
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-----------------------------------------------------------------TATCACGACCCATTC
CCACG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
