>input_sequence_25424
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-------------------------------------------------------ATGCCGAGCGTGGGCGTGAAGATCT
ACAGCGTCTTCTTCAAGCTGCTGCTGCGCCACCGCCTGCAGTCGCTCGCCGCC---GC------CGCCGCGGCCGACGGG
GACGGCGACGCGGGCTCCTTCGGGGTCTCCTGCCGCGCCGACGAGGCCACGGCGCCGGCCAACCCGGCCTTCTCCGCGGC
CGACGGGGTCGCCTCCAAGGACCTCCACATCGACCCCAACTCGGCGCTCTCCGTCCGCATCTTCCTGCCCACGCCGCCGC
CGCACCACCCGCACCTCCTCCACCCGCGCCGCGCCAGCGACCCCGCCGCCGGCCAGGCGGGCGCGCCCTACCGGGGCTAC
CTCCCGCACGCCGTCTCCTCCCCGCGGGCCGCCGCCTCCGCGCGCCGCCGGCTGCCCATCGTCGTGCAGTTCCACGGCGG
CGGCTTCGTCACCGGGAGCAACTGCTCCGCCTCCAACGACGCCTTCTGCCGCAGGGTCGCCAAGTTCTGCGACGCCATCG
TCGTCGCCGTCGGCTACAGGCTCGCGCCCGAGAGCCGCTACCCCGCCGCCTTTGATGACGGGGTCAGGGTGCTCAGGTGG
ATCGCCAAGCAGGCCAATCTCGCCATGATGAGCAAGGTTGGGGGCGGGGTGGACACGTTCGGCGCCTCCACCGTCGAGCC
ATGGATCGCTGCGCATGGCGATCCGGCAAGGTATAATTTAATTCAGGTTCTATGATCTCTCG-TTTGTAATTGCACTATT
TGCTACTTTTCTACTTTACTAAATGGCCAAGGAACATAATACTGCAGTGTGAAGTTGCCCAAAAGCGGGCAAGTCAAGCG
ATAGGAATTTTTGTTTCATTTCTTCAATGGAAGTTCTTGTTTGTGATTCACCAGCATTGTTTCAAAAACTGCAAACGAGA
ATTGCGCTAGTTAAGTGAACATGTCAAAACGATGAAGATATAGTTCACTAGTCTATTCGATCTGTTATTGTTTCAAATAT
GGAGATGGTAATTTCCCTGTGAGATGCCATTCTGGCTAGCAGCAGGTTTAGAGAGAGCTCATGAGTATGTCATTTCCCTG
TGAGATGCCATTCTGACTAGCAGCAGGTTTAGAGAGAGCTCATGAGTATGCCATTTCCCCGTGGGTTGCCATTTCGGACT
AGCAGCAGGTTTAGAGAGAGCTCATGAGTATGTCATTTCCCTGTCGGTTGCCATTTCGGACTAGCAGCAGGTTTAGAGAG
AGCTCACGAGTATGTCATTTCCCCTTGGGTTGCCATTTCTGACTAGCAGCAGGTTTAGAGAGAGCTCATGAGTATGTCAT
TTCCCTGTCGGTTGCCATTTTGGACTAGCAGCAGGTTTAGAGAGAGCTCACGAGTATGTCATTTCCCCTTGGGTTGCCAT
TTCTGACTAACAGCAGGTTTAGAGAGAGCTCATGAGTATGTCATTTCCCTGCGAGTTGCCATTTCTGACTAGCAGTGGTT
TGGAGACCATGAGTACGACATTTCCCCTCGAGTTGCAATTTCTTACTGGAAGCAGGTTTAGAGCTCATGAGTATGTTGAC
CGGGGAAGATTCAATGTTTACAAGCTGACAGTTATACTCACTTATCATATGGTGTGCACTTTCTGTTATATCTTACCATT
TGCATGTACCTTAGCTTTTTGTGTGGACTCTGATTGGGTACACAGGCTCACAACATAGAAGCATCAAATATCCAAATATT
AGTTGATTTAGTTCACCAGGATTACATGCTCCTAATGATGTTGACATTTTGAAGATGTCAATGCAACTTTACAAGATTTG
CTTGACCGTTGGCATGTGGAAAGACCTTTTCTTTGTGAAATTTTCTAGGGCACATGTTTTCAACAAAGCTCTATATTTCG
GTAGGTACTATATGTTGAGTAAATAACTGCTAATGATGTCACCACAGTCCAATGACCTTGAACACTAGTGAAGGCATGCA
ATTTTCATATTACTGATTCTGGGATTCTTTATTGGTCACGTTTGTTTACCTAACTTATTAATGAAATTCAATTGCACTGA
ACTGTTGGATTGAATAGATCAGTTAAAACTTATGCTGGTCTGCTCCATTACCTATAATGAAGATTTTATTTTAACTACGA
TTTCAGTAGAACCTGGTGAAATTAGTACCTTTCTCATGCCTTTTTATTATGTCCGTGATCTCTTAAATGTGATGTATATA
TTGATGGACTGTCATCATCTCAAACCTTGGTTGCTTGGTGTATCACACCTACCTGAGTTTAGACCCCTCAACAGATTAAG
TGCCCACTTCAATTTAATTTGAAATAGAATAGCTGCATACGTGCTAACATCATTAAATGGTTCTTGCCTTCTACCTATAA
GAGACAAAAGAATATATCTAGTAATTTATTGTAAATCCTTTTGTTTTAACTGTTGTACATTTGTGTTGCTGGAGTTTGAC
CAGATCATCCGTCTTTTCCTTGG-AGCAGATGTGTCCTACTTGGTGTAAGCTGTGGTGCCAACATTGCTGATTTTGTCAC
TAGGAAAGCGGTGGAAGATGCAAAGCAATTTGACCCAGTCAAGGTCGTAGCACAGGTTCTGATGTATCCCTTCTTCACAG
GAAGTGTTCCAACACACTCGGAAATAAGGCTTGCGAACTCATACTTCTACGACAAATCCACATGCTTACTTGCCTGGAGA
CTACTTTTATCAGAGAAAGAGTTCAGCTTGGACCATCCTGCTGCCAACCCCCTGGCCCCTGGCAGAGGAGGCCCCCCATT
GAAATGCATGCCCCCAACCTTGACAATCGTTGCGGAACACGACTGTATGAGAGACAGAGCAATTGCTTACTCCGAGGAAC
TCCGCAAGGTAAATGTGGACGCGCCAGTCCTCGACTACAAAGATACCGTCCATGAGTTTGCAACACTCGATGTGTTCCTT
AAGACACCACAGGCCCAGGCCTGTGCCGAAGATATTGCCATATGGATGAAGAAATACATATCCCTGAGAGGGCACGAGTT
CTCGTATTAG----------------------------------------------------------------------
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>chr3A_1_TraesCS3A01G393000
GATGCGCCGGCGTGCAATCCGGCGTTGACCGTTGC--TGGACGAGGATTTTTATACGTACCTTCCAGAAAGCCATCTGGG
TCTGCTCCAACGGAATTGCACGCCGGATTGCTGGAACGGTTTCCTGTTCGCAACGGCCCAATTGCTGGAACACAACAGAG
GAGGAAAAAAC-GAAGGGGCAAGACCCAATTGCTGGAACAATTGTTTGACATAAAGAAGTGCTTGGGCGGGGACACGCAC
GCACCAGCTTGGGAGGCGCTTTCACGTGAACCGATGGAATCTGGGAGTAGTAGTAGACAGGCATCGTACCCTGCACCGTT
TAATGCACTCCACGTTATCGGAGTTAAAAAAAACCCTGCCGAATAATACCACCATAGCACTCGCTCCGCCA---GGCGAA
ATGTGAGAACTAG------------------------------------------ACTAGTACTAGTACCACCACCAGCA
CCACCTCGCAAGGAGGGGAAGAAAAATCTGCTACTGTACCACCAGGCGGGGTTTGAATTTGAACGACCAACGCACAGCAC
AGCACAGCACAG-------CACAGGCGCAGGGGGGCGAGGGCGAGAGA-----GACCGTGCTCACGTTCGGGAAGGGGCC
GACGCCTGCCTGCCT--------CCATCCAAAAATCC-CCATCGCTTCCCCGTCTTTTCCTTCCTCCCTCCCTCGCTTGC
TTCTCCCTCCCTCACCCACCGCCCTCTCCATCCTTCCTCCCCTTCCTCCTGTTTCCCGTACCACACCACCACACCACACC
GCACCACGCTGCCGCGCTGCCATCATCCGCCCGGATAGGAGCGCCACCCTACCAATCGCGGTTGCTTTCCCCCGCCCCAA
CCACTCCAACACCGCGCCGAGCCGAGCCGATCCAATCCAATCC---------AACCC-TCTCCGCACCCGATTCCAATCG
CGCCTCC-ACCAGCTCCGACCTCCTCCA--------------GCGGCGATCGAGCGGATCCGGGCGCCGCCCCGTTTACC
TCTCCCTGTGATGCGCGGATCCGGGCGGTGACCGGCGGCGGGAGCGGGCG-AGCCATGCCGAGCGTGGGCGTGAAGATCT
ACAGCGTCTTCTTCAAGCTGCTGCTGCGCCACCGCCTGCAGTCGCTCGCCGCC---GC------CGCCGCGGCCGACGGG
GACGGCGACGCGGGCTCCTTCGGGGTCTCCTGCCGCGCCGACGAGGCCACGGCGCCGGCCAACCCGGCCTTCTCCGCGGC
CGACGGGGTCGCCTCCAAGGACCTCCACATCGACCCCAACTCGGCGCTCTCCGTCCGCATCTTCCTGCCCACGCCGCCGC
CGCACCACCCGCACCTCCTCCACCCGCGCCGCGCCAGCGACCCCGCCGCCGGCCAGGCGGGCGCGCCCTACCGGGGCTAC
CTCCCGCACGCCGTCTCCTCCCCGCGGGCCGCCGCCTCCGCGCGCCGCCGGCTGCCCATCGTCGTGCAGTTCCACGGCGG
CGGCTTCGTCACCGGGAGCAACTGCTCCGCCTCCAACGACGCCTTCTGCCGCAGGGTCGCCAAGTTCTGCGACGCCATCG
TCGTCGCCGTCGGCTACAGGCTCGCGCCCGAGAGCCGCTACCCCGCCGCCTTTGATGACGGGGTCAGGGTGCTCAGGTGG
ATCGCCAAGCAGGCCAATCTCGCCATGATGAGCAAGGTTGGGGGCGGGGTGGACACGTTCGGCGCCTCCACCGTCGAGCC
ATGGATCGCTGCGCATGGCGATCCGGCAAGGTATAATTTAATTCAGGTTCTATGATCTCTCG-TTTGTAATTGCACTATT
TGCTACTTTTCTACTTTACTAAATGGCCAAGGAACATAATACTGCAGTGTGAAGTTGCCCAAAAGCGGGCAAGTCAAGCG
ATAGGAATTTTTGTTTCATTTCTTCAATGGAAGTTCTTGTTTGTGATTCACCAGCATTGTTTCAAAAACTGCAAACGAGA
ATTGCGCTAGTTAAGTGAACATGTCAAAACGATGAAGATATAGTTCACTAGTCTATTCGATCTGTTATTGTTTCAAATAT
GGAGATGGTAATTTCCCTGTGAGATGCCATTCTGGCTAGCAGCAGGTTTAGAGAGAGCTCATGAGTATGTCATTTCCCTG
TGAGATGCCATTCTGACTAGCAGCAGGTTTAGAGAGAGCTCATGAGTATGCCATTTCCCCGTGGGTTGCCATTTCGGACT
AGCAGCAGGTTTAGAGAGAGCTCATGAGTATGTCATTTCCCTGTCGGTTGCCATTTCGGACTAGCAGCAGGTTTAGAGAG
AGCTCACGAGTATGTCATTTCCCCTTGGGTTGCCATTTCTGACTAGCAGCAGGTTTAGAGAGAGCTCATGAGTATGTCAT
TTCCCTGTCGGTTGCCATTTTGGACTAGCAGCAGGTTTAGAGAGAGCTCACGAGTATGTCATTTCCCCTTGGGTTGCCAT
TTCTGACTAACAGCAGGTTTAGAGAGAGCTCATGAGTATGTCATTTCCCTGCGAGTTGCCATTTCTGACTAGCAGTGGTT
TGGAGACCATGAGTACGACATTTCCCCTCGAGTTGCAATTTCTTACTGGAAGCAGGTTTAGAGCTCATGAGTATGTTGAC
CGGGGAAGATTCAATGTTTACAAGCTGACAGTTATACTCACTTATCATATGGTGTGCACTTTCTGTTATATCTTACCATT
TGCATGTACCTTAGCTTTTTGTGTGGACTCTGATTGGGTACACAGGCTCACAACATAGAAGCATCAAATATCCAAATATT
AGTTGATTTAGTTCACCAGGATTACATGCTCCTAATGATGTTGACATTTTGAAGATGTCAATGCAACTTTACAAGATTTG
CTTGACCGTTGGCATGTGGAAAGACCTTTTCTTTGTGAAATTTTCTAGGGCACATGTTTTCAACAAAGCTCTATATTTCG
GTAGGTACTATATGTTGAGTAAATAACTGCTAATGATGTCACCACAGTCCAATGACCTTGAACACTAGTGAAGGCATGCA
ATTTTCATATTACTGATTCTGGGATTCTTTATTGGTCACGTTTGTTTACCTAACTTATTAATGAAATTCAATTGCACTGA
ACTGTTGGATTGAATAGATCAGTTAAAACTTATGCTGGTCTGCTCCATTACCTATAATGAAGATTTTATTTTAACTACGA
TTTCAGTAGAACCTGGTGAAATTAGTACCTTTCTCATGCCTTTTTATTATGTCCGTGATCTCTTAAATGTGATGTATATA
TTGATGGACTGTCATCATCTCAAACCTTGGTTGCTTGGTGTATCACACCTACCTGAGTTTAGACCCCTCAACAGATTAAG
TGCCCACTTCAATTTAATTTGAAATAGAATAGCTGCATACGTGCTAACATCATTAAATGGTTCTTGCCTTCTACCTATAA
GAGACAAAAGAATATATCTAGTAATTTATTGTAAATCCTTTTGTTTTAACTGTTGTACATTTGTGTTGCTGGAGTTTGAC
CAGATCATCCGTCTTTTCCTTGG-AGCAGATGTGTCCTACTTGGTGTAAGCTGTGGTGCCAACATTGCTGATTTTGTCAC
TAGGAAAGCGGTGGAAGATGCAAAGCAATTTGACCCAGTCAAGGTCGTAGCACAGGTTCTGATGTATCCCTTCTTCACAG
GAAGTGTTCCAACACACTCGGAAATAAGGCTTGCGAACTCATACTTCTACGACAAATCCACATGCTTACTTGCCTGGAGA
CTACTTTTATCAGAGAAAGAGTTCAGCTTGGACCATCCTGCTGCCAACCCCCTGGCCCCTGGCAGAGGAGGCCCCCCATT
GAAATGCATGCCCCCAACCTTGACAATCGTTGCGGAACACGACTGTATGAGAGACAGAGCAATTGCTTACTCCGAGGAAC
TCCGCAAGGTAAATGTGGACGCGCCAGTCCTCGACTACAAAGATACCGTCCATGAGTTTGCAACACTCGATGTGTTCCTT
AAGACACCACAGGCCCAGGCCTGTGCCGAAGATATTGCCATATGGATGAAGAAATACATATCCCTGAGAGGGCACGAGTT
CTCGTATTAGCTGTAGCAAAAGGTCAGCGTTGTGAAATAGAGTCTTTACGGGAAGCATCGGTGCATTCTTTTTCACCTGG
TGATGGGAGGCACTGCAAGTTAAAAGGCGAGGAACCAGTTAGGCGTAATGT--GAGTGCTGAGTACCTTTCCCCTTTATT
GATGATCCTTGTGGAAGAATGTAGTGTGCAAATTGTAGACTGAACTCAAAGACAGATGCTCTTCCGCCTCATAGAGCTCA
ATTCTTTCATTCCTTTTGTACCCTTTGTGAAGTATTGAATTGCCGGGTCTCGAAATCACCAATTTTTGAGAAAAGAATTA
TCACCCAAAGCTGTTGGTGGCATGCCATAACACGTGAATAATTTATACCATCCAACATTGTCAACCTTGTTGCTCTAGTG
CCTTCCTACTTGGTTTGCCTTGAAATGTCACTGTGT------TTTGACTTTATAACATAATTATCTGAGT------TTCT
GATTAAATGAGAGTTATCTTTGTGTGCTTGCTACGCATTTCCTTAAAAGT---ATCGACTTTGATGTTGCAAGGCTTTAA
AGTGAAACCTGTAG---AAAGACATGCTTCATGCTGACACTAACATATTCCAGGCTTAAGTTTCTCATCCAAGTATCTGC
TAACTTATTGTTGAATCATTGTCCATGTTCCTTTTCACCTAAAGAAAAC---TGGTAGTTAAAAAGCAATACGCCACATA
GTTGAAATCCTGAGAGTGGGTTAACAATAATCAAATGAAGATGTTTAATCATGTGAAAAAAGGACGATGCGAAATCAGCA
TGAACTGTTTATCTGAAAAAACAGTCTCCACAGCAATCAAACTTCATGGGCTAGTTGCAGTTGTCTTCTTAGAGCAACTC
TAGCAGACCCCGCATCCCGCCCCGACCTGCAAAATAACCACCAAATTGCGGGTCGGGACGGAAAAACCTGCCCGATCAAA
CCCCGCATCTCGTCCCGGCCCGTAAGTATTTTTGCGGGGCGCGGCAAATCTTCTCCCCCAACCTCTATCTTCA
>chr3D_1
GATCCTCCGGCGTGCAATCCGGCGTTGACCGTTGCCATGGACGAGGATTTCTATACGTGCCTTCCGGAAAGCTATCTGCC
TCTGTTCCAGCTGAATTGCTTAGGCTAAATTAGCATAGAAAACG--GAGGCTACGACTAGCACCG----ACACAACAGAG
AAGGAGAAAAT-GAAGGG--------------------CAATCGTTTCGCATAAAGAAGTGCTTCCGCTGGGACACACAC
A---------------CGCTTTCACGTGAAACGATGGAATCTGGGAGTAGG------CAGGCATCGTACC-TGCACCGTT
TAATGCACTCCACGTTGTTGGAGATAAAAAAAA-CCTGCCGAATTATAC-----------TCGCTCCACC---AGGCGAA
ATGTGAGAACGGAAACTGCAAAGAGCGAACCCCAGG--------------------CTAGTACTAGTACCACCACCA---
---CCTCGCAAGGAGGGGAAGAAAAATCCACTACTGTACCACCAGGCGGGGTTTGAATTTGAACGACGAACGCACAGCA-
--------ACAGCACAGGCCACAGGCGCAGGGGGGCGAG------AGA-----GACCGTGGTCACGTTCGGGAAGCGGCC
GACGCCTGCCTGCCTGGTAGCAACCATCCAAAAATCCTCCATCGCTTCCCCGTCTTTTCCTTCCTTCCTCGCTAGCTT--
------CTCCCTCACCCACCTCCCTCTCCATTCTT-----CCTTCCTCCTGTTTCCCGTACCATACCACCACACCACACC
-----ACGCTGCTGCGCTGCCATCATCCATCCAGATAG-----CCACCCTACCAATCGCGGTTGCTTTCCCTCGCCCCAA
CCACTCCAACACCGCACGGAGCCGAGCCGATCCAATCCAATCCGGCCCCATTAACCC-CCTCCGCGCCCGATTCCAATCG
CGCCTCC-GCCAGCTCCGACCTCCTCCCGGCCGAACCCGTCGGCGGCGATCGAGCAGATCCGGGCGCCGTCCCGTCTACC
TCTCCCTGTGATGCGCGGATCCGGGCGGTGACCGGCGGCGGGAGCGGGCG-AGCCATGCCGAGCGTCGGCGTGAAGATCT
ACAGCGTCTTCTTCAAGCTGCTGCTGCGCCACCGCCTCCAGTCGCTCGCCGCC---GCCGCCGGCGCCGCCGCCGACGGC
GACGGCGACGCGGCCGCCTTCGGTGTCTCCTGCCGCGCCGACGAGGCCACGGCGCCGGCCAACCCGGCCTTCTCCGCGGC
CGACGGGGTCGCCTCCAAGGACCTCCACATCGACCCCAACTCGGCGCTCTCCCTCCGCATCTTCCTCCCCACGCCGCCGC
CGCACCACCCGCACCTCCTCCACCCGCGCCGCGCCAGCGACCCCGCCGCCGGCCAGGCGGGCGCGCCCTACCGGGGCTAC
CTCCCGCACGCCGTCTCCTCCCCGCGGGCCGCCGCCTCCGCGCGCCGCAGGCTGCCCATCGTCGTGCAGTTCCACGGCGG
CGGCTTCGTCACCGGGAGCAACTGCTCCGCCTCCAACGACGCCTTCTGCAGGCGGGTCGCCAAGTTCTGCGACGCCATCG
TCGTCGCCGTCGGCTACAGGCTCGCGCCCGAGAGCCGCTACCCCGCCGCCTTTGATGACGGGGTCAGGGTGCTTAGGTGG
ATCGCCAAGCAGGCCAATCTCGCCATGATGAGCAAGGTTGGGGGCGGGGTGGACACGTTCGGTGCTTCCACCGTCGAGCC
CTGGATCGCTGCGCATGGTGATCCGGCAAGGTATAATTTAATTCGA-TTCTGTAATCTCTCCTTTTGTAATTGCATTTCT
TGCTACTT--CTACTTTACTAAATGGCCAAGGAACATAATACTGCAGTGTGAAGTTGTCCAAAAGTGGGCAAGTCAAGCG
ATAGGAATTTTTATTTCATTTCTTCAATGGAAGTTCTTGTTTGTGATTCACCAGCATTATTTCAGAAACCGCAAATGAGA
ATTGCGCTAGTCAAGTGAACATGTCAAAACGATGAAGATATAGTTCCCTAGTCTATTAGA--------------------
--------------------------------------------------------------------------------
-----------TCTGACTAGCAGCGGGTTTAGAGAGAGCTCACGAATATATCATTTCCCCGTGGGTTGCCATTTCTGACT
AGCAGCG--------------------------------------------------------------GGTTTAGTGAG
AGCTCACGAATATATCATTTCCCCGTGGGTTGCCATTTCTGACTAGCAGCAGGTTTAGAGAGAGCTCATGAGTATGTCAT
TTCCCCGTGAGTTGCCATTCTGG-CTAGCAGCAGGTTTAGAGAGAGCTCACGAGTATGTCATTTCCCCGTGGGTTGCCAT
TTCTGACTACCAGCAGGTTTAGAGAGAGCTCATGAGTATGTCATTTCCCCTCGAGTTGCCATTTCTGACTAGCATTGGTT
TAGAGACCATGAGTACGACATTTCCCCTCGAGTTGCAATTTCTGACTGGCAGCAGGTTTAGAGCTCAGGAGTATGTTGAC
TGGGGAAGATTCAATGTTTACCAGCTGACAGTTATACTCACTTAACATATGGTGTGCACTTTCTGTTATATCTTACCATT
TGCGTGCACCTTAGCTTTTTGTGTGCACTCTGATCGGGTACACAGGCTCACAACATAGAAGCATCAAATATCCAAATATT
AGTTGATTTAATTTGCCAGGATTACATTCTCCAAATGATGTTGACATTTTGAAGATGTCAATGCAACTTTACAAGATTTG
CTTGACCGTTGGCATGTGGATAGGCCTTTTCTTGGTGAAATTTTCTAGGGCACATGTTTTCAACAAAGTTCTATATTTCG
GTAGGTAGTATATGTTGAGTAAATAACTGCTAATGATGTCACCACAGTCCAATAACCTTGAACACTAGTGAAGGCATGCA
ATTTTCATATTACTGATTCTGGGATTCTTTATTGGTCATGTTTATTGACCTAACATATTAATGAAATTGAATTGCACTGA
ACTGTCGGATCGAATAGATCAGTTAAAACTTACTCTGGTCTGCTTCCTTACCTATAATGAAGATTTTATTTTAACTATGA
TTTCAGTAGAACCTGATGAAATTAGTACCTTTTTCGTGCCTTTTTATTATGTCCGTGATCTCTTAAATGTGATGTACATA
TTGATGGACTGTCATCATCTCAAACCTTGGTTGCTTGGTGTATCACACCTACCTGAGTTTAGACCCCTCAACAGATTAAG
TGCCCACTTCAATTTAATTTCAAATAGAATAGCTGCATATTTGGTAACATCATTAAATGGTTCTTGCCTTCTACC--TAA
GAGACAAAAGAATATATCTAGTAATTTATTGTAAATCCTTTTGTTTTAACTGTTGTACATTTGTGTTGCTGGAGTTTGAC
CAGATCACCCGTCTTTTCCTTGG-AGCAGATGTGTCCTACTTGGTGTAAGCTGTGGTGCCAACATTGCTGATTTTGTCAC
TAGGAAAGCGGTGGAAGATGCAAAGCAATTTGAGCCAGTCAAGGTCGTTGCACAGGTTCTGATGTATCCCTTCTTCATAG
GAAGTGTTCCAACACACTCGGAAATAAGGCTTGCGAACTCATACTTCTACGACAAATCCACATGCTTACTTGCCTGGAGA
TTACTTTTATCAGAGAAAGAGTTCAGCTTGGACCATCCTGCTGCCAACCCCCTGGCCCCAGGCAGAGGAGGCCCGCCACT
GAAATGCATGCCTCCAACCTTGACAATCGTTGCGGAACACGACTGTATGAGGGACAGAGCAATTGCTTACTCCGAGGAAC
TCCGCAAGGTAAATGTGGACGCGCCAGTCCTCGACTACAAAGATACAGTCCATGAGTTCGCAACACTTGATGTGTTCCTC
AAGACGCCACAGGCCCAGGCCTGTGCCGAAGATATTGCCATATGGATGAAGAAATACATATCCCTGAGAGGGCACGAGTT
CTCGTATTAGCTGTAGCAAAAGATCAGCGTTGTGAAATAGAGTCTTTACGGGAAGCATCGGTGCATTCTTTTTCACCTGG
TGATGGGAGGCACTGCAAGTTAAAAGGTGAGGAACCAGTTAGGCGTAATATGAGAGTGCTGAGTACCTTTCCCCTTTATT
GATGATCCTTGTGGAAGAATGTAGTGTGCAAATTGTAGACTGAACTCAAAGACAGATGCTCTTCCGCCTCATAGAGCTCA
ATTCTTTCATTCCTTTTGTACCCTTTGTGAAGTATTGAATTGCCGGGTCTCGAAATCACC-ATTTTTGAGAAAAGAATTA
TCACCCTAAGCTGTTGG---CATGCCACAACACGTGAATAATTTATACCATCCAACATTGTCAACCTTGTTGCTCTACTG
CCTTCCTACTTGGTTTGCCTTGAAAT-------ATCAATTTGTTTGACTTTGTAGCATAATTATCTGGGT------T-CT
GTTTAAATGAGAGTTATCTTTGTGTGCATGCTACGGATTTCCTTGAAAGT---ATCAACTTTGATGTTGCAAGGCTTTAA
AGTGAAACCTGTT---AAAAGACATGCTTCATGCTGACACTAACATATTCCAGGCTCAAGTTTCTCATCCAAGTATCTGC
TAACTTATTGTTCAATCATTGTTCATGTTCCCTTTCACCTAAAGAAAAC---TGATAGTTAAAAAGCAATACGCCACATA
GTTGAAATCCTGAGAGTGGGTTAACATTAATCAAATGAAGATGTTAAACCATGTTAGAAAATGACGATGCGAAATCAGCA
TGAACTGTTTCTCTGGAAGAACACTCTCCACAGCAATCAAACTTCATGGGCTAGCTGCAGTTGTCTTCTTAGA-------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr3B_1
GATCCTCCGGCGTGCAATCCGGCGTTGACCGTTGCCACGGGCGGGGATTTTTATACGTGCCTTCCAGAAAGATATCTGTG
TCTGTTACAACAGAGTTGCTGAACCTG-ATTGGCATAGAAAATGGAGAGGCTATGACTACCACCG----ACACAACAGAG
GAGGCAAAAAATGAAGGGGGAAGACCTATTGTTTCACATAAAGATTTC-CATAAAGAAGTGCTTGTGCTGGGACACACAC
GCACCAGCTTGGGAGGAGCTTTCACGTGAACCGATGGAATCTGGGAGCAG------ACAGGCATCGTACC-TGCACCGTT
TAATGCACTCCACGTTATCGGAGTTAAAAAA-A-CCTGCCGAATAATACCACCATAGCACTCGCTCCACCACTAGGCAGA
ATGTGAGAACGGAAACTGCAAAGCGCAAACCCAGGCAAGTCGTGATACAGCTACTACTACTTCTAGTACCACCACCA---
--------------------------------------CCACCAGGCCGGGTTTGAATTTGAACGACGAACGCGCAGCA-
--------ACAG-------CGCAGGCGCAGGGGGCCGAG------AGAAGAGGGACCGTGGTCACGTCTGGGAAGCGGCC
GACGCCTGCCT----------------CCAAAAATCC-CCATCGCTTCCTCGTCTTTTCCTTCCTCCCTCCCTCGCTTGC
TTCTCCCTCCCTCACCCACCGCCCTCTCGATCCTT-----CCTCCCCTTGCTTCTCTCTCCCGT---ACCAGACCGCACC
-----ACGCT-----GCTGCCATCATCCGTCAGGATAG-----CCACCCTACCAATCGCGGTTGCTTTCCCTCGCCCCAA
CCACTCCAACACCGCACGGAGCCGAGCCGATCTAATCCAATCCGGCCCCATTAACCCTCCTCCGCGCCCGATTCCAATCG
CGCCCCCCGCCAGCTCCGATCGAGGCAGGGGGATTC-----------------GCAGATCCGGGCGCCGTCTCG-----C
TCTCCCTGTGATGCGCGGATCCGGGCGGTGACCGGCGGCGGGAGCGAGCCAAGCCATGCCGAGCGTCGGCGTGAAGATCT
ACAGCGTCTTCTTCAAGCTGCTCCTGCGCCACCGCCTCCAGTCGCTCGCCGCCGCGGCCGCCGCCGACGGGGGCGGCGGG
GACGGCGACGCGGCCGCCTTCGGGGTCTCCTGCCGCGCCGACGAGGCCACGGCGCCGGCCAACCCGGCCTTCTCCGCCGC
CGACGGGGTCGCCTCCAAGGACCTGCACATCGACCCCAACTCGGCGCTCTCCGTCCGCATCTTCCTCCCCACGCCGCCGC
CGCACCACCCGCACCTCCTCCACCCGCGCCGCGCCAGCGACCCCGCCGCCGGCCAGGCGGGCGCGCCCTACAGGGGCTAC
CTCCCGCACGCCGTCTCCTCCCCGCGGGCCGCCGCCTCCGCGCGCCGCAGGCTGCCCATCGTCGTGCAGTTCCACGGCGG
CGGCTTCGTCACGGGGAGCAACTGCTCCGCCTCCAACGACGCCTTCTGCCGGAGGGTCGCCAAGTTCTGCGACGCCATCG
TCGTCGCCGTCGGCTACAGGCTCGCGCCCGAGAGCCGCTACCCCGCCGCCTTTGATGACGGGGTCAGGGTGCTTAGGTGG
ATCGCCAAGCAGGCCAATCTCGCCATGATGAGCAAGGTTGGGGGCGGGGTGGACACGTTCGGTGCCTCCACCGTCGAGCC
CTGGATCGCCGCACATGGTGATCCGGCAAGGTATAATTTAATTCGG-TTCTA--ATCTCTCG-TTTGTAATTGCATTTCT
TGCTGCTT--CGACTTTACTAAATGGCCTAGGAACATAATACTGCAGTGTGAAGTTGCCGAAAAGCCGGCAAGCCAAGCA
ACAGGAATTTTTGTTTCATTTCTTCAATGGAAGTTCTTGTTTGTCATTCACCAGCATTATTTCAGAAACTGCTAACAAGA
ATTGCCCTAATTAAGTGAACATGTCAAAACGACGAAGATATAGTTCCCTA-TCTATTCGATCTGTTATTGGTTCAAATAT
GGAGATAGTAA-------------------------------------------------------------TTTCCCTG
TGAGATGCCATTATGACTAGCAGCAGGTTTAGAGAGAGCTCATGTGTATGTCATTTCCCCGTGGGTTGCCATTTCGGACT
AGCAGCAGGTTTAGAGAGAGCTCATGAGTATCTCATTTCCCCGTGGGTTGCCATTTCGGACTAG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CAGCAGGTTTAGAGAGAGCTCATGAGTATGTCATTTCCCCGCGAGTTGCCATTTCTGACTAGCAGTGGTT
TAGAGACCGTGAGTACGGCATTTCCCCCTGAGTTGCCATTTCTGACTTGCAGCAGGTTTAGAGCTCATGAGTATGTTGAC
CGGGGAAGATTCAATGTTTACAAGCTGACAGTTATACTCAC-TAACATATGGTGTGCACTTTCTGTTATATCTTACCATT
TACGTGCACCTTAGCTTTTCGTGTGGACTCTGATCGGGTACACAGGCTCACAACATAGAAGCATCAAATATCCAAATATT
AGTTGATTTAGTTCACCAGGATTACATTCTCCAAATGATGTTGACATTCTGAAGATGTCAATGCAACTTTACAGGACTTG
CTTGACCGTGGGCATGTGGATAGACCTTTTCTTTGTGAAATTTTCTAGGGCACATGTTTTCAACAAAGTTCTATATTCCG
GTAGGTTGTATATGTTGAGTAAATAACTGCTAATGATGTCACCACAATCCGATAACCTTGAACACTAGTGAAGGCATGCA
ATTTTCATATTACTGATTCTGGGATTCTTTATTGGTCATGTTTGTTGACCTAACTTATTAATGAAATTCAATTGCACTGA
ACTGTTGGATCGAATAGATCAGTTAAAACTTACGCTGGTCTGCTCCCTTACCTATAATGAAGATTTTATTTTAACTATGA
TTTCAGTAGAACCTGGTGAAATTAGTACCTTTCTCATGCCTTTTTATTATGTCCGTGTTCTCTTAAATGTGATGTATATA
TTGATGGACTGTCATCATCTCAAACCTTGGTTGCTTGGTGTATCACACCTACCTGAGTTTAAACCCCTCAACATAT---G
TGCCCACTTCAATTTAATTTGAAATAGAATAGCTGCATATGTGCTAACATCATTAAATGGTTCTTACCTTCTACCTATAA
GAGACAAAAGAATATATCTAGTAATTTATTGTAAATCCTTTTGTTTTAACTGTTGTACATTTGTGTTGCCGGAGTTTGAC
CAGATCACCCGTCTTTTCCTTGGGAGCAGATGTGTCCTACTTGGTGTAAGCTGTGGTGCCAACATTGCTGATTTTGTCAC
TAGGAAAGCGGTGGAAGATGCAAAGCAATTTGACCCAGTCAAGGTCGTAGCACAGGTTCTGATGTATCCCTTCTTCATAG
GAAGTGTTCCAACACACTCGGAAATAAGGCTTGCGAACTCGTACTTCTACGACAAATCCACATGCTTACTTGCCTGGAGA
TTACTTTTATCAGAGAAAGAGTTCAGCTTGGACCATCCTGCTGCCAACCCCCTGGCCCCTGGCAGAGGAGGACCCCCACT
GAAATGCATGCCCCCAACATTGACGATCGTTGCGGAACACGACTGTATGAGAGACAGAGCAATTGCTTACTCCGAGGAAC
TCCGCAAGGTAAATGTGGATGCGCCAGTCCTGGACTACAAAGATACAGTCCATGAGTTCGCAACACTCGATGTGTTCCTC
AAGACACCACAGGCTCAGGCCTGTGCCGAAGATATTGCCATATGGATGAAGAAATACATATCCCTGAGAGGGCACGAGTT
CTCGTATTAGCTGTAGCAAAAGATCAGCATTGTGAAATAGAGTCTTTACAGGAAGCATCGGTGCATTCTTTTTCACCTGG
TGATGGGAGGCACTGCAAGTTAAAAGGCGAAGAACAAGTTAGGCGTAATGT--GAGTGCTGAGTACCTTTCCCCTTTATT
GATGATCCTTGTGGAAGAATGTAGTGTGCAAATTGTAGACTGAACTCAAAGACAGATGCTCTTCCGCCTCGTAGAGCTCA
ATTCTTTCATTCCTTTTGTACCCTTTGTGAAGTATTGAAATGCTGGGTCTCGAAATCACC-ATTTTTGAGAAAAGAATTA
TCAT-CTAAGCTGTTGG---CATACCATAACACGTGAATAATTTTTACCATCAAACATTGTCAACCATGTTGCTCTACTG
CCTTCCTACCTTTGTTTGCCTCTTGAAATATTAATCATTTTGTTTGAAATTATAAGATGAAGTGCAGTGTCATAAGT-CT
GCTTAAACGAGAGTTATCCTTGAGTGCACATTACGTTTTTTCCCCTTCAAAGCATCAACTTTGATGTTGCAAGGCTTTAA
AGTGAAACCTGTTACTAAAAGACATGCTTCATGCTGCCACTAACATATTCCAGGCTCAAGTTTCTCATCTAAGTATCTTG
TAACTTATTGTTCAATCATGGTTCATGTTCCTTTTCAAATAAAGTAAACTTATGATAGACAAAAAGCAATACTCCACATA
ATTGAAATCCTGGGAGTAGGTTAGCAATAATCAAATGAAGGTGTT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>SNPs
---S-S----------------------------------------------------S-------------S-----S-
----S------S-------SSSS-SS-SSSSS-S-SS-SSSS-SSSSSS--S---S-SSSSSSSSSSSS-----------
----------S--------S------S-S-SSS-SSS-----S----SS----------------S--S-------S---
--------------------------------------------------SSSSSS--------------S---------
---------------------------------S---------------------------------S------------
----------SSS----------------------------------------------------------------SSS
SSS-------------------------SS-------------------------------------S-----------S
SSSSSSSS-------------------------------SSSSSS---------------S--------------S----
--------------------------------------------------------------------------------
-----------------------------------SSSSS-----------------------S----------------
SSSSS-------S----------------S--------SSSSS----------------------------S--------
---------------S-S----------------------------------------S------S--------------
--------S------------------S---------------------------S-------------S-----S----
------------------------------------------------------------------S-------------
-------------------------------------S------------------------------------------
-------------S-S----------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
---------------------------------------------------S----------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------S-----------------
S-----------------S-------------------------S-S------S---------------------S-SS-
--------SS----------------------------------------------------------------------
----------------------------------------------------------S-----S---------------
----------------------------------------------S-----------------------S---------
------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
--------------------------------------------------S-----------------------------
-------------------------------S---------S--S-------------------SSSSS-------S---
---------S---S----------S-------------------------------------------------------
-----S--SS---------S---S--------------------------------------------S-----------
---------S---------------------------------------S------------------------------
-S-----------------------------------------S-----S------------------------------
--------------------------------------------S-----------------------------------
---S--S---------------------------S---------------------------------------------
---------------------------S----S-----------------------------------------------
--------------------S-----------------------------------------------S-----------
-------S---------------------------------------------S--------------------------
--------------------------------------S-------S---------------------------------
----------S---------------------S-------------S------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
S-----------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
----------------------------------------------S-----------S--------------------S
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
------S----------SSS---------------------------------------------------------S--
--------------------------SSS-S-SSSS-------------------------------S---------S--
-S-------------------------S-------S--------S-----------S-----------------------
------------SS------------------------------------------S-----------------------
------------S---------S-------------------------------S-------------------------
---------------------------------------------S--S-----S-S----S------------------
----------S----S--S----S------------------------------S------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_85
-----------------------------------------------------------------AGAAAGCCATCTGGG
TCTGC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2108
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---------------------------CATTCTGGCTAGCAGCAGGT---------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>forward_784
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CCTCCTGTTTCCCGTACCAC----------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>reverse_2755
--------------------------------------------------------------------------------
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----------------------------------TGGGTACACAGGCTCACAAC--------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>forward_2127
--------------------------------------------------------------------------------
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---------------------------CATTCTGGCTAGCAGCAGGT---------------------------------
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-------------------------------------------------------------------------
>reverse_3153
--------------------------------------------------------------------------------
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--------------------------------TGCTGGTCTGCTCCATTACC----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>forward_2420
--------------------------------------------------------------------------------
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TTCCCTGTCGGTTGCCATTT------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3839
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------------------------------------------------------------------------------TT
GAAATGCATGCCCCCAAC--------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>forward_2901
--------------------------------------------------------------------------------
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-TTGACCGTTGGCATGTGGAA-----------------------------------------------------------
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>reverse_4419
--------------------------------------------------------------------------------
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------------------GGCATGCCATAACACGTGAA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
