>input_sequence_25314
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----------------------------------------------------------------ATGGCGCTCGTCTCCG
CGCCCGCGCCCGCCGCGGTGTGGACGGCTGTGTCGCCGCCGGCCGAGGCGAACGGGAGCTCCGACAGGAAGAAGAAGTCG
GTGCC-CCCACTTTTTACCCTTTTCGGCAAAATTCGGGTTTCGCCTCCGATTTCCTCTTTTGGTTCGTTGCGTGCGGAGT
ATTTTCTCTGGGATTCCCTCTCACCAGCCTTTCATTTTCTCTCCCGTGTTTGGTTATAGGAGGAAAGCGGAGGACGGCGA
AGGGTGCAGGACGTGCAGCTGCAAGAAGTCCAGGTGCCTGAAGCTGTAAGTCGCACGATTTTTCCACTGTCTCGCTGGTA
ATGCCAAATGCTGCAAATGTCTCATCGTAGAACGCCTGAATTTAGTGAGGGGA-GAGATATAGCGAGCTTGGATTCTCAG
TGCATCTTCTAATTGTTTAGGA-GCAATTGGCGTTTTGATCCGGCACTAGTTCAGTTGGACATCTGCAATGAGTCTGGTG
CTCTTTTTTAGCAACTCTAGATTCGGTGGTCGAGCATTTCAGATGTTTGATGGATAAGGCACCCAATGTAGCCAATCGAG
ATCCCTAAAGATTTTGTGACTCTATTTGAGCATGTTTACCAGCTCTATTTGAACATGCCTACAACTTAAAAAAACACAGC
TTTATCCAAGCATGTTGATTTGTTGTTTCAATTTTACGTTCACCTGTACTTACTGGTTACTGCTGCAATGTCACACACTT
GAAGCACAATTAAAATTAGTAGATTGGCTGTGATTCTGGTCTAGCTGTACATAGCCTGCGTGTTAGTGTAAGGCTTCACA
-----GCACTCTTGCAATGGAGGGAACTGAGTTTCTGGCAGGGGG--------TGGT-----------------------
--------------------------------------------------------------------------------
-----------------------GATGCATGGAAAAGATGGGGAATGCTGACTTTTGCATGCACTGATGCACCCACCCTG
CACACACAAAACATACACCATACCTATCTATCCACGCTCATGCATACC-CACAACATGATTTATGATTTCTTACTGCTAA
ATTCAAGTTCATTACTGTTGTACTGATCAATTGCTTTATGTCTTGGCAGTTATTGTGTGTGTTTTGCTTCTGGGTCACAG
TGTTCTGAATTATGTGGCTGTGACCCATGTTATAACAAGACTATTCATGGTGTTCAACAGAATACACCACCAGGCTTGCC
TTTGCAAGTTGTTCGACCAGCAGAGGGTGGTCAAAATTCAGCGGTATAAATCTTGTTCAAACATGACATGGTAAATGTGT
AGCTATTTCCTTGTTCTATTTTTGACGATCCTGATACTTCTATTC-TTCTCTCAAGGAATTTGCAAGATACCAAATTGAT
TTTTTTAGAAGAAAATGCACTTGCAAAAAGTCAGGCTGCCTTAAGAAATACTGTGACTGCTATCAGGTTCTCTATCCAAC
TCTATCCTATTTTTTAAAAAACGACAACCCTATCCTATTAGTTTTTCTCTTCTCTCAGTTTGTGACTGGTATTTTTTTTC
TTCTGTGTTTGAAGGGAGGGGCGGGATGCTCCATCAACTGTAAATGCGATGATTGTAAAAATCCATATGGGAAAAAAGGT
AACATAA-TCTAGTGCCAACTCTTGGAACTAGTGAACTACGTACTAAATTGCAAGATGTTAAAGTCAGTGCTGTGTAAAA
TGATATGTGC----------------------------TATTTGGTGGATGGGTAACTACTAATTCATGAATGGGTTGTC
ACAATATGAACGTGTTATCAAAGTTCAACTAATTATTATTATGTGTTTTTGCGTCTATGAGAACATTTTTGTTTTAGAGT
ATTTAAGATTGATTAAGAAAAGCACCACAGTTATGCAAACCACCGGTCTACACATATGGAATAGTATTTGCTATACTCTA
CATTCTATAGGTTGTACTCCATCTATATGGTACACGTTGTGAACTATATACACTGCACAATAAGGTAAATTACTCCCAGT
TAATTTATTAGTAGTGAAGATAAGCTAACTCGGCACTTAAATGTAAAAAAGGATGA---------TTTATAGGAGAATGA
TC------------------------------------------------------------------------------
-----------------------------------------------TATTATTTATATTATGTTCCTGCTTAATATTT-
GGCAGTGTTTACAACTGGCCATATGGTGTTACGGTACATTATCAATGTTTTGGTACCATAGATGACCTCAGCTTTTTACC
ACGTAATACTAACTCTGGAATGCATGCTGGTTCAGGGCCTTCAGAATAGCTTTGCTTTATTCTGCATATATTAGGTTAGG
ATATGTTGGAATTTGCTTGATGAATTCTATTGCAGTACCTTTTCTTCTTACAAAGATGTCTCATGTCGGACATAATATTG
GGGATTTATTTTTTCTGATGATTTGCTTGCTA-CCCCTAATGGGAGAAGCTGACTTGATCTCAGTTATAATTTTTGGTCT
GTACCT------AAAAACGAAATTTTGTTTGTTCATGTTGTGCAGTTGGTGTTATTTTGGATGGTAAAAGTATTCTTGCC
GCACCCACACCTACCCCAAA------TGAAAGGAATGGTGCGGAAGTTATCTCAAGTGATGATGATGATGATGATGAAGA
TGATTATTACATGAATCGTCCACTGTCACCTATCCCCCCATCTCCAGTATCCAGAGAGTCTTCATTCCAGCAGGAGACTC
TAGTGGGCGTTGAAGTTCATACTGTGAATGGGCACCTGTACCCGAAACCGCTGACCCAGGTGCGGCCAGAGTCATGGCAG
CTCTCGAGGAGGCCTGCCGAGGAAGCACGGGGAGATCAATGGCGCTACATGAGGAGGCCCAGCGAGGACGGAACATCCGA
TGCCATGGAAGGACACGCTGACCCCAAGTTTCATCATCAGAGAGACAGCAACAA---TAAACAGCGGGAGAGCCATGCCG
ACAACAGGTTCAGCATCCCGCGGTGCGTCGAGGTGATGAACGGCATGGCGGACCTTTCGCCGGTGGACAAGTCGCTCGCC
CCAGACGTCTTCTTGGATCCAAGCAACCGGGAGATTTTCCTGTCGCTGAGTGTAGATATCCGGACCATGTGGCTGAAGCG
AAAGATGAGGAGCCTTGTGTAG----------------------------------------------------------
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--
>chr5A_1_TraesCS5A01G054200
TGTGTCGGC-----------------------------------------------------------------------
----------------------------------------------------------------------------AACA
AACCCTATTTGCTCATATCTGCAAAC----------AGAGTTGGTATTGCGCTTGAAGCCGTTGCAACAAGGGCCATATT
CT-AAACTGG-ACTACATTGTATGAGTTGCTGTGGTCCGTTCGATCAAACTTAGATCCAACGGCCATGAAGGCAG----T
CAACGCGCAAAGAGTTATGAACGACTGTTTTTGAGTGTTTTCCTTTTGGAGATTACCATTTAAATTCGATAAATACTTCC
TCCGTTCCTA---AATATAGGG-TTTTTAGAGATTTTATATAATAAGAACTACAAGCGGATGCATATAGACATTTTTTAG
AGTGTATATTTATTCATTTTGCTCCATATATAGTCTTAATTA-AAATCTTT-AAAAAGACTTGTATTTAGTAACGGAGGG
AGTAATTTAG-TACTAGGAATTATAGTGTACTCCACTTTGTGCGTAAT---TAAGATCACTAATGGCCTCCTTACAATCC
TTGC---CGTAGAAAATCAGGAGTGAACCGG---GATCAAAAGAGGACCCACCGATCTGGACCCTCCAGCGGCCCGTCCC
GAATCCTAAAGCCCCCCACGCGCCGTCCGATCCACCTCCCCCTGCGCCTTCCTCTCCAATCCCACTCCGCCTCGTTCACT
CCTCCACCTCTCTCCCCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCTCGAGCCCTCCGGATCCGAGGCCCCCACAGACGCCCCCGCGCCCGCGCCCGC--------
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-----------------------------------------------------------------------------CCC
CGTCCCTCCCCCGCCTCCCGCCCCAGCCCCCGCCCCCGCTCCGGCCGCTCCTGCCACCGAAGCTATGGCGCTCGTCTCCG
CGCCCGCGCCCGCCGCGGTGTGGACGGCTGTGTCGCCGCCGGCCGAGGCGAACGGGAGCTCCGACAGGAAGAAGAAGTCG
GTGCC-CCCACTTTTTACCCTTTTCGGCAAAATTCGGGTTTCGCCTCCGATTTCCTCTTTTGGTTCGTTGCGTGCGGAGT
ATTTTCTCTGGGATTCCCTCTCACCAGCCTTTCATTTTCTCTCCCGTGTTTGGTTATAGGAGGAAAGCGGAGGACGGCGA
AGGGTGCAGGACGTGCAGCTGCAAGAAGTCCAGGTGCCTGAAGCTGTAAGTCGCACGATTTTTCCACTGTCTCGCTGGTA
ATGCCAAATGCTGCAAATGTCTCATCGTAGAACGCCTGAATTTAGTGAGGGGA-GAGATATAGCGAGCTTGGATTCTCAG
TGCATCTTCTAATTGTTTAGGA-GCAATTGGCGTTTTGATCCGGCACTAGTTCAGTTGGACATCTGCAATGAGTCTGGTG
CTCTTTTTTAGCAACTCTAGATTCGGTGGTCGAGCATTTCAGATGTTTGATGGATAAGGCACCCAATGTAGCCAATCGAG
ATCCCTAAAGATTTTGTGACTCTATTTGAGCATGTTTACCAGCTCTATTTGAACATGCCTACAACTTAAAAAAACACAGC
TTTATCCAAGCATGTTGATTTGTTGTTTCAATTTTACGTTCACCTGTACTTACTGGTTACTGCTGCAATGTCACACACTT
GAAGCACAATTAAAATTAGTAGATTGGCTGTGATTCTGGTCTAGCTGTACATAGCCTGCGTGTTAGTGTAAGGCTTCACA
-----GCACTCTTGCAATGGAGGGAACTGAGTTTCTGGCAGGGGG--------TGGT-----------------------
--------------------------------------------------------------------------------
-----------------------GATGCATGGAAAAGATGGGGAATGCTGACTTTTGCATGCACTGATGCACCCACCCTG
CACACACAAAACATACACCATACCTATCTATCCACGCTCATGCATACC-CACAACATGATTTATGATTTCTTACTGCTAA
ATTCAAGTTCATTACTGTTGTACTGATCAATTGCTTTATGTCTTGGCAGTTATTGTGTGTGTTTTGCTTCTGGGTCACAG
TGTTCTGAATTATGTGGCTGTGACCCATGTTATAACAAGACTATTCATGGTGTTCAACAGAATACACCACCAGGCTTGCC
TTTGCAAGTTGTTCGACCAGCAGAGGGTGGTCAAAATTCAGCGGTATAAATCTTGTTCAAACATGACATGGTAAATGTGT
AGCTATTTCCTTGTTCTATTTTTGACGATCCTGATACTTCTATTC-TTCTCTCAAGGAATTTGCAAGATACCAAATTGAT
TTTTTTAGAAGAAAATGCACTTGCAAAAAGTCAGGCTGCCTTAAGAAATACTGTGACTGCTATCAGGTTCTCTATCCAAC
TCTATCCTATTTTTTAAAAAACGACAACCCTATCCTATTAGTTTTTCTCTTCTCTCAGTTTGTGACTGGTATTTTTTTTC
TTCTGTGTTTGAAGGGAGGGGCGGGATGCTCCATCAACTGTAAATGCGATGATTGTAAAAATCCATATGGGAAAAAAGGT
AACATAA-TCTAGTGCCAACTCTTGGAACTAGTGAACTACGTACTAAATTGCAAGATGTTAAAGTCAGTGCTGTGTAAAA
TGATATGTGC----------------------------TATTTGGTGGATGGGTAACTACTAATTCATGAATGGGTTGTC
ACAATATGAACGTGTTATCAAAGTTCAACTAATTATTATTATGTGTTTTTGCGTCTATGAGAACATTTTTGTTTTAGAGT
ATTTAAGATTGATTAAGAAAAGCACCACAGTTATGCAAACCACCGGTCTACACATATGGAATAGTATTTGCTATACTCTA
CATTCTATAGGTTGTACTCCATCTATATGGTACACGTTGTGAACTATATACACTGCACAATAAGGTAAATTACTCCCAGT
TAATTTATTAGTAGTGAAGATAAGCTAACTCGGCACTTAAATGTAAAAAAGGATGA---------TTTATAGGAGAATGA
TC------------------------------------------------------------------------------
-----------------------------------------------TATTATTTATATTATGTTCCTGCTTAATATTT-
GGCAGTGTTTACAACTGGCCATATGGTGTTACGGTACATTATCAATGTTTTGGTACCATAGATGACCTCAGCTTTTTACC
ACGTAATACTAACTCTGGAATGCATGCTGGTTCAGGGCCTTCAGAATAGCTTTGCTTTATTCTGCATATATTAGGTTAGG
ATATGTTGGAATTTGCTTGATGAATTCTATTGCAGTACCTTTTCTTCTTACAAAGATGTCTCATGTCGGACATAATATTG
GGGATTTATTTTTTCTGATGATTTGCTTGCTA-CCCCTAATGGGAGAAGCTGACTTGATCTCAGTTATAATTTTTGGTCT
GTACCT------AAAAACGAAATTTTGTTTGTTCATGTTGTGCAGTTGGTGTTATTTTGGATGGTAAAAGTATTCTTGCC
GCACCCACACCTACCCCAAA------TGAAAGGAATGGTGCGGAAGTTATCTCAAGTGATGATGATGATGATGATGAAGA
TGATTATTACATGAATCGTCCACTGTCACCTATCCCCCCATCTCCAGTATCCAGAGAGTCTTCATTCCAGCAGGAGACTC
TAGTGGGCGTTGAAGTTCATACTGTGAATGGGCACCTGTACCCGAAACCGCTGACCCAGGTGCGGCCAGAGTCATGGCAG
CTCTCGAGGAGGCCTGCCGAGGAAGCACGGGGAGATCAATGGCGCTACATGAGGAGGCCCAGCGAGGACGGAACATCCGA
TGCCATGGAAGGACACGCTGACCCCAAGTTTCATCATCAGAGAGACAGCAACAA---TAAACAGCGGGAGAGCCATGCCG
ACAACAGGTTCAGCATCCCGCGGTGCGTCGAGGTGATGAACGGCATGGCGGACCTTTCGCCGGTGGACAAGTCGCTCGCC
CCAGACGTCTTCTTGGATCCAAGCAACCGGGAGATTTTCCTGTCGCTGAGTGTAGATATCCGGACCATGTGGCTGAAGCG
AAAGATGAGGAGCCTTGTGTAGAGA---ATAGTAGCACCGCCGCGGCGATTCTTTTTCTCAGTCAGGAGTAATAACACTT
GAAATAAGTAATGCGGTGTGTGCTGTAGATATCCCTAGTC-TCTTCTGATTATGAGTTATGTGTTTGATGTGTATCTAGC
ACCGACTAATCTATTTATGGTAAATCTA--------TATTGGGACCCAGCCTGTTCGCCGTGCCGCAGTAAGTTTGCCC-
-TGATCTTCGGCTAGAAATGAAGTTCTTCACCCTGCTGCTGCTGCTGCTGCTGCTGCCTGATCTCCTCTCAAGGTTCATG
TATCA----TCTGTCTGTCCGCCTTCTTCTGGAAGGGGCATCTGTCTCTGGGATGCAAGAGCCACTGATTGTACATACAG
TTTATAATGGTGATGCTCAATGATTGAGCCCTAAACTGCAACCCTGATGATGCAACCTGAAGCATGAGGTTGACAGGAAG
GAAAAGAGA----------------------------GCGCTACTAGTGAGGGTTGCAGCAGCTGAGTTGACAGCAACAG
CACCAAGACAGGTCCTTTGCTCCGGATGCTCCCTGTAGCCCAATGAGACAAACCTGGGGGCATGTGAGCCATGGGCGCCA
TGGAGGAGTGCCCCACATGGGGTGCCGGCGCCGGAAGGGACCAGCGCCTAACTGATTGGCCGTCGCCCATGGACCATTGC
CCGTGCTCTTTTTTCTTCTTCCTTGGCC----AACAGGGATGTCGACGTTCAGTAACATTTTCAACATGAGCTTCCGTTC
TA-GTAGAAGGGGAGAGTTTCTCCAGATCACTGTCCGTGGTCATCTG-------TTCTCCTTTTGAGATTTGTGCACCTT
TTCTTCCTTGGCTAACAAGGATTATCATCTTCATTGCTGATACTGGTCGAAAACCGATGTC-------------------
--------------------------------------------------------------------------------
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----------------------GGTGCTCAGGAACATTTTG-GCATGAGGTTCTGTTCTTCAAGGGGAGACATACTTGTT
CACCGCGAAAATCTGGCATAAAGTCCTTCGTTCCAAACGTGGCCTTAGTTTTTTTACCATTGTTATTAGTACCCTACTAA
TT
>chr5D_1
TGTGTCGGC-----------------------------------------------------------------------
----------------------------------------------------------------------------AACA
AACCCCATTTGCTCAGAAGCCCTGGTCACTGCAAATAGAGTGGGTGTTGCCCTGGAAGGCGTTGCAACAAGGGCCATGTT
GCAAAGCTTTTACTACATCGTAGGGGTTGCTGCGGGCTGTTCGATCAAATTTATCTGACGGCCAACGCGCTAAGAGTTAT
CAGCT-----------------GACTGTTTGTGAGTGTCTTCCTTTCTGAAATTACCATCTAAATTTGATA----CTCCC
TCCGTTCCTAAATAATATAAGTTTTTTTAGAGGTTTCAAATGGACTACAATAT--ACAGATGCACATAGACATATTTTAG
AGTGTAGATTCACTCATTTTACTCCGTATGTAGTCTTTTGTTGAAATATCT-AAAAAGACTTATATTTAGAAACGGATGG
AGTAAATAATTTAGTACGATTTATAGTGTACTACACTTTGTGCGCAATTAATAAGATCACTAATGGCCTTCTTAC-ATCC
TTGC---CGTAGAAAATCAGGAGTGAATCGGCCCGATCAAAAGAGGACCCACCGATCTGGACCCTCCAGCGGCCTGTCCC
GAATCCTAAAGCCCTCGACGCGCCGTCCGATCCACCTCCCCCTGCGCCTTCCTCTCCAATCCCACTCCGCCTCGTTCACT
CCTCCACCTCTCTCCCCCTCCCTCTCCCCC--GCCTCG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CCACCACGGCGAATCCATCGCCGCCTCCGCCGCAGCCGCCGATCGGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTCCC
CGTCCCTCCCCCGCCTCCCGCCCCAGCCCCCGCTCCCGCTCCGGCCGCTCCTGCTACCGAAGCTATGGCGCTCGTCTCCG
CGCCGGCGCCCGCCGCGGTGTGGACGGCTGTGTCGCCGCCGGCCGAGGCGAACGGGAGCTCCGACAGGAAGAAGAAGTCG
GTGCCCCCCACTTTTTACCCTTTTCGGCAAAATTTGGGTTTCGCCTCCGATTTCCTCTTTTGGTTCGTTGCGTGCTGAGT
ATTTTCTCTGGGATTCCCTCTCACTAGCCTTTCATTTTCTCTCCCGTGTTTGGTTATAGGAGGAAAGCAGAGGACGGCGA
AGGGTGCAGGACGTGCAGCTGCAAGAAGTCCAGGTGCCTGAAGCTGTAAGTTGCACGAATTTTCCACTGTCTCGCCAGTA
ATGCAAAATGCTGCAAATGTCTCATCATAGAACGCCAGAATTTAGTGAGGGGTTGAGATATATGGTGCTTCGATTCTCAG
TACATCTTCTAATTGTTTAGGATGCAATTGGCATTTTGATCCAGCACTAGTTCAGTTGCACATCTGCAATGAGTCTGGTG
CT-TTTTTTAGCAATTATAGATTGGGTGGTCGAGCATTTCAGATATTTGATGGATAACGCACCCAATGTAGCCAATCGAG
ATCCCTAAAGATATTGTGACTCTATTTGAGCATGTTTACCAGCTCTATTTGAACATGCCTACAACTTAAAAAAACACAAC
TTTATGCAAACATGTTGATTTTTTGTTTCAATTTTACGTTCACCTGTACTTACTAGTTACTGGTGCAATGTCACACACTT
GAAGCACACCTAAGATTAGTACATTGGTTGGGATTCTGGTCTAGCTGTACTCAGCCTGCGTGTTAGTGCCATGTATTGCT
TCACGGCACTCTTGCAATGGAGGGAACTGAGTTTCAGGCAGGGGGTGGTTAACTGGT-----------------------
--------------------------------------------------------------------------------
-----------------------GATGCATGGAAAAGACGGGGAATGCTAATTTTCGCACGCA------------CCCTG
CACACACAAA-CATACACCATACCTATCTAACCATGCTCATGCATTACACACAACATGATTTATGATTTCTTACTGCTAA
ATTCAAGTTCCTTCTTGTTGTACTGATCAATTGCTTTATATTGTGGCAGTTATTGCGTGTGTTTTGCTTCTGGGTCACAA
TGTTCTGAATTATGTGGCTGTGACCCATGTTATAACAAGCCTATTCATGGTGTTCAACAGAATACACCACCAGGCTTGCC
TTTGCAAGTTGTTCGACCAGCAGAGGCTGGTCAAAATTCAGCGGTATAAATCTTCTTCAAACATGACATGGTAAATGTCT
AACTATTTCCTTGTTCTATTTTTGACGATCCTGCTACTTTTTTTTATTCTCTCAAGGAATTTGCAAGATACCAAATGGAC
TTTTTTAGAAGAAAATGCACTTGCAAAAAGTCAGGCTGCCTTAAGAAATACTGTGACTGCTACCAGGTTCTGTATCCAAC
TCTATCCTATTTTTTTAAAA--GACAACTCTATCCTATTAGTTTTTCTCTTCTCTCAGCTTGTGACTGGTATTTTTTTTC
TTCTGTCTTTGAAGGGAGGGGCAGGATGCTCCATCAACTGTAAATGCGATGATTGTAAAAATCCATATGGGAAAAAAGGT
AACATAAATCTGGTGCCAACTCTTGGAACTAGTGCGTAC--TACTAGATTGCAAGATGTTAAAGTCAGTGATGTGTAAAA
TGATATGAATTCCTCAAAAA---AAAAAGATATGTGCTTATTGGGTGGATGGGTAACTGCTAATTCATGAATGGGTAGTC
ACAATATGAATGTGTTTTCAAAATTCAACTAATTATTATTATGTGTTTTTGCGTCTATGAGAACATATTTGTTTTA---T
ATTTAACATTGATTAA-AAAATCACCACAGTTAGGCAAACCATCGGTCTACACACACAAAATAG-ATTAGCTATGCTCTA
CATTCTATAGGTTGTACTCCATCTATATGGTACACATTTTGAACTATATACACTGCACAATAAGGTAAATTACTCCCAGT
TAATTTATTAGTAGTGAAGATAAGCTAACTCGGTACTTAAATCT-AAAAAGAAGAGATGGTTTAGTTTATAGGAGAATGC
TC------------------------------------------------------------------------------
-----------------------------------------------TATTATTTATATTATGTTCCTGCTTAATCATT-
GGCAGTGTTTATAACTGGCTATATGGTGTTACGGTACATTATCAATGTTTTGGTACCATAGATGACCTCAGCTTTTTACC
AC---ATACTAACTCTGGAATGCATACT---------------------------------------------GGTTAGG
ATATGTTGGAGTTCGCTTGATGAATTCTATTGCGGTACCTTTTCTTTTTACAAAGATGTTT-------GACATAATATTG
TGGATTTATTTGTTCTGTTGATTTGCTTGCTACCCCTTAATTGGAGAAGCTGACTTCATCTCAATTATGGTTATGGTTTT
TAATCTGTACTGAAAATAAAACTTTTGTTTGTTTGTGTTCTGCAGTTGGTGTTATTTTGGATGGTAAAAGTATTCTTGCC
ACACCCACACCCGGACCCACTCCGATTGAAAGGAATGGAACGGAAGTTATCTCAAGTGATGATGACGACGACGATGAAGA
TGATTATTACATGAATCGTCCACTGTCACCTATCCCCCCGTCTCCAGTATCCCGAGAGTCTTCATTCCAACAGGAGACTC
TAGTCGGCGTTGAAGTCCATACTGTGAATGGGCACCTGTACCCGAAACCGCTGACCCAGGTGCGTCCAGAGTCATGGCAG
CTCTCGAGGAGGCCTGCCGAGGAAGCACGGGGAGAACAATGGCGCTACATGAGGAGGCCCAGCGAGGACGGAACATCCGA
TGCTATGGAAGGACACGCGGACCCCAAGTTTCATCATCAGAGAGACAACAACAA---TAAACAGCGAGAGAGCCCTGCTG
ACAACAGGTTCAGCATCCCGCGGTGCATCGAGGTGATGAACGGCATGGCAGACCTCTCGCCGGTGGACAAGTCGCTCGCC
CCGGACGTCTTCTTGGATCCAAGCAACCGGGAGATTTTCCTGTCGCTGAGTGTAGATATCCGGACCATGTGGCTGAAGCG
TAAGATGAGGAGCCTTGTGTAGAGAGAGATAGTAGCACCGCCGCGGCGATTCTTTTTCTCAGTCAGGAGTAATAACACTT
GAAATAAGTAATGCGGTGTGTGCTGTAGATATCCCTAGTCTTCTTCTCATTATGAGTTATGTGTT-GATGTGTATCTAGC
ACCGACTAATCTATTTATGGTAAATCTATAAATCTGTATTGGGACCCAGCCTGTTCGCCGCG-----GTAAGTTTGCCC-
-TGATCTTCAGCTAGAAATGAAGTTCTTCACC------------CTGCTGCTGCTGCCTGGTCTGCTTTCAAGGTTCATG
TATAA----TCTGTCTGTCTGCCTTCTTCTGGAAGGGGCATCTGTCTCTGGAATGCAAGAGCCACTGATTGTACATACAG
TTAGTTGG-----TGCTCAATGATTGAGCCCTAAACTGCAACCCTGATGATGCAAGCTGAAGCATGAGGTTGACAGGAAG
GAAAAGAGATGGTGTGTGCCCTGGAAATGCACCTACAGCGCTACTAGTGAGGGTTGCAGCAGCTGAGTTGACAGTAACAG
CA-CAAGACAGGTCCTTTGCTCCGGATGCTCCGTGTAGCCCAATGAGACAAACCTGGGGGCATGTGAGCCATG-------
--GAGGAGAGCCCCAGATGGGATGCCGGCGCCGGAAGGGACCAGCGCCTAACTGATTGGCCGTCGCCCATGGACCATTGC
CCGTGCTCTTTTTCTTCCTTGGCTTAACAA-------GGATGTCGACGCTCAGTAACATTTTCGGCATGAGCTTCCGTTC
TAC----AAGGGGAGAGTTTCTCCAGATCACTGTCCGTGCTCATCTTTTCTCCTTTTTCCTTCTGAGATTTGTGCACCTT
TTCTTCCTTGGCTAACAAGGATTATCATCTTCATTGCTGATACTGGTCGAAAACCGATGTTTTTTTTAGGGAAGCAGCAG
GACTCTGCTGTGTATTTTTATTGATTTTCAAATAAATGGTACAAAAGGTCCTTGCAAAAGAAAAGAAGCTATACAGAAAA
AACACAACCTAGGAAAACTAGGAAAGCAAAGGCAAAATACAACAGCAGCAACAACAAGTGGATCATTGCATACAGGGTAA
GATTATCAGCCGGTTAACTCAAACAAAAGCCTTCACCCAGTTTTCTAATCCATGGTATTCTTTCCGCTTTGCTCTGAATG
TCAGCCACTTGATTTCCTCTTTGAATTTTCTTCTGCATGCATATAGGCTGGGTGCAATGTTTTTGAAGATGCAATCGTTG
CCCGTGGTCAAAAACCGATCTTGGTGCTCAGGAACGTCTTCAGCATGAGGTTCTGTTCTTCAAGGGGAGACATACTTGTT
TACCGCGAAAATCTGGCGTAAAGTCCTTCGTTCCAAACGTGGCCTTAG--------------------------------
--
>chr5B_5
TCGGCAACAAACCTATTGCTCAGATCTGCAAACAGAGTCGGTGTTGCGCTTGAAGCCGTTGCAACAAGGGCCACATGGCA
AAACTGGACTACATTGTATGCGTTGCTGCGGGGCGTTGCGTTTATACCTTTGCAATGTAGCCTATGTTGCATCCGCAACA
AACCTTATTTGCTCAGATCTGCAAAC----------AGAGTCGGTGTTGCGCTTGAAGCCGTTGCAACAAGGGCCACATG
GCAAAACTGG-ACTACATTGTATGAGTTGTTGCGGG-CGTTCGATCAAATTTAGATCCACCGGCCATGAAGGCAG----T
CAACT-----------------GACGGTTTCTGAGTATTTTTCTTTTCAAGATTACCATCTAAATTTGATAAATACTTCC
CCCGTTCCTA---AATATATGTCATTTTAGAGATTTTATA--ATAAGAATTACAAACAGATGTATGTAGACATATTTTAG
AGTGTACATTCACTAGTTTTGTTCCGCATGTAGTCTTAATTG-AAATCTTTAAAAAGGGCTTGTATTTAGAAACGGAGGG
AGTAATTTAG-TACTAGGAATTATAGTGTACTCCACTTTGTGCGTAAT---TAAGATCACTAATGGCCTTCTTAC-ATCC
TTGCTGCCGTAGAAAATCAGGAGTGAATCGGCCCGATCAAAAGAGGACCCACCGATCTGGACCCTCCAGCGGCCTGTCCC
GAATCCTAAAGCCCTCCACGCGCCGTCCGATCCACCTCCCCCTGCGCCTTCCTCTCCAATCCCACTCCGCCTCGTTCACT
CCTCCACCTCTCTCCCCCTCCCTCTCCCCCCCGCCTCG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CCACCACGGCGAATCCATCGCCGCCTCCGCCGCAGCCGCCGATCGGGCGGCCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT----------------------------------------------
---------------------CCCCGCTCCCGCTCCCGCCCCGGCTGCTCCTGCTACCGAAGCTATGGCGCTCGTCTCCG
CGCCCGCGCCCGCCGCGGTGTGGACGGCTGTGTCGCCGCCGGCCGAGGCGAACGGGAGCTCCGACAGGAAGAAGAAGTCG
GTGCC-CCTCCTTTTTACCCTTTTCGGCAAAATTTGGATTTCGCCCCCGATTTCCTCTTTTGGTTCGTTGCGTGCCGAGT
ATTTTCTCTGGGATTCCCTCTCACTGGCCTTTCATTTTCTCTCCCGTGTTTGGTTGTAGGAGGAAAGCGGAGGACGGGGA
AGGGTGCAGGACGTGCAGCTGCAAGAAGTCCAGGTGCCTGAAGCTGTAAGTTGCACGAATTTTCCTCTATCTCGCTAGTA
ATGCCAAATGCTGCAAATGTCACATCGAAGAACGCCAGAATTTAGTGAGGGGA-GAGATATAGCGTGCTTGGATTCTCAG
TACATCTTCTGATTGTTTAGGATGCAATTGGCATTTTGATCCGGCACTAGTTCAGTTCGACATCTGCAATGAGTCTGGTG
CT-TTTTTTAGCAATACTAGATTCTGTGCTCGGGCATTTCAGATGTTTGTTGGAAAAGGCACCCAATGTAGCCAATCGAG
ACCCCTAAAGATTTTGCGACTCTATTTGAGCATGTTTACCAGCTCTATTTGAACATGCCTACAGCTTAAAAAAACACAAC
TTTATCCAAATATGTTGAGTTGTTGTTTCGATTTTACGTTCACCTGTACTTACTAGACACTGATGCAATGTCACACACTT
GAAGCACACCTAAGATTAGTAGATTGGCTGGGATTCTGGTCTAGCTGTACACAGTCTGCGTGTTAGTGCCATGTATTGCT
TTACGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGATGCATGGAAAAGATGGGGAATGCTAATTTTCGCACGCACTGATGCACCCACCCTG
CACACACAAA-CATATACCATACCTATCTAACCACGCTCATGCATTATACACAACATGATTTATGATTTCTTACTGCTAA
ATTCAAGTTCCTTCTTGTTGTACTGATCAATTGCTTTATACTGTGGCAGTTATTGTGTGTGTTTTGCTTCTGGGTCACAA
TGTTCTGAATTATGTGGCTGTGACCCATGTTATAACAAGCCTATTCATGGTGTTCAACAGAATACACCACCAGGCTTGCC
TTTGCAAGTTGTTCGACCAGCAGAGGCTGGTCAAAATTCAACGGTATAAATCTTGTTCAAACATGACATGGTAAATGTCC
AACTATTTCCTTGTTCTATTTTTGACGATCCTGCTACTTTTTTTTATTCTCTCAAGGAATTTGCAAGATACCAAATGGAC
TTTTTTAGAAGAAAATGCACTTGCAAAAAGTCAGGCTGCCTTAAGAAATACTGTGACTGCTACCAGGTCCCGTATCCAAC
TCTATCCTATTTTTTTTTAAAGG-CAACTCTATCCTATTAGTTTTTCTCTTCTCTCAGCTTGTGACTGGTATTTTTTTTC
TTCTGTCTTTGAAGGGAGGGGCAGGATGCTCCATCAACTGTAAATGCGATGATTGTAAAAACCCATATGGGAAAAAAGGT
AACATAAATCTGGTGCCAACTCTTGGAACTAGTGAACTACGTACTAGATTGCAAGATGTTAAAGTCAGTGATGTGTACAA
TGATATGAATTCCTCAAAAAGAAAAAAAGATATGTGCTTATTGGGTGGATGGGTAACTGCTAATTCATGAATGGGTAGTC
ACAATATGAACGTGTTTTCAAAATTCAACTAATTATTATTATGTGTTTTTGTGTCTATGAGAACATATTTGTTTTA---T
ATTTAAGATTGATTAA-AAAATCACCACAGTTAGGCAAACCATCGGTCTACACACACAAAATAGTATTAGCTATGCTCTA
AATTCAATAGGTTGTACTCCATCTATATGGTACACATTTTGAACTATATACACTGCACAATAAGGTAAATTACTCCCTGT
TAATTTATTAGTAGTGAAGATAAGCTAACTCGGTACTTAAATGTAAAAAAAAAAAGATGGTTTAGTTTATAGGAGAATGG
TCTACTCCCTCCGTCTGAAAATACTTGTCATCAAAATGGACAAAAAGGGATGTATCCAGAACTAAAATACATCTAGATAC
ATCCTCTTTTATTCATTTTGAAGACAAGTATTTCCGGACGGAGGGAGTATTATTTATATTATGTTCCTGCTTAATCATTT
GGCAGTGTTTACAACTGGCTATATGGTGTTACGGTACATTATCAATGTTTTGGTACCATAGATGACCTCAGCTTTTTACC
ACAT-ATACTAACTCTGGAATGCATGCTGGTTCAGAGCCTCCAGAATAGCTT---TTTATTCTGCATATATTAGGTTAGG
ATATGTTGGAATTCGCTTGATGAATTCTATTGCGGTACCTTTTCTTTTTACAAAGATGTTT-------GACATAATATTG
TGGATTTATTTGTTCTGTTGATTTGCTTGCTACCCCTTAATTGGAGAAGCTAACTTCATCTCAATTATGGTTATGGTTTT
CAATCTGTATCGAAAATAAAACTTTTGTTTGTTTGTGTTCTGCAGTTGGTGTCATTTTGGATGGTAAAAGTATTCTTGCC
ACACCCACACCCGGACCCACTCCGATTGAAAGGAATGGAACGGAAGTTATCTCAAGTGATGATGACGACGACGATGAAGA
TGATTATTACATGAATCGTCCACTGTCCCCTATCCCCCCGTCTCCAGTATCCCGAGAGTCTTCATTCCAACAGGAGACTC
TAGTGGGCGTTGAAGTTCACACTGTGAATGGGCACCTGTACCCGAAACCGCTGACCCAGGTGCGTCCAGAGACATGGCAG
CTCTCGAGGAGGCCTGCCGAGGAAGCACGGGGAGAACAATGGCGCTACATGAGGAGGCCCAGCGAGGACGGAACATCCGA
TGCTATGGAAGGACACGCAGACCCCAAGTTTCATCATCAGAGAGACAACAACAACAGTAAACAGCGAGAGAGCCCTGCTG
ACAACAGGTTCAGCATCCCGCGGTGCATTGAGGTGATGAACGGCATGGCGGACCTCTCGCCGGTGGACAAGTCGCTCGCC
CCGGACGTCTTCTTGGATCCAAGCAACCGGGAGATTTTCCTGTCGCTGAGTGTAGATATCCGGACCATGTGGCTGAAGCG
TAAGATGAGGAGCCTTGTGTAGAGA---ATAGTAGCACCGCCGCGGCGATTCTTTTTCTCAGTCAGGAGTAATAACACTT
GAAATAAGTAATGCGGTGTG--CTGTAGATATCCCTAGTCTTCTTCTCGTTATGAGTTATGTGTT-GATGTGTATCTAGC
ACCGACTAATCTATTTATGGTAAATCTA--------TATTGGGACCCAGCCTGTTCGCCGCGCCGCAGTAAGTTCGTCGT
GTGATCTTCAGCTAGAAATGAAGTTCTTCACC------------CTGCTGCTGCTGCCTGGTCTGCTTTCAAGGTTCATG
TATCATCTGTCTGTCTGTCTGCCTTCTTCTGGAAGGGGCATCTGTCCCTGGGATGCAAGAGCCACTGATTGTACATACAG
TTTATAATGGTGATGCTC-ATGATTGAGCCCTAAACTGCAACCCTGATGGTGCAAGCTGCAGCATGAGGTTGACAGGAAG
GAAAAGAGTCTCCTATA----------------------------AGTGAGGGTTGCAGCAGCTGAGTTGACAGTAACAG
CA-CAAGACAGGTCCTTTGCTCCGGATGCTTCCTGTAGCCCAATGAGACAAAACTGGGGGCATGTGAGCCATGGGCGCCA
TGGAGGAGTGCCCCAGATGGGGTGCCGGCGCCGGAAGGGACCAGCGCCCAACTGATTGGCCGTCGCCCATGGACCATTGC
CCGTGCTCTTTTTCTTCCTTGGCTTAACAGTTAACAGGGATGTCGACGTTCAGTAGCATTCTAGGCATGAGCTTCGGTTC
TACGTAGAAGGGGAGAGTTTCTCCAGATCACTGTCCGTGCTCATCTTTTCTACTTTTTCCTTCTGAGATTTGTGCACCTT
TTCTTCCTTGGCTAACAAGGATTATCATCTTCATTGCCGATACTGG----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-------------------------S---S----------------------------------
SS------------------------------S--S-------------S---------S--------------------
----SSSSSSSSSSSSSSSSSS--------S----------------S-----------S------S-------------
-------------------S-S-------------------S-------S-----S-S---------------S------
------S---S-S------------S---S-----------S----------------------------S---------
---------------------------------------------------------------------S-----S----
---------------------------S----------------------------------------------S-----
--------------S-----------------------------------------------------------------
--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS-S-S-S-SS--S----SSS---S--S-S-S---SS----SSSSSS-S-S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S--------------------S-------------------------
--------------------------------------------------------------------------------
----------------------------------S----------------------------------------S----
------------------------S-------------------------------------------------------
---------------------------------------------------S------S-----------------S---
------------------------------------S----------------------------S--------------
-S------------------------------S-----------------------------------------------
--S-----------S-----------------------------------------------------------------
------------------------------------------------------------------------------S-
---------S--------------------------------------------S-------S-----------------
--------SS---S----------------S--------------------S----------------SS-S-SS-SS-S
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S-S---S---S--------------------
----------S-------------------S--------------SS---------------------------------
----------S--SS------------------------S-SS------------------------------------S
---------------------------------------S----------------------------------------
--------------------------S---------------------------------------------------S-
-S-------------------------------S-----S-S--S-------------------------------S--S
--------------------------------------------------------------S--------S--------
---------------S-----S------S-----------------------------S---------------------
------S---------------S---------------------------------------------------------
-----------S----------------------------------S-----------------------S---------
-------SSS--------------------------------S---------------S-----------------S---
----------------S-----S-------------------------------------------S---------SSS-
----------------S----S-----------S--------S-----------S-SSS---------S-----S-----
-----------------------------------S--S-----------------------------------------
---------------------------------S-----------------S-SSS-----------------------S
--------------------------------------------------------------------------------
---------------------------------------------------------------------------SS---
-------------------S------------------------------------------------------------
--S-S------------------------------S----S-----------SSS-------------------------
-------------S-------------------S------------S------------S-SSSSSSS------------
S----------S-----S------------------S----S--------------S------S----SS--S-S-S-S-
SS-S------------SSS--S-----------SS----S----------------------------------------
S----------SSSS--S-S------------------SS-------------------------S--S--S--------
---------------------------------------S------------S----------------S----------
----------------------------------------------------------------S---------------
-----------------------------------S--------------------------------------------
---S--------------S----------------------------S------------------S-------S---S-
--------------------------S----------------------------S------------------------
--S-----------------------------------------------------------------------------
S-------------------------------------------------------------------------------
-----------------------------------------------S-----------------S--------------
------------------------------------------------------------S-------------------
---------S----------------------SSSSSSSSSSSS----------------S---S--S------------
-------------------S------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------S-----
--S-----------------------------------------------------------------------------
---------------S----------------------------------------------------------------
-------------SS-S---SSS-SSS------------------------------------SS---------------
---------------------------------------S------S---------S-----S-----------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-S--S---------------------------------------
S----------------S------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS
>forward_735
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------GTCCC
GAATCCTAAAGCCCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--
>reverse_2591
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------TCCACGCTCATGCATACCC-------------------------------
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--
>forward_1812
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------AGGTGCCTGAAGCTGTAAGTC----------------------------
--------------------------------------------------------------------------------
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--
>reverse_3474
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---------------------------------TGCAAACCACCGGTCTACAC---------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--
>forward_2827
--------------------------------------------------------------------------------
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-------GTTGTTCGACCAGCAGAGGG-----------------------------------------------------
--------------------------------------------------------------------------------
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--
>reverse_4667
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--------------------------GTCGAGGTGATGAACGGCAT----------------------------------
--------------------------------------------------------------------------------
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--
>forward_3860
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GGCAGTGTTTACAACTGGCC------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>reverse_5547
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------CCAACAGGGATGTCGACGTT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
