>input_sequence_25230
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-----------------------ATGGCCCTCTCCTCGCGCGCCGCCGCTTTCCCGCACGTCTCCCTCCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCTCCCCTCCCCCCGCCCGCGCCCGGCC
GCCGTGTCGCTCCGGCCCCCGCCTCCCCCGCGCTCGGTGCGGCTCGACCACGTCATCCCCGCCGACGCCGCCGAGCTCGG
CCTCGCCGGCGGCGGGCTCCTGGCCGCCGCCATCGAGCACCTCGAGCGGGAGCCCGCCGCCGCGGCCGACGACAAGGCCC
CGCTCGCCGACCTCTCCCCGAGGGAGCTCCAGCTCGTGCTCGTCTACTTCGCGCAGGAGGGCCGCGACGCCTACTGCGCG
CTCGAGGTCTTCGACTGGCTGCGCCGCGCCGACCGCGTCGATGGCGAGACCATGGAGCTCATGACAGCCATCGCCTGCGG
CTGGATCGAGCGCCTCGTGGGGGCCGGGGGTGACGTCTCCGACGTCTCCGCGCTCCTGGGGGAGATGGACTGCGTCGGCC
TCCGCCCCGGGTTTAGCCTCGTCGAGAAGGCCGTCGCGCTCTACTGGGACCGCAGCGAGAGGGCGCGCGCTGTTGAGTTC
GTCAGGGACGTGCTCAGGAGGGGGGGCGTGGCCGCGGGAGGGGAGTATGACGGCGAGCGTGGAGGCCCCGTCGGTTACCT
CGCCTGGAAGATTATGGTAATCGGCTTTATCTATTCCCCTGCAATTTTACCAT------GTCCTGTGCTTGCTTGTACCT
ATCGTTTATGCACAATTGCTTGTTGAG--------GCCTCTTAATTGTTCATATCTTTGCTAAACAAATTGTTCACATCC
TGGCTACGGTTGGAAATAGTTTTTTTTAACTGGCATCGGAGGGGAGAGGCTCCCCACCTTAACATCTCATTT--------
TACAAAAGAGAATTGATCCAGTTTATAAGGGAAACCGGGTC-AAAAACCTACAGTTGGAAATGGCAATTTCATGATTCTC
GGAACTGCCTGTTGAAAACCAAC---------------------------------------------------------
-------------------------------------------------------CTTCAGTTCTGGATTTTGACATGAT
CTGAAACCTTTTTTTT--ATGTTTCTAGTTTCACTTGTTCTATGTGTGATGGTACCTTTCGTGTTGGATAGGTTGTTGGG
ATGACAGCTGTCTTGTCTTCATTAGTTATGACACGCATGTATATTACTTTAAGATGATCATCATTGATTCTGCTTGTAGA
TTTATTCATATCGTGACAATCACGTTCTTATTGTATCTTGTTAGGATAACATGCCTTTG-TTATTACATTATGAGCACAT
GGTTCAGTCAATAAACTAAGGCCTGACTCCCATGCTGATCACATGTTTGCGTATAAAGTTGTTATTTTGTTTCCTGGTTT
ATATTCGATCATTACACTTATTATCATAATTTTTAGCATTGAAGTTTTCAGTTGCAAATCACCACCAAATCTATAAGAGG
TCAACTATTATCATATGAAGAAGCACCACGGCTTGTTGCTCCAAAACATTTACCAAGGG-TAGTCATGTCATTTATTTGT
TCTGTAGTTGCCAATTGATTTTTA-TTTATTTATGGTCCTTATCCTAAACCTATGTGCTTCTGTTAGCAACATACAGTAC
AAGCCAAAGACTATCATAAACATTTTGATACTGGAGTAGTACATAGTTAGCATA-TTTTGTTATGTTTTGACTTTTATCT
TGGTATATGATGAGTCTCTAGTATTTCAGAATTAGCGAGTATGTTTTGGTTTGGATAGCTTTGAACTATGGTA-TGGTGC
GCGTAAATTAAATTGTATTGATGCAGTGATTTCTACTATAAGTCTTAGGGATCATTTTTACCCACTTACCACACATCCAT
TTCTTTTGTCTAGAAACTGTGTGATAACTTTAAGCACTCAACATATCCGCTGCTTATAAACTCTGTTCCATGCTCTTTCT
GTCTCTGATACCAATCTCATATATCTCAGCTCCAGTTTTCTTAATGTTCTGTGTTACTTTTGTTTTGATAGATGGACGGA
GACTACAGAGATGCTGTTAAATTGGTCATTGAATTCAAAGAGAGTGGACTGAAACCTGAAGTCTATAGTTATCTTATTGG
GTTGACTGCCTTGGTTAAAGAGCAAAAAGAATTCTCAAAGGCATTGCGTAAATTGAATCTGTCAGTGAAGGATGGCTCAA
TTGCCAAACTGGATACTGAGAGCATGCACAACATCGAGAAGTATCAATCCAAATTATTAGGGGATGGTGTTCTTTTATCA
AATTGGGCAGTTCAGGAAGGCAGCAGTGAGGTTCTAGGACTTGTGCACGAGAGGCTCCTTTCATTGTACACTTGCGCTGG
TTGTGGCTTAGAAGCTGAGCACCAACTTTGGGAATTGAAGCTTGTTGGTAGGGAACCTGATACACAGCTCTATGATGTTG
TCTTGGCCATTTGTGCTTCTCAAGGGGAAGCTCCTGCTGTTAGACGATTGCTTGCAGGAGTCGAGTCAACCAGTGCAGGA
AGAAGGAAGAAGTCTATGTCATGGCTCCTGCGAGGCTACCTTAAAGGTGGTTTCTATCTGGATGCCTCGGAAACACTTTT
GCGGATGCTTGATATGGGCTTATCTCCTGATTACCTGGACAGAGCGGCTGTACTGACTGCACTGCAGAGAAACATACAGG
AATCTGGCAACCTAGAATCGTACATGAAACTCTGCAAGCGCCTATCTGAGACAGATCTGATCGCACCGTGCGTCCTATAT
CTGTATGTACGCAAATTCAAGCTGTGGATGATGCGCATGCTGTGA-----------------------------------
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>chr1D_1_TraesCS1D01G224500
CATACAAGGGTGGTGTGAGCTCAGAGTTGTTATCTGCGGACTAGGTGTCGTCTCTAAGCTCCATCATTGTTTTCCTCCAT
TGTTGCTTTGTCAT-AGCAGTCTCACCGTGCATTTGCTTCTCCTCGCGTGTAGGTTCCCTTTTAGTGCCCAGGTTTCCCT
TTGTTGAGCTCAGCGCTACATGTTGGTGGTGCTTTGGTTTGGTCTTCTAGGTGGCAGTGGCGTCGGGTGTACACCTTAGC
TTTTGGGTAAGCATCAGTATCTTCCGACGAATTAGCTCCTCGTGATGGGCGAGGGGGCAGGGAGCCCCTTTCGGAGATGG
AGGAGGTCGTATCTGAATCGGCCGGAGCCCGTAGAGGTGACAAAGTGTTACTCTCACCTGCTAGTTGTGTCTCCTCAAGG
CCTTGCTGGTGTCTCTTCATGGTGGCCT----------------------------------------------------
-----------------------------GCTTGCTAGCTGTTTGCAGAGCATTGTCTATCTTTTAGTTGTTTCATTTTT
TGTTCTTGTAAGTTTGATGGATGATGTAATCTTGGACAATTGATGGCTTTGTTAATTCAAATCAGACTTGACTTGAGCCT
TCAATCTAAAAAATCATTGGCT--CCCTAATCCATTCAACACCGCGGAGATCCCCCGGGCATACGAGCAATTCCGTCTTC
TTCACCATGAAACATGCTTGCAAGATCCAAGAGATAATAAAAC-ATGCATG-----------CTTTATTTTGGTCTGAAG
AAGATCATAAGTTGGATAGACAATAATTGTGCTCTCAAGTTTTCGAAAAAGAA---------------------------
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-------------------------------------AGA--------GATAAATGAACACTAGAAAAAAATAGAAGTTA
-AAAAAAGAACACTGCGAAAAGATCACTCAAACCAGTGGTGGTGATTCCGGCAGCCGTTTCCGCCTCCCCGTCTCCATCA
TGCGACGCCGCTGGTCATCCATCGACTGGCCTCTGGCCCACGCATTCATTCA----------------------------
-------------------TCAACCACGTCTCCCCTTCTCCTCCTCTCCTC-------CCTCTCCCGAGCCCCCGCTCCA
TGCCCTCCCGCCCCTAACCACCCATGGCCCTCTCCTCGCGCGCCGCCGCTTTCCCGCACGTCTCCCTCCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCTCCCCTCCCCCCGCCCGCGCCCGGCC
GCCGTGTCGCTCCGGCCCCCGCCTCCCCCGCGCTCGGTGCGGCTCGACCACGTCATCCCCGCCGACGCCGCCGAGCTCGG
CCTCGCCGGCGGCGGGCTCCTGGCCGCCGCCATCGAGCACCTCGAGCGGGAGCCCGCCGCCGCGGCCGACGACAAGGCCC
CGCTCGCCGACCTCTCCCCGAGGGAGCTCCAGCTCGTGCTCGTCTACTTCGCGCAGGAGGGCCGCGACGCCTACTGCGCG
CTCGAGGTCTTCGACTGGCTGCGCCGCGCCGACCGCGTCGATGGCGAGACCATGGAGCTCATGACAGCCATCGCCTGCGG
CTGGATCGAGCGCCTCGTGGGGGCCGGGGGTGACGTCTCCGACGTCTCCGCGCTCCTGGGGGAGATGGACTGCGTCGGCC
TCCGCCCCGGGTTTAGCCTCGTCGAGAAGGCCGTCGCGCTCTACTGGGACCGCAGCGAGAGGGCGCGCGCTGTTGAGTTC
GTCAGGGACGTGCTCAGGAGGGGGGGCGTGGCCGCGGGAGGGGAGTATGACGGCGAGCGTGGAGGCCCCGTCGGTTACCT
CGCCTGGAAGATTATGGTAATCGGCTTTATCTATTCCCCTGCAATTTTACCAT------GTCCTGTGCTTGCTTGTACCT
ATCGTTTATGCACAATTGCTTGTTGAG--------GCCTCTTAATTGTTCATATCTTTGCTAAACAAATTGTTCACATCC
TGGCTACGGTTGGAAATAGTTTTTTTTAACTGGCATCGGAGGGGAGAGGCTCCCCACCTTAACATCTCATTT--------
TACAAAAGAGAATTGATCCAGTTTATAAGGGAAACCGGGTC-AAAAACCTACAGTTGGAAATGGCAATTTCATGATTCTC
GGAACTGCCTGTTGAAAACCAAC---------------------------------------------------------
-------------------------------------------------------CTTCAGTTCTGGATTTTGACATGAT
CTGAAACCTTTTTTTT--ATGTTTCTAGTTTCACTTGTTCTATGTGTGATGGTACCTTTCGTGTTGGATAGGTTGTTGGG
ATGACAGCTGTCTTGTCTTCATTAGTTATGACACGCATGTATATTACTTTAAGATGATCATCATTGATTCTGCTTGTAGA
TTTATTCATATCGTGACAATCACGTTCTTATTGTATCTTGTTAGGATAACATGCCTTTG-TTATTACATTATGAGCACAT
GGTTCAGTCAATAAACTAAGGCCTGACTCCCATGCTGATCACATGTTTGCGTATAAAGTTGTTATTTTGTTTCCTGGTTT
ATATTCGATCATTACACTTATTATCATAATTTTTAGCATTGAAGTTTTCAGTTGCAAATCACCACCAAATCTATAAGAGG
TCAACTATTATCATATGAAGAAGCACCACGGCTTGTTGCTCCAAAACATTTACCAAGGG-TAGTCATGTCATTTATTTGT
TCTGTAGTTGCCAATTGATTTTTA-TTTATTTATGGTCCTTATCCTAAACCTATGTGCTTCTGTTAGCAACATACAGTAC
AAGCCAAAGACTATCATAAACATTTTGATACTGGAGTAGTACATAGTTAGCATA-TTTTGTTATGTTTTGACTTTTATCT
TGGTATATGATGAGTCTCTAGTATTTCAGAATTAGCGAGTATGTTTTGGTTTGGATAGCTTTGAACTATGGTA-TGGTGC
GCGTAAATTAAATTGTATTGATGCAGTGATTTCTACTATAAGTCTTAGGGATCATTTTTACCCACTTACCACACATCCAT
TTCTTTTGTCTAGAAACTGTGTGATAACTTTAAGCACTCAACATATCCGCTGCTTATAAACTCTGTTCCATGCTCTTTCT
GTCTCTGATACCAATCTCATATATCTCAGCTCCAGTTTTCTTAATGTTCTGTGTTACTTTTGTTTTGATAGATGGACGGA
GACTACAGAGATGCTGTTAAATTGGTCATTGAATTCAAAGAGAGTGGACTGAAACCTGAAGTCTATAGTTATCTTATTGG
GTTGACTGCCTTGGTTAAAGAGCAAAAAGAATTCTCAAAGGCATTGCGTAAATTGAATCTGTCAGTGAAGGATGGCTCAA
TTGCCAAACTGGATACTGAGAGCATGCACAACATCGAGAAGTATCAATCCAAATTATTAGGGGATGGTGTTCTTTTATCA
AATTGGGCAGTTCAGGAAGGCAGCAGTGAGGTTCTAGGACTTGTGCACGAGAGGCTCCTTTCATTGTACACTTGCGCTGG
TTGTGGCTTAGAAGCTGAGCACCAACTTTGGGAATTGAAGCTTGTTGGTAGGGAACCTGATACACAGCTCTATGATGTTG
TCTTGGCCATTTGTGCTTCTCAAGGGGAAGCTCCTGCTGTTAGACGATTGCTTGCAGGAGTCGAGTCAACCAGTGCAGGA
AGAAGGAAGAAGTCTATGTCATGGCTCCTGCGAGGCTACCTTAAAGGTGGTTTCTATCTGGATGCCTCGGAAACACTTTT
GCGGATGCTTGATATGGGCTTATCTCCTGATTACCTGGACAGAGCGGCTGTACTGACTGCACTGCAGAGAAACATACAGG
AATCTGGCAACCTAGAATCGTACATGAAACTCTGCAAGCGCCTATCTGAGACAGATCTGATCGCACCGTGCGTCCTATAT
CTGTATGTACGCAAATTCAAGCTGTGGATGATGCGCATGCTGTGAGGGTCTCGACAAAGCCTTGAATCATCTGTGGGTGC
TTCAGACGTGTTCATGGCTTTGATTAGGTGTAGAATGCCCCGACTACGGTGAACCAACTGATGCACAATCATGGTTCCTT
GTATATTTTTTACCGGAAAGGAGCTCCACATGAGCGTTCACCCCCATCAGAGCTGCTGTCTTATTGTCTAAGCAGACTAC
ATGAGTGTAAATTTTCAGTGTACCATCCCCAGTTGTGTGGAATGGAGGGCGCTAGCTGCTGTAGGGGAGCATATACCTCT
TACGAAACATTACGTGTATATAGTTGAA-AAAAACAAACTTGTAAAGTTGTGATATACTCCCTCCGTTCCAAAATAGATG
ACCCAACTTTATACTAATTTTGTACATAAAGTTAGTATAAAGTTGGGTCATCTATTTTGGAACGGAGGGAGTACCTCAGT
TGTCTTCGTAATCTTGTATGTAGCCCTTCTCTGTTTTTGTTGATCCTGCTGTACCTTTTGAACATGAAATCATTGAAACT
GGGTGCCTCTTTTA-GGCCTAAACAGTTGCTGGAAGTTATTTGAGATGAAGAACAAATCTCTGTTGCCTTTTCAAAGGTC
CACTAGGGTAGGAATCTGACTGGCAGAGATTCTG----------------------------------------------
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----TTGCTCAAGTTACTTCTGCTACTCTGTTTGCTAC-AAAACT-----TGCTACCGTTACTATTGTTATCACTGCTAT
CATATTACTGTACTACTAATAAATTATTGCAAGGAAGTGATTCTCAGGTGTGGTTGAATTGACAACTCAACTGCTAAGGC
TTATAAATATTCTTTGGCTCCCTTTTGGTCGAATCAATAAATCTGGATGAAATAC---CCTCGAAGACTGTTCTGATCCC
ATATACTTGTGGGTCATCATTCGCACGCTTAAGGGTCATCGATCAGTTGAGTGCCAGATGGGTTAGGAGCTTGAGAGAAA
AATCATCGAAAAAGTTTTGGAGATGTTAAAAGCATTTCGGAGAGGGAACCAAAAGTGCTTCGGAGA
>chr1A_1
CATATAGGGGTGGCATGAACTCGAAGCTGTTATTTGTGGACTAGATGTCTTTTCTAAGTTCTGTCATAGTATTCCTCCAT
TGTTTATTTGTCATCAGCAGTCTCGCCATGCATTTGCTTCTCCTCGTGTGTAGGTTCCCTTTTAGTGCCCAGGTTTACCT
TTGTTGAGCTCAACGGGGCATGTTGTTGGTGCTTTGGTTTGGTCTTCCAGGTGGCAAT-GCGTCGGTTGTACACC---GC
TCTTGGGCGAGGGTATGTATCTTCCATTGGATCGACACCTCGTGCCGGGCGAGGGGGTAGGGAGCCCATTTCGAAGA-GG
AGGAGGTCGTAACCGAATCAGCCGGAGCCCATGCAACTGACGAAGTGTTACTCTCACCTGCTAGTTGTGTCCCCTCAAAG
CCTCGTTGGTGTGTCTGCGTCGTGGCCTGCTCTTGGTGAAGGGCTTCATTGATTTCAAACTGTTTTTGTGCCTTAGACTC
TTCATGTTTTCCCTGTAGGGTTGCATGAAGCTTGCTAGCCGTTTGCAAAGCACTATCTATCTTTCACCTCTTTTGTTTTT
TGTTCTTATAAGTTTGGTGGATTGTGTAATCCTGGCCGGTACAACGCCGAT---------------CTCGACTTAGGCCT
TAGTTCTAAAAAAACATTGCAT--CACCACA---------------GAGATACTCTGGGCATACGAGCAATTCCGTCTTC
TTCAGCATGAAACATGCATGCAAGATCCAAGAGATAATAAAAATATGCATG-----------CTTTATTTTGGTCTAAAG
AGGAGCATAAGTTGGCTAGACAATAATTGTGCTCTCAAGATTTTGAGAAAGAGCGAATCAACCTGTGGTTGAGTTGGTTA
GGTGGACAGTGGTATTCCCAACCCACCAGGGTTCAAATCCTGGTGCTCGCATTATTTTTGGATTTATTTCAGGATTTTCG
GCGACACACTTTCAGTGGGAAGAGACGTTCCAGTCGACGACTACGGTGACTTCGTAAATCTCAAGATGATATGCCGGCTC
AGTCTCCCGGAGGTGCTCATAGGGGTAGGGTGTGCGTGTGTGCGTTCATAGGGGTAAGTGTATGCGCGTGTATATGAGCG
CTTGTGTCTGTACTGATGCTAAAAAAAAAAGATTTTGAGAAAGAAAGAGTTAAATGAACACTAGAAAAAGAAGCCGAAGA
TAAAAAAGAACACTACGAAAAGATCACTCAAACCAGTGGTGGTGATTCCGGCAGCCGTTTCCGCCTCCCCATCTCCATCA
CGCGACGTCGCTGGTCATCCATCGACTGC-------CCCACGCATTCATTCATTCCCAGTTACAATCACCATCCCGTTTC
C-TCCCCCCCTCTCTCGGTTCAACCACGTCTCCCCTTCTCCTCCTCTCCTCTTCCCCCCCTCTCCCGAGCCCCCGCTCCA
TGCCCTCCCGCCCGTAACCACCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNN----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CATCCCCGCCGACGCCGCCGAGCTCGG
CCTCGCCGGCGGCGGGCTCCTGGCCGCCGCCATCGAGCACCTCGAGCGGGAGCCCGCCGCGGCGGCCGACGACAAGGCCC
CGCTCGCCGACCTCTCCCCGAGGGAGCTCCAGCTCGTGCTCGTCTACTTCGCGCAGGAGGGCCGCGACGCCTACTGCGCG
CTCGAGGTCTTCGACTGGCTGCGCCGCGCCGACCGCGTCGACGGAGAGACCATGGAGCTCATGACGGCCATCGCCTGCGG
CTGGATCGAGCGCCTCGTGGGGGCCGGGGGTGACGTCTCCGACGTCTCCGCGCTCCTGGGGGAGATGGACTGCGTCGGCC
TCCGCCCCGGGTTTAGCCTCGTCGAGAAGGCCGTCGCGCTCTACTGGGACCGCAGCGAGAGGGCGCGCGCTGTTGAGTTC
GTCAGGGACGTGCTCAGGAGGGGGAGCGTGGCCGCGGGAGGGGAGTACGACGGCGAGCGTGGAGGCCCCGTCGGTTACCT
CGCCTGGAAGATTATGGTAATCGGCTTCATCTATTCCCCTGCAATTTTACCCATGTCAGGTCCTGTGCTTGCTTGTACCT
ATAGTTTACGCACAATTGATTGTTGAGGGCTTGATGCCTCTTAATTGTTCATATCTTTGCTAAACAAATTGTTCATATCC
TGGCTACGGTTGGAAATAGTTTTTTTTAACTGGCACCGGAGGGGAGAGGCTCCCCTCCTAAACGTCTCATTTCTAGATTT
TAGAAAAGAGAATTGATCCGGTTTATAAGGGAAACCGGGTA-AAAAACCTACGGTTGGAAATGTTAATTTCATGATTCTC
GGAACTGCCTGTTGAAAACCAATCTTCAGTAGAACCTTTTTTATTTTCTTTGCTGTACATAACTTTGCTTTCTTTTGAAT
GAAATTTACCGTAGAACGATTGTTCTACGGTTTTTGGTTCAAAAAAAAAACCAATCTTCAGTTCTGGATTTTGACATGAT
CTGAAACCTTTTTTTT--ATGTTTCTAGTTTCACTTGTTCTATGTGTGATGGTACCTTTCGTGTTGGATAGGTTGTTGGG
GTGACAGCTGTCTTATCTTCATTAGATATGACACACATGTATATTACTTTAAGATGATCATCATTGATTCTGCTTGTAGA
TTTATTCATCTCGTGACAATCACGTTCTTATTGTATCTTGTTAGGATAACATGCCTTTGATTATTGCATTGTAAGCACAT
GGTTCAGTCAATAAACTAAGGCCTGACTCCCATGCTGATCACATGTTTGCGTATAAAGTTGTTATTTTGTTTCCTGGTTT
ATATTCCATCATTACACTTATTATCATCATTTTTAGCATGGAAAATTTCAGTTGCAAATCACCACCAAATCTATAAGAGG
TCAACTATTATCATATGAAGAAGCACCACGGCTTGTTGCTCCAAAACATTTACCAAGGGGTAGTCATGTCATTTATTTGT
TCTGTAGTTGCCAATTGATTTTTGTTTTATTTATGGTCCTTATCCTAAACCTATGTCCTTCTGTTAGCAACATACAGTAC
AAGCCAAAGACTATCATAAACATTTTGATACTGGAGTAGTACATAGTTAGCATA-TTTTGTTATGTTTTGACTTTTATCT
TGGTATATGATGAGTCTCTAGTATTTTAGAATTAGCGAGTATGTTTTGGTTTGGATAGCTTTGAACTATGGTATTGGTGC
GCGTAAATCAAATTGTATTTATGCAGTGATTTCTACTAGAAGTCTTAGGGATCATTTTTACCCACTTACCACACATTCAT
TTCTTTTGTCTAGAAACTGTGTGATAACTTTAAGCACTCAACATATCCGCTGCTTATAAACACCGTTCCATGCTCTTTCT
GTCTCTGATACCAATCTCATATATCTTAGCTCCAGTTTTTTTAATGTTCTGTGTTACTTTTGTTTTCATAGATGGACGGG
GACTACAGAGATGCTGTTAAATTGGTCATTGAATTCAAAGAGAGTGGACTGAAACCTGAAGTCTATAGTTATCTTATTGG
GTTGACTGCCTTGGTTAAAGAGCAAAAGGAATTCTCAAAGGCATTGCGTAAATTGAATCTGTCAGTGAAGGATGGCTCAA
TTGCCAAACTGGATACTGAGAGCATGCACAACATCGAGAAGTATCAATCCAAATTATTAGGGGATGGTGTTCTTTTATCA
AATTGGGCAGTTCAGGAAGGCAGCAGTGAGGTTCTAGGACTTGTGCATGAGAGGCTCCTTTCATTGTACACTTGTGCTGG
TTGTGGCTTAGAAGCTGAGCGCCAACTTTGGGAATTGAAGCTTGTTGGTAGGGAACCTGATACACAGCTCTATGATGTTG
TCTTGGCCATTTGTGCTTCTCAAGGGGAAGCTGCTGCTGTTAGACGATTGCTTGCAGGAGTCGAGTCAACCAGCGCAGGA
AGAAGGAAGAAGTCTATGTCATGGCTCCTGCGAGGCTACCTTAAAGGTGGTTTCTATCTGGATGCCTCGGAAACACTTTT
GCGGATGCTTGATATGGGCTTATCTCCTGATTACCTGGACAGAGCGGCTGTACTGACTGCACTGCAGAGAAACATACAGG
AATCCGGCAACCTAGAATCATACATGAAACTCTGCAAGCGCCTATCTGAGACAGATCTGATTGCACCGTGCGTCCTATAT
CTGTATGTACGCAAATTCAAGCTGTGGATGATGCGCATGCTGTGAGGGTCTCGACAAAGCCTTGAATCATCTGTGGGTGC
TTCAGACATGTTCATGGCTTCGATTAGGTGTAGAATGCCCCGACTACGGTGAACCAACTGATGCACAATCATGGTTCCTT
GTATATTTTTGACCGGAAAGGAGCTCCCCATGAGTGTTCACCCCCATCAGAGCTGCTGTCTTGTTGTCTGAGCAGACTAA
ATGAGTGTAAATTTTCTGTGTACCATCCCCAATTGTGTGGAATGGAGGGCGCTAGCTGCTGTAGGGGAGCATATACCTCT
TACGAAACATTACGTGTATATAGTTGAACAAAAAGAAACTTGTAAAGTTGTGATATAC----------------------
--------------------------------------------------------------------------CTCAGT
TGTCTTGGTAATCTTGTATGTAGCCCTTCTCTGTTTTTGTTGATCCTGCTGTACCTTTTGAACATGAAATCATTGAAATT
GGGTGCCTCTTTTATGGCCTAAACAGTTGCAGGAG--TATTTGAGATGAAGAACAAATCTCTGTTGCCTTTTCAAAGGTC
CACTAGGGTAGGAATCTGACTGCAGAGATTT-TG----------------------------------------------
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----TTGCTCAAGTTACTACTGCTACTCTGTTTGCTAC-AAAACTGCTACTGTTACTGTTACTATTGTTATCACTGCTAT
CATATTACTGTACTATTAATAAATTGCTGCAAGGAAGTGATTCTCAGGTGTGGTTGAGTTGACAACTCAACTGCTAAGGC
----------------GCTCCCCTTTAGTCGAATCAATAAATTTGGATGAAATAC---CCTCAAAGACTGTTGTGATCCC
ATATACTTGTGGGTCATCATTCGCACGCTTAAGGATCGTCGATTTGTTGAGTACCAGATGGGTTAGGAGCTTGAGAGAAA
AATCACCGAGAAAGTTTTGGAGATGTTAAAAGCATTTCGGAGAGGGAACCATAAGTACTTCGGAGA
>chr1B_16
TGAGATAGAG---------------GTTGTTATTTGCGGACTAGGTGTCTTTTCGAAGCTCTGTCATTGTATTCCTCCAT
TGTTTCTTTGTCATTATCAGTCTCGCCATGCATTTGCTTCTCCTTGCGTGTAGGTTCCCTTTTAGGGCCCAGGTTTACCT
TTGTTGAGCTTAGTGGTGCATGTTGGTGGTGCTCTGATTTGGTCTTCCAGGTGACAAT-GCGTCGGTTTTACACTTTAGC
TCTTGGGTGAGGGTCTGTATCTTCCGCCGGATCGGTGCCTCATGTCGGGCGAGGGGGCAGGGAGCCCCTTTCGGAGA-GG
AGGAGGCCGTAACCGAATAGGCCAGAGCCCATGCAACCGACAAAGTGTTACTCTCACCTGCTAGTTGTGTCTCCTCAAGG
CCTTGCTGGTGTGTTTGTGTCGTGGCCTGCTCTCGGTGGAGGGCTTCATTGACTTCAAGCTGTTTTTATGCCTTAGACTC
TCCATTTTTGCTTGTA--GGTTGTATGAAGCTTGCTGGCCATTTGCAAAGCAATGTCTATCTTTAACCTGTTTTTTTTTT
CGTTCTTGTAAGTATGA-------TGTAATCCTGGCTGGAACAACGCCGGG---------------CTTGACTTGAGCCT
TCGTTCTAAAAAAAACTTTGGCCCCCCTAATCCATTCAACACTGTGGAGATCCTTCGGACATACGAGTAATTCCATCTTC
TTCACGATGAAA------------------------ATAAAGC-ATGCATATTTTTATTGTCCTTAATTTTGGTCTAAAG
AAGATCATAAGTTGGCTAGACAATAATTGTGCTCTCAAGTTTTCGGAAAAGAA---------------------------
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-------------------------------------AGACTGAAAGAGATAAATGAACACTAGGGAAAAAGTCGAAGTT
A----------------------------AAACCAGTGGTGGTGATTCCGGCAGCCGTTTCCGCCTCCCCGTCTCCATCA
CGCGACGCCGCTGGTCATCCATCGACTGC-------CCCACGCATTCATTCATTCCGAGTTACCATCACCATCCCGTTTC
CTTCCCCCCCTCTCTCGGTTCAACCACGTCTCCCCTTCTCCTCCTCTCCTCTTCCCC-CCTCTCCCGAGCCCCCGCTCCA
TGCCCTCCCGCCCGTAACCACCCATGGCCCTCTCCTCGCGCGCCGCCGCTTTCCCGCACGT-------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------CTCCCTCCCCTCCCCCCGCCCGCGCCCCGCC
GCCGTCTCGCTCCGGCCCCCGCCTCCCCCGCGCTCGGTGCGGCTCGACCACGTCATCCCCGCCGACGCCGCCGAGCTCGG
CCTCGCCGGCGGCGGGCTCCTGGCCGCCGCCATCGAGCACCTGGAGCGGGAGCCCGCCGCCGCGGCCGACGACAAGGCCC
CGCTCGCCGACCTCTCCCCGAGGGAGCTCCAGCTCGTGCTCGTCTACTTCGCGCAGGAGGGCCGCGACGCCTACTGCGCG
CTCGAGGTCTTCGACTGGCTGCGCCGCGCCGACCGCGTCGATGGCGAGACCATGGAGCTCATGACGGCCATCGCCTGCGG
CTGGATCGAGCGCCTCGTGGGGGCCGGGGGTGACGTCTCCGACGTCTCCGCGCTCCTGGGGGAGATGGACTGCGTCGGCC
TCCGCCCCGGCTTTAGCCTCGTCGAGAAGGCCGTCGCGCTCTACTGGGACCGCAGCGAGAGGGCGCGCGCTGTTGAGTTC
GTCAGGGACGTGCTCAGGAGGGGGAGCGTGGCCGCGGGAGGGGAGTATGACGGCGAGCGTGGAGGCCCCGTCGGTTACCT
CGCCTGGAAGATTATGGTAATTGGCTTCACCCATTCCCCTGCAATTTTACCCATGTCAGGTCCTGTGCTTGCTTGTACCT
ATCGTTTATACACAATTGATTGTTGAG--------GCCTCTTAATTGTTCATATCTATGCTAAAAAAA-TGTTCATATCC
TGGCTACGGTTGGAT----TTTTTTTTAACTGGCACCCGAGGGGAGAGGCTCCCCACCTAAACATCTCATTTAAA-----
---AAATGAGAATTGATCCAGTTTATAAGGGAAACCGGATCGAAAACCCTATGCTTGGAAATGGTGATTTCAT-ATTATC
AGAACTACCTATTGAAAACCAATCTTCAGC--------------------------------------------------
--------------------------------------------------------------TCTGGAGTTTTACATGAT
CTGGAACCTTTTTTTTTAATGTTTCTAGTTTCACTTGTTCTGTGTGTGATGGTACCTTTCGTGTTGGATAGGTTGTTGGG
ATGACAGCTGTCTTGTCTTCATTAGTTATGACACACATGTATATTACTTTAAGATGATCATCTTTGATTCTGCTTGTAGA
TTTATTCATCTCGTG----TCATGTTCTTATTCTATCGTATTAGGATAACATGCCTTTG-TTATTACGTTATGAGCACAT
GGTTCAGTCAATAAACTAAGGCCTGACTCCCATGCTGATCACATGTTTGCATATAAAGTTGTTATTTTGTTTCCTGGTTT
ATATTCCAACATTACACTTATTATCATCATTTTTAGCATTGAAAATTTCAGTTGCAAATCACCACCTAATCTATAAGAGG
TCAACTATTATCATATGAAGAAGCACCACAGCTTGTTGCTCCAAAACATTCACCAAGGG-TAGTCATGTCATTTATTTGT
TCTGTACTTGCCAACTGATTTTCGT----TTTATGGTCCTTATCCTAAACCTATGTGCTTCTGTTAGCAACATACAGTAC
AAGCCAAAGACTATCATAAACATTTTGATACCGGAGTAGTACACAGTTTGCATTTTTTTGTTATGTTTTGACTTTTATCT
TGGTAT--GATGAGTCTCTAGTATTTCAAAATGAGCGACTATGTTTGGGTTTGGATAGCTTTGAACTATCGTATTGGTGC
ATATAAATCAAACTGTATTGATGCAGTGATTTCTACTAGAAGTCTTACGGATAATTTTTACCAACTTACCACACATCCAT
TTCTTTTGTCTAGAAACTGTGTGATAACTTTAAGCACTCAACCCTA--GCTGCTTATAAACACCGTTCCATGCTCTTTCT
GTCTCTGATACCAGTCTCATATATCTTAGCTCCTGTTTT-TTAATGTTCTGTGTTACTTTTGTTTTGATAGATGGACGGG
GACTACAGAGATGCTGTTAAATTGGTCATTGAGTTCAAAGAGAGTGGGCTGAAACCTGAAGTATATAGTTATCTTATTGG
ATTGACTGCCTTGGTTAAAGAGCAAAAGGAATTCTCAAAGGCATTGCGTAAGTTGAATCTGTCAGTGAAGGATGGCTCAA
TTGCCAAACTGGATGCTGAGAGCATGCGCAACATCGAGAATTATCAATCCAAATTATTAGGGGATGGTGTTCTTTTATCA
AATTGGGCACTTCAGGAAGGCAGCAGTGAGGTTCTAGGACTTGTGCACGAGAGGCTCCTTTCATTGTACACTTGCGCTGG
TTGTGGCTTAGAAGCTGAGCGCCAACTTTGGGAATTGAAGCTTGTTGGTAGGGAACCTGATACACAGCTCTATGATGTTG
TCTTGGCCATTTGTGCTTCTCAAGGGGAAGCTGCTGCTGTTAGACGATTGCTTGCAGGAGTCGAGTCAACCAGTGCAGGA
AGAAGGAAGAAGTCTATGTCATGGCTCCTGCGAGGCTACCTTAAAGGTGGTTTCTATCTGGATGCCTCGGAAACACTTTT
GCGGATGCTTGATATGGGCGTATCTCCTGATTACCTGGACAGAGCGGCTGTACTGACTGCACTGCAGAGAAACATACAGG
AATCCGGCAACCTAGAATCATACATGAAACTCTGCAAGCGCCTATCTGAGACAGATCTGATCGCACCGTGCGTCCTATAT
CTGTATGTACGGAAATTCAAGCTGTGGATGATGCGCATGCTGTGAGGGTCTCGACAAAGCCTTGAATCATCTGTGGGTGC
TTCAGACGTGTTCATGGCTTCGATTAGGTGTAGAATGTCCCGACTACGGTGAACCAACTGATGCACAATCATGGTTCCTT
GTATATTTTTGACCGGAAAGGAGCTCCCCATGAGCGTTCACCCCCATCAGAGCTGCTGTCTTATTGTCTGAGCAGACTAC
ATGAATGTAAATTTTCAGTGTACCATCCCCAGTTGTGTGGAATGGAGGGCGCTAGCTGCTGTAGGGGAGCATATACCTCT
TACGAAACATTACGTGTATATAGTTGAACAAAAAGAAACTTGTAAAGTTGTGATATAC----------------------
--------------------------------------------------------------------------CTCAGT
TGTCTTCGTAATCTTGTACGTAGCCCTTCTCTGTTTTTGTTGATCCTGATGTGCCTTTTGAACATGAAATCATTGAAATT
GGGTGCCTCTTTTATGGCCTAAACAGTTGCTGGAAGTTATTTGAGATGAAGAACAAATCTCTGTTGCCTTTTCAAAGGTC
CACTAGGGTAGGAATCTGACTGGCACATGGGTGAAATGTATCTGGTGCTTCCTCCTAAAAACATGATACGAGTGTTCACG
GGAAGAATCTCAAGAAATTTGGCAGCATTTACTGAAAACTCAATCTAATACGTGGCCAACTTCAAATGCAAGTTTAATCT
ATACATGCAAATCTAACTCAGACTAATGTTGTTTTCAGTAGAACTACTTTGGTGTTATTTTTTTTGCATAAATAAAATTT
CTCAGAATTGGACGAAACTTTACGGAGGTTTTTTATGAAATAAATAAAAAAATACTTGAGCAAAGAAGTACGAGAGGGGG
GCCACCATGGGCAACAAGCCACAGGGCGTGCCTTGGTGGCTTGTTGGAGTTGTTGCCTCCACATACTTCCGGTTGACCTA
ATTCTAAGCCTATAAGTTTCGTCTTCCCAAGAAAAAGAATCAGAGAGAAAGTTTCGTCGCGTTTTACGATATGGAGCCAC
CTCCTGTTCTTCATCAGAAGCCCTAATTTGGAGTCTGTTCGAGGTTCCGAAGAGAGGGATTCGTCGCTGTCGTCATCACC
AACCGTTCTCCATCAACAATTTCATGATGCTCACAACCATGTGTGAGCAATTCCTTAGTAGGCATACTAGAGGTAGATGG
AGATGGATGAGATTTCTTATGTAATCGTGTCAATTTGTTAGGGCTTGATCCCTAATATCCACTGCGTTCTGAGATTGATA
TTGCTATGACTTTGCTATACTTAATGCTTGTCAATAGGGCCCGAGTGCCATGATTTCAGATATGAACATATATGCTTTCA
TGAATATATATGAGATGTTGATTTTACCTACAAGTTGTATGCACTCGTTATCTTTCTGAACCTTAGACCCCAAGGTGACA
ATGATTGGGATATTGACAGGATGACTTTAACTTGAGGAGTTCATGTATTCACTATGTGTTAATGCTTCGCTCCAATTCTT
TATTAAAATGAGCTTCTTAATTACCCTTAGTTTACATTAGGACTCCGCTGCTACGGGAGGGTAGAACAAAAGACGTCATG
CAAGTTCTTATCGCAAGCATGTATGACTATATACGAAATACATGCCTACATATGATTGATGAATTAGAGCTATTGTGTGT
CGCTCTAAATTGTAACGGTTACATATTGAAATCTCATCTAAATATCCATCGCTACTCCATGCCTACGCTTTAGTACTATT
GTCCTTGCTCAAGTTACTACTGCTGCTCAGTTTGCTACCAAAACTACTACTGTTACCGTTACCATTACTATCACTGCTAT
A-----------------------TATTGCAAGGAAGTGATTCTCAGGTGTGGTTGAATTAGCAACTCAACTGCTAAGGC
TTATAAATATTCCTTGGCTCCCCTTTGGTCGAATCAATAAATTTAGATGAAATACTATCCTCGAAGACTGTTGCAATCTC
CTATACTTGTGGGTCGTCATTCACACGCTTAAGGGTCATCGATGTGTTGAGTACTAGATGGGTCAGGAGCTTGAGAGAAA
AATCACCAGAATAGTTTCGGAGATGTTAAAAGCATTTCAAAGAGGGAACCGAAAGAGCTTCG----
>SNPs
----S--------SS---S---SS---------S---------------S-S---------SS-------S---------
----S-------------------S--S------------------------------------------------S---
---------------S-S-----------------------------S--------S-S-------S-------------
-S------S--SS--S----------S--S--SS--S-------SS-------------------------------S--
-----------S-S----------------S-SS-SS-------------------------------------------
------------S---S-S-S-----------------------------------------------------------
---------------------------------------S-------S----S-----------S-SS-----SS-----
----------------------SS-------S---S-SS-SS-SS--SSS-SSSSSSSSSSSSSSS--------------
--SS---------S------S---------------------S-S--------S--------------------------
-----------------S----------------------------------------------------------S---
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------SSSS-SS--
--------------S-----------------------------------------------------------------
S---------------------------SSSSSSSS--------------------------------------------
--------------------------------------------------------------------------------
-------------S-----------------------------------------------SSSSSSSS-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------S---
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
---------------------------S-----------------------SS---------------------------
------------------S--------------------------------------------------------S----
-----------------------------------S-----------------------S--------------------
--S-------------------------------------------------S-----------S---------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
------S--------------------S---------------SS-----------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------S-----------------------------------------
-------------------------------------------------------------S-S----------------
--------------------------S------------S---------------------------------------S
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S--------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
----------S----------------S-----------------------------------------S----------
--------------------------------------------------------------------------------
----------------------------------S-----------------------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
-------------------------S-SS--S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S---------------------------------S---------------------------
---------------S----------------------------------------------------------------
------------S---------S-------------------S-----------------------------S-------
-------------------------------------------SS-------S---------------------------
-----S------------------------------------------------------------
>forward_1313
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------GTCATCCATCGACTGGCCTC-----------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>reverse_2556
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------CATCC
TGGCTACGGTTGGAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------
>forward_1315
--------------------------------------------------------------------------------
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---------------CATCCATCGACTGGCCTCTG---------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>reverse_3245
--------------------------------------------------------------------------------
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--------------------------------------------TTTTCAGTTGCAAATCACCACCA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------
>forward_1316
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----------------ATCCATCGACTGGCCTCTGG--------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>reverse_3639
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--------------------------------------TAAGTCTTAGGGATCATTTTTACCCAC---------------
--------------------------------------------------------------------------------
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>forward_3609
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---------------------------------------------------------------------TGGTATGGTGC
GCGTAAATT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_6684
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-------------------------------------------CAGTTGAGTGCCAGATGGGT-----------------
------------------------------------------------------------------
