>input_sequence_25179
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------------------------------------------------------------------------ATGGGCTC
TGTCCTTGAGGTCGATGTGGATGGTGAAGCCGTCTTCTTCCTTGATAAGGTGGGTGGCCGCCTCTA---CTTC-------
-----------CTCCTCCCCCAATTTCGCTCGTCTTACTTG---TTCTTCCTCCAAGGTCTCGATTTGCTCTGTGTTCTT
GTTTTTTCGTTTCTGTTTCTTCCTTTCATATAGGTACCGTTGTGTGGCTGCTGGTTTCTAGCGTGTAGCG-ATTCCTGGA
GGTCTAGCCTCTAGGGGGTGATGACCAGGGAGGCTTCGACATATCCTGGTGGAGTT----TGTGCCTGTTTTAATTCTAG
CCCTTGTTGCTTCCTCTGGCTAAATCAGCTCAGGTAGGAC--TAGGTAGCACCCAAATTTTTGGCGACACCGGCGTACCA
GAATTTTTGGCATCTACCCTCTGACATTTCTCCCCATTTTTGGTCTCTTGCATCGCTTCCTTTTCGACCTTCCGAGCTGC
TTGGTTTCGTCTCCATCTCCATCTCCAGTTGCACTTGGTCTCGG-GTCCTTGGGGCGAGTGTTTCTTGTCACTTCCTGCT
GGTTCCCTTCCCAACTCAGAGCTTCTACTTCTTGTTCCTTCTGCCGTGAATCCATCCGGTCATGATTCACTCCATGGACT
AAAATCACCCGCGCTGTCTGTAATGTCATGTCCCCTAACCACATGTTCTTGCTGTAAATTTGCCTGACACT--CTCGTGT
AACTGTAAATTTTAATCCTGTCTGTTTCTT-TTTCCTTCCGGAAAGGCATC---TCAATCTTGTGCTATTCAAGCGCAAT
GGGCGTGGGATCCATTCCATTAAGCTGCAGAGTGTTTTAATGGCCGCACAGTGAAACTGCGTCCCTTTCCCTATCATCGC
CTTCAATGAGCCAGCCACCAGCTCGCCATTGCCGGTCCTTCTCCTCCC-CCCATTAATGGCGAAACTGTCCATGGTCTTT
TCTGGGGCCTGAACGTGCTTGTGGTGCCTCTGCTCTCGCGTGG----TCGCGTCGTTCCGTTCCTCCT---CCCCCTGCC
GCGTGCTCACGTTAATGGCTTCATAGCTACACCTCATCTTCCTCCTCGCCTTTATTCTCCCCGAGCTTTAATGGCGTTTG
GTGGCTAAAACGGCCGGTAGCTTCTCGCCATTAAAAAGATTAGATTGTTC-TCTGGAAAGGACCTGATCGCTCTTTTGGT
GCCCGCATTAACTCGGCATCTTGAGTGGGTGCGGATTGCTCCAGTGTAGCACGCTGTCCTTGGATTCTTCTTCCGCTAGT
ACCCCTGCTAATCTACGCGTGGCGTGCTTCATTAATTCTATGGCGTGCTCGTTCTCATTTGTTGTTGGATGATTGGCAGG
ACGTTCTTGCACCGTTCAGCAGCAGGATCAAGAATCTGTTCGAGGACGAGCTGGTCGGAGCTGCGGCGTCGCCTCGTCGT
AGACTAGTGTTGCACGGCTTCCCCGGCGGCGCCGAGGCGTTCGAGCTCGTCGCGAGGTTCTGCTACGGCGGCGGCGGCGG
AGTGACGGTGACCGCGGCCAACGCCTGCGCGGTGCGGTGCGCGGCACAGTACATGGAGATGGCGGACGCGCCCGCGG---
---------CCACCGCCCCGAGTTTGGCCAAGGTGGCGGATAAGGCGCTGGAGGATATGCCGCACTGGCCGTGGCATTGC
GTGGTGGACGCCGTGAAGCAGTGCCAGAGCCTCTTCCCGCTTGCCGAATCCACCGGGGTGTTCGACAAGGTCGTCGGCGC
GCTGCTGGTTCAGATGGCCATCCCTGCCCCAGGTGACGCCACCCCGACGAGCTCCTCGCCGGAGAGCTCGGCGTTCCGCT
TCTCCTGCGATACCAAGTGCAGCAGCCTCAGCCTGCGCCGCACCTGGTGGTTCGAGGACCTCGTCGTCCTCAGCCCCGGC
ATGGTGGAGCGCGTCGCCAAGGCGCTCCTGGCCAGGGGCGCTGACCACGGCATCGTCGCCCGGTTCCTCTTCTACTACCT
CAAGTGCCGCATCGCCGGCGCCAACGCCGAGGACAAGAAGGCGATGCTGGAGGCAGCGATCACCGTCATTGCCGACCTCG
ACCGGAGTTCCGTTTCTTGCAAGGGCCTGTTCGGCATCCTGAGGATCGCCTCCCCTGTCAAGCTGGCCGCCGGTTGCCAG
GAAATGCTCGTGGCCATGATAGGCCGCAAGCTCGACCACGCGACGCTCGACAACCTGCTGGTCCAAGCGCCGTCCGGCAC
GGGCAGCTTGTACGACGTGAGCCTGGTGCTCAGGTTCCTGGAGGCGTTCCTGCGGCACGGCGACGAGCCGGGGAGGCTGA
AG---GTGGGCGAGCTCATGGACTTGTACCTGGCCGAGGTCGCGCCGGACCCGTCGCTGCGGCCGGCCAGGTTCGTCGAG
CTTGCCACCGCGCTGCCGGCGGCCGCGAGGGACTGCCACGACGCGCTGTACCGCGCCATCGACGTCTACTTCCAGGTACT
ACATTCTCCCCAGAACTCAGGGATGTCAGAAGCAGAATTGAGTTGCACAGTGCCTCGCATTGATTGCTCGAGCTGAAAAA
A----TAACTCTGTCCCGTTCATTCATGGCCGCAGGTCCACGGTCGACTGACGGACGACGAGAAGATGAAGATCTGCAAG
GGCATCAACTACGAGAAGCTGTCGCCGGAGTGCTGCAAGCACCTGGCAACCAACTCCGGCTTCCCGACGAGGGCGGCGGT
GCAGGCGCTGGCGTCCCAGCACACGGTGCTCAAGGGCATCATCCGCCACTCCGGCCCGCTGAAACCGGCGTCGCCCCCGC
CTCCTCCGGCCGCCCACCGCGAGAGCTACGACGACGCCGGCGGCGACAACAACGGGCAGGTGGTCCTGTACGCGAGCAGG
CTGGAGCTGACGCTGGAGAACCAGAACCTCAAGTCGCTCCTGGACAGCATGCACTGGCGGGTGATGGAGCTGGAGAAGGT
GTGCAGCCGGATGAAGACGCAGATGACCAAGATGAAGGCCTCCCGGCGAGGAGCAGGAGGCGGCGCCGCCGCGGCGAGAT
CACTCCCCAGGATGTGTTCTTGA---------------------------------------------------------
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>chr2B_1_TraesCS2B01G238600
GCCTCGGACATTTTTCTTCAGTTCAGGTCCAGTCTTTGCGTTGCCTCGGCCGACGTCATGACTACGGGGGTGTTAAAGTA
CAATGTGTATATACCGTACAATGTATGTATTTAGTCAAGCGTTGTACGTGCGAGCGCGTGTGGTCGTGGCACACGATCTG
TATGTAGTGGCGCACGATCCCCTCGGTTGTGGCCTCCTGTAACCTGTATATTACCGCCAGCCGATGAGCTAATTGATGTG
CATTGAGT------------------------------------------------------------------------
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CTCATTCCTTCTCACTCCTCAAACACTAAACTTCCCACCATCTAATTACAATACCCACATGAGCCTTCAGAAACGTT---
--------------------------CATCTGTATTTCAACAGAAACGACATTTTTGTGTTTACCCCAGCGATGGCAAAG
ATAACGTTCACATCAGGGT----------------------ATCAGGGTATCAGAGATCTCAGTGTCACATGGAGACT--
GATGACCCAACTCAGATACACTGCCTTCTTAATC-----CATGACAGCACAAGGACTGCATTTCTGTCTCTTCACGCTTC
ACCAGCCCA----CTTCCCAGAAAGAAAACCACCCCTCTTCGTCTT------CAA-CCCGCTAGTATAAAG---------
TACCACCCAAGG-----ATACATATGCAGATAAATCAAGACCCGGCCTTACATATTCCCCAAACCTCCTCTGAAAACTCC
ACTTGCATGCTAGCAGGGGCTGTCAGGAGCTCAGATCATCCACCAACTTCCTTTGGCCCCTCTCCTCTCCTTCTCTCTCT
CTCT----------CACACACACACACACACACACTCCTTTCCTGCTCCAGATTTGTGGCATTGACCACTCATCAGTAAG
GACTCTCCCAGAGGAGAGGCCAGCCAGAGCATCTGCCCTCCCTTGGCCATTTTGCCATTGGCAGCTTCGGCTTGGGCTTT
TCTGCAAGCGAGGTGTGGGTGGTGGCGCTGCCATCCCC------------------------ATCATTGCAGCCTTTTTA
CTACT---CCTACATCTCTTCTTTCCCATGTTGATGCTTTAAAGCTGTTGGGGAATAGCAGCAGAAAGAAGGATGGGCTC
TGTCCTTGAGGTCGATGTGGATGGTGAAGCCGTCTTCTTCCTTGATAAGGTGGGTGGCCGCCTCTA---CTTC-------
-----------CTCCTCCCCCAATTTCGCTCGTCTTACTTG---TTCTTCCTCCAAGGTCTCGATTTGCTCTGTGTTCTT
GTTTTTTCGTTTCTGTTTCTTCCTTTCATATAGGTACCGTTGTGTGGCTGCTGGTTTCTAGCGTGTAGCG-ATTCCTGGA
GGTCTAGCCTCTAGGGGGTGATGACCAGGGAGGCTTCGACATATCCTGGTGGAGTT----TGTGCCTGTTTTAATTCTAG
CCCTTGTTGCTTCCTCTGGCTAAATCAGCTCAGGTAGGAC--TAGGTAGCACCCAAATTTTTGGCGACACCGGCGTACCA
GAATTTTTGGCATCTACCCTCTGACATTTCTCCCCATTTTTGGTCTCTTGCATCGCTTCCTTTTCGACCTTCCGAGCTGC
TTGGTTTCGTCTCCATCTCCATCTCCAGTTGCACTTGGTCTCGG-GTCCTTGGGGCGAGTGTTTCTTGTCACTTCCTGCT
GGTTCCCTTCCCAACTCAGAGCTTCTACTTCTTGTTCCTTCTGCCGTGAATCCATCCGGTCATGATTCACTCCATGGACT
AAAATCACCCGCGCTGTCTGTAATGTCATGTCCCCTAACCACATGTTCTTGCTGTAAATTTGCCTGACACT--CTCGTGT
AACTGTAAATTTTAATCCTGTCTGTTTCTT-TTTCCTTCCGGAAAGGCATC---TCAATCTTGTGCTATTCAAGCGCAAT
GGGCGTGGGATCCATTCCATTAAGCTGCAGAGTGTTTTAATGGCCGCACAGTGAAACTGCGTCCCTTTCCCTATCATCGC
CTTCAATGAGCCAGCCACCAGCTCGCCATTGCCGGTCCTTCTCCTCCC-CCCATTAATGGCGAAACTGTCCATGGTCTTT
TCTGGGGCCTGAACGTGCTTGTGGTGCCTCTGCTCTCGCGTGG----TCGCGTCGTTCCGTTCCTCCT---CCCCCTGCC
GCGTGCTCACGTTAATGGCTTCATAGCTACACCTCATCTTCCTCCTCGCCTTTATTCTCCCCGAGCTTTAATGGCGTTTG
GTGGCTAAAACGGCCGGTAGCTTCTCGCCATTAAAAAGATTAGATTGTTC-TCTGGAAAGGACCTGATCGCTCTTTTGGT
GCCCGCATTAACTCGGCATCTTGAGTGGGTGCGGATTGCTCCAGTGTAGCACGCTGTCCTTGGATTCTTCTTCCGCTAGT
ACCCCTGCTAATCTACGCGTGGCGTGCTTCATTAATTCTATGGCGTGCTCGTTCTCATTTGTTGTTGGATGATTGGCAGG
ACGTTCTTGCACCGTTCAGCAGCAGGATCAAGAATCTGTTCGAGGACGAGCTGGTCGGAGCTGCGGCGTCGCCTCGTCGT
AGACTAGTGTTGCACGGCTTCCCCGGCGGCGCCGAGGCGTTCGAGCTCGTCGCGAGGTTCTGCTACGGCGGCGGCGGCGG
AGTGACGGTGACCGCGGCCAACGCCTGCGCGGTGCGGTGCGCGGCACAGTACATGGAGATGGCGGACGCGCCCGCGG---
---------CCACCGCCCCGAGTTTGGCCAAGGTGGCGGATAAGGCGCTGGAGGATATGCCGCACTGGCCGTGGCATTGC
GTGGTGGACGCCGTGAAGCAGTGCCAGAGCCTCTTCCCGCTTGCCGAATCCACCGGGGTGTTCGACAAGGTCGTCGGCGC
GCTGCTGGTTCAGATGGCCATCCCTGCCCCAGGTGACGCCACCCCGACGAGCTCCTCGCCGGAGAGCTCGGCGTTCCGCT
TCTCCTGCGATACCAAGTGCAGCAGCCTCAGCCTGCGCCGCACCTGGTGGTTCGAGGACCTCGTCGTCCTCAGCCCCGGC
ATGGTGGAGCGCGTCGCCAAGGCGCTCCTGGCCAGGGGCGCTGACCACGGCATCGTCGCCCGGTTCCTCTTCTACTACCT
CAAGTGCCGCATCGCCGGCGCCAACGCCGAGGACAAGAAGGCGATGCTGGAGGCAGCGATCACCGTCATTGCCGACCTCG
ACCGGAGTTCCGTTTCTTGCAAGGGCCTGTTCGGCATCCTGAGGATCGCCTCCCCTGTCAAGCTGGCCGCCGGTTGCCAG
GAAATGCTCGTGGCCATGATAGGCCGCAAGCTCGACCACGCGACGCTCGACAACCTGCTGGTCCAAGCGCCGTCCGGCAC
GGGCAGCTTGTACGACGTGAGCCTGGTGCTCAGGTTCCTGGAGGCGTTCCTGCGGCACGGCGACGAGCCGGGGAGGCTGA
AG---GTGGGCGAGCTCATGGACTTGTACCTGGCCGAGGTCGCGCCGGACCCGTCGCTGCGGCCGGCCAGGTTCGTCGAG
CTTGCCACCGCGCTGCCGGCGGCCGCGAGGGACTGCCACGACGCGCTGTACCGCGCCATCGACGTCTACTTCCAGGTACT
ACATTCTCCCCAGAACTCAGGGATGTCAGAAGCAGAATTGAGTTGCACAGTGCCTCGCATTGATTGCTCGAGCTGAAAAA
A----TAACTCTGTCCCGTTCATTCATGGCCGCAGGTCCACGGTCGACTGACGGACGACGAGAAGATGAAGATCTGCAAG
GGCATCAACTACGAGAAGCTGTCGCCGGAGTGCTGCAAGCACCTGGCAACCAACTCCGGCTTCCCGACGAGGGCGGCGGT
GCAGGCGCTGGCGTCCCAGCACACGGTGCTCAAGGGCATCATCCGCCACTCCGGCCCGCTGAAACCGGCGTCGCCCCCGC
CTCCTCCGGCCGCCCACCGCGAGAGCTACGACGACGCCGGCGGCGACAACAACGGGCAGGTGGTCCTGTACGCGAGCAGG
CTGGAGCTGACGCTGGAGAACCAGAACCTCAAGTCGCTCCTGGACAGCATGCACTGGCGGGTGATGGAGCTGGAGAAGGT
GTGCAGCCGGATGAAGACGCAGATGACCAAGATGAAGGCCTCCCGGCGAGGAGCAGGAGGCGGCGCCGCCGCGGCGAGAT
CACTCCCCAGGATGTGTTCTTGATCGCCCCATTTCACTCTGCACAGTAGTGAATGTACATACTGCTAGGAGCAGCTGCAG
CGTCCTGTTTTCTGTTC--TTTTTTGCTTCACTTTTGTCAACTTTTATCTGTGTATCGATTCCTGGAGATTGATCTAATC
TGATGTGGGCGGAGCTTGGCGAATCTGTTCTTGTTACATCTCAGTGAACAGATGATCAAATAACTAACAACCTTTTCAGA
AATGTAAGTAAAGATTCCAAGTACAACTGCTACATTTTTTAGGGTACTGACTATGCCATGACCATGTCGTGCAATCTACA
AAAACAATTCAATCCATGACCTCGACAGTTCAGCAA-GGATAAACAAATCCTCCGGGATGTCGTGGTTAAGTTACTTGTT
AACCTCTAAGAACGTGCAGCGTAAAG-----CGTGATCAAGCAAAAAAACAAGATGACATCAT--GGCGGCCAAGGTCAG
GGGAACAGTTGACTTGTAGACCGTAAATTAACAGGCCGGGGTTAAAGATTGATGTTACAGTGTTTGGAAAGCAAGGACAC
CTCTGACCGTCTGATATGGTTTGAGACTTTGAGTGGCAAAGAACATGGGCCATTGGGTCTTTCTAGCTTGGCAATTGGCA
GGGGCTTTCTCATTGGCTTTTTGGATGCTCTTTGAGAGACTAAAACAAGATTTGAAT---GAGTGTGCAGTGTCCAACCT
CCCACATGTGCTCATCTAGT------------TACTTTTCATTACAATTGTGCCTTCCTCATGCTTCCAGTTACAGCAGA
ATATAGAATTCTTCAATTCTAACTCACCATTTGCTTCCGTGCCTTGATATAAACTTTTTGTGGCCTTTTTTTGGCTGCAT
TTGTTTGTAAATAGAAGATTTCGTAAAAAAAATTTACTTTGCTTTACTTCTTTAAAACTTTAGGGCATCTCCAACGCTAA
CCCGCAAACCAGACACCGCACGCTCCTCCTTGGACACGGGCCCTCGAGCCCGAGGGACCGTCGCCAACGCCACTTCCGAA
GTACTGGA
>chr2D_1
GCCTCGGATATTTTTCTTCAGTTCAGGTCTAGTCTTTGCGTCGCCTGGGCCGACGTCACGACTGCGGGGGGTGT----TA
CACTGTGTATATACCGTACAATGTATGTATTTTGTCAACCATTGTATGTGCGAGCGCGTGTGATCGTGGCACACGATTTG
TATGTAGTGGCGCACGATCCCCTCGGTTGTGGCCTCCTGTAACCTGTATATTACCCCCAGCGGATGAG-TAATTGATGTG
CATTGGGTCTCATTCCTCGAAATCACTGATTAAGGAGTACTCATTGCAAAGATCACTCCAATTCCCCTGGTTGCGACAAA
TGGCGCACATGCAGCGCGCCACTTGTCGCAACCTGGGAGTTTTCCCTTTTTTCGTAGATCCATTTATTCAAAACATTTTA
TCTCTCAAACCGCGCGTCCAAATCTCGAACCGCTTTCACTGTTGGATTCCTCGCGTCGAGATCTTCAAAACTGGATCCCA
TGTTGATAGGTTTAGACGAACTTTTTTTTCACAAAAAAAACTGGACGAAAAAACCGAACCAGGAGCATGGGTTTTTTCCC
TTTCGAAAGAGGCACGCCCGTGCCTCTCACGAAATCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCGCAGAA
GGAAAAAAAGAGAAAACACGTTTTTTTCCATTTCCGAGGAGGCACGGCCGTGAGTCTCGTGAAAGCACAACCGTGCCTCT
CGCGGAAGCAAAACCGTGACTCTCGCGAAAGAAAAAAAACAAACAGAAAACGTGCTTTTTTCGTTTCCGAGAGGCATGGC
CGTGACTCTCGTGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCGCAAAAGAAAAAAAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTCGTTTCCGAGTGGCATGGCCGTGACTCTCGCGAAAACACAACCGTGCCT
CTCGCGGAAGCAAAACCGTGACTCTCGCGAAAGAAAAACAGAAAACGCGTTTTTTTCCGTTTCCGAGAGGCACGGCCGTG
ACTCTCGCAAAAGAAAAAACGTGCCTCTCGCGAAAGCAAAACCGTGACTCTTGCGAAATAAAAAAAAGAAAATGTGTTTT
TTTATGCAATTTTTTTAAATTTTTTTTATTATTGAAAAGCTAAGGAAGACCGGTGGAAAACCAAAACGTAAAAAAAACTA
AAAAAACCGTTTAAAAAGCCGAAAACACGTGCGAAAAAATAAAAATAAAAATCCGAAGGAAGCGCCGAGAGCGCGACACG
TGGCGAATGGCTGAGAGCGCGCCAAGTGGCGCTGATCGTTGCGAGGCTCCCGAAGGAGTGCTCGTTAACTAGTTGCTCTC
CTCATTCCTTATCCCTTCTCAAACACTAAACTTCC---------------------ACATGAGCCTTTAAA--TTTTTTC
TGAAATTGTTTTATGGGCCTAAAGCCCATCTGTATTTCAAGAGAAACGACATTTTTGTATTTACCCCAGCGATGGCAAAG
ATAACGCTCACATCAGGATATCAGATACCCCCTAAAAAA--ATCAGGGTATCAGATATCTCAGTGTCACATGGAGACT--
GATGACCCAACTCAGATACACTCTCTCCTTAATTCGATCCAAGACAGCACAAGGACTGCATTTCTGTCTCTTCACGCTTC
AACAGCCCA----CTTCCTATAAAGAAAACCACCTCACTTCGTCTTCAACCTGCTTCCTGCTAGTATAAAG---------
TAGTACCACCCAAGGATATACATATGTAGATAAATCAAGACCCGGCCTTACATATTCCCCAAACCTCCTCTGAAAACTCC
ACTTGCATGCTAGCAGAGGCTGTCAGGAGCTCAGATCATCCACCAACTTCCTTTGGCCCCTCTCCCCTCCCTCTCTCTCT
CTCTCTCTCACACACACACACACACACACACACACTCCTTTCCTGCTCCAGATTTGTGGCATTGACCACTCATCAGTAAG
GACTCTCCCAGAG----------------CATCTGCCCTCCCTTGGGCATTTTGCCATTGGCAGCTTCGGCTTGGGCTTT
TCTGCGAGCGAGGTGTGGGTGGTGGCGCTGCCATCCCCTTTGTGCTTGCTGGTTCCATCCCCATCATTGCAGCCTTTTTA
CTACT---CCTACATCTCTTCTTTCCCATGTTGATGCTTTAAAGCTGTTGGGGAATAGCAGCAGA---AAGGATGGGCTC
TGTCCTTGAGGTGGATGTGGATGGCGAAGCCGTCTTCTTCCTTGATAAGGTGCCCGCCCGCCTCTTCTTCTTC-------
-----------CTCCTCCCCCAATTTCGCGCGGCTTACTTG---TTCATCCTCCAAGGTCTCGATTTGCTCTGTGTTCTT
GTTTTTTCGTTTCTGTTTCTTCCTCTCCTATAGGTAGCGTTGTGTAGCTGCTGGTTTCTAGCGTGTAGCG-ATTCCTGGA
GGTCTAGCCTCTAGGGGACGATGACCGA-GAGGCTTTGACATATCCTGGTGGAATGGAGGTGTGCCTGTTTGAATTCTAG
CCCTTGTTGCTTCCTCTGGCTAAATCAGCTCAGGTAGGAC--TAGGTAGCACCCAAATTTTTGGCGACACCGGCGTACCA
GAATTTTTGGCATCTACCCTCTGACATTTCTCCCCATTTTTGGTCTCTTGCATCGCTTCCTTTTCGACCTCCCGAGCTGC
TTGGTTTCGTCTCCATCTCCATCTCCAGTTGCACTTGGTCTCGG-GTCCTTGGGCCGAGTGTTTCTTGTCACTTCCTGCT
GGTTCCCTCCCCAACTCACAGCTTCTACTTCTTGTTCCTTCTGCCGTGAATCCATCGGGTCATGATTCACTCCATGGACT
AAAATCACCGCGC---------------TGTCCCCTAACCACATGTTCTTTCTGTAAATTTGCCTGACACTCTCTCATGG
AACTGTAAATTTCAACCCCGTCTGTTTCTTTTTTCCTTCCGGAAGGCGTCTCGATCGATCTTGTGCCATTCAAGCGCAAT
GGGCGTGGGATCCATTCCATTAAGCTGCAGAGTGTTTTAATGGCCGCACAGTGGAACTGCGTCCCTTTCCCTATCATCGC
CTTCAAT-AGCCAGCCACCTGCTCGCCATTGCCGGTCCTTCTCCTCCC-CCCATTAATGGCGAAACTGTCCATGGTCTTT
TCTGGGGCCTGAACGTGCTTGTGTTGCCTCTGCTCTCGCGTGG----TCGCGTCGTTCCATTCCTCCTCCTCCCCCTGCC
GCGTGCTCACGTTAATGGCCTCATAGCTACGCCTCATCTTCCTCCCCGCCTTTATTCTCCCCAAGCTTTAATGGCGTTTG
GTGGCTAAAACGGCCGGTAGCTTCTCGCCATTAAAAAGATTAGATTGTTC-TCTGGAAAGGACCTGATCTCCCTTTTGGT
GCCCGCATTAACTCGGCATCTTGAGTGGGTGCGGATTGCTCCTGTGTAGCACGCTGTCCTTGGATTCTTCTTCCGCTAGT
ACCCCTGCTAATCTACGTGTGGTGTGCTTCATTAATTCGATGGCGTGCTCGTTCTCATTTGTTGTTGGATGATTGGCAGG
ACGCTCTTGCACCGTTCAGCCGCAGGATCAAGAGTCTGTCCGAGGAGGAGCTGGTCGGAGCTGCGGCGTCGCCTCGTCGC
AGACTAGTGTTGCGCGGCTTCCCCGGCGGCGCTGAGGCGTTCGAGCTCGTCGCGAGGTTCTGCTACGGCGGCGGCGGCGG
AGTGACGGTGACCGCGGCCAACGCCTGCGCGGTGCGGTGCGCGGCACAGTACATGGAGATGGCGGACTCGCCCGCGGCGA
CGGCAGCGTCCACCGCCCCGAGTTTGGTGAAGGTGGCGGATAAGGCGCTGGAGGATATGCCGCACTGGCCGTGGCATTGC
GTGGTGGATGCCGTGAAGCAGTGCCAGAGCCTCTTCCCGCTCGCCGAATCCACCGGGGTGTTCGACAAGGTCGTCGGCGC
GCTGCTGGCTCAGATGGCCATCCCTGCCCCAGGCGACGCCACCCCGACGAGCTCCTCGCCGGAGAGCTCGGCGTTCCGCT
TCTCCTGCGATACCAAGTGCAGCAGCCTCAGCCTGCGCCGCACCTGGTGGTTCGAGGACCTCGTCGTCCTCAGCCCCGGC
ATGGTGGAGCGCGTCGCCAAGGCGCTCCTGGCCAGGGGCGCCGACCACGGCATCGTCGCCCGGTTCCTCTTCTACTACCT
CAAGTGCCGCATCGCCGGCGCCGGCGCCGAGGACAAGAAGGCGATGCTGGAGGCGGCGATCACCGTCATTGCCGACCTCG
ACCGGAGTTCGGTTTCTTGCAAGGGCCTGTTCGGCATCCTGAGGATCGCCTCCCCGGTCAAGCTGGCCGCCGGTTGCCAG
GAAATGCTCGTGGCCATGATAGGCCGCAAGCTGGACCACGCAACGCTCGACAACCTGCTCGTCCAGGCGCCGTCCGGGAC
GAGCAGCCTGTACGACGTGAGCCTGGTGCTCAGGTTCCTGGAGGCGTTCCTGCGCCACGGCGACGAGCCGGGGAGGCTGA
AGAAGGTGGGCGAACTCATGGACTTGTACCTGGCCGAGGTGGCCCCGGACCCGTCGCTGCGGCCGGCCAGGTTCGTCGAG
CTTGCCACCGCGCTGCCCGCCGCCGCGAGGGACTGCCACGACGCGCTGTACCGCGCCATCGACGTCTACTTCCAGGTACT
ACATTCTCCGCAGAGCTCAGGGATGTCAGAAGCAGAATTGAGTTGCACAGTGCATCGCATTGATTTCTCGAGCTGAAAAA
A----TAACTCTGTCCCGTTCATTCATGGCCGCAGGTCCACGGCCGACTGACGGACGACGAGAAGATGAAGATCTGCAAG
GGCATCAACTACGAGAAGCTGTCGCCGGAGTGCTGCAAGCACCTGGCGACCAACTCCGGGTTCCCGACGAGGGCGGCGGT
GCAGGCGCTGGCGTCCCAGCACACGGTGCTCAAGGGCATCATCCGCCACTCCGGCCCGCTGAAGCCGGCCTCGCCCCCGC
CTCCTCCGGCCGCCCACCGCGAGAGCTACGACGACGCGGACGGCGACAGCAACGGGCAGGTGGTCCTGTACGCGAGCAGG
CTGGAGCTGACGCTGGAGAACCAGAACCTCAAGTCGCTCCTGGACAGCATGCACTGGCGGGTGATGGAGCTGGAGAAGGT
GTGCAGCCGGATGAAGACGCAGATGACCAAGATGAAGGCCTCCCGGCGA------GGAGGAGGCGCCGCGGCGGCGAGAT
CACTCCCCAGGATGTGTTCTTGATCGTCCCATTTCACTCTGCACATTAGTGAATGTACATACTGCTAGGAGCAGCTGCAG
CGTCCTGTTTTCTGTTC--TTTTTTGCTTCACTTTTGTCAAATTTTCTCTGTGTATCGATTCCTGGTGATTGATCTAATC
TGATGTGGGTGGAGCT-GGGGAATCTGTTCTTGTCACATCTCAGTAAACAGATGATCGAATAACCAACAACCTTATCAGA
AATGTAAGT-AAGATTCCAAGTACAACTGCCACATTTTTTAGGGTACTGCCTATGCCATGACCATGTCGTGCAATCTACA
AAAACAATTCAATCCATGACCTCGATAGATCAAAAGGGGATAAACAAATCCTCCGGGATGTCGTGGTTAAGTTACTTGTT
AACCTCTAAGAACGTGCAGCGTAAAGTAAAGCGTGATCAAGCAAAAAAG-AAGATGACATCATATGGCGGCCAAGGTCAG
GGGAACAGTTGACTTGTAGACCGTAGATTAACAGCCCGGGGTTAAAGATTGATGTTACAGTGTTTGGAAAGCAAGGACAC
CTCTGACCGTCTGATATGGTTTGAGACTTTGAGGGGCAAAGAACATGGGCCATTGGGTCTTTCTAGCTTGGCAATTGGCA
GGGACTTTCTCCTTGGCTTTTTGGATGCTCTTTGAGAGACTAAAACAA------AATGAGGAGTGTGCAGTGTCCAACCT
CCCGCATGTGCTCATCTAGTCATGCTTCCGGTTACTTTTCATTGCATTTGTGCCTTCCTCATGCTTCCAGTTACAGCGGA
ATATAGAATTCTTCAATTCTAGCTCACCTTTTGCTT---TGCCTTGATATAAACTTTTTGTG------------------
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>chr2A_246
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-----AGT------------------------------------------------------------------------
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CTCATTCCTTCTCCCTCCTCAAACACTAAACTTCCCACCATCTAATCATAACAGCCAGATGAGCCTTCAATTTTTTTTTC
TGAAATTGTTTTATGGTCCTAAAGCCCATCTGTATTTCAACAGAAACGGCAATTTTGTGTTTACCCAAACGATGGCAAAG
ATAATGCTCACATACCACTAAGAAAAAAAGATAATGCTCACATCAGGGTATCAGATATCTGAGTGTCACATGGAGACTCT
GATGACCCAACTGAGATACACTCTCTTCTTAATG-----CAAGACAGCACAAGGACTGCATTTCTGTCTCTTCACGCTTC
ACCAGCCCACTTCCTTCCTATAAAGAAAACCACCCCTCTTCGTCTTCGTCTTCAA-CCTGCTAGTATAAAGGGAAGTACC
TACCACCCAAGG-----ATACATATGTAGATAAATCAAGACCCGGCCTTACATATTCCCCAAACCTCCTCTGAAAACTCC
ACTTGCATGCTAGCAGAGGCTGTCAGGAGCTCAGATCATCCACCAACTTCCTTTGGCCCCTCTCCTCTCCACCCCT----
------------------CACACACACACACACACTCCTTTCCTGCTCCAGATTTGTGGCATTGACCACTCATCAGCAAG
GACTCTCCCAGAG----------------CATCTGCCCTCCCTTGGGCATCTTGCCATTGGCAGCTTCGGCTTGGGCTTT
TCTGCGGGCGAGGTGTGGGTGGTGCCGCTGCCATCCCCTTTGTGCTTGCTGGTTCCATCCCCATCATTGCAGCCTTTTTA
CTACTACTCCTACATCTCTTCTTTCCCATGTTGATGCTTTAAAGCTGTTGGGGAATAGCAGCAGA---AAGGATGGGCTC
TGTCCTTGAGGTGGATGTCGATGGTGAAGCCGTCTTCTTCCTTGATAAGGTGACCGCCCGCCTCTT---CTTCTTCTTCT
TCCTCCTCCCCCTCCTTCCCCAATTTCGCGCGCCTTGCTTGTTCTTCTTCCTCCAAGGTCTCGATTTGCTCTGTGTTCTT
GTTTTTTCGTTTCTGTTTCTTCCTCTCCTGTAGGCACCGTTGTGTAGCTGCTGGTTTCTAGCGTGTATCGAATTCCCAGA
GGTCTAGCCTCTCTCTAGGGGGTGA-----------TGACATATCCTGGTGGAATGGAGGTGTGCCTGTTTGAATTCTAG
CCCTTGTTGCTTCCTCTGGCTAGATCAGCTCAGGTAGGACTATAGGTAGCACCCAAATTTTTGGCGATACGGGCGTACCA
GAATTTTTGGCATCTACCCTCTGACATTTCTCTCCATTTTTGGTCTCTTGCATCGCTTCCTTTTCGACCTCCCGACCTGC
TTGGTTTCGTCTCCATCTCCATCTCCAGTTGCATTTGGTCTCGGGGTCCTTGGGGCGAGTGTTTCTTGTCACTTGCTGCT
GGTTCCCTTCCCAACTCAGAGTTTCTACTCCCTGTTCCTTCTGCCGTGAATCCATCCGGCCATGATTCACTCCATGGACT
AAAATCACCGCCC---------------TGCCCCCTAACCACATGTTCTTGCTGTAAATTTGCCTGACACTCTCTCATGG
AACTGTAAATTTTAACC--------------TTTCCTTCGGGAAGGAGTCTCGATCGATCCTGCGCCATTCAAGCGCATT
GGGCGTGGGATCCATTCCATTAAACTGCAGAGAGTTTTAATGGCCGCACAGTGAAACTGCGTCCCTTTCCCTATCATCGC
CTTCAATGAGCCAGCCACCAGCTCGCCATTGCCGGTCCTTCTCCTCCCCCCCATTAATGGCGAAACTGTCCATGGTCTTT
TCTGGGGCCTGAACGTGCTTGTGGTGCCTCTGCTCTCGCCTTGTCGCTCGCGTCGTTCCGTTCCTCCTCC-CCCCCTGCC
GCGTGCTCACGTTAATGGCTTCATAGCTACACCTCATCTTCCTCCTCGCCTTTATTCTCCCCGAGCTTTAATGGCGTTTG
GTGGCTAAAACGGCCGGTAGCTTCTCGCCATTAAAAAGATTAGATTGTTCCTCTGGAAAGGACCTGATCTCCCTTTTGGT
GCCCGCATTAACTCGGCATCTTGAGTGGGTGCGGATTGCTCCTGTGTAGCACGCTGTCCTTGGATTCTTCTTCCGCTAGT
ACCCCTGCTAATCTATGCGTGGCGTGCTTCATTAATTCCATGGCGTACTCGTTCTCATTTGTTGTTGGATGATTGGCAGG
ACGCTCTTGCACCGTTCAGCCGCAGGATCAAGAATCTGTCCGGGGAGGAGCTGGTCGGAGCTGCGGCGTCGCCTCGTCGC
AGACTAGTGTTGCACGGCTTCCCCGGCGGCGCCGAGGCGTTCGAGCTCGTCGCGAGGTTCTGCTACGGCGGCGGCGGCGG
AGTGACGGTCACCGCGGCCAACGCCTGCGCGGTGCGGTGCGCGGCACAGTACATGGAGATGGGGGACGCGCCCGCGG---
---------CCACCGCCCCGAGTTTGGCGAAGGTGGCCGATAAGGCGCTGGAGGATATGCCGCACTGGCCGTGGCAGTGC
GTGGTGGACGCCGTGAAGCAGTGCCAGAGCCTCTTCCCGCTGGCCGAGTCCACCGGGGTGTTCGACAAGGTCGTCGGCGC
GCTGCTGGCCCAGATGGCCATCCCTGCCCCTGGCGACGCCACCCCGACGAGCTCCTCGCCGGAGAGCTCGGCGTTCCGCT
TCTCCTGCGATACCAAGTGCAGCAGCCTCAGCCTGCGCCGCACCTGGTGGTTCGAGGACCTCGTCGTCCTCAGCCCCGGC
ATGGTGGAGCGCGTGGCCAAGGCGCTCCTGGCCAGGGGCGCCGACCACGGCATCGTCGCCCGGTTCCTCTTCTACTACCT
CAAGTGCCGCATCGCCGGCGCCAGCGCCGAGGACAAGAGGGCGATGCTGGAGGCGGCGATCACCGTCATTGCCGACCTCG
ACCGGAGTTCGGTTTCTTGCAAGGGCCTGTTCGGCATCCTGAGGATCGCCTCCCCTGTCAAGCTGGCCGCCGGTTGCCAG
GAAATGCTCGTGGCCATGATAGGCCGCAAGCTCGACCACGCGACGCTCGACAACCTGCTCGTCCAGGCGCCGTCCGGGAC
GGGCAGCTTGTACGACGTGAGCCTGGTGCTCAGGTTCCTGGAGGCGTTCCTGCGCCACGGCGACGAGCCGGGGAGGCTGA
AGAAGGTGGGTGAGCTCATGGACCTGTACCTGGCCGAGGTCGCGCCGGACCCGTCGCTGCGGCCGGCCAGGTTCGTCGAG
CTGGCCACCGCGCTGCCCGCCGCCGCGAGGGACTGCCACGACGCGCTGTACCGCGCCATCGACGTCTACTTCCAGGTACT
ACATTCTCCGCAGAGCTCAGGGATGTCAGAAGCAGAATTGAGTTGCACAGTGCATCACATTGATTGCTCGAGCTGAAAAA
AAAAATAACTCTGTCCCGTTCATTCATGGCCGCAGGTCCACGGCCGACTGACGGACGACGAGAAGATGAAGATCTGCAAG
GGCATCAACTACGAGAAGCTGTCGCCGGAGTGCTGCAAGCACCTGGCGACCAACTCCGGCTTCCCAACGAGGGCGGCGGT
GCAGGCGCTGGCGTCCCAGCACACGGTGCTCAAGGGCATCATCCGCCACTCTGGCCCCTTGAAGCCGGCGTCGCCCCCGC
CACCTCCGGCCGCCCATCGCGAGAGCTACGACGACGCCGACGGCGACAACAACGGGCAGGTGGTCCTGTACGCGAGCAGG
CTGGAGCTGACGCTGGAGAACCAGAACCTCAAGTCGCTCCTGGACAGCATGCACTGGCGGGTGATGGAGCTGGAGAAGGT
GTGCAGCCGGATGAAGACGCAGATGACGAAGATGAAGGCCTCCCGGCGC------GGAGGAGGCGCCGCCGCCGCGAGAT
CACTCCCCAGGATGTGTTCTTGATCGTCCCATTTCACTCTGCACATTAGTGAATGTACATACTGCTAGGAGCAGCTGCAG
CGTCCTGTTTTCTGTTCTTTTTTTTGCTTCACTTTTGTCAATTTTTAA---TGTATCGATTCCTGGTGATTGATCTAATC
TGATGTGGGTGGAGCT-GGGGAATCTCTTCTTGTTGCATCTCAGTGAACAGATGATCGAATAACCAACAACCTTATCAGA
AATGTAAGT-AAGATTCCAAGTACAACTGCTACATTTTTTAGGGTACTGACTATGCCACGACCACGTCTTGCAATCTACA
AAAACAATTCAATCCATGACCTCGATAGATCAACAGGGGATAAACAAATCCTCCGGGATGTCGTGGTTAAGTTACTTGTT
AACCTCTAAGAACGTGCAGC-----GTAAAGCGTGATCAAGCAAAAAAG-AAGATGACATCAT--GGCGGCCAAGGTCAG
GGGAACAGTTGACTTGTAGACCGTAGATTAACAGCCCGGGGTTAAAGATTGATGTTACAGTGTTTGGAAAGCAAGGACAC
CTCTGACCGTCTGATATGGCTCGAGACTTTGAGTGGCAAAGAACATGGGCCATTGGGTCTTTCTAGCTTGGCAATTGGCA
GGGACTTTCTCCCTTGGTTTTTGGATGCTCTTTGAGAGACTAAAACAAGATTTGAATGTGGAGTGTGCAGTGTCCAACCT
CCCGCATGTGGTTGTCTAGTCATGCTTCCGGTTACTTTTCATTGCATTTGTGCCTTCCTCATGCTTCCAGTTACAGCAGA
ATATATAATTCTTCAATTCTAGCTCACCTTTTGCTTCTGTGCCTTGATATAAACTTTTTGTG------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>SNPs
--------S--------------------S-----------S----S-----------S----S------SSS-SSSS--
--S-----------------------------S-----S-S-----S---------------S--------------S--
-------------------------------------------------------S-----S------S-----------
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-------------S--------------------------------S-S--S-S---------------S-SSSS-----
--------------------------------------------------------------------------------
------S----------S-------------------------------------S------------------------
----------------------SS---------S-------S--------------------------------------
------------------S-S-------------------------------------S---------------------
--------------------------S-----------------------------------------------------
----------------S-----------------------------------------------------S---------
--------------------------------------------------------------------------------
-------------SSSSSSSSSSSSSSSS-----------------S---------------------------------
-----S--------------------------------------------------------------------------
-----------------------------------------------------------------SSS------------
------------S---------------------------------------SSS-S--------S--------------
-----------------------------S--S-----------------------------------------------
------------------------S--S-----------------S----------------------------------
------------------S-------SSS-------S----------------S-S---------------S--------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------SS-SSSSSSSSSSSSSSSS------------------------------------------------S--S
---------------S--S-------------------------S-SSSSS-----S---------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S-S--------
------------------------------------------S-------------------------------------
--------------------------------------S-----------------------------------------
---S----------------S------------------S------S--------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
-----------------------------------------S--------------------------------------
--------S------------------------S----------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
-----------------------S------------------------------S-------------------------
----------S---------------------------------------------------------------------
-----------------------------------------------------------S-----S-----------S--
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
-----------------S--S-----------------------------------------------------------
---------S----S--------------------------------------S--------------------------
-------------------------------------------S------------------------------------
-----------------------------------------------S--------------------------------
---------------------------------------------------------------S----------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------SSSSSS-----S-------------------
--------------------------S------------------S----------------------------------
-----------------------------------------S------------------------S-------------
---------S------S--S-------------------------------------S------S---------S-----
---------S----------------------------------------------------------------------
-------------------------S--S---S--S--------------------------------------------
------------------------------------------------SS------------------------------
-------------------------S--------S---------------------------------------------
--------------------------------------------------------------------------------
---S-------S--------------------------------------------------------------------
---S---------------------------------------S--S---------------------------------
---------------------S------S--------S------------------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS
>forward_1899
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---------------------------------------CCCCTCTTCGTCTTCAACCC---------------------
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>reverse_3643
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------------------------------------------AGTGTAGCACGCTGTCCTTG------------------
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>forward_2667
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-------CCTCTAGGGGGTGATGACCA-----------------------------------------------------
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>reverse_3719
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--------------------------------------TATGGCGTGCTCGTTCTCAT----------------------
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>forward_2669
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---------TCTAGGGGGTGATGACCAGG---------------------------------------------------
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>reverse_4169
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--------TTCAGATGGCCATCCCTGC-----------------------------------------------------
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>forward_3059
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-------------------------------------------------------------------------------T
AAAATCACCCGCGCTGTCT-------------------------------------------------------------
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>reverse_4491
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----------CGTTTCTTGCAAGGGCCTG---------------------------------------------------
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>forward_3764
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----------------------------------------------------------------TTGGATGATTGGCAGG
ACGT----------------------------------------------------------------------------
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>reverse_5610
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---------CGGAGCTTGGCGAATCTGTT---------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
