>input_sequence_25047
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-------------------------------------------------------------------------ATGGCGC
AGCTTTTGTGGCTGGCGCTCGGGGTTCTTCTTCTGGCCAGCTCGGTGGCAGACGCGGCGACTGCCAATTACACGTTCACA
GTACTTCTCTTTACCTTCTCTCCGTCCATGCATAAGAG-TTTTATTCATTCAGTTCATCTGAAGTTCATAGATAGAAGCT
TTTCGCA---ATAAGTGAACTAGAGCAACTTCGCCATGCCCATATGTATATGCTCACATACGCCGGCTAGCGGCAACTTA
CATG------CTTGACTTACAGTGGCTATCTAGAATTCAGAGTCAACCTATATGTTCAGAAAACAGAGA-----------
-TAGACCTGAAAATGTAGATAAAGTTGATAG---------------------TTCTGTAGGAGAGTTGATAGTCATGCAG
GACAGTTCTATACCTATTTTTCATGTATATGCCACAAAAATCTCTACTTG--TACTTCGGAATCGTGTATACAGTCCTAC
AAGCCCTTGTCTGACGTCTTTGTTCCTCTGTAATGCTGCCACCAGGTGCAGAGCATGAAAATTAACCAGCTGTGCAACAG
CACTGACATCATTGCGGTGAACGGCCAGCTGCCAGGCCCGACGATAGACGTGTTCGAGGGCGATGAGGTGGTCGTCGATG
TGATCAACGCGTCGCCGTACAACTTAACCATCCACTGGTAAAATCCTTATACCCCAGCTACAGAAAACTTTCAATGTCTG
AAACTCTGTTCTTCGAAAAACATAGAGCC-----------GTCTGCAACCGTTCCAACGGCGGCGTGGGGTACCCGC---
-TGTCATCTAGCCTCTTGTTTTTTGAATCAAGCTGTCATCTAGCTAGTTCGCAGGACTGTTGAGGTGTCAGCCTGACAGG
CAGTTTAGTTTCTCAGAAGATTAGTTTGTCTGACTATCTTAGCACCCGTGTGGCCGTGTGCCCATATCTCTAAGCCGAAA
GGGAAGGTTCTGAAAATGACACCCTACCTTCCGAGGCACCGCCGTTAACTGTAGGTGACCTCATCTTAACACCCTCCAAG
TGTGCACACCGCAGTGTTCAGACGACCAAGTCTCGTCATTACAG--------------------------------TACA
CGTTTACAACAAAACGTAGCCAAAAGGATCACACAAAAAACAGCTAAACTTACCGGCTACCCATTCAAACATATATATTT
TTAGGATAACATATTTGTTTCTGTCTTTCACGCTGTCTTTTTTCCTCTGGCAAAGACAACTGAGGTCGGCACTAAGTTTC
AGTGGTCGGCACTTGACTCTGCCGCCATCTGTTATGATT--TGTGGTGCTAGGGATTCAAATTTAACTGAAAAAATTAAC
TGATCTTTGGCGGCAGGCACGGCATACTCCAGAAGCTGACGCCATGGGCGGACGGGCCGAGCATGGTGACGCAGTGCCCG
ATCCAGCCCAACGGCTCCTACACGTACCGGTTCAACGTGACGGGGCACGAGGGCACGCTGTGGTGGCACGCGCACTCCTC
CTTCCTGCGCGCCACCGTGTACGGCCCCCTCATCATCCGCCCCCGGAACGGCACCGCCTACCCCTTCCCGGCGCCGGACC
AAGAGGTCCCCGTCGTACTTGGTATAATCAT---CAATCAACACGCATATACCATTCCTGTCCATTGCTCGATAGTATAT
T-------GATGGATGGATGGGGAGGTTTTAATTTGGCATATCCTGGTTGTGGATGAGGTTTGGGACAGGCGAGTGGTGG
AGCCAGAATGTCGTCGACGTCGAGAAGGACGCCGTCATGGCCGGCCAGCTGCCCAGCCACTCCGACGCCTTCACCGTTAA
CGGCCTCACCGGCCAGCTCTACCAGTGCGCAAGTATGTAACGCG---TCAGACGGTGAATTCTGTAACTTCAGGTGAAAT
TTACAG-CTGATGGTGATGTGTGACATCATTAATTTGGTTCC----GTAGATGAGACGTTCACGGCGGTGGTGCAGCCCA
ACACGACGGTGCTGCTCCGGGTGATCAACGCCGCGCTCAACACGCACCTCTTCTTCAAGGTGGCCGGCCACAACTTCACG
GTGGTGGCCGTGGACGCCTGCTACACGGCCAACTACACCACGGACACGCTGGTGCTGGCGCCGGGGAACACCGTGGACGC
GCTCGTCTATACGGGCGCCGCGCCGGGGAGCTACTACATGGCGGTGGAGCCGCACCACACGCTGTCGCCCGCGGCCACCA
CGGACGCCTCCGACGGCGGCTCCGTCGCCACGGGCATCCTGCTCTACAACGGCACGTCGGCCACGGCGACGCCCGCCATG
CCCACTATGCCGAACAACTCGGACTCGACGACGGCCAACGACTTCTACTTCGGGCTGCGGGGCCTGCCCGCGGCCGTGCC
GTCGCCGGTGGACGTGAACATGACCATCCAGCTGGGGCTGGGCCAGCTGCCGTGCGACGCGGCCCAGACCAACTGCTCCG
TGAACGCCTTCGCAGCGGCGATGAACGGGGTCTCGTTCCGCCTGCCCACGCAGATGTCGCTCCTGGAGGCGCAGTTCGGC
AACGCGTCCGGGGTGTACACCGCCGACTTCCCCGACGGCGTGCCACCCAACGGCACGGCCATGGTGGAGGGCACCAAGGT
GAGGAGCCTGCCCTACAACTCCACGGTGGAGATCGTGCTGCAGAACCCTATGGCCTTCCCGTCGGAGAGCCACCCGATCC
ACCTCCACGGCTTCAACTTCTTCGTTCTGGCGCAGGGGCTCGGCACCTTCGCCCCGGGCAACACCAGCGCCTACAACCTG
GTCGACCCCGTGGCCCGCAACACCATCGCCGTGCCCGCCGGAGGCTGGGCCGTCATCCGCTTCGTCGCCAACAACCCAGG
TACCGTTACCGTGCTTTCCATACATACGTTTCTCCCTATTTCGGCCCAAACTATATGGGCCTTGATTTTAACAG----TG
TTAATAATTTGATGTTTGGGCTTTGACGCGTGTAGGCATGTGGTTCTTCCACTGCCACCTGGACGCGCACGTTCCGATGG
GGCTCGGGATGGTGTTCGCGGTGGAGAACGGGACGACGGCCGACTCCATGCTGCCTCCGCCGCCGGCTGATCTGCCCATG
TGCTAG--------------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G397200
TTTGGGTTGGGCGTCCC------TGCAGCCCAACAGGAGATTTTGTTTGTTCGGAAAGGTATAACTTGTGGGCATAATCC
TCCATTTTTGTCCGCTGTTGACGTGTTAAGCGTATCCGACGGAATGTGTATCAATGCAAGTGCTCTCTGGATTTAGCCAT
TTG-GGACCAAACCGCCTTCTGGCATAGATAATTGAGTGTCGGACCAAATTATTGTGCACATGACAACAACTTCAAAGCC
CTCACTGGCCAGGCTGCTAGTTCAGGTGCGGATGGGATACTCGCGCTTGTACGCTACTACACCTCAGCTTTGAGAGATGC
TTTCATTGACCCAAACGAGGGATCAGCAGGGACACTCTGAGACATGTGATTAGTCCATTTTGGAATGCAGAAATTTC-TC
CCATCCAGTTATTTAGCTATGTTGTCACGTTAACATGATAGTTCGTCAGAAAACAATATATCCTGTGTCC--AAAAGTAA
AACTCCTGATTGCATCCGATGAAAACGGCATT-TTTCGCCGACGTGTCGCCATATGCCAGCCGAGAAAGATGATTCGACG
GTGCTCCTCGGATATAGAC-----CAGGATTGATTTCGGCACTGCAAATCAAACCTATCCACGAAACGAGCTAATTATTC
AGAGGACTGTCGACAAGCCGAGTGGCATAAAAACCTCCCCATCAGACCCACCGGGCCGCATAAAACAATCCGGGTCATCA
ACACCTAGATTACGAGCGTGTGAGCGCGCGACATCGCCAGAAGCTTTACGTCGCGGTCGCGCAAATTTAAATGGGAAAAG
AGGGGGC--AAATATGCCAGTCGGACTGAGCTACGCAAGTGATTCCTCCC---GGAGGAGCGCCAAAAGCATCCCTATAG
TATATATACCTATCGTGTTTCTTGGAAGACTTTGAGCAATACAAGTTGCCCGGTCAG-GATCGCCAAAGAAAGATTTGCC
TTTCCCTCTCTCTGA--------CACCACCGCTGGTGAATCGTCTTCAACCTCGGC---CTTCCTCTTCTTCCATGGCGC
AGCTTTTGTGGCTGGCGCTCGGGGTTCTTCTTCTGGCCAGCTCGGTGGCAGACGCGGCGACTGCCAATTACACGTTCACA
GTACTTCTCTTTACCTTCTCTCCGTCCATGCATAAGAG-TTTTATTCATTCAGTTCATCTGAAGTTCATAGATAGAAGCT
TTTCGCA---ATAAGTGAACTAGAGCAACTTCGCCATGCCCATATGTATATGCTCACATACGCCGGCTAGCGGCAACTTA
CATG------CTTGACTTACAGTGGCTATCTAGAATTCAGAGTCAACCTATATGTTCAGAAAACAGAGA-----------
-TAGACCTGAAAATGTAGATAAAGTTGATAG---------------------TTCTGTAGGAGAGTTGATAGTCATGCAG
GACAGTTCTATACCTATTTTTCATGTATATGCCACAAAAATCTCTACTTG--TACTTCGGAATCGTGTATACAGTCCTAC
AAGCCCTTGTCTGACGTCTTTGTTCCTCTGTAATGCTGCCACCAGGTGCAGAGCATGAAAATTAACCAGCTGTGCAACAG
CACTGACATCATTGCGGTGAACGGCCAGCTGCCAGGCCCGACGATAGACGTGTTCGAGGGCGATGAGGTGGTCGTCGATG
TGATCAACGCGTCGCCGTACAACTTAACCATCCACTGGTAAAATCCTTATACCCCAGCTACAGAAAACTTTCAATGTCTG
AAACTCTGTTCTTCGAAAAACATAGAGCC-----------GTCTGCAACCGTTCCAACGGCGGCGTGGGGTACCCGC---
-TGTCATCTAGCCTCTTGTTTTTTGAATCAAGCTGTCATCTAGCTAGTTCGCAGGACTGTTGAGGTGTCAGCCTGACAGG
CAGTTTAGTTTCTCAGAAGATTAGTTTGTCTGACTATCTTAGCACCCGTGTGGCCGTGTGCCCATATCTCTAAGCCGAAA
GGGAAGGTTCTGAAAATGACACCCTACCTTCCGAGGCACCGCCGTTAACTGTAGGTGACCTCATCTTAACACCCTCCAAG
TGTGCACACCGCAGTGTTCAGACGACCAAGTCTCGTCATTACAG--------------------------------TACA
CGTTTACAACAAAACGTAGCCAAAAGGATCACACAAAAAACAGCTAAACTTACCGGCTACCCATTCAAACATATATATTT
TTAGGATAACATATTTGTTTCTGTCTTTCACGCTGTCTTTTTTCCTCTGGCAAAGACAACTGAGGTCGGCACTAAGTTTC
AGTGGTCGGCACTTGACTCTGCCGCCATCTGTTATGATT--TGTGGTGCTAGGGATTCAAATTTAACTGAAAAAATTAAC
TGATCTTTGGCGGCAGGCACGGCATACTCCAGAAGCTGACGCCATGGGCGGACGGGCCGAGCATGGTGACGCAGTGCCCG
ATCCAGCCCAACGGCTCCTACACGTACCGGTTCAACGTGACGGGGCACGAGGGCACGCTGTGGTGGCACGCGCACTCCTC
CTTCCTGCGCGCCACCGTGTACGGCCCCCTCATCATCCGCCCCCGGAACGGCACCGCCTACCCCTTCCCGGCGCCGGACC
AAGAGGTCCCCGTCGTACTTGGTATAATCAT---CAATCAACACGCATATACCATTCCTGTCCATTGCTCGATAGTATAT
T-------GATGGATGGATGGGGAGGTTTTAATTTGGCATATCCTGGTTGTGGATGAGGTTTGGGACAGGCGAGTGGTGG
AGCCAGAATGTCGTCGACGTCGAGAAGGACGCCGTCATGGCCGGCCAGCTGCCCAGCCACTCCGACGCCTTCACCGTTAA
CGGCCTCACCGGCCAGCTCTACCAGTGCGCAAGTATGTAACGCG---TCAGACGGTGAATTCTGTAACTTCAGGTGAAAT
TTACAG-CTGATGGTGATGTGTGACATCATTAATTTGGTTCC----GTAGATGAGACGTTCACGGCGGTGGTGCAGCCCA
ACACGACGGTGCTGCTCCGGGTGATCAACGCCGCGCTCAACACGCACCTCTTCTTCAAGGTGGCCGGCCACAACTTCACG
GTGGTGGCCGTGGACGCCTGCTACACGGCCAACTACACCACGGACACGCTGGTGCTGGCGCCGGGGAACACCGTGGACGC
GCTCGTCTATACGGGCGCCGCGCCGGGGAGCTACTACATGGCGGTGGAGCCGCACCACACGCTGTCGCCCGCGGCCACCA
CGGACGCCTCCGACGGCGGCTCCGTCGCCACGGGCATCCTGCTCTACAACGGCACGTCGGCCACGGCGACGCCCGCCATG
CCCACTATGCCGAACAACTCGGACTCGACGACGGCCAACGACTTCTACTTCGGGCTGCGGGGCCTGCCCGCGGCCGTGCC
GTCGCCGGTGGACGTGAACATGACCATCCAGCTGGGGCTGGGCCAGCTGCCGTGCGACGCGGCCCAGACCAACTGCTCCG
TGAACGCCTTCGCAGCGGCGATGAACGGGGTCTCGTTCCGCCTGCCCACGCAGATGTCGCTCCTGGAGGCGCAGTTCGGC
AACGCGTCCGGGGTGTACACCGCCGACTTCCCCGACGGCGTGCCACCCAACGGCACGGCCATGGTGGAGGGCACCAAGGT
GAGGAGCCTGCCCTACAACTCCACGGTGGAGATCGTGCTGCAGAACCCTATGGCCTTCCCGTCGGAGAGCCACCCGATCC
ACCTCCACGGCTTCAACTTCTTCGTTCTGGCGCAGGGGCTCGGCACCTTCGCCCCGGGCAACACCAGCGCCTACAACCTG
GTCGACCCCGTGGCCCGCAACACCATCGCCGTGCCCGCCGGAGGCTGGGCCGTCATCCGCTTCGTCGCCAACAACCCAGG
TACCGTTACCGTGCTTTCCATACATACGTTTCTCCCTATTTCGGCCCAAACTATATGGGCCTTGATTTTAACAG----TG
TTAATAATTTGATGTTTGGGCTTTGACGCGTGTAGGCATGTGGTTCTTCCACTGCCACCTGGACGCGCACGTTCCGATGG
GGCTCGGGATGGTGTTCGCGGTGGAGAACGGGACGACGGCCGACTCCATGCTGCCTCCGCCGCCGGCTGATCTGCCCATG
TGCTAGAGCACGCAAGTTTCCA----GCGCGATTTCGTCATGATCCTGCGTGCAAGTTTACAGATTTAATTGTTCTTTGT
GTGTGTAAAAAAACGCGAGAGGCGA-----CGGAGCGTATACGTGTGCAGGGCCGTTGGTTGATTTGT--CGCG--TGTT
TACGGTGAACGTGTACATGAATTGGGTTTGGTGTAACAACGTTCTCTTTCTTTGGTGTAAATACCAA--ATGATTCAATT
TCAGAGGTTCATTTCCTACC-GAGTACT----------------------------------------------------
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-----------------------------------------------------GTACTGATCGGCGTGCATGCATGACGT
TCTCTTCCTTTGGTGTAACTATATGCCAACGATCGAACTTCAGAGGTTCGTATCATTCTGACGGTGCATAAAGATACTAG
TACACGATTGCATATCGT-ACTGATTGGAGTGCATGACGATGGC-ATCTTTGAATTTCAATACGTTGATTGATCGGAGAA
--------TATC--------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TAGCGAGCTGGATGAGATGCTACACATGCATCGGCAGATTGGCTGCTTGGCTTACCTGGAGCTG
GAGGGCAACAACTTGAAATGCGAGCTCGTCACCAGAGGACAAAGTCGTCTTAGTGACGACTTTGCTGCCGACTTGCCTCC
TGTTTCTTTCTGCAAAGTGCCGTCGTCGGTAACGCGTTGCGCTGCTCATGCAGTACCCATCCACGCGGGTTTCCTAGGCT
ATAGGCTGCTTTGGTCTTGACGTCTTGTGAATACAAATCATCAATACGATGTTGACAGAATAC---TACGAGAATATGTA
ACCGAGTGTCCGGTCTCATTTTGTGAATTATTCAGGACTCATTCGGTTTATAGGGTATTTAAATCAACGGAATAGGGAAA
GTAAGGAAATTGTGTCCATATTGACATTATTCCTGTGAATTCCT--AATATTAAATTAGACCTCATGAAAAATTCCTAAA
GTTTAAAGAGG---------------------------------------------------------------------
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-----------------------ATAGACCTAAGTTTAGGTCAACTTTGTAGTTATCTTTT-------------------
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------------------------------------------------------------------CGCATAGATCTTGA
TTCATAATGATGAAATTGTGTGATCAGTTGCTATGTATTTTTG
>chr3D_1
TTTGGGTTGGGCGTGTTCCTGCATGCAGCCCCACAGGGGATTTTGCTGGTTCAGAAAGGCATAACTTGTGGGCATAATCC
TCTACTTTTGTCCGCTGTCGACGTGTTAAGCCCATCCGGCGGAATGTGTGTCAATGCAAGTGCTCTCTGGATTCGGCCAT
TTGGGGACCAAACCGCCTCCTGGCATAGATAATTGGGTGTCGGACCAAATTATTGTGTAGATGACAACAACTTCAAACCC
CTCACTGGCTGGGCTGCTAGTTCAGGTGCGGATGGGATACTCGTGCTTGTACGCTACTACACCTCAGCTTTGAGAGACGC
TTTTATTGACACAAATGAGGGGTCAGCAGGGACACTCTGAGACATGTGATTAGTCCATTTTGGAATGCAGAAATTTT-TC
CCATCCAGTTATTTAGCTATGTTGTCACGTTAGCATGATAGTTCGTCAGAAAACAATATATATCCTGTGCCGAAAAGTAA
AACTCCTGATTGCATCCGATGAAAACGGCATTTTTTCGCCGACGCGTCGCCATATGCCAGCCGGGAAAGATGATTCGACG
GTACTCCTCGAATATAGACCAGCCCAGGATTGATTTCGGCACTGCAAATCAAAGCCATCCACGAGCT-AGCTAATTAGTC
AGAGGACTGTCGACAGGCCGAGTGGCATGAAAACCTCCCCATCAGACCCACCGGGCCGCATAAAACAATCCGGGTCATCA
ACACCTAGATTACGAGCGTGTGAGCGCGCGACATCGCCAGAAGCTTTACGTCGCGATCGCGCGAATTTTAATGGGAAAAG
AGGGGGCGCAAATATGCCAGTCGGACTGAGCTACGCAAGTGATTCCTCCCGGAGGAGGAGCGCCAAAAGCATCCCTATAG
TATATATACCTATCGTGTTTCTTGGAAGACTT-GAACGATACAAGTTGCCTGGCCAG-GATCGCCAAAGAAAGATTTGCC
TTTCCCTCTCTCTGAGACTCTGACACCACCGCCGGTGAATCGTCTTCAACCTCGGAATTCTTCCTCTTCTTCCATGGCGC
AGCTTTTGTGGCTGGCGCTCGGGGTTCTTCTCCTTGCCAGCTCGGTGGCCGACGCGGCGACTGCCAACTACACCTTCACA
GTACTTCTCTTTACCTTCTCTCCGTCCATGCATAAGCG-TTTTATTCATCCAGTTCATCTGAAGTTCATAGATAGAAGCT
TTTCGCA---ATAAGAGAACTAGAGAAACTTCGCCATGCCCATATGTACATGCTCACATACGCCGGCTAGCGGCAACTTA
CATAGGAGTACTTGACTTAGAGTGGCTATCAAGAATTCAGAGTCAACTTATATGTTCAGAAAACGGAGAATGCATAGACG
ATAGACCTGAAAATGTAGATAAAGTTGGTAA---------------------TTCTGTAGGAG-----------------
---AGTTCTATACCTATTTTTCTTGCATATATGCCACCAAATCTATCTAGTATACTTTGCAATCGTGCATACAGTCCTAC
AAGCCCTTGTCTGACGCCTTTGTTCCTCTGCAATGCTGCCACCAGGTACAGAGCATGAAAATCAACCAGCTGTGCAACAG
CACTGACATCATCGCGGTGAACGGCCAGCTGCCAGGCCCGACGATAGACGTGTTCGAGGGCGACGAGGTGGTCGTCGATG
TCATCAACGCGTCGCCGTACAACTTAACCATCCACTGGTAAAATCCTTA-ACCCCAGCTACACAAAACTTTAAATGTCTG
AAACTCTGTTCTTCGAAAAACATAGAGCCAACATAGAGCCGTTTGCAACCGTTCCAACGGTGGCGTGGGGCACCTGCTGT
GTGTCATCTAGCCTCTTGTTTTT-GAATCAAGCTGGCATCTAGCTAGTTCGCAGGACTGTTGAGGTGTCAGCCTGACAGG
CAGTTTAGTTTCTG---AGATTAGTTTGTCTGACTATCTTAGCACCCGTGTGGCCGTGTGCCCATATCTCTAAGCCGAAA
GGGAAGGCTGTGACAATGACGCCCTACCTTCCGAGGCACCGCCGTTCACTGTAGGCGACCTCATCTGAACACCCTCCAAG
TGTGCTCACTGCAGTGTTCAGACGACCAAGTCTCGTTATTATT-------------------------------------
--------ACAAAACGTAGCCAAAAGGATCACACAAAAAACAGCTACACTTACCGGCCACTGCACTCGAGAAACATTCA-
-------AACATATTCGTTTCTGTCTTTCACGCTGTCTGTTTTCCTCTGGCAAAGACAACTGTGGTCGGCATTAAGTGTC
AGTGGTCGGCACTTGACTCTGCCGCCATGTG--------------GTGCTAGGGATTTGAAT-------------TTAAC
TGATCTTTGGCGGCAGGCACGGCATCCTGCAGAAGCTGACGCCATGGGCGGACGGGCCGAGCATGGTGACGCAGTGCCCG
ATCCAGCCCAACGGCTCCTACACGTACCGGTTCAACGTGACGGGGCACGAGGGCACACTGTGGTGGCACGCGCACTCCTC
CTTCCTGCGCGCCACCGTGTACGGGGCCCTCATCATCCGCCCCCGCAACGGCACCGCCTACCCCTTCCCGGCGCCGGACC
AAGAGGTCCCCGTCGTACTTGGTAATCA----------------GCAGATACCATTCCTGTCCATTGTATGATAGTGCTG
TATT--------GATGGATGGGGAGGTTTTAATTTGGCATATCCTGGTTGTGGATGAGGTTCCGGACAGGCGAGTGGTGG
AGCCAGAATGTCGTCGACGTCGAGAAGGACGCCGTCATGGCCGGCCAGCTGCCCAGCCACTCCGACGCCTTCACCATCAA
CGGCCTCACCGGCCAGCTCTACCAGTGCGCAAGTATGTATTACCGTCTCAGGCCGTGAATTCTGTAACTGCAGGTGAAAT
TTTATGACTGATGCTGATGTGTGACATGATTCATTTGGTTCGTACTGTAGATGAGACGTTCACGGCGGTGGTGCAGCCCA
ACACGACGGTGCTGCTCCGGGTGATCAACGCCGCGCTCAACACGCACCTCTTCTTCAAGGTGGCCGGCCACAACTTCACG
GTGGTGGCCGTGGACGCGTGCTACACCGCCAACTACACCACGGACACGCTGGTGCTGGCGCCGGGGAACACCGTGGACGC
GCTCGTCTACACGGGCGCCGCGCCGGGGAGCTACTACATGGCGGTGGAGCCGCACCACACGCTGTCGCCCGCGGCCACCA
CGGACGCCTCCGACGGCGGCTCCGTCGCCACGGGCATCCTGCTCTACAACGGCACGTCGGCCACGGCCACGCCCGCCATG
CCGGCCATGCCCAACAACTCGGACTCCACGACGGCCAACGACTTCTACTCCGGGCTGCGGGGCGTGCCCGCGGCGGTGCC
GTCGCCGGTGGACGTGAACATGACCATCCAGCTGGGGCTCGGCCAGCTGCCGTGCGACGCGGCCCAGACCAACTGCTCCG
TGAACGCGTTCGCGGCGGCGATGAACGGCGTGTCGTTCCGGCTGCCCACGCAGATGTCGCTCCTGGAGGCGCAGTTCGGC
AACGCGTCCGGGGTGTACACAGCCGACTTCCCCGACGGCGTGCCGCCCAACGGCACGGCCATGGTGGAGGGCACCAAGGT
GAGGAGCCTGCCCTACAACTCGACGGTGGAGGTCGTGCTGCAGAACCCGATGGCGTTCCCGTCGGAGAGCCACCCGATCC
ACCTCCACGGCTTCAACTTCTTCGTGCTGGCGCAGGGGCTCGGCACCTTCGCCCCGGGCAACGCCAGCGCCTACAACCTG
GTCGACCCCGTGGCCCGCAACACCATCGCCGTCCCCGCCGGGGGCTGGGCCGTCATCCGCTTCGTCGCCAACAACCCAGG
TATATAA-----CCCT-------------------CCATTTCGGCCCAAATGATATGGGCCTTGATTGATTTTGCCGCTG
CTGATGATTTGGTGTTTGGGCTT--------GTAGGCATGTGGTTCTTTCACTGCCACCTGGACGCGCACGTCCCGATGG
GGCTCGGGATGGTGTTCGCGGTGGAGAACGGGACGACGGCCGACTCCATGCTGCCGCCGCCGCCGGCGGATCTGCCCGTG
TGCTAGAGGACGCGCGCAAGTTTCCAGCATGATTTCATCATGATCTTGCGTGCAAATTTACAGAATTAATCGTTCTTTGT
GTGTGTAAAAAAACGCGAGGGGCGA-----CGGATTGTATACGTGTGCAGGGCCGTTGGTTGATTTGT--CGCGCGTGTT
TACGGTGAACGTG-ACATGAATTGGGTTTGGTGTAACAACGTTCTCTTTCTTTGGTGTAAATACC-A--ATTATTCAATT
TCAGAGGTTCATTTCCTACC-GAGGTGTACATACTGTACACATGATGATTGAATACGTACTGTACTGATCGAAGTGCATT
TTTTTTCAAAAGGGGATCTCCTCGGCCTCTGCATCAGAATGATGCATACGGCCATCTTATTAACGAAATAAAAGGTTCCA
ACAAGGTTTCAAAGTCTCCGACTGAAAAGAAATAAAAAGACAGCTCACACAGAGCTAAAGAGGCTGAGCACACAGACTAA
CCAAGATAAGACGCCACAACCGGCTGGCTAAAAATAGATAGGTAAACTAATTGCCTATCCTATTAGATGACCGCCATCCA
AACCGGTTGAAGATATCCCGAGCTACCATCTCCCAGCGGATAGATCCAGTAACCAAATGCTCCCTGGCCTCCATCGGAGT
GAGTAGCGACCATGAACGGATCACGGCCGTGGCTCGGAAAATAACCTGCAAAAAATGAATACGTGATATTCTGTTAAAGA
CCAAATCATTTCTGCAAGTCCAGATAGTCCACAACAAAGCGCAAACTCCAACACGAATATGTCTCGCTAATTCAGGCTCA
ATCCCAGTGAGCCATGTCCCAAATAACATAGTGACAGAATTCGGTGGAGTAATATTAAAAGCAATGTGGACCCTCCGCCA
AAGTACTCTGGCAAACGGGCAATCAAAAAAGAGACGTTTGATCGTCTCGTCTCGTCCTGATCGGAGTGCATGCATGACGT
TCTCTT-CTTTGGTGTAAATATATGCCAACGATTGAACTTCAGAGGTTCGTATCCTTCTGACGGTGTATAATAGATACC-
-ACAAGATTGCATACTGTAACTGATTGGAGTGCATGGCGTTGGCG-TCTTTGAATTTCAATACGTTGATTGAATCGGAGA
GTATCTACTATC--------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TAGCGAGCTGGATAAGATGCTAGGCATGCATCGGCAGATTGGCTGCTTGGCTCACCTGGAG---
---GGCAACAACTTGAAATGCGAGTTCGTCACCAGAGGACAAAGTCGTCTCAGTGACGACTTTGCTGCCGACTTGCCTCG
TGTTTCTTTCTGCGAAGTGCCGTCGTCGGTAACGCGTTGCGCTGCTCATGCAGTAACCATCCACGCGGGTTTCGTACGCT
ATAGGCTGCTTTGGTCTTGACGTCTTGTGAATACAAATCATCAATATGACGTTGACAGAATAC---TATGAGAATATATA
ACGGAGTGCCCGCTCTCATTTTGTGAATTATTCAGGGCTCATTGGGTTTACATGGTATTTAAATCAAAGGAATAAGGAAA
GTAAGGAAATGCAATGCCCTATCCTCTATGCTCTTCAAACTTTAGGAATTTTTAATGAGGTCTCATCTAATATTAGGAAT
TCACAGGAATAATGTCAATATGGACACGAGGAATCTAGTACCTTAATATATGGGGAAAATCGTAAGGATCAAAAGTGAAT
ACCAGTTTCCTAGCTACATCCATTGGTATCCATTTCTCCGATAAGTACTTCCGACGGAGGGAGTATAAGATGTCTGCAGC
TTCGTCGACACTCGACAACTTATGCAATGTTTCCTACAATTTGATGCTCCTTGTGCACCCTCCTAAAATGTGATTTGAAT
GATCATAAATATTATATAAGTTTGGTACTATCAACATGAAATTAGTTAGCATCCACTATACTACAGTCCAAATACAACCT
ATACTTAGAGAAATAAAAAGGACATATTAATTTTATCAAAAAGGAAATAAAAAAATAAAGGGGAAAGGTAAAAGGATACC
ATGGTTTAGGGAACTCTATGTTTATTGACCTAAGTTTAGGTCAACTTTTTAGTTATCTTTTCACGGAATATCCAAATCTA
AGCCCGGGCTCATCTGCACCTGGTCAAGAAATAATTCATAAAATTTTTGAAAAAAGTCCAATTTTTTTGTGCATGGTAGA
CCATTTGGTGCATGAGGTGCGCTCCAAATTTCAGAGCATTTGGTCATTTTAGTAGCTCTCAGCAAAAAAGACAAATTGGG
TCAGAACAGTATATGAACTGTACACTATTTAACAGACCCCAATTTTTTTTTTGTCGAGAGCTACTCAGATGTCCAAATGT
TTTGAAATTTGGCGGACATCACGCACCAAATTATCTACCGTGCCAAAAAAAATTGGATTTTTTTTTATTTTCCTAGTATT
TGTTTTAATTTTTTTTATTCAGCGCAGGTGCAGATGCTCCTGGGAGCCAAAACGCCTCACTCTTGGCGCATAGATCTTGA
TTCACAATGATGAAATTGTGTGATCAGTTGCTATGTATTTTTG
>chr3A_18
-----------------------TGCAGCCCCACAGGGGATTTTGCTGGTTCAGAAAGGCATAACTTGTGGGCATAATCC
TCCATTTTTGTCCGCTGCCGACGTGTTAAGCGCATCCGGCGGAATGTGTGTCAATGCAAGTGCTCTCTGGATTCGGCCAT
TTGGGGACCAAACCGCCTCCTGGCATAGATAATTGAGCGTCGGATCAAATTATTGTTTAGATGATGAT-ACTTCAAACCC
CTCAGTGGCTAAGCTGCTAGTTCAGGTGCGGATGGGATACTCGGGCTTGTACGCTACTACACCTCAGCTTTGAGAGATAC
TTTTATTGACACAAATGAGGGATCAGCAGGGACACTTTGAGACATGTGATTAGTCCATTTTGGAATGCAGAAATTTTTTC
CCATCCAATTATTTAGC-------------TAACATGACAGTTCGTCAGAAAACAATATATCCGGCGCCC--AAAAGTAA
AACTCCTGATTGCATCCGATGAAAACGGCATT-TTTCGCCGACGCGTCGCCATATGCCAGCCGGGAAAGATGATTCGACG
GTGCTCCTTGGATATAGACCAGCCCAGGATTGATTTCGGCAGTGCAAATCAAAGCCATCCACGAAG-GAGCTAATTAGTC
AGAGGCTGGTCGACAGGCCGAGTGGCATGAAAACCTCCCCATCAGACCCACCGGG-------------------------
ACACCTAGATTACGAGCGTGTGAGCGCGCGACATCGCTAGAAGCTTTACGTCGCG-TCGCCCGAATTTTAATGGGAAAAG
AGGGGG-GCAAATATGCCAGTCGGACTGAGCTAC--AAGTGATTCCTCCCGGAGGAGGAGC-CCAAAAGCATCCCTATAG
TATATATACCTATCGTGTTTCTTGGAAGACTT-GAGCGATACAAGTTGCCTGGCCCAAGATCGCCAAAGAAAGATTTGCC
TTTCCCTCTCTCTGA--------CACCGCCGCTGGTGAATCGTCTTCAACCTCGGT---CTTCTTCCTCTTCCATGGCGC
AGCTTTTGTGGCTGGCGCTCGGGGTTCTTCTTCTGGCCAGCTCCGTGGCCGACGCGGCGACTGCCAACTACACCTTCACA
GTACTTCTCTCTACCTTCTGTCCGTCCATGCATAAGAGCTTTTATTCATTCAGTTCATCTCAAGTTCATAGATATAGAAG
TTTTCGCAATATAGGAGAACTAGAGAAACTTCGCCGTGTCCATACGTATATGCTCACATACGCCGGCTAGCGGCAACTTA
CATG------CTTGACTTACAGTGGCTATTAAGATTTCAGAGTCAACTTATATGTTCAGAAAACAGAGAATGGATAGCCG
ATAGACCTGAAAATGTAGATAAAGTTGATAGTTTATGTAGGATAGTTGATAGTTCTGTAGGAG-----------------
---AGTTCTATACCTGTTTTTCATGTATATGCCGCAAAATCTTCTG--------CTTCGCAATCGTGCATACAGTCCTAC
AAACCCTTGTCTGACGCCGTTGTTCCTCTGCAATGCTGCCACCAGGTACAGAGCATGAAAATCAACCAGCTGTGCAACAG
CACGGACATCATCGCGGTGAACGGCCAGCTGCCAGGCCCGACGATAGACGTGTTCGAGGGCGACGAGGTCGTCGTCGACG
TGATCAACGCGTCGCCGTACAACTTAACCATCCACTGGTAAAATCCTTACACCCCAGCTACAGAAAACTTTCAGTCTCTG
AAACTCTGTTCTTCGAAAAACATAGAGCCAACATAGAGCCGTTTGCAACCGTTCCAACGGCGGCGTGGGGCACACGCTGT
GTGTCATCTAGCCTCTTGTTTTT-GAATCAAGGTGGCATCTACCTAGTTCGCAGGACTGTTGAGGTGTCAGCCTGACAGG
CAGTTTAGTTTCTC---GGATTAGTTTGTCTGACTATCTTAGCGCCCGTGTGGCCGTGTGCCCATATCTCTAAGCCGAAA
GGGAAGGTTCTGAAAATGACGCCCTACCTTCCGAGGCACCGCCGTTCACTGTAGGCGACCTCATCTGAACACCCTCCAAG
TGTGCTCACCGCAGTGTTCAGACGGCCAAGTCTCGTTATCAGTACAAGTTTTTTTTGCAAATGTCGCCAATAGTACTACA
AGTTTACAACAAAATGTAGACAAAAGGATCACACAAAAAACAGCTAAACTTACCGGCCACTGTACTAGACAAACATTCA-
-------AACATATTTGTTTATGTCTTTCACGCTGTCTTTTTTCCTCTGGCAAGGACAAGT-------------------
-GTGGTCGGCACTTGAGTCTGCCGCCATGTGTTATCATTGGTGTGGTGCTGGGGATTTGAAT-------------TTAAC
TGATCTTTGGCGGCAGGCACGGCATTCTGCAGAAGCTGACGCCGTGGGCGGACGGGCCGAGCATGGTGACGCAGTGCCCG
ATCCAGCCCAACGGCACCTACACGTACCGGTTCAACGTGACGGGGCACGAGGGCACGCTGTGGTGGCACGCGCACTCCTC
CTTCCTCCGCGCCACCGTGTACGGGCCCCTCATCATCCGCCCCCGCAACGGCACCGCCTACCCCTTCCCGGCGCCGGACC
AAGAGGTCCCCGTCGTACTTGGTATAATCATAATCAATCACCACGCAGATCCCATTCCTGTCCATTGTCTGATAGTTCTA
TATTGATGGATGGATGGATGGGGAGGTTTTAATTTGGCATATCCTGGTTGTGGATGAGGGTCGGGACAGGCGAGTGGTGG
AGCCAGAATGTTGTCGACGTCGAGAAGGACGCCGTCATGGCCGGCCAGCTGCCCAGCCACTCCGACGCCTTCACCATCAA
CGGCCTCACAGGCCAGCTCTACCAGTGCGCAAGTATGTATTACCGTCAG----------TTCTGTAACTTCAGGTGAAAT
TTACAG-CTGATGGTGATGTGTGACATGATTCATTTGGTTCGTACGATAGATGAGACGTTCACGGCGGTGGTGCAGCCGA
ACACGACGGTGCTGCTCCGGGTGATCAACGCGGCGCTCAACACGCACCTCTTCTTCAAGGTGGCTGGCCACAACTTCACG
GTGGTGGCCGTGGACGCGTGCTACACCGCCAACTACACCACGGACACGCTGGTGCTGGCGCCGGGGAACACCGTGGACGC
GCTCGTCTACACGGCCGCCGCGCCGGGGAGCTACTACATGGCGGTGGAGCCGCACCACACGCTGTCGCCCGCGGCCACCA
CGGACGCCTCGGACAGCGGCTCCCTCGCCACGGGCATCCTGCTCTACAACGGCACGTCGGCCACGGCCACGCCCGCCATG
CCGGCCATGCCCAACAACTCGGACTCGACGGCGGCCAACGACTTCTACTCCGGGCTGCGGGGCGTTCCCGCGGCCGTGCC
GTCGCCGGTGGACGTGAACATGACCATCCAGCTGGGGCTGGGCCAGCTGCCGTGCGACGCGGCCCAGACCAACTGCTCCG
TGAACGCGTTCGCGGCGGCCATGAACGGCGTGTCGTTCCGGCTGCCGACGCAGATGTCGCTCCTGGAGGCGCAGTTCGGC
AACGCGTCCGGGGTGTACACGGCCGACTTCCCCGACGGCGTGCCGCCCAACGGCACGGCCATGGTGGAGGGCACCAAGGT
GAGGAGCCTGCCGTACAACTCGACGGTGGAGGTCGTGCTGCAGAACCCGATGGTGTTCCCGTCGGAGAGCCACCCGATCC
ACCTCCACGGCTTCAACTTCTTCGTGCTGGCGCAGGGGCTGGGCACCTTCGCCCCCGGCAACGCCAGCGCCTACAACCTG
GTCGACCCCGTGGCCCGCAACACCATCGCCGTGCCCGCCGGGGGCTGGGCCGTCATCCGCTTCGTCGCCAATAACCCAGG
TACTTTCTCCGTCCCT-------------------CTATTTCAGCCCAAACTATATGGGCCTTGATTCTAACAG----TG
TTAATGATTCGGTGTTTGGGCTT--------GCAGGCATGTGGTTCTTCCACTGCCACCTGGACGCGCACGTCCCGATGG
GGCTCGGGATGGTGTTCGCGGTGGAGAACGGGACGACGGCCGACTCCATGCTGCCGCCGCCGCCGGCGGATCTGCCCGTG
TGCTAGGGCACGCACGCAAGTTTCCGGCGCGATTTCACCATGATCTTGCGTGCAAATTTACAGAATTATTTGTTCTTTGT
GTGTGTGAAAAAACGCGAGGGGCGACGGATCGGATTGTATACGTGTGCAGGGCCGTTGGTTGATTTGCCGCGCG--TGTC
TACGGTGAACGTGTGCATGAATTGGGTTTGGTGTAACAACGTTCTCTTTCTTTGGTGTAAATACCAATGATTATTCAATT
TCAGAGGTTCTTTTCCTACTGGAGGTGTAGATACTATACACATGATGGTTGCATAC------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CGTGCTGGTCGGAGTGCATGCATGACGT
TCTCTTCCTTTGGTGTAAATATATGCCGACGATTGAACTTCAGAGGTTCGTATCCTTCTGACGGTGTATGTAGATACT--
TACAGGATTGCATATTGT-ACTGATTGGAGTGCATGACGTTGGCGATCTTTGAATTTCAATACGTTGATTGAACCAGAGA
GTATCTATTATCTACTCCCTCCGTTCTTAAATGTAAGTCTTTTTAGATATTTCAAGTGGACTACAACATACGAATGTATG
TAGACATATTTTAAAGTGTGGATTCACTCATTTTGCTTCGTCTGTAGGCACTTGTTGAAATCTGTAAAAAGGATTTATAT
TTAGAAACGAAGGGAGTAGCGAGCTGGATGAGATGCTACACATGCATCGGCAGATTGGCTGCTTGGCTTGCCTGGAG---
---GGCAACAACTTG-AATGAGAGTTCGTCACCAAAGGACAAAGTCGTGTTAGTGACGACTTTGCTGCCGACTTGCCTCG
TGTTTCTTTCAGC-AAATGCCGTCGTCGGTAACGCGTTGCGCTGTTCATGC-GTAACCATCCACGCGGGTTTCCTAGGCT
ATAGGCTGCATTGGCCTTGACGTCTTGTGAATACAAATCATCAATACGATGTTGACAGAATACAAGTATGAGAATATATA
AC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------
>SNPs
--------------SSS--------------S-----S-------S-S----S------S--------------------
------------------S-------------S-----S----------S-----------------------SS-----
------------------S--------------------------------------S-S-----------------S--
---------S---------------------------------S------------------------------------
---S------S----S------------------------------------------------------------S---
---------------------------------------------------------------S----------------
--------------------------------------------S------------------S----------------
-----------------------------------------------------S-S---------SS----------S--
---------------S------------S---------------------------------------------------
-------------------------------------------------------S------S-----S-----------
--------------------------------------------------------------------------------
--------------------------------S----S------------S--S--------------------------
-------------------------------------------------------S------------------------
-------------------------------------------------S-----------------S-----S------
--------------------------------------------------------------------------------
---------------S---------S------------------------------------------------------
------------------------------S----------------S--------------------------------
---------------------------------------------------------------SSSSSSSSSSSSSSSSS
SSS------------------------------S------SS---S--S----------S-------S------------
----------------S-------------S----------------S--------------S-----------------
------------S--------------------------------------------------S----------------
-------------------------------------------------S------------------------------
------------------------------------------S---------------------------S---------
-----------------------S-----------S--------------------------------------------
--------------SSS---------------------------------------------------------------
--------------------S-------------------------S--------S----------S-------------
-----S------------------------------S----SSS------------------------------------
S--------------------------------------------------------S--SSSSSS-S---S-S--SSSS
SSSSSSS-------------------------------------------------------S--------S-----S--
----------------------------S------S---------------------SS---SSSSSSSSSSSSS-----
-------------------------S--S---------------------------------------------------
--------------------------------------------------------------------------------
------------------------S--------------------S----------------------------------
----------------------------------------S------S-------------------SSS------SSSS
-------------------------------------------------------------S------------------
---------------------------------------------------------------------------S-S--
---------------------------------------SSS-S-------S-S--------------------------
---------------------------S---S---------S--------------------------------------
--------------------------------------------------------------------------------
-----------------S--------S-----------------------------------------------------
---------S----------------------------------------------------------------------
-------------------------------------------------------------------S------------
--SS-S-----S-------------------------------------S-------------S----------------
--------------------------------------------------------------------------------
-------S-----S--------------S--S--------S---------------------------------------
--------------------S-----------------------S-----------------------------------
---------------------S---------S----------------S-----S-------------------------
-------------------------S------------------------------------S-----------------
-----------------------------------------S--------------------------------------
---SS-SS----S-S-SSSSSSSSSSSSSSSSSSS--------------------------------S------------
-----S-----S-----------SSSSSSSS-----------------------------------------S-------
-------------------------------------------------------S-----------S---------S--
--------------S-SSSSSS--------------S--------S---------S--------S---------------
-------------------S--------------SS--------------------------------------------
-----------------------------------------------------------------------S--------
------------------------SSS-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S--------S---------------
------------------S--------------S--------------------S-----------S-----------SS
----S----------S-----------------------S--------------------------------S-S-SSS-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------SSS
SSS---------------------S------------------------------------------------------S
-------------S-----------------------------------------S------------------------
--------------------------------------------------------------------S--------S--
--S-----S---S-----------------------S------S------S-S--------------S------S-----
----------SSSS-S-SSSS-SSSS-SSSSS--SSS--S-SSS-----S--S---S--SS-----SS--S---SSS--S
SSSS-SSS-SS---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S----------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S--------------------------------------
>forward_616
--------------------------------------------------------------------------------
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------------------------------------CGGCACTGCAAATCAAACCT------------------------
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>reverse_1831
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------TACCCGCTGT
CATCTAGCCT----------------------------------------------------------------------
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-------------------------------------------
>forward_1568
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----------------------------TGTAATGCTGCCACCAGGTG--------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------
>reverse_3138
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-----------------CTGCTACACGGCCAACTACA-------------------------------------------
--------------------------------------------------------------------------------
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>forward_2056
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------------------------------------CACCGCCGTTAACTGTAGGT------------------------
--------------------------------------------------------------------------------
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>reverse_3372
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-----------GAACAACTCGGACTCGACGA-------------------------------------------------
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>forward_2312
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----------------------------------------------------AAGACAACTGAGGTCGGCAC--------
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>reverse_4197
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------------------------------------GTCATGATCCTGCGTGCAAG------------------------
--------------------------------------------------------------------------------
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-------------------------------------------
