>input_sequence_17027
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---------------GCCTCCTCTTCTCTCGATT-CCCTCCTTTAGCCATCTTTACAGGCACAAAATCATCCCAGCCTTT
TCCTGCCACTCTTCTCCTTCTCCACATTCCGTGAGCGCGTTTTCCCCACTTGAAATTCCGGCTCTCGAGACACAAGATCC
GCGAGGGGTGGTGGATTCTTTACTTGCTCGTTCCAAAA-ATCCCACTCTGCCCCGCTGCTCCACTTACCTTGTAAGGAGT
AGCGGAGACACTTTACCCGATTCGTTTCTTCAGGCGGCATGGAACGGCGTGTGCTTCCATCGTGCCCAAGATTTCAGCAG
CTTTAGGTGGTGGCATATAGA--AGTTGGAATCTTTGCCTTCCTTTTATCGTCTCCCGTTCTGCTCTGCTCTTACTGTCT
TTTAC--------TACC-CTCTTGCAGAGCTGCCTGGACTCCATTGGGGGCGGAATGGAGGTCTGGAGCATCAGAGCGGC
GCAGCTCTTGCTCTTCTTCTTCCTCTTGTCTGAGAGGCATGGGTCTTGTGCCGCCCTCGGTGAAGAAGGTGAGATGGATT
TCCCATGGGTTTGTGATTAGGAAGTGGCCATGGTTGTGTTGGTTCAAGTGGAACAGTCGTTGAC----CATCTGTGTGTC
TATCTTGGTGCTTCAGGGCGAGCCATGGGTTTCAGAGAAGAGCACCCAAGTGGATGGTTATGGAATTTGGAAGAAAAGAA
GGTTTTCAGCGCAGCGGCGACGCCGTAAGTCAGCCTGATCTGTTCTTGTTC------TTGTAGGATCAAATTCATGGTGA
AATGATTGCTACC----TTTTCTTTTCC-TGTGAAGATGTCAAATCATTTGCAAGTA----GTTATCTTGTACTCCCTCC
GTTCGAATTTAGATGACTTGCATTTGTCCACATTGGGATGCATCTATACTTGTATAGTGTCTAGGTACATCCGTTTCTAG
ACAAATGAAAGACATCTAATTTGGAACGGGGGGAGTATGTATCGCTTAGTCATGATTAA-----AGTTACTCAACGAACA
AGTCCTATTTTGATTTCAAGGGGTACATGATATTGCCCGCCGTTGTCTTTTTCTATTTGTAGCGTCATGGATTTACAAGT
CAAAGGGGT-CTAGAAGAAGCCATGACCATTAAGTA----GAGAATATGCAGGACAGCTAGATGTCTTTCTAGAGGAAGC
---TATGATTTTGTCTCTGGAATATTTAGGATACGTGTGTGAAACAAGGCTTTCACTCTTAAGCATTTCTTGATGCGTCC
CTCTTTTTTTTGACAATATCCAAAAAATTTACCTTCATGGATCAAGTCCTTCAGGTCTAGGGAAAACAATATTTCTAGGA
GTAAATTGCATCTGGAGCATTACAGAATTAAATTTCTGCAGTGCTTGATACATAATCTCTAC---TTTTTTACATTATGG
GCTTGATATACATAATCTAAAGCCATGTGATGATCTTTGCAGCTTAGTCAAGGGAAAAAAACTGTCAATTGAAATTCCTA
ACGAGTTGCAAGAGCGTATCATGATTTCAGAGGTTCTAACTGATGGAAGGCAAGAATCGTGCAGAAAATGTTTAACAAAG
TCAGTCTTCTTCTTTATATACCAGCTTCCCTTTCGTAAGAATTTCTGAGTAAGATGGGCCTAACTTCTAAAGTAAAACTG
ACATGACACAGGCAGTTGAAAACCAAAATACTCTGTTTCAGTTTAACCGGCAATCTTGACTTTGACTAGTTAAACTTTGC
AATCTTTTCCCCACAAAATAAAATAAA-----TAGAACCCACACTTTTTGAATCTTTCGGTAAACATCCGTTCTTTATCG
AAAAATTTATTGTGGCCCCTTG----------------------------------------------------------
----------------------------------------------------------------AAAATACATGCTCATT
TTCACTAAAAATAGGTTAAAGGCAAATGCCAAACATAAGTACACATGACAGCTGTTGTACAAGGGATGTGTAGCCTGTCT
CTTACATTAGTAAAGCTTAAGCATTGATATGTTAAAGCTTGAA-------------------------------------
------------------------------------GCGTGGAGAATACTGATATGCTAACTGTGGACTATACAAGTTTA
ACAATCAGACTCTTCAATTTATATTGGTGTTTTATATGCAGAACCATAGAGAGTAACACCCTGAGGCAACTCCTACAGGC
AAGGGAGCTTCAAGAATCAGCACCTTCCTCTAAGGCTCCTGATCAGTTTCATGAAAGCCAGGCTCCCATGTCTTTGCCAC
CATCGTATTCGCAAGCTGAAACCAACGAGTCTTCTTCTGTGCCTCACTGGGCTATCTACGCAGTGTGCATCAGTGGAGTG
CTTGGCCTTGTGGTTATAGCCTCTGTTGTGTATCTACTTGTCTCCCGTAGAAAGAAGGATAACACCGTCAATCCATGGGC
TACCGGGCTGAGTGGACAGCTAAGGAAAGCCTTTGTGACAGGTCAGTCTCCTATTACCTGAAGCTAAAATGCCATATTAC
ATCATCTGAAATGTGTGCCACAGATTGAACTTGGAGATGTTGAGTGTGCTTTACCTTGTGGGCAGGTGTTCCTTCTTTAG
GAAGGGCCGAACTTGAGGCGGCGTGTGAGAATTTCAGCAATGTGATTGGTACTGTATCTGACAGTGCATTGTACAAGGGA
ACCCTGTCAAGTGGAGTTGAAATAGCTGTTGCCTCCAGTCCAGTTAAGTCTGCCAAAGAATGGTCGGATCGGTCCGAGGA
GCAATTTAGGAACAAGGTAAGAAGTAATAGGCGAAACTACAACAGTGCTCAGATTTTCTCAACTAGCGTAGTACTGCTCT
ATCCCCGT-----------------------TGTCTGTGCCTGACCAACTCTTCCTCTTTCAGATCTCTGAGTTATCCAA
GGTGAACCACAAGAACTTCATGAACCTACTTGGTTACTGCACATGCGACGCTCCGTTCACCAGGATGATGGTGTTTGAGT
ACGCTCCATGCGGTTCCCTCTTCGAGCATCTGCACGGTGAG--------CTGCACATCAGTATCTGAATATCTTCCATAT
GC--------TGTTCTTGCTTCTGCTACTTCTCTCTCAGAAACAGTGAGGCTCATCCGATCCATGTTTTTCGATGCAGTG
AGGGAAGCAGAGCACCTGGACTGGCCTACCCGGCTGCGCATCATCATGGGAGTGACATACTGCCTGGAGCACATGAACCA
GCTAGACCCTCCTGTCACCCCAAGAACCCTAAACTCCTCATCCATCTACCTCACCGAGGACTACGCGGCCAAGTTCTCCG
ACACCGAGTTCTGGAAGGACGACGACGCGGACGCGTCGGCGCCGACGCGATCCGCAGGCCAGGACAGCATCGTCTACAAG
TTCGGGATACTGCTGCTCGAGGTGATCTCCGGCCGGCTGCCCTTCTCCGAGGACCACGGCCTGCTCGTCCTCTGGGCCTC
CAGCTACCTGGACGGCAAGCGGCCGATCGGCTCGATGGCCGACCCGGTGCTCAGGGCGTCGTCGCCTGTGCCCGAAGAGG
ACCTGGCGGCGCTGTGTGATGTCGTGAGGCTGTGCATCAACCGCGAGGCGGCGAAGAGGCCGTCCATGGGCGAAGTCGCG
GGGCTGATGAAAGGCGCCGTCAGACTGTCGCCGGAGCAGACGACCCCGAGGAATAACCCGCTGTGGTGGGCTGAGCTCGA
GATCATGTCCACGGCATCCACCTGAAATGACATACAGTATAAAGGGAAGGATAATTATACTGTACGTACTTACTAGATTT
TGCGTTTTAGTTTCTTCTTCGTTAC--TTTT-TTGTATGATATGGTACAC-TCCTTTTGGCCCCAATTTGTTTTTGTCCT
T-GGATCACTGTGATCCTGCATATTTCTTAAAGTTGAAAGGAATAGTAATTATTATTGTTGAC-----------------
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>chr5A_1_TraesCS5A01G152700
GCTTCATCCAGCAATGTATGTGTGTGCATGGCCTGCCCACGGTCCTCCAGTACTTCACGACAGAGCGTCCAACCTATGCA
ATGTGTAGAGAAACATTGAGTGAATGAATGAATTAACCAACATGTAGAGCAAGAAGAAGCAAACTTACGATCTCCATGGT
TGACACACCCAATGGCAACATCGTCTCCACACGTTCAACTGCGTCGCAGAACTTCATGACGGAGTTGCAAATGGTGTACC
ATCGGTGTGATATTGACCTCACATTCTGTTCATGGATGATGTGTATGTCTTAGAGTGCTTTTGCGCATGAAACAAATCAT
GCACGCGTTGCCAAA-AGATCGCGCATGAAACAATCA-------------------------------------------
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--------TGAACCGCGATGTAGTCCAAGTAGGGCAAGCGCGTTAGTGGCGGCTGCGGATGTCCTACGGTGCCTTGACGG
CGGCCGGAGAGATACAATGACGGCGTCGAAAGAGAAGAATGCGGATGCAAAGCAAGGGTAGAGTGAAAGAAAAGTGGACC
GGAATGGGTATTTGAGTCAGCCGGGGATGTCAATATACTATATGGCGGCGACGATCCGTACTCCCGTAAAGTTTATCACT
GTTCGCGGATTGATCTCCACCGCTCCAGGGACGAATAGGCTGTCTGATTTGGGATCAACTTTGGAAATGCCCGAGATGAC
GAGTACAACCATGTCATGTTCCCGTGGACAACGACTTGATTCCGGTGAAATTCCCGCAAAATCACTGCGCAATTTCAGGC
ATAACAAGAAGAGTTAATAAGGGAAAGAAAAGGGAGGGAAATTTCCAGCTGCCATGTGTGCACGGTACCTGGCTGGCCTG
AAACAGACAGGCAGGCAGGCAGACATCCACGCCTGCCTCCGATCCACCCAAAAGTACACTCCAGTTCCAATATTCCGCGT
CCTGGACTGACTTGCGCTCCGAGCTC---TTCTTTCTCCTCTGCCTTCTCGGCCTCTCCCAGCTCATCCCGTTCCCAGCA
CACTGCCCGCGCCCTGCCTCCTCTTCTCTCGATT-CCCTCCTTTAGCCATCTTTACAGGCACAAAATCATCCCAGCCTTT
TCCTGCCACTCTTCTCCTTCTCCACATTCCGTGAGCGCGTTTTCCCCACTTGAAATTCCGGCTCTCGAGACACAAGATCC
GCGAGGGGTGGTGGATTCTTTACTTGCTCGTTCCAAAA-ATCCCACTCTGCCCCGCTGCTCCACTTACCTTGTAAGGAGT
AGCGGAGACACTTTACCCGATTCGTTTCTTCAGGCGGCATGGAACGGCGTGTGCTTCCATCGTGCCCAAGATTTCAGCAG
CTTTAGGTGGTGGCATATAGA--AGTTGGAATCTTTGCCTTCCTTTTATCGTCTCCCGTTCTGCTCTGCTCTTACTGTCT
TTTAC--------TACC-CTCTTGCAGAGCTGCCTGGACTCCATTGGGGGCGGAATGGAGGTCTGGAGCATCAGAGCGGC
GCAGCTCTTGCTCTTCTTCTTCCTCTTGTCTGAGAGGCATGGGTCTTGTGCCGCCCTCGGTGAAGAAGGTGAGATGGATT
TCCCATGGGTTTGTGATTAGGAAGTGGCCATGGTTGTGTTGGTTCAAGTGGAACAGTCGTTGAC----CATCTGTGTGTC
TATCTTGGTGCTTCAGGGCGAGCCATGGGTTTCAGAGAAGAGCACCCAAGTGGATGGTTATGGAATTTGGAAGAAAAGAA
GGTTTTCAGCGCAGCGGCGACGCCGTAAGTCAGCCTGATCTGTTCTTGTTC------TTGTAGGATCAAATTCATGGTGA
AATGATTGCTACC----TTTTCTTTTCC-TGTGAAGATGTCAAATCATTTGCAAGTA----GTTATCTTGTACTCCCTCC
GTTCGAATTTAGATGACTTGCATTTGTCCACATTGGGATGCATCTATACTTGTATAGTGTCTAGGTACATCCGTTTCTAG
ACAAATGAAAGACATCTAATTTGGAACGGGGGGAGTATGTATCGCTTAGTCATGATTAA-----AGTTACTCAACGAACA
AGTCCTATTTTGATTTCAAGGGGTACATGATATTGCCCGCCGTTGTCTTTTTCTATTTGTAGCGTCATGGATTTACAAGT
CAAAGGGGT-CTAGAAGAAGCCATGACCATTAAGTA----GAGAATATGCAGGACAGCTAGATGTCTTTCTAGAGGAAGC
---TATGATTTTGTCTCTGGAATATTTAGGATACGTGTGTGAAACAAGGCTTTCACTCTTAAGCATTTCTTGATGCGTCC
CTCTTTTTTTTGACAATATCCAAAAAATTTACCTTCATGGATCAAGTCCTTCAGGTCTAGGGAAAACAATATTTCTAGGA
GTAAATTGCATCTGGAGCATTACAGAATTAAATTTCTGCAGTGCTTGATACATAATCTCTAC---TTTTTTACATTATGG
GCTTGATATACATAATCTAAAGCCATGTGATGATCTTTGCAGCTTAGTCAAGGGAAAAAAACTGTCAATTGAAATTCCTA
ACGAGTTGCAAGAGCGTATCATGATTTCAGAGGTTCTAACTGATGGAAGGCAAGAATCGTGCAGAAAATGTTTAACAAAG
TCAGTCTTCTTCTTTATATACCAGCTTCCCTTTCGTAAGAATTTCTGAGTAAGATGGGCCTAACTTCTAAAGTAAAACTG
ACATGACACAGGCAGTTGAAAACCAAAATACTCTGTTTCAGTTTAACCGGCAATCTTGACTTTGACTAGTTAAACTTTGC
AATCTTTTCCCCACAAAATAAAATAAA-----TAGAACCCACACTTTTTGAATCTTTCGGTAAACATCCGTTCTTTATCG
AAAAATTTATTGTGGCCCCTTG----------------------------------------------------------
----------------------------------------------------------------AAAATACATGCTCATT
TTCACTAAAAATAGGTTAAAGGCAAATGCCAAACATAAGTACACATGACAGCTGTTGTACAAGGGATGTGTAGCCTGTCT
CTTACATTAGTAAAGCTTAAGCATTGATATGTTAAAGCTTGAA-------------------------------------
------------------------------------GCGTGGAGAATACTGATATGCTAACTGTGGACTATACAAGTTTA
ACAATCAGACTCTTCAATTTATATTGGTGTTTTATATGCAGAACCATAGAGAGTAACACCCTGAGGCAACTCCTACAGGC
AAGGGAGCTTCAAGAATCAGCACCTTCCTCTAAGGCTCCTGATCAGTTTCATGAAAGCCAGGCTCCCATGTCTTTGCCAC
CATCGTATTCGCAAGCTGAAACCAACGAGTCTTCTTCTGTGCCTCACTGGGCTATCTACGCAGTGTGCATCAGTGGAGTG
CTTGGCCTTGTGGTTATAGCCTCTGTTGTGTATCTACTTGTCTCCCGTAGAAAGAAGGATAACACCGTCAATCCATGGGC
TACCGGGCTGAGTGGACAGCTAAGGAAAGCCTTTGTGACAGGTCAGTCTCCTATTACCTGAAGCTAAAATGCCATATTAC
ATCATCTGAAATGTGTGCCACAGATTGAACTTGGAGATGTTGAGTGTGCTTTACCTTGTGGGCAGGTGTTCCTTCTTTAG
GAAGGGCCGAACTTGAGGCGGCGTGTGAGAATTTCAGCAATGTGATTGGTACTGTATCTGACAGTGCATTGTACAAGGGA
ACCCTGTCAAGTGGAGTTGAAATAGCTGTTGCCTCCAGTCCAGTTAAGTCTGCCAAAGAATGGTCGGATCGGTCCGAGGA
GCAATTTAGGAACAAGGTAAGAAGTAATAGGCGAAACTACAACAGTGCTCAGATTTTCTCAACTAGCGTAGTACTGCTCT
ATCCCCGT-----------------------TGTCTGTGCCTGACCAACTCTTCCTCTTTCAGATCTCTGAGTTATCCAA
GGTGAACCACAAGAACTTCATGAACCTACTTGGTTACTGCACATGCGACGCTCCGTTCACCAGGATGATGGTGTTTGAGT
ACGCTCCATGCGGTTCCCTCTTCGAGCATCTGCACGGTGAG--------CTGCACATCAGTATCTGAATATCTTCCATAT
GC--------TGTTCTTGCTTCTGCTACTTCTCTCTCAGAAACAGTGAGGCTCATCCGATCCATGTTTTTCGATGCAGTG
AGGGAAGCAGAGCACCTGGACTGGCCTACCCGGCTGCGCATCATCATGGGAGTGACATACTGCCTGGAGCACATGAACCA
GCTAGACCCTCCTGTCACCCCAAGAACCCTAAACTCCTCATCCATCTACCTCACCGAGGACTACGCGGCCAAGTTCTCCG
ACACCGAGTTCTGGAAGGACGACGACGCGGACGCGTCGGCGCCGACGCGATCCGCAGGCCAGGACAGCATCGTCTACAAG
TTCGGGATACTGCTGCTCGAGGTGATCTCCGGCCGGCTGCCCTTCTCCGAGGACCACGGCCTGCTCGTCCTCTGGGCCTC
CAGCTACCTGGACGGCAAGCGGCCGATCGGCTCGATGGCCGACCCGGTGCTCAGGGCGTCGTCGCCTGTGCCCGAAGAGG
ACCTGGCGGCGCTGTGTGATGTCGTGAGGCTGTGCATCAACCGCGAGGCGGCGAAGAGGCCGTCCATGGGCGAAGTCGCG
GGGCTGATGAAAGGCGCCGTCAGACTGTCGCCGGAGCAGACGACCCCGAGGAATAACCCGCTGTGGTGGGCTGAGCTCGA
GATCATGTCCACGGCATCCACCTGAAATGACATACAGTATAAAGGGAAGGATAATTATACTGTACGTACTTACTAGATTT
TGCGTTTTAGTTTCTTCTTCGTTAC--TTTT-TTGTATGATATGGTACAC-TCCTTTTGGCCCCAATTTGTTTTTGTCCT
T-GGATCACTGTGATCCTGCATATTTCTTAAAGTTGAAAGGAATAGTAATTATTATTGTTGACATATACGGA--------
--------------------------------------------------------------------------------
------------------------------------------------GTATTTGTTAAAATTGTGTTGAATATGTGTAC
CAGGCTACAATTATACTTATGTGATTTGGTAGATGGGAAGGTGAGCCCGTAACCATGCCTTGGGATTAGCCATGAAGATG
AACTTCGTTAACAAAACATCACGTGTCCTGTCTACTTTTCTGCAATGAAAATTCAGGCTTTTC---TAACCGTATTTGCA
TTTCTATTATTTCTCATGTATCCCTAGGAAACCATCTAATTAATACATGTAGCATACTATTCGCAATAAATAAATAAATA
AATAATCTAATTAATACATGTAGCATACTATTCGCAATAAATAAATAAATAAATAAATAAATACATGTAGAATACATAGA
CAGTGCTCCATATTCCACCATCGTAAAAGTTGATAGCAAAAG--TTTTATTAGCCC-GCTCTCTGCATCATGAGATGCAT
ATGGCTTAAGTTATTACATCGCTGAGTACAAAGTTTGCAAACAATGGTCTTGCCAAAAATGAGGGAAAGAACAAAACTAT
CAAACTACTCGAACGAACATGCTAAACAAAACCACTCTAAATATTGAGAAGCCTATCACTAGCACACCACTCAAACTTAA
TCCTATGAAAAAAAAATCCTTGGATTGCAATCCTACAAATCAAATAATGAATGTAGAGAAAACTCGTAAGGATTATAATT
-------CTTCAAAAATCACACATAGGATAGACAGCAAGAGCCCTGCGATAGAAATATTTACAAGAACCTAACTAGTACT
CCCTCCATTCACGAATATAAGGTGTTCTAAGTTTTTTATGAATTGGACGTATATAGACACGTTTTAGTGTGTTTGTTCAC
TTGTTTGAGTATGTATGTAGTCCATATTGAAATATTCAAAACATTTTATATTTGTGCACGGAGGGAGTAACAAATTTTTC
TCTT-AATTTCTTACAACCAACATAAACTGTACATGGCATGTA--CATGCAAAAATGAAACACCATACAAATGATGTACT
GCAAACATTCTGTAG
>chr5B_1
GCTTCATCCAACAATGTATGTGCGTGAATGGCCCGCCCACGGTCCTCTAGTCCTTCATGTTAGAGCGTGCAACCTATACA
ATGTGTAGAGCAATATTGAGTGAATAATTAAATTAGTCAACATGTAGATCAACAAGAAGCAAACTTACGATCTCCATGGT
TGACACACCCAATAGCAAGATTGTCTCCACACGTTCAACTGCGCCGCAGAACTTCATGACGGAGTTGCAAATGGTGTACC
ATCGGTGAGATATTGACCTCACATTCTGTTCATGGATGATGTGTATGTCGTAGAGTGCTTTCGCGCATGAAACAAATCAT
GAATGCGCCGTCAAA-AGATCGAGCTCCTTGAGTTCATGCCTACAAAGTCTGCGGCTACGGCCAATCATGCATCACACAA
ACTCATCCTCCTTCACCTAGTACCCAGCCATCGTGCTTACTCTAGAAAACAACAAGAAGTTCAACAAAAAGCTCAATGAC
ATTTGACCGAACAGCTGGCGGACGTGGTGTCCGCCATGGACGTCGTCGACAGGGGACGAAGGGTACCTGGCTACGGAGGG
ATCCTAGGTGAACGGCGGCGTAGTCCAAGGAGGGCAAGCGCGTTGGTGGCGGCCGCGGACGTCCTACGATGCCTTGGTGA
CTT----------------GCGGCGTCGAAAGAGGAGGGTGCGGATGCAAAGCAAGAACGGAATGGAAGAAAAGCAAT-C
AAAAAGGGTATTTGAGTGAGCCCGGGGTTCTGGCAAAGCTGTCACTGTTTAC----------------------------
------------ATCTTCACTGCTCCGCAGATGGATAGGGTGTGATTCGGGGAG----CGTTGGAGATGCCCGAAATGAC
GAGTACAACCATGTCATGTTCCCGTGGACAATGATTCGATTCCCGTGAAAATCCCGCATAATCACTGCGCAATTTCAGGC
AAAACAAGAAGAGTTAAGAGAGGAAAGAAAAGTGAGGGAAATTTCCACCTGCCATGTGTGCATGGTACCTGGCTGGCCTG
AAAGAAACAGGCAGGCAGGCAGACATCCACGCCTGCCTCCGATCCACCCAAAAGTACACTCCAGTCCCAATATTCCGCGT
CCTGGACTGACTTGTGCTCCGAGCTCTTCTTCTTTCTCCTCTGCCTTCTCGGCCTCTCCCAGCTCATCCCGTTCCCAGCA
CACTGCCCGCGCCCTGCCTCCTCTTCTCTCGATTCCCCCCCTTTAGCCATCTTTACAGGCACAAAATCATCCTAGCCTTT
TCCTGCTACTCCTCTCCTTGTCCACATTCCGTGAGCGCGTTTTCCCCTCTTGAATCTCCGGCTCTCGAGACAC-AGATCC
GCGACGGGTGGTGGATTCTTTACTTGCTCGTTCC-AAA-GTCCCACTCTGCGCCGCTGCTCCACTTACCTTGT-AGGAGT
AGCGGAGACACTTTACCCGATTCGTTTCTTCAGGTGGCATGGAACGGCGTGTGCTCCCACGGTGCCAAGGATTTC---AG
CTTTAGGTAGCAT-ATATAGA--AGTTGTAATCTTTGCCCTCCTTTTTGTCATCTCC--T----TCTGCTCTTACTGTCT
TTTACAGTTTTACTACC-ATCTTGCAGAGCTACCTGGA---CATTGGGGGCGGAATGGAGGTCTGGAGCGTCAGAGCGGC
GCAGCTCTTGCTCTTCTTCTTCCTCTTGTCTGAGAGGCATGGGTCTTGTGCCGCCCTCGGTGAAAAAGGTGAGATGGATT
TCCCATGGGTTTGTGATTAGGAAGTGGTCATGATTGTGTTGGTTCAATTGGAACAGTGGTTGAC----CATC--TGTGTC
TATCTTGGTGCTCCAGGGCGAGTCATGAGTTTCAGAGAAGAGCACCCAAGTGGATGGTTATGGAATTTGGGACAAAAGAA
GGTTTTCAGCGCAGCGGCGACACGGTAAGTCAGCCTGATCTGTTCTTGTTC------TTGTAGGATCAAATTCATGGTGA
AATGATTGCTACCCAATTTTATTTTTTTTGGTGAAGATGTCAAATCATTTGCAAGTACGTAGTTATCTTGTAGTATGTCA
TGATTAAGTTATCATTATCATTTACTTG----------------------------------------------------
---------------------------------------------TTAGTCATGATTAATAATAAGTTACTCAACGAACG
AGTCCTATTTTGATTTCAAGGGGTACATGATATTGCCCGCCGTTGTCTTTTTTTATTTGTAGCGTCATGGATTTACAAGT
CAAAGGGGT-CTAGAAGAAGCCATGACTAT----TA----GAGAATATGCAGGACAGCTAGATGTCTTTCTAGAGGAAGC
---TATGATTTTGTCTCTGGAATATTTAGGATACGTGTGTGAAACAAGGTTTTGACTTTTAAGCATTTCTTGAAGCGTCC
CT----TTTTTTTCAATGTCCAAAAAATTTACCTTCATGGATCAATTCCTTCAGGTCTAGGGAAAACAGTATTTCTGTGA
GCAAATTGCATCTGGAGCATTACCGAGTTAAATTTCTGCGGTGCTTTATACATAATCTTTATTTATTTTTTTAATTATGG
GCTTG--ATACATAATCTAAAGCCATGTGATGATCTTTGCAGCTTAATCAAGGGAAACAAACTATCAATTGAAATTCCTA
ACGAGTTACAAGAGTGTATCATGATTTCAGAGGTTCTAACTGATGGAAGGCAACAATCGTGCAGAAAATGTTTAACAAAG
TCAGTCTTCTTCTTTATATACCAGCTTCCCTTTCGTAAGAATTTTCGAGTAAGACGGGCATAACTTCTAAAGTAAAATTG
ACATGACACAAGCAGTTGAAAACCAAA--ACTCTGTTTCAGTTTAACCAGCAATCTTGACTTTGACTAATTAAACCTTAC
AATCTTTTCCCCACAAAATAAAATAAAATAAATAGAATTCACACTCTTTGAATCTTTCGGTAAACTTTTACTATTAGATT
TACCACTACATAATGTTTTGATCATGTTCATTTCCATAACGTTTAAGAAATGTATATTACTACAAAACAAACAAGAAAGA
TTTAGCATTGCAGATCGTGTGATTGATAAATAAAAACA--TGTAGTACCTTATGTCGAAAAACTAAAATACATGCTCATT
TTCACTAAAAATAGGTTAAAGGCAAATGCCAAACATAAGTATACATGACAGCTGATGTACAAGGGATGTGTAACCTGTCT
CTTACATTAGTAAAACTTAAGCATTAATATGTTAAAGCTTGAAATGGCTGTATGCATCGTGCTGATGCAGAGGCCGGGGA
TCCCCCCTTTTCGAAAAAAAAATGTTAAAGCTTGAAGCGTGGAGAATACTGATATGCTAACTGTGGACTATACAAGTTTG
CCAATCATACTCTTCAATTTATATTGATGTTTTAT--GCAGAACCATACGGAGTACCACCCTGAGGCAACTCCTACAGGC
AAGGGGGCTGCAAGAATCAGCACCTTCCTCTAAGGCTAATGATCAGCCTCATAAAAGCCAGTCTCCCATGTCTTCGCTGG
CATCGCATTCGCAAGCTGAAACCAACGAGTCTTCTTCTGTGCTTCACTGGACTATCTACGCATTGTGCGTCAGTGGAGCG
CTTGGCCTTGTGGTTATAGCGACTGTTGTGTATCTACTTGTCTCCCGTAGAAAGAAGGATAACACCGTTAATCCATGGGC
TACCGGGCTGAGTGGACAGCTAAGGAAAGCCTTCGTGACAGGTCAGCCTCCTATTACCTGAAGCTAAAATGCCATATTAC
AACATCTGAAATGTGGGGCACAGATTGAACTTGGAGATGTTGAGTGTGCTTTACCTTGTGGGCAGGTGTTCCTTCTTTAG
GAAGGGCCGAACTTGAGGCGGCGTGTGAGAATTTCAGCAATGTGATCGGTACTGTATCTGACAGTGCATTGTACAAGGGA
ACCCTGTCAAGTGGAGTTGAAATAGCTGTTGCCTCCAGTCCAATTAAGTCTGCCAAAGAATGGTCGGATCGGTCCGAGGA
GCAATTTAGGAACAAGGTAACTG---ATTGGTGAAACTACAACCGTGCTCGATTTCAACTTGCAGTGTACTGAGTAGGAT
ATAACTAGTAGGC-----------------------GTGTCTGACCAAC---TCCTCTTTCAGATCTCTGTGTTATCCAA
AGTGAACCATAAGAACTTCATGAACCTACTTGGTTACTGCACATGCGACGATCCATTCACCAGGATGATGGTGTTTGAGT
ACGCTCCATGCGGTTCGCTCTTCGAGCATTTGCACGGTGAGTGTCCTAGCTGCACATCAGTATCTGAACACCTTCCATAT
GC--------TGTTCTCGCTTCTGCCACT--TCTCTCAGAAACAGTGACGCTCATCCGATCCATGTTTTTCAATGCAGTC
AGGGAAGCAGAGCACCTGGACTGGCCTACCCGGCTGCGCATCATCATGGGAGTAACATACTGCCTGGAGCACATGAACCA
GCTAGACCCTCCTGTCACCCCAAGAACCCTCAACTCCTCGTCCATCTACCTCACCGAGGACTATGCGGCCAAGTTCTCCG
ACACCGAGTTCTGGAAGGACGACGAAGCAGACG---TGGCGCCGACGCGATCCGCAGGCCAGGACAGCATCGTCTACAAG
TTCGGGATACTGCTGCTCGAGGTGATCTCCGGCCGGCTGCCCTTCTCCGAGGACCACGGCCTGCTTGTCCTCTGGGCCTC
CAGCTATCTGGACGGCAAGCGGCCGATCGGATCGATGGCCGACCCGGTGCTCAGGGCGTCGTCGCCTGTGCCCGAAGAGG
ACCTGGCGGCGCTGTGTGATGTAGTGAGGCTGTGCATAAACCGCGAGGCGGCGAAGAGGCCGTGCATGGGCGAGGTCGCG
GGGCTGATGAAAGGCGCCGTCAGACTGTCGCCGGAGCAGACGACCCCGAGGAACAACCCGCTGTGGTGGGCTGAGCTCGA
GATTATGTCCACAGCATCCACCTGAAATGACATG-----CAAAGGGAAGGGTAATTATACT-------------AGATTT
TGCATTTTAGTTCCTTTTTCCATTACTTTTT-TTGTATGATATGGTATAC-TCCTTTTGGCCCTGATTTGTTTTGTGTCC
TCGGATCACTGTGAGCCTGCATATTTCTAAAAGTTGAAAGAAAGTA----------------------------------
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>chr5D_2
-CTTCATCTAACAGTGTATGTGCGTGCATGGCCTGCCCACGATCCTCTAGTACTTCACGGCAAAGCGTGCAACCTATACA
ATGTGTAGAGAAGCATTGAGTGAATGAATG-----ACCAACATGTAGAGCAAGAAGAAGCAAACTTATGATCTCCATGGT
TGACACTCCCAATGGCAACATCGTCTCCACACTTTCAACTGCGCCGCAGAACTTAATGACGGAGTTGCAAATGGTGTACC
ATCGGTGCGATATTGACCTCACATTCTGTTCATGGATGATGTGTATGTCGTAGAGTACTTTTGTGCATGAAACAAATCAT
GCACGTGCCGCCAAAGAGATCGAGCTCCTTGAGTTCATGCCTACAAAGTCCGCAGCTACGACCAACCATGCATGACAC-A
ACTCATCCTCCTTCACCTAGTACCCCGCCATCGTGCTTACTCTAGAAAACAGCAAGAAATTCAACAAAAAGCTCAATGAC
ATTTGAGCGAACACCTGCCGGGTGTGGTGTCCGTCATGGATGTCGTCGACAGGGA-----------------------GG
ATCCTAGGTGGACGGCGGTGTAGTCCA-----------------AGTGGCGGCTGCGGACGTCCTACGGTACCTTGATGG
CGGCCGGAGAGGTACAGCGGCGGCGTCGAAAGAGGAGGATGCGGATGCAAAGTAAGGGTGGAGTGAAAGAAAAGTGGACC
AGAATGGGTATTTGAGTGAGTCGGGGATGTCAATGTACTATATGACGGCGACGATCCGTACTCCCGCAAAGTTCATCACT
GTTCGCAGACTGGTCTCCACCGATCCAGAGAC-AATAGGCTGTCTGATTTGGGATCAACGTTGGAAATACCCGAGATGAT
GAGTACAACTATGTCATCTTCCCGTGGACAGTGATTTGATTCCGGTGAAAACCCCGCAAAATCACTGCGCAATTTCAGGT
AAAACAAGAAGAGTTAATAAGGGAAAGAAAAGGGAGGGAAATTTCCACCTGCCATGTGTGCACGGTACCTGGCTGGCCTG
AAACAGACAGGCAGGCAGGCAGACATCCACGCCTGCCTCCGATCCACCCAAAAGTACACTCCAGTTCCAATATTCCGCGT
CCTGGACTGACTTGTGCTCCGAGCTC---TTCTTTCTCCTCTGCCTTCTCGGCCTCTCCCAGCTCATCCCGTTCCCAGCA
CACTGCCCGCGCCCTGCCTCCTCTTCTCTCGATT-CCCCCCTCTAACCTTCTTTG------------CATCCTAGCCTTT
TCCTGCTACTCCTCTCCTTCTCCACATTCTTTGAGCGCATTCCCCCCTTTTGAAATTCCGGCTCTCGAGACAC-AGATCC
GTGAGGGGTGGTGGATTCTTTACTTGCTCGTTCC-AAAAATCCCACTCTGCGCCGCTGCTCCACTCACCTTGT-ACTAGT
AGCGGAGACACTTTACCCGATTCGTTTCTTCAGGCGGCATGGAACGCCGTGTGCTTCTACCGTGCCCAAGATTTCAGCAG
CTTTAGGTGCTGCTATATGTAATAGTTGGAATCTTTGCCCTCCTTTTTATCGCCTCCCGT----TCTGCTCTTACTGTCT
TTTAC--------TACCAATCTTGCAGAGCTGCCTGGACTCCGTTGGGGGCGGAATGGAGGTCTGGAGCATCAGAGCGGC
GCAGCTCTTGCTCTTCTTCTTCCTCTTGTCTGAGAGGCATGAGTCTTGTGCCGCCCTCGGTGAAGAAGGTGAGTTGGATT
TCCCATGGGTT-GTGAGTAGGAAGCGGTCATGGTGGTTTTGGTTCAAGTGGAACAGTGGTTGACCATGCATC--TGTGTC
TATCTTGGTGCTCCAGGGCGAGCCATGAGTTTCAGAGAAGAGCGCCCAAGTGGATGGTTATGGAATTTGGGACAAAAGAA
GGTTTTCAGCGCAGCGGCGACGCGGTAAGTCAGCCTGATCTGTTCTTGTTCTTGTCCTTGTAGGATCAAATTCATGGTGA
AATGATTGCTACC----TTTTTTTTCTTTTGTGAAGATGTCAAATCATTTGCAAGTA----GTTATCTTGTATGTATCA-
--------------------------------------------------------------------------------
---------------------------------------------TTAGTCATGAT------TAAGTCACTCATGGAACA
AGTCCTATTTTGATTTCAAGGGGTACATGATATTGCACGCCGTTGTCTTTGTTTATTTGTGGCATCATGGATTTACAAGT
CAAAGGGGGACTAGAAGAAGCCATGACTAT----TAAGTAGAGAATATGCAGGACAGCTAGATGTCTTTCTAGAGGAAGC
TAGTATGATTTTGTCTCTGGAATATTTAGGATACGTGTGTGGAACAAGGTTTTGACTTTTAAGCATTTCTTGATGCGTCC
CT---TTTTTTTACAATATCCAAAAATATTACCTTCATGGATCCAGTCCTTCAGGTCTAGGGAGAACAGTATTTCTGTGA
GTAAATTGCATCTGGAGCATTACAGAATTAAATTTCTGCAGTGCTTGATACATGATCTTTATTTTTTTTT-ACATTATGG
GCTTG--ACACATAATCTAAAGCCATGTGATGATCTTTGCAGCTTAGTCAAGGGAAACAAACTGTCAATTGAAATTCCTA
ACGAGTTGCAAGAGCGTATCATGATTTCAGAGGTTCTAACTGATGGAAGGCAACAACTGTGCAGAAAATGTTTAACAAAG
TCAGTCTTCTTCTTTATATACCAGCTTCCCTTTCGTAAGAATTTTTGAGTAAGATGGGCATAACTTCTAAAGTAAAACTG
ACATGACACAAGCAGTTGAAAACCAAAATACTCTGTTTCAGTTTAACCGGCAATCTTGACTTTGACTAGTTAAACCTTAC
AATCTTTTCCCCACAAAATAAA-TAAAATAAATAGAACTCACACTCTTTGAATCTTTCGGTAAACTTTTACTGTTAGATT
TACCATTACATGATGTTTTGATCATGTTCACTTCCATAACGTTTAAGAAATG--TATTACTACAAAACAAACAAGAAAGA
TTTAGCATTGGAGATCATGTGATTAGTAAGTAAAAACAAATGTAGTACCTTCTGTCGAAAAACTAAAATACATGCTCATT
TTCACTAAAAATAGGTTAAAGGCAAATGGCAAACATAAGTATACATGGCAGCTGATGTACAAGGGATGTGTAACCTGTCT
CTTACATTAGTAAAACTTAAGCATTAATATGTTAAAGCTT----------------------------------------
---------------------------------GAAGCGTGGAGAATACTGATATGCTAACTGTGGACTATACAAGTTTG
CCAATCATACTCTTCAATTTATATTGATGTTTTAT--GCAGAACCATACGGAGTACCACCCTGAGGCAACTCCTACAGGC
AAGGGGGCTGCAAGAATCAGCACCTTCCTCTAAGGCTACTGATCAGCA---------------TCCCATGTCTTCGCCGC
CATCGCATTCGCAAGCTGAAACCAACGACTCTTCTTCTGTGCTTCACTGGGTTATCTACGCATTGTGCGTCAGTGGAGCG
CTTGGCCTTGTGATTATAGCCTCTGTTGTGTATCTACTTGTCTCCCGTAGAAAGAAGGATAACACCGTCAATCCATGGGC
TACCGGGCTGAGTGGACAGCTAAGGAAAGCCTTCGTGACAGGTCAGTCTCCTATTACCTGAAGCTAAAATGCCATGTTAC
ATCATCTGAAATGTGTGCCACAGATTGTACTTGGAGATGTTGAGTGTGCTTTACCTTGTGGGCAGGTGTTCCTTCTTTAG
GAAGGGCCGAACTTGAGGCGGCGTGTGAGAATTTCAGCAATGTGATCGGTACTGTATCTGACAGTGCATTGTACAAGGGA
ACCCTGTCGAGTGGGGTTGAAATAGCTGTTGCCTCCAGTCCAGTTAAGTCTGCCAAAGAATGGTCGGATCGGTCTGAGGA
GCAATTTAGGAACAAGGTAACTG---ATTGGCGAAACTGCAACGGTGCTCAATTTCTTTCAACTTCTGTGGTACTGCATA
AGTAGAAGGCGAAACCGCAACAATGTTCTGCTGTCTGTGTCTGATCAACTCTTCCTCTTCCAGATCTCTGAGTTATCCAA
AGTGAACCATAAGAACTTCATGAACCTACTTGGTTACTGCACATGCGACGATCCGTTCACCAGGATGATGGTGTTTGAGT
ACGCTCCATGTGGTTCGCTCTTCGAGCATTTGCACGGTGAGTGTGAACAT----CATCAGTATCTGAACACCTTCCATAT
GCAGATATGATGTTGTCGCTTTTGCCACTTCTCTCTCAGAAACAGTGACGCTCATCCGATCCATATTTTTCGATGCAGTC
AGGGAAGCAGAGCACCTGGACTGGCCTACCCGGCTGCGCATCATCATGGGAGTGACATACTGCCTGGAGCACATGAACCA
GCTAGACCCTCCTGTCACCCCAAGAACCCTAAACTCCTCATCAATCTACCTCACCGAGGACTACGCTGCCAAGTTCTCGG
ACACCGAGTTCTGGAAGGACGACGAAGCCGACG---CGGCGCCGACGCGATCCGCAGGCCAGGACAGCATCGTCTACAAG
TTCGGGATACTGCTGCTCGAGGTGATCTCCGGCCGGCTGCCCTTCTCCGAGGACCACGGCCTGCTTGTCCTCTGGGCCTC
CAGCTATCTGGACGGCAAGCGGCCGATCGGCTCGATGGCCGACCCGGTGCTCAGGGCGTCGTCGCCTGTGCCCGAAGAGG
ACCTGGCGGCGCTGTGTGATGTCGTGAGGCTGTGCATAAACCGCGAGGCGGCCAAGAGGCCGTCCATGGCCGAGGTCGCG
GGGCTGATGAAAGGCGCCGTCAGACTGTCGCCGGAGCAGACGACCCCGAGGAATAACCCTCTGTGGTGGGCCGAGCTCGA
GATCATGTCCACTGCATCCACCTGAAATGACATG-----TAAAGGGAAGGATAATTATACT-------------AGATTT
TGCATTTTAGTTTCTTCTTCCATTACTTTTTTTTGTATGATATATGGTACATCCTTTTGGCCTCAGTTTGTTTTTGTCCT
T-GGATCACTGTGAGCCTGCATATTTCTAAAAGTTGAAAGGAATAGTAATTATCATTTGACGAAACTGCTCCATGGACGA
TACTGGCGCCCGCGTGTGCACGATATGTAAATCCAGCGTCCTGTGTTGTTTCACTCATACGCATGTACGGCCTGATTTAA
CCATCGTCTGTGAATCGTCCTGATTTTATCGTGTGCATAGCATGCCGTGTATCTGTTAAAATTGTGTTGAATATGTA---
-----------------------ATTTGGTAGATGGGGAGGTGAGCCCATAATCATTCCTCAGGATTAGCCACGATGGTG
AACCTCGTTAACGAAACATCGCAAGTCCTGTCTACTTTTCTGCAATGATAGATTTGCACTTTTTTTTAACCGTATTTGCA
TTTCTATTATCTCTCATGTATCCCTTGGAAACCATCTAATTAATACATGTAGCATAC-----------------------
---------------------------------------------------------------------------ATAGA
CAGTGCTCCATATTCCACCATTGTAAAAGTTGATAACAAAAGTTTTTTATTAGCCCTGCTCTCTGCATCATGAGATGCAT
ATGACTTAAGTTATTACATTGCTGAGTACAAAGTTTGCAAACAATGGTCTTGCCAGAAATG------AGAACAAAACTAT
CAAACTACTCGAACGAACATGATAAACAAAACCAATCCAAGTATTGAGAAGCCTATCACTAGCACACCACTCAAACTGAA
TCCTATGGAAAAAAAATCCTTGGATTGCAATCCTACAAATCAAATAGTGCATGTAGAGAAAACTCGTAAGAATTATAAAT
TATAATCCTTCAAGAATCACACATAGGATAGACAGCAAGAGCCCTGCTATAGAAATATTTACAAGAACCAAACTAGTATT
CCCTCCGTTCACAAATATAAGGTGTTCTAAGTTTTTTATGAATTGGACATATATAGACACATTTAACTGTGTTTGTTCAC
TCATTTGAGTCTGTATCTAGTCCATATTGAAATATCCAAAACATCTTATATTTGTGAACGGAGGGAGTAACAATTTTTTC
TTCTCAATTTCTTACAACCAACATAAATTGTACATGGCATGTAGTCATGCAAAAATGAAACACCATACAAATGATGTATT
GCAAACGTTCT----
>SNPs
----------S-----------S------------------------S-----------S--------S--------S--
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
-------S-----------------------------------------S------------------------------
-------SS-------------S--SSSSSSSSS----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S---S-----------S-----------------------------S-----------------S--
-----------S----SS-S--------------S--S---------------------S--------------------
S----------------S--------------------------S---------------------S------S------
------S--S------------------S------------------------------S--------------------
-------------------------------S--S---------------S-----------------------------
-S---------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------S---------------------------------S-------
------S----S-----------------------------------S-------------------------S------
----------------------------------S----------------S---------------------S------
-----------------------------------------------------------S--------------------
------------SS-------------------------S-------SSSSS-SS--SS-SSSS----------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S-----------------------------S--------------SS------
------------S--------------S------------------------------------------S-S-------
-----------------------S--------------------------------------------------------
---------------------S----SS--------------------------------------------S-SSS--S
SSSSS--S---SSSSSS-SSSS-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------
----------------------------------------------------S---------------------------
---------------------------S--SSSS----------------------------------------------
-------------------------------------------------S---S---S----------------------
--SSS------S--------------------------------------------------------S-------SS--
----------------------------------------------------------S--S------------------
-----SS--------------------------------------------------S----------------------
-----------------------------------------------------S--------------------------
--------------------------------------------S--------------S--------------------
----------S----------------------------------------------------------------S--S-
--------------------------------------S------S-------------------S-SSSS-S--SSSSS
S-SS---SSS--SS-SSSSSSS----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S------------S-----------------S-------
--------------S----------S------------------------------------------------------
-------------------------------------------------------------------------------S
S------S------------------S--------SS-----------SS-----S------------------------
-----S---S---------------------------S--------SS----S--------S------------S---S-
-----S------------------------------------S-------------------S-----S---------S-
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--------------------SSSSSS--S--------------S-------SS--S-S------SSS--S-------SS-
--SS-SSS-------------------------------S----------------------------------------
S--------S----------------------------------------S-----------------------------
----------------S------------S--------------------------------------S-S---------
----------------S--------S----------------------S------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S--S----SSS--------------------------------------------
-----------------------------------------------------------------S--------------
------S-------------------------------------------------------------------------
-------------------------------------S-----------------------------------S------
--------------------------------------------------------------------------------
------------S--------------------SSSSSS----------------------SSSSSSSSSSSSS------
---S----------------SS-SS----------------------S--------------------------------
--------------S-------------S------------------------S---SSSSSS-SS-S-SSS--------
--------------------------------------------------------------------------------
----------------------------------------------------S-----------------------SSSS
SSSSSSSSSSSSSSSSSSSSSSS--------------S----------S---S---S---SS----------S--S-S--
---S--------S-------S-SS------------------------S-SS-SS-SSS---S-----------------
----------S--------------S-------------------------------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
---------------------S-------------S--------------------------------------------
---S---------------S-----------------------------------S-----SSSSSS-------------
---------------------S------------S--S--S------------------------------------S--
-------S--------------------------------------S--S--------------------S-------S-
-------------S---------------------------------S---------------------S--------S-
------S-----S-----------------------------------S-----------S---S-S-------------
-SS-------S-----S------------------S--------S-----------S----------------S------
-SS------------------------S--------------------------------------------------S-
------S----SSSS
>forward_962
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CACTGCGCAATTTCAGGC
AT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------
>reverse_1868
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------GGTTTCAGAGAAGAGCACCCA--------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------
>forward_1292
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CAGCCTTT
TCCTGCCACTCT--------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------
>reverse_3496
--------------------------------------------------------------------------------
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-------------------------------------------------------ACACCCTGAGGCAACTCCTA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------
>forward_1354
--------------------------------------------------------------------------------
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------------------------------------------------------ATTCCGGCTCTCGAGACACA------
--------------------------------------------------------------------------------
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>reverse_3568
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-----------------------------------------------TTCATGAAAGCCAGGCTCCC-------------
--------------------------------------------------------------------------------
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>forward_3530
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----------------------------------------------------------------------TCCTACAGGC
AAGGGAGCTT----------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------
>reverse_5478
--------------------------------------------------------------------------------
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-------------------------------------AAGGTGAGCCCGTAACCATG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
