>input_sequence_25013
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---------------------------------------------------------------------------ATGGT
GTCGGCCACCAAACTAGAAGGTGGATATTGTTTTCACAGCAAGAACTCTCCTCTCGATCAACCTGAAGGTAAATAAAAGT
GCTTTGAACTTCCAAATGTTTCTCTCTTTTCGGAATGACTGTCTATAATATTCTTTAATCCTAGCATCATGAATTTCTTC
TTTTGCCTGTGTAAAACTGTAATTGTCCTCTACACTGTTCTGGCACGAAAAACAAATTAGTA-TTTTTTTCTTGTCTAAG
TATTTAGTCATCCTTTACTATTTTCTGGCACCAAAAACAAAACCAAAAAGGATGAGCT-GTGTATGTAAACTTATCCGTT
TGTTTTTCCACATATTTGAACTCTCTGCCGAGTTAGATAGCTACTCCCTCTGTTAGTGATCTAAACGCTCTTATATTTCT
TTACGGAGGGAGTATGTTATAGTTGAATTCAATGATATGCGCCTGCTTTGATGCTACAGTTGCAGTTTGGAATACTGAAG
TATCCCTAGATAATTTTACACAAGCACTTTCTT--------TTTACCAAACCTAGCTGTGTAATCACCT---TTAACCCT
TTAAAATAACAGCACATGGTCAGTTATATATTATTGTGGCATTGTAGTATTCATACATTTCTCTTTGAGCTTCAGGTGTG
AAGATACATCTTTACCGTCTTGGAATAGAACAGTGTGAACATGATACCCTCAAAAGCTTTGCATGTGCTGGTGAAGGCAG
CCCAAGTTTACTTGATACAATCATTCTTTCTCAGGTTTGTATTACCTGAGAGTTCATACAATCTTTATGAGTTATCATGG
CACCATTTTTAATAGATGATTTTCTTTGTAACAGTGGGAGAACTTTGCTCAGAAGGGCCAGTTGGGATATGATGTTACTA
CTTGCGAACTTAAGGTGCTTCTTGGATCC--------CCCCTAATTCTTGTGTCCTAGATGAAAGTAACTTTAAACATTT
GCTTGTGCATGTTGGATTCTGATACCCAAACGGCCAAACTAAAAAACACAAAACCAGAGATGTGAAA-TATAGTTTTATA
CATTTTATACGTAACCTCTTCCCTTCCTCAGTTTCCACAATCAAACTGCAGAGTGGCATGCTAATACCAAATATTCCTGC
AACACCACCTACCAAATTGTTCACATTCCCACTAATTGCCACTGTTGCTGCCCTCATTGGAACAGTCTGCCTTTCCTGTG
CTGCCAATCGTGATGGCTATGGGGGGATAGTACGGATGGGGATGTTAGGAAACATAGCAGTGGGAAATAAGAGAGAAAGG
AGCAGGAAAGATTCGATGAATAATAGTGGTTGCCACTTATAGTTATCCACATCTTAAAGCACATAACTATTTCATCTTAG
GTGGCAGAAGTTTAACTTTGAAGAAATATTGCGATTCTAGAAGTGTAATCAACCAACCAACATTTTTT-TTCTGCCAGAC
ATACCATTGACAGTCTGTTAAGCTTATGTATTTCCCTTTCAAAAGGCTTATTAAGCCATCAATCCTGTTAATGATATGCC
CTGAGCGTGACTGGAATAATTGGTTTTGAATGGTTGTACAGGTCATTGAAGGTCAAAGGGATTTTGTTATTCAGATGAAT
GATAAATGGAATTCATTTTCCCTCATGAAATATGACAAGTTCGGCCATCCTTTCGGATGCTTGAAGCCAAATTCTGCTAG
AAGCTACGAGGAATTACTTTTGTGCATCGCAGAAGGAGAAAATAATGAACCGGAGGTTGTTCCTTCGATTACACCCCCAA
ACAATGGAGTACTGCTGATTGCGAATGTACGCACCTTA-----ACCCCTAACCCCTCCCCAACCCTTTGTGAATGTGAAT
ATAGATACAAGTGCTAGTTGCCATCTGCATCATGTTTTTCCATTTCTGATGGACATCTTTTCCTGAAGGCATATCCTGTT
GAATATGGTCACATTTTCTTGGTCCCAAATGCAACTAATCAGCTATCTTCCTTTTGGGATAAAAGGATGTTTGGGCTGAT
TACAAAGATTGCCTCTGAAGTAAACAGTGCAGCGTTCCGGGTTTTCTTTGATGATGGTACATCTATTGTGCCAAAGCACA
TGTTTTTTCAGGTAATACCTTCTAGTTCTAGTGCTTAATGTTTTGAACTTACTCCAA-----------------------
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-------------AGTACATTACTATTCACCTGCCATGTGCTATACAGACCTGAATACCCAATATAATGGGAGCACTCAT
TTAGTTGTCTGGTGGTCTCATCTTCACTAAGCATTCGACTATAGGCATGCACTTTGTGCTGTAATGTATTGTCACCGATT
TACAGCATACTTCAAAGTACTTTAAT------------------------TGCCATGATGAGTAAGATTTTAAAGGGAAG
ATTGATCCTTGTAATTGTTTTATTGTTCTGTTATTACTGAATCAAAATAACTGAGTAGATTTTTTTTCCATAATAAGATA
TTGCTAAGATACTAGAACTACCAGTTTGCAGTGGTTGCTTAAGGAGAATCTCATGGTGTTATTTTTGCTAAATATTACAG
GCCTGTTACTTTGCCAATCCTTTACCAGTGGAGTCTTCCTCAACTGTTGCATTATATGATGGGGCAACCAGATCAGGCAT
TTGTGTGTCTGAAATAGTTGATTACCCTCTAAAAGCACTTGTGTTCACGAGCACCAATGTAAATACACTTGTCGATGTAG
TGAGTGAAGCATGCTTGGCTTTGCATGAGAACAATACTGTGCACAGCCTAATGATGTCCAACAACGGCAGAAATGTTTTC
TTATTCCCCCAGGTGAAACTCGCTAATACATTGTGTTCCATCTCTAAACAAATGTTTTATCAGCGAAGGAATTGTTAGCT
GTTAACCTCTGGTGTTTGATTTTAGGTGAAAAATCTGGTCACTGGCTGCTGTCTTTCTGCTTGGGAGTGCTGTGGCTACT
TTGTTTATCACACCAAAGTTGATTTCGACCGAGCTTCTGAGACCGGAATTTCCAATAGGATGGCTTCGTTCTCGTTCCAA
GATGGTGACTTTGAAGACCTGAAGAAACTCTGCTGCGCTATAGCTGATAGCCTTGTTACCTAA-----------------
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>chr5B_1_TraesCS5B01G050200
CTCATGGAGTCCAGCCGGCGCAAATTGGTATAGCTTGTGACGGAATAGAGGGTGGGTGGGCGAGATTCTCGCATTCTTCC
GCCCGATTCGGGTTTTGGTTTCTCGAAATTGCTCCTGTTCAAGCAAATGCACG------------GCGGGGGGTGGGGGC
TGTTCCTTC-----------------------------------------------------------------------
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--------AATTATCTT-----------GTGTGGAGCAATCTG---CTATGATGCAGTTTCTAGGTTAGATGATTTGCGT
TGAAGGCCCCCCGATTATTTGCTCATGGAGCAAAAAAATCTGAATGTTTCATGCCGTCGTTGGGAAATTAGGATGTTTTC
GTTGGCAC------TGAAGATATGCGGATACAGACGGCATGATGCCGTGATTTCACAACCTTTACTTGAGAAGAAATTCA
TTGTCTAGCTTGCTCACAAGTCGGAGTATGGTCCGGCATAGATCCTTTGTGGTGTTTGATTGAATATTACTCCCTCCGTC
CGGAATCGGTTGACGCTCAAACGGATGTATCTAGACGTATTTCAGTGCTAGATACATCC-GTTTGAGCATCAACTAATTC
AGGACGGAGGAAGTATGTGCTTGTATGAATGCTTGCAATTTCAGATTATTTTCCTTTTAGGGCCTGGGTTACTGTTTCGG
TCGGCTGACACTTTGTTCATGTTCAGATTGTCCTGCAAAAATACTGCATTTTATGATCGGAGAACTTGTGAGGAGCTCCT
AGAAGAAGAGCCAAGTTGATCCTGCAAAATTGGATAGCTGGTCCGGCAGGGCTGGCTTCAGAAGATCAGCCACGGCTCTA
AGGAGAGTAACCCGTGTTACACCAAGAAGGGAAAGGCAATGTGTCCATCGCTTTCCTAAGTTTCTGCTTGCATCGCCTTC
TTTCCACGGTGGCCGTGGTGCCCTCCCATCTGCAGGGGGGCATCCTTCTGATCTGACCTACCTTGCTGGTGGTGGTGCTG
---CACAATTCTGAAGTAGGCCTTTAGCATCATAGTTAGTTCAGTTAGTAGTCCATAATATTAAGAGTTGTAAGTATGGT
GTCGGCCACCAAACTAGAAGGTGGATATTGTTTTCACAGCAAGAACTCTCCTCTCGATCAACCTGAAGGTAAATAAAAGT
GCTTTGAACTTCCAAATGTTTCTCTCTTTTCGGAATGACTGTCTATAATATTCTTTAATCCTAGCATCATGAATTTCTTC
TTTTGCCTGTGTAAAACTGTAATTGTCCTCTACACTGTTCTGGCACGAAAAACAAATTAGTA-TTTTTTTCTTGTCTAAG
TATTTAGTCATCCTTTACTATTTTCTGGCACCAAAAACAAAACCAAAAAGGATGAGCT-GTGTATGTAAACTTATCCGTT
TGTTTTTCCACATATTTGAACTCTCTGCCGAGTTAGATAGCTACTCCCTCTGTTAGTGATCTAAACGCTCTTATATTTCT
TTACGGAGGGAGTATGTTATAGTTGAATTCAATGATATGCGCCTGCTTTGATGCTACAGTTGCAGTTTGGAATACTGAAG
TATCCCTAGATAATTTTACACAAGCACTTTCTT--------TTTACCAAACCTAGCTGTGTAATCACCT---TTAACCCT
TTAAAATAACAGCACATGGTCAGTTATATATTATTGTGGCATTGTAGTATTCATACATTTCTCTTTGAGCTTCAGGTGTG
AAGATACATCTTTACCGTCTTGGAATAGAACAGTGTGAACATGATACCCTCAAAAGCTTTGCATGTGCTGGTGAAGGCAG
CCCAAGTTTACTTGATACAATCATTCTTTCTCAGGTTTGTATTACCTGAGAGTTCATACAATCTTTATGAGTTATCATGG
CACCATTTTTAATAGATGATTTTCTTTGTAACAGTGGGAGAACTTTGCTCAGAAGGGCCAGTTGGGATATGATGTTACTA
CTTGCGAACTTAAGGTGCTTCTTGGATCC--------CCCCTAATTCTTGTGTCCTAGATGAAAGTAACTTTAAACATTT
GCTTGTGCATGTTGGATTCTGATACCCAAACGGCCAAACTAAAAAACACAAAACCAGAGATGTGAAA-TATAGTTTTATA
CATTTTATACGTAACCTCTTCCCTTCCTCAGTTTCCACAATCAAACTGCAGAGTGGCATGCTAATACCAAATATTCCTGC
AACACCACCTACCAAATTGTTCACATTCCCACTAATTGCCACTGTTGCTGCCCTCATTGGAACAGTCTGCCTTTCCTGTG
CTGCCAATCGTGATGGCTATGGGGGGATAGTACGGATGGGGATGTTAGGAAACATAGCAGTGGGAAATAAGAGAGAAAGG
AGCAGGAAAGATTCGATGAATAATAGTGGTTGCCACTTATAGTTATCCACATCTTAAAGCACATAACTATTTCATCTTAG
GTGGCAGAAGTTTAACTTTGAAGAAATATTGCGATTCTAGAAGTGTAATCAACCAACCAACATTTTTT-TTCTGCCAGAC
ATACCATTGACAGTCTGTTAAGCTTATGTATTTCCCTTTCAAAAGGCTTATTAAGCCATCAATCCTGTTAATGATATGCC
CTGAGCGTGACTGGAATAATTGGTTTTGAATGGTTGTACAGGTCATTGAAGGTCAAAGGGATTTTGTTATTCAGATGAAT
GATAAATGGAATTCATTTTCCCTCATGAAATATGACAAGTTCGGCCATCCTTTCGGATGCTTGAAGCCAAATTCTGCTAG
AAGCTACGAGGAATTACTTTTGTGCATCGCAGAAGGAGAAAATAATGAACCGGAGGTTGTTCCTTCGATTACACCCCCAA
ACAATGGAGTACTGCTGATTGCGAATGTACGCACCTTA-----ACCCCTAACCCCTCCCCAACCCTTTGTGAATGTGAAT
ATAGATACAAGTGCTAGTTGCCATCTGCATCATGTTTTTCCATTTCTGATGGACATCTTTTCCTGAAGGCATATCCTGTT
GAATATGGTCACATTTTCTTGGTCCCAAATGCAACTAATCAGCTATCTTCCTTTTGGGATAAAAGGATGTTTGGGCTGAT
TACAAAGATTGCCTCTGAAGTAAACAGTGCAGCGTTCCGGGTTTTCTTTGATGATGGTACATCTATTGTGCCAAAGCACA
TGTTTTTTCAGGTAATACCTTCTAGTTCTAGTGCTTAATGTTTTGAACTTACTCCAA-----------------------
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-------------AGTACATTACTATTCACCTGCCATGTGCTATACAGACCTGAATACCCAATATAATGGGAGCACTCAT
TTAGTTGTCTGGTGGTCTCATCTTCACTAAGCATTCGACTATAGGCATGCACTTTGTGCTGTAATGTATTGTCACCGATT
TACAGCATACTTCAAAGTACTTTAAT------------------------TGCCATGATGAGTAAGATTTTAAAGGGAAG
ATTGATCCTTGTAATTGTTTTATTGTTCTGTTATTACTGAATCAAAATAACTGAGTAGATTTTTTTTCCATAATAAGATA
TTGCTAAGATACTAGAACTACCAGTTTGCAGTGGTTGCTTAAGGAGAATCTCATGGTGTTATTTTTGCTAAATATTACAG
GCCTGTTACTTTGCCAATCCTTTACCAGTGGAGTCTTCCTCAACTGTTGCATTATATGATGGGGCAACCAGATCAGGCAT
TTGTGTGTCTGAAATAGTTGATTACCCTCTAAAAGCACTTGTGTTCACGAGCACCAATGTAAATACACTTGTCGATGTAG
TGAGTGAAGCATGCTTGGCTTTGCATGAGAACAATACTGTGCACAGCCTAATGATGTCCAACAACGGCAGAAATGTTTTC
TTATTCCCCCAGGTGAAACTCGCTAATACATTGTGTTCCATCTCTAAACAAATGTTTTATCAGCGAAGGAATTGTTAGCT
GTTAACCTCTGGTGTTTGATTTTAGGTGAAAAATCTGGTCACTGGCTGCTGTCTTTCTGCTTGGGAGTGCTGTGGCTACT
TTGTTTATCACACCAAAGTTGATTTCGACCGAGCTTCTGAGACCGGAATTTCCAATAGGATGGCTTCGTTCTCGTTCCAA
GATGGTGACTTTGAAGACCTGAAGAAACTCTGCTGCGCTATAGCTGATAGCCTTGTTACCTAAGCCTGCACCGTATGCAA
GCATCAACAATGTGTGCAGCGGTTCATTATGTAAAATCACCCAGAATGTTACTGCAACTATAAACATATCGTGTATCATG
CTCTCCCATTCCCCGTGTTTGGCGTGTTATGCCTAAATACTATGAAACATATGTCTGAAGACATCTGGGTTGATGAATAA
AGCTTGCTGTTCTCCTCATGAATCAATCTCTGAATATTTGCAAGGATTGTGCAATGA-----------------------
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-------------TATTTTAGCTACTACATTTGCAGTTTACAGAATCAACTTTGCAGCATTTCTGTGAGACATTGAATTA
CTTTAG-----AACTGATCCTGTGATATAGCAGGTGACTTGGTTTGTTTCACGTGGTTTGCTTCAGAAGGCACATGCCCT
TGATCTGATAGCTTTGTTGCAGAAACAGTTTTTACTTGGATGTGTTATAAATTTATATAGCTTGCGGTTGTAACTGGGAG
TTCAAAGATTGTATGTAGAGAAGGAAATTTGTTGCAGTTATAAGTTGTGCATCGACGTTAAGATGGATCTTATTACTCAT
TGCATCGGCCGCAACATCATGAGGCAGCATCGGATTCAGCAGGGTTTGTTACAGAGGCTAGGCAGCCACTGATGATGGAA
AAGAAAAA--AAACAGAAAATTGTGTATGGTTGCAGCCGGTTTTCATCTCGATCCTATGTATGGTTGCAGCCGGTTTTCA
TTTCATGGCAGTTTGGACAGTAAGCCAGTTTCTAGTGTGTGACGGTGGTAATTTTGGACCAAAAAATCCCTAGATTTAAA
CGAATTGCCATGGCAGTTTTAAAAAAATGCCCCCACCCC-TGGTGTCCTTTTCTAATGGCT-------------------
-------------------------------TTAAAAGTCCAATTGAGTCCAAACACAA-TCAACTTAAATAACTTGGAT
TTTTATGAAATAACTACTGACCAATATTTTATATTTTTGATAATGGTGTTAGTTCATTCTTGAAGAATATTTCAAATAAG
GTTACAGACAAATTTAAACAAGCCCATAATAAGTTTTA
>chr5D_1
CTCATGGAGTCCAGCCGGCGCAAATTGGTATAGCTTGTCACGGAATAGAGGGTGGGTGGGCGAGATTCTCGCATTCTTCC
GCCCGATTCGGGTTTTGGTTTCTCGAAATTGCTCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAATTATCTT-----------GTGTGGAGCAATCTG---CTATGATGCAGTTTCTAGGTTAGATGGTTCGCGT
TGAAGGCCCCCCGATTATTTGCTCACGGAGCAAAAAAATCTGAATGTTTCATGCTGTCGTTGGGAAATTAGGATGTTTTC
GTTGGCAC------T------ATGCGGACACAGGCGGCATGATGCCGTGATTTCACAACCTTTACTTGAGAAGAAATTCA
TTGTCTAGCTTGCTCACAAGTCGGAGTATGGTCCGGCATAGATCCTTTGTGGTATTTGATTGAATATTACTCCCTCCGTC
TGGAATCGGTTGACGCTCAAACGGATGTATCTACACGTATTTCAGTGCTAGATACATCC-GTTTGAGCATCAACTAATTC
AGGACGGAGGAAGTATGTGCTTGTATGAATGCTTGCAATTTCAGATTATTTTCCTTTTAGGACCTGGGTTACTGTTTCGG
TTGGCTGACGCTTTGTTCATGTTCAGATTGTCCTGCAAAAATACTGCATTTTATGATCGGAGAACTTGTGAGGAGCTCCT
AGAAGAAGAGCCAAGTTGATCCTGCAAAATTGGATAGCTGGTCCGGCAGGGCTGGCTTCAGAAGATCAGCCACGGCTCTA
AGGAGAGTAACCCGTGTTACACCAAGAAGGGAAAGGCAATGTGTCCATCGCTTTCCTAAGTTTCTGCTTGCATCGCCTTC
TTTCCACGGTGGCCGTGGTGCCCTCCCATCTGCAGGGGGGCATCCTTCTGATCTGACCTACCTTGCTGGTGGTGGTGCTG
---CACAATTCTGAAGTAGGCCTTTAGCATCATAGTTAGTTCAGTTAGTAGTCCATAATATTAAGAGTTGTAAGTATGGT
GTCGGCCACCAAACTAGAAGGTGGATATTGTTTTCACAGCAAGAACTCTCCTCTCGATCAACCTGAAGGTAAATAAAAGT
GCTTTGAACTTCCAAATGTTTCTCTCTTTTCGGAATGACTGTCTATAATATTCTTTAATCCTAGCATCATGAATTTCTTC
TTTTGCCTGTGTAAAACTGTAATTGTCCTCTACACTGTTCTGGCACGAAAAAAAAATTAGTATTTTTTTTCTTGTCTAAG
TATTTAGTCATCCTTTACTATTTTCTGGCACCACAAACAAAACCAAAAAGGATGAGCT-GTGTATGTAAACTTATCCGTT
TGTTTTTCCACATATTTGAACTCTCTGCCGAGTTAGATAGCTACTCCCTCTGTTAGTGATCTAAACGCTCTTATATTTCT
TTACGGAGGGAGTATGTTATAGTTGAATTCAATGATATGCGCCTGCTTTGATGCTACAATTGCAGTTTGGAATACTGAAG
TATCCCTAGATAATTTTACACAAGCACTTTCTT--------TTTACCAAACCTAGCTGTGTAATCACCTTTATTAACCCT
TTAAAATAACAGCACATGGCCAGTTATATATTATTGTGGCATTGTAGTATTCATACATTTCTCTTTGAGCTTCAGGTGTG
AAGATACATCTTTACCGTCTTGGAATAGAACAGCGTGAACATGATGCCCTCAAAAGCTTTGCATGTGCTGGTGAAGGCAG
CCCAAGTTTACTTGATACAATCATTCTTTCTCAGGTTTGTATTACCTGAGAGTTCACACAATCTTTATGAGTTATCATGG
CACCATTTTTAATAGATGATTTTCTTTGTAACAGTGGGAGAACTTTGCTCAGAAGGGCCAGTTGGGATATGATGTTACTA
CTTGCGAACTTAAGGTGCTTCTTGGATCC--------CCCCTAATTCTTGTGTCCTAGATCAAAGTAACTTTAAACATTT
GCTTGTGCATGTTGGATTCTGATAC--------CCAAACTAAAAAACACAAAGCCAGAGATGTGAAA-TATAGTTTTATA
CATTTTATACTTAACCTCTTCCCTTCCTCAGTTTCCACAATCAAACTGCAGAGTGGCATGCTAATACCAAATATTCCTGC
AACACCACCTACCAAATTGTTCACATTCCCACTAATTGCCACTGTTGCTGCCCTCATTGGAACAGTCTGCCTTTCCTGTG
CTGCCAATCGTGATGGCTATGGGGGGATAGTACGGATGGGGATGTTAGGAAACATAGCAGTGGGAAATAAGAGAGAAAGG
AGCGGGAAAGATTCGATAAATAATAGTGGTTGCCACTTATAGTTATCCACATCTTAAAGCACATAACTATTTCATCTTAG
GTGGCAGAAGTTTAACTTTGAAGAAATATTGCGATTCTAGAAGTGTAATCAACCAACCAACATTTTTT-T-CTGCCAGAC
ATACCATTGACAGTCTGTTAAACTTATGTATTTCCCTTTCAAAAGGCTTATTAAGCCATCAATCCTGTTAATGATATGCC
CTGAGCTTGACTGGAATAATTGGTTTTGAATGGTTGTACAGGTCATTGAAGGTCAAAGGGATTTTGTTATTCAGATGAAT
GATAAATGGAATTCATTTTCCCTCAAGAAATATGACAAGTTCGGCCATCCTTTCGGATGCTTGAAGCCAAATTCTGCTAG
AAGCTACGAGGAATTACTTTTGTGCATCGCAGAAGGAGAAAATAATGAACCGGAGGTTGTTCCTTCGATTACACCCCCAA
ACAATGGAGTACTGCTGATCGCGAATGTACGCACCTTA-----ACCCCTAACCCCTCCCCAACCCTTTGTGAATGTGAAT
ATAGATACAAGTGCTAGTTGCCATCTGCATCATGTTTTTCCATTTCTGATGGACATCTTTTCCTGAAGGCATATCCTGTT
GAATATGGTCACATTTTCTTGGTCCCAAATGCAACTAATCAGCTATCTTCCTTTTGGGATAAAAGGATGTTTGGGCTGAT
TACAAAGATTGCCTCTGAAGTAAACAGTGCAGCGTTCCGGGTTTTCTTTGATGATGGTACATCTATTGTGCCAAAGCACA
TGTTTTTTCAGGTAATACCTTCTAGTTCTAGTGCTTAATGTTTTGAACTTACTCCAA-----------------------
--------------------------------------------------------------------------------
-------------AGTACATTACTATTCACCTGCCATGTGCTATACAGACCTGAATACCCAATATAATGGGAGTACTCAT
TTAGTTGTCTGGTGGTCTCATCTTCACTAAGCATTCG-------------ACTTTGTGCTGTAATGTATTGTCACCGATT
TACAGCATACTTCAAAGTACTTTAAT------------------------TGCCATGATGAGTAAGATTTTAAAGGGAAG
ATTGATCCTTGTAATTGTTTTATTGTTCTGTTATTACTGAATCAAAATAACTGAGTAGAT-TTTTTTCCATAATAAGATA
TTGCTAAGATACTAGAACTACTAGTTTGCAGTGGTTGCTTAAGGAGAATCTCATGGTGTTATTTTTGCTAAATATTACAG
GCCTGTTACTTTGCCAATCCTTTACCAGTGGAGTCTTCCTCAACTGTTGCATTATATGATGGGGCAACCAGATCAGGCAT
TTGTGTGTCTGAAATAGTTGATTACCCTCTAAAAGCACTTGTGTTCACGAGCACCAATGTAAATGCACTTGTCGATGTAG
TGAGTGAAGCATGCTTGGCTTTGCATGAGAACAATACTGTGCACAGCCTAATGATGTCCAACAACGGCAGAAATGTTTTC
TTATTCCCCCAGGTGAAACTCGCTAATACATTGTGTTCCATCTCTAAACAAATGTTTTATCAACAAAGGAATTGTTAGGT
GTTAATCTCTGGTGTTTGATTTTAGGTGAAAAATCTGGTCACTGGCTGCTGTCTTTCTGCCTGGGAGTGCTGTGGCTACT
TTGTTTATCACACCAAAGTTGATTTCGACCGAGCTTCTGAGACCGGAATTTCCAATAGGATGGCTTCGTTCTCGTTCCAA
GATGGTGACTTTGAAGACTTGAAGAAACTCTGCTGCGCTATAGCTGATGGCCTTGTTACCTAAGCCTGCACCGTATGCAA
GCATCAACAATGTGTGCAGCGGTTCATTATGTAAAATCACCCAGAATGTTACTGCAACTATAAACATATCGTGTATCATG
CTCTCCCATTCCCCGTGTTTAGCGTGTTATGCCTAAATACTATGAAACATATGTCTCAAGACATCCGGGTTGATGAATAA
AGCTTGCTGTTCTCCTCATGAATCAATCTCTGAATATTTGCAAGGATTGTGCAATGATATTTCAGCTACTACATTTGCAG
TTTACAGAATCAACTTTGCAGTCTGTGAGACATTGAATTACTTCAGAACTGAACCTGTGATATAGCAGATGACTTGGTTT
GTTTCATGTGGTTTGCTTCAGAAGGCACATGCCCTTGATCTGATAGCTTTGTTGCAGAAACAGTTTTTACGTGGATGTGT
TATAAATTTATATAGCTTGCAGTTGTTACTGGGAGTTCAAAGATTGTATGTAGAGAAGGAAATCTGTTGCAGTTATAAGT
TGTGCATCGACGTTAAGATGGATCTTATCACTCATTGCATCGGCCGCAACATCCTGAGGCAGCATCAGATTCAGCAGGGT
TTGTTGCATGATGGAAAAGAAAAAAAAACAGAAAATTGTGTATGGTTGCAGCCGGTTTTCATCTCGATCCTATGTATGGT
TGCAGCCGGTTTTCATTTCATGGCAGTTTGGACAGTAAGCCAGTTTCTTGTGTGTGATGGTGGCAGTTTTGGACCAAAAA
AATCCCTAGATTTAAATGAATTGCCATGGCAGTTTTAAAAAATGCCCCCTACCCCCTGGCGTCCTTTTTTTAATGGCTTT
AGAAGTCCAATTGAGTCCAAACACAATCAACTTAAATAACTTGGATTTTTATGAAATAACTACTGACCAATATTTTATAT
TTTTGATAATGGTGTTAGTTCGTTCTTGAAGAATATTCAAATAAGGTTACAGACAAATTTAAACAAGCCCATAATAAGTT
TTAATACCTTCGAAAATACAACCACAAACAAGGGAAATCAACTATATTTATTGATTGGCTAATTTATTCAACATTCCAAA
TTTCGAAATATTTGGATGTTACAGACGGCTCGCCTTAAGATCTTATTGCACGTTGCTTCACATCCTGAAGCAACTTGAGG
CAGAATCAGCATGGAAAGAAGCAGGCGCAGTAACTAAGTTCAGGATATTGATGGTCCGTGTCACACTCCGCATACGGGTA
ACCCTCATGTTCGCAGTCCTCTGTGCATTGGTCACCCTTGCATTGCGAAGTAGGGTACGTCTGGCTTAACCGCCTGCAGT
GGCCTTCAGATCCTGCTGTAAAATATGGGCAACATTTGAATAACAACATTAGAAAACAAAACACTGAGAAACTATTATAT
TATTCAGATAATTATTCCAGGCAAGGCTTACCAGGAAGCAAGAGGAGTGACATGAGCAAAATTAAGCACAAGCTTGCCAT
CTTGACCTTGTCGACCTCCATATCTCCAGGAATAAACACCCAAGCAAAGAAGGATGGAATTCCAAATAGGTTAACTTAGT
AGTGCACCACTGATCCCTTCTTATAGAGATGGATGATGGAACCTTACAATAAACCAAACAGAAAAGGTTGTATATATCTG
GATGATGCAATGATGTGTTGTGTAAATTGAAAAGACACTATAGGTTGTTGTGGGTTGGTGTGTGCGCGCTCGCACGCGTG
CGTGGAATGGTGCCTTTGTTGCTTAGGTGGAACCCTAAAAAACAGAAATTGTCATATTTATCTGGATGATGCATGGTATA
TATCCAGAAGATGCAACGATACATTGTACATTGAAGAAAAGACATTCTCAGGGGTGATAAAAGACACCCTAGGTAGTTGA
TACATGTGTGTGTGTGTGTTGGTGTGAGGTATTGCCTGATGTTTGTACTGCTCAAAATGGTGCATTTGTTGGTTAGACAG
AACCCTACAAAAGGCAAACAGAAAATGTCATTATATGGATGATGCAATTGTATATATCCGAATGATGCAGCAATGTGTCA
CACACTGGAAAAAGACACCGAGACATGATAAAAAGGCACCCCGGGTTAGTTGATACATGCATGTCTTTTATGTGAGGTAT
GTCATGATATTTGTATCGCTCAAAATGGTGCCTTTGGATCTTAGCAGTAGGAAAAAAACACCCAGCGTATCACGCATTGG
ATTAGGAAATAATGTTGCTGGGGTAATTGCACTTGTCGATGTAGTAAGTGAAGCATGCTTGGCTTTGCACGAGAACAATA
TTGTGCACAGCCTAATGATGTCCAACCACGGCAGAAATGTTTTCTTATTCCCCAGGTGAAACTCGCTAATACATTGTGTT
CCATCTCTAAATAAATGTTTTATCAACAAAGGAATTGTTAGGTGTTAATCTCTGGTGTTTGATTTTAGGTGAAAAATCTG
GTCACTGGCTGCTGTCTTTCTGCCTGGGAGTGCTGTGGCTACTTTGTTTATCACACCAAAGTTGATTTCGACCGAGCTTC
TAGTAGAAATTCTGAATTGGTATAATGGCTCTTTCTTACATTACAACTTACAATACAAGAGTTTCTTACAGGAGTGAAAC
AAAACTAAAAAAAAAGATTAAAGAATAACGTTTGACAAAATGATTAATGCAAAATGATCCATTAAAGAAAAGAATTGATA
CAACAATTTGATTACTTAATCAATTAGTAGTATCCCTGCCATGATTTTCAAATCTTTTCTATTTAGTAGTCTAAGTTTCT
CGATGAGGATAATTAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTACTACATTCTCCATAGGTCCCTCTTAGA
TCTTCTTTCTCCAATCTTGGATTAGGGAAGAAGGAGATATTCGCGACTACTGGCGATTTCATTATGGGGCAGCTCATGAT
CTTCATATCGATCTATTGTCCACCTCTGTATCTATTCTTTCTTAGCTAAACAGGTGGAAGATCTATCCAATTTGGTTATA
TTATATCATGGACTCGCAAAAACGGATCTGAATTTGACTGAAATGCACGATCTTCACAGGTATCACTTTTCACGATACCT
AAAAGGTGGAATAGCGATTTTCGAACCATTTCCTATAAGAGAATGGTTTCCATTACTTTGAGAAATGGATTCTTGAGACC
GGAATTTCCAATAGGATGGCTTCGTTCTCGTTCCAAGATGGTGACTTTGAAGACTTGAAGAAACTCTGCTGCGCTATAGC
TGATGGCCTTGTTACCTAAGCCTGCACCGTATGCAAGCATCAACAATGTGTGCAGCGGTTCATTATGTAAAATCACCCAG
AATGTTACTGCAACTATAAACATATCGTGTATCATGCTCTCCCATTCCCCGTGTTTGGCGTGTTATGCATAAATACTATG
AAACATATGTCTGAAGACATCCGGGTTGATGAATAAAGCTTGCTGTTCTCCTCATGAATCAATCTCTGAATATTTGCAAG
GATTGTGCAATGATATTTCAGCTACTACATTTGTAGTTTACAGAATCAACTTTGCAGCATTTCTGTGAGACATTGAATTA
CTTCAG-----AACTGAACCTGTGATATAGCAGATGACTTGATTTGTTTCATGTGGTTTGCTTCAGAAGGCACATGCCCT
TGATCTGATAGCTTTGTTGCAGAAACAGTTTTTACTTGGATGTGTTATAAATTTATATAGCTTGCAGTTGTTACTGGGAG
TTCAAAGATTGTATGTAGAGAAGGAAATCTGTTGCAGTTATAAGTTGTGCATCGACGTTAAGATGGATCTTATCACTCAT
TGCATCGGCCGCAACATCTTGAGGCAGCATCAGATTCAGCAGGGTTTGTTGCAGAGGCTAGGTAGCCACTAATGATGGAA
AAGAAAAAAAAAACAGAAAATTGTGTATGGTTGCAGCCGGTTTTCATCTCAATCCTATGTATGGTTGCAGCCGGTTTTCA
TTTCATCGAAGTTTGGACAGTAAGCCAGTTTCTTGTGTGCGATGGTGGCACTTTTGGACGAAAAAATCCCCAGATTTAAA
CGAATTGCCATGGCAGTTTTT-AAAAATGCCCCCACCCCCTGGCGTCCTTTTTTAATGGCT-------------------
-------------------------------TTAAAATTCCAATTGAGTCCAAACACAA-TCAACTTAAATAACTTGGAT
TTTTATGATATAACTACTGACCAATATTTTATATTTTTGATAATGGTGTTAGTTCGTTCTTGAAGAATATTTCAAATAAG
GTTACAGACAAATTTAAACAAGCCCATAATAAGTTTTA
>chr5A_1
CTCATGGAGTCCAGCCGGCGCAGATTGGTATAATCTGTGACGGAATAGAGGGTGGGCGGGCGAAATTCTCGCATTCTTCC
GCCCGATTCGGGTGTAGGATTCTCGAAATTGGTCCTGTTCAAGCAAATGCACCGGAGGGGTGGGTGTGGGTGTGGGGGGG
TGTTCATTT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ATCTTGTGTACGCCTCTAGGGTGTGGAGCAATCTGGTACTATGACGCAGTTTCTAGGTAAGATGATTCGTAT
TGAAGG-CCCCCGATTATTTGCTCACGGAGGGGAAAAAACTGAATG--TCATGCCGCCGTTAGGAAATTAGGATGTTTTC
GTTGGCAGTGAAGAT------ATGGGGACACGGGCGGCATGATGCCGTGATTTCACAACCTGTACTTGAGAAGAAATGCA
TTGTCTAGCTTGCTCACCAGTCGGAGTATGGTCCGGCATAGATCCTGTGTGGTGTTTGATTGAATATTACTCCCTCCGTC
CGGAATCGG---ACGCTCAAACGGATGTATCTAGACGTATTTCAGTGCTAGATACATCCGGTTTGAGCGTCAACTGATTC
AGGACGGAGGAAGTGTGTGCTTGTATGAATGCTTGCAATTTCAGATGATTTTCTTTTTAGGACCTGGGTTACTGTTTCGA
TCGGCTGACACTTTGCTCATGTTCAGATTGTCCTGCAAAAATACTGCATTTTATGATCGGAGAACTTGTGGGGAGCTCCT
AGAAGAAGAGCCAAGTTGATCCTGCAAAATTGGATAGCTGGTCCGGCAGGGCTGGCTTCAGAAGATCAGCCACGGCTCTA
AGGAAAGCAACCCGTGTTACACTAAGAAGGGGAAGACAATGTGTCCATCGCTTTCCTAAGTTTCTGCTTGCATCGCCTTC
TTTCCACGGTGGCCGTGGTGCCCTCCCATCTGCAGGGGGGCATCCTTCTGATCTCACCTACCTTGCTGGTGGTGGTGCTG
CTGCACAAGTCTGAAGTAGGCCTTTAGCATTATAGTTAGTTCAGTTAGTAGTCCATAATAATAAGAATTGTAAGTATGGT
GTCAGCCACCAAACTAGAAGGTGGATATTGTTTTCACAGCAAGAACTCTCCTCTGGATCAACCTGAAGGTAAACAAAAAT
GCTTTGAACTTCCAAATGTTTGTCTCATTTAGAAATGACTG--TATAATATTCTTTAATCCTATAATCATGAATTTCTTC
TTTGGCCTGTCTAAAACCATAATTGTCCTATACACTGTTCTGGCACCAAAAACGTTATCCTC------------------
---------------TACTATTTTCTGGCACCAAAAACAAAACCAAAAAGGATGAGCTAGTGTATGTAAACTTATCCTTT
TGCTTTTCCACACATTTGAACTCTCTGCCGAGTTAGATAGCTA-------------------------------------
--------------TGTTATAGTTGAATT-AATGATATGCGCCTGC-TTGATGCTACAATTGCAGTTTGGAATACTGCAG
TATCCCTAGATAATTTTAGGCAAGCACTTTCTTAGTTTCCTTTTACCAAACCTAGCTGTGTACTCGCCT---TTAACCCT
TTAAAATAACAGCACATGTTCAGTTATATATTATTGTGGCATTGTAATATTCATACATTTCTCTTTGATATTCAGGTGTG
AAGATACATCTTTACCGTCTTGGTATAGAACAGCGTGAACACGATGCCCTCAAAAGCTTTGCATATGCTGGTCAAGGCAG
CCCAAGTTTACTTGATACACTCATTCTTTCTCAGGTTTGTATTACCTGAGAGTTCACACAAACTTTATGAGTTCTCATGG
CACCATTTTTTATAGATGATTTTTTTTGTAACAGTGGGAGAACTTTGCCCAGAAGGGCCACATGGGATATGATGTTACTG
CTTGTGAACTTAAGGTGCTTCTTGGACCCCCCCCCCTCCCCTAATTCTTGTGTCGTAGATAAAAGTAACTTCAAATGTTT
GCTTGTGCACGTTGGATTCCGATAC--------CCAATCT-AAAAACACAAAGCCAGAGATGTGAAAATATAGGCTTATA
CATTTTATACTTAACCTATTCCCTTCCCCAGTTTCCACAATCAAACTGCAGAGTGGCATACTAATACCAAATATTCCTGC
AACACCGCCTATCAAACTGTTCACATTCTGCG--------ACTGTTGCTTCCCTCATTAGAACAGACTGACTTTCCTGCT
CTGCCAATGGTGATGGCTATGGGGGGATAGTACGGATGGGGATGTTAGGAAACATAGCAGTGGGAAATAAGAGAGGAAGG
AATGGGAAAGATTTGATAAATACTAGTGGCTGCCACTTATAGTTATCCACATGTTAAAGCACATAACTATTCCATCTTAG
GTGGCAGAAGTTTAACTTTCAAGAAATGTTGCGATTCTAGATGTGTAAGCAACCAACCAACAGTTTTTTT-CTGCCAGAC
ATACCGTTGACAATCTGTCAAACTTATA---TTCCCTTTTAAAAAGCTTATTAAGCCATCAATCCTGTTAATGATATGCC
CTGAGCTTGACTGAAATAATTGGTTTTGAATGGTTGTACAGGTCATTGAAGGTCAAAGGGATTTTGTTATTCAGATGAAT
GATAAATGGAATACATTTCCCCTCAAGAAACATGACAAGTTCGGCCATCCTTTTGGATGCTTGAAGCCAAATTCTGCTAA
AAGCTATGAGGAATTACTTTTGTGCATTGCAGAAGGAGAAGATACTGAACCGGAGGTTGTTCCTTCAACTACACCCCCAA
ACAATGGGGTACTGCTGATTGCGAATGTACGCACCTTCAAATGACCCCTAACCCCTCCCCAACCCTCTGTGAATGTGAAT
ATAGATATAAGTGCTAGTTGCCATCTGCATCATGTTTTTCCATTTCTGATGGACATCTTTTCCTGAAGGCATATCCTGTT
GAATATGGTCACATTTTCTTGGTCCCAAATTCAACTAATCAGCTATCTTCCTTTTGGGATAAAAGGATGTTTGGGCTGAT
TACAAAGATTGCCTCTGAAGTAAACAGTACAGCATTCCGGGTTTTCTTTGATGATGGTACATCTATTGTGCCAAAGCACA
TGTTTTTTCAGGTAATACCGTCTAGTTCTAGTGCTTAATGTTTTGAACTTACTCCAAGTACTCCCCCTGTCCTGAATTAC
TTGTCGTATAAATGAATGTATCGAGACCTATTTTTAGTTCTGCATACATCCATTTCTATCCATTTTTGTGACAAAGTAAT
TTGGGATGGAGGGAGTACATTATTATTCACCTGCCATCTGCTGTACAGACCTGTCTAACCAATATAATGGGAGTAATCAT
TGAGTTGTCTGGTGGTCTGATCTTCACTAAGCATTCGACTATAGGCATGCACTTTGTGCTGTAATGCATTGTCACCGGCT
TACAGCATACTTC---GTACTTTAATTGCTTCTAACCTTTTACTTTAATATGCCATGATGAGTAAGATTTTAAAGGGAAG
ATTGATCCA------TGTTTTATTGTTTTATTATTAATGAATCAAAATAAGTGAGTAGAA-TTTTTTCCATAATAAGATA
TTGCTAAGATACTAGAATTACCAGTTTGCAGTGGATGCTTAAGGAGAATCTCATGGTGTTATTTTTGCTAAATATTACAG
GCCTGTTACTTTGCTAATCCTTTACCAGTGGAGTCTGCCTCAACTGTTGCATTATATGATGGGGCAACCAGATCAGGCAT
TTGTGTGTCTGAAATAGTTGATTACCCTCTAAAAGCACTTGTGTTCACCAGCACCAATGTAAATGCACTTGTCGATGTAG
TCAGTGAAGCATGTTTAGCTTTGCATGAGAAAAATACTGTGCACAGCCTAATGATGTCCAACAATGGCAGAAATGTTTTC
TTATTCCCCCAGGTGAAACTTGCT-ATACATTGTGTTCCATATCTAAAAAAATGTTTTATCA-CCAAGGAATTGATAGGG
GTTAATCTTTGGTGTTTGATTTTAGGTGAAAAATCTGGTCACTGGCTGCTATCTTTCTGCCTGGGAGTGCTGCGGCTACT
TTGTTTATCAAACCAAAGTTGATTTTGACCGAGCTTCTGAGACCGGAATTTCCAATAGGATGGCTTCGTTCTCGTTCCAA
GATGGTGAATTTGAAGACCTGAAGAAACTCTGCTGTGCTATAGCTGATGACCTCGTTACCTAAGCCTGCGGCATATGCAA
CCATCAACAGTTTGTGTAGCGGTTCATTATGTAAAATCACCCAGAATGTTACTGCAACTATAAACATATCGTGTATCATG
CTCTTACATTCCCCGTGTTTGGCGTGTTATGCCTAAATACTATGAA----------------------------------
--------------------------------------------------------------------------------
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--ACATATGTCTGAAGACATCCGGGTTGATGAATAAAGCTTGCTGTTCTGCTCATGAATCAATCTCTGAATA-TTGCAAG
GATTGTGCAATGATATTTCAGCTACTACATTTGCAGTTTACAGAAACAACTTTGCAGCATTTCTGTGAGACATCGAATTA
CTTCAGAACTGAACTGAACCTGTGATATAGCAGATGACTTGGTTTGTTTCAGGTTGTTTGCTTCAGAAGGCACATGCCCT
TGATCTGATAGCTTTGTTGCAGAAACAGTTTTTACTTGGTTGTGTTATAAATTTATATAGCTTGCAGTTGTCACTGGGAG
TTCAAAGATTGTATGTAGAGAAGGAAATCCGTTGCAGTTATAAGTTGTGCATCGATGATAAGATGGATCTTATTACTCAT
TGCATCGGTCGCAACATCCTGAGGCAGCATCAGATTCAACAGGGCTTGTTGCAGAGGCTAGGCAGCCGCTGATGATGGAA
AAGAA----AAAACAGAAAATTGTGTATGGTTGCTGCCGGTTTTCATCTCGATCCTATGTATGGTTGCAGCCGGTTTTCA
TTTTGTGGCAGTTTGGACAGTAAGCTAGTTTCTCGTGTGTGGCAGTTTTGGA-------CAAAAAATCCCCAGATTTAAA
CGAATTGCCATGGCAGTTTTT-AAAAATGCCGACCCCCACTGAAGAAACTGCCAGCCGCGCCGTTCGCAATTGCTATCCT
GACTATTGGCTTCCTTTCTTTAATGGCTTTATTAAAAGTCCAATTGCATCCAAACACAATTCAACTTAAATAACTTGGAT
TTTTATGAAATAACTTCCGACCAATA-TTTATATTTTTGATAATGATGTTAGTTCATTCTTGAAGGATATTTCAAATAAA
GTTACAGACAAACTTAAACAAGCCCATATAAGTTTTA-
>SNPs
--------------------------------------------------------------------------------
----------------------------------------------------S-------------S---S-SS-----S
-----S--S-----------------------------------------------------------------------
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---------------------------------------------------------------------------S----
-------------------------S------------------------------------------------------
---------------SSSSSS-------S----S----------------------------------------------
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-------------------------------------------------------------S------------------
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----------------------------------------------------------S---------------------
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---------------------------------S-----------S----------------------------------
--------------------------------------------------------S-----------------------
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------------------------------------------------------------S-------------------
-------------------------SSSSSSSS-------------------S---------------------------
----------S---------------------------------------------------------------------
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---S-------------S--------------------------------------------------------------
----------------------------------------------------------------------S---------
---------------------S----------------------------------------------------------
------S-------------------------------------------------------------------------
-------------------------S------------------------------------------------------
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-------------------------------------------------------------------------S------
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------------------------------------------------------------S-------------------
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----------------------------------------------------------------S---------------
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--------------------------------------------------------------S-S-------------S-
-----S------------------------------------------------------S-------------------
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------------------------------------------------S-------------------------------
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--------------------------------------------------------S--------S--------------
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------------------S-------------------------------------------------------------
---S-------------S---------------S-----------------S----------------------------
-----------------------------------------------------------------S-----S--------
----------------------------S---------------------------------------------------
------------------S------------S------------------S-----------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------S-------------------S---------
--------------------SS---------------------S------------------------------------
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--------------------------------------
>forward_147
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-----------------------------------------------TGTTCAAGCAAATGCACGGC-------------
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>reverse_1966
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---------------------------------------------ACCCTCAAAAGCTTTGCATGT--------------
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>forward_1739
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---------------------------------------CGCCTGCTTTGATGCTACAG---------------------
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>reverse_2711
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----------------------------------------------------------------------TCTGCCAGAC
ATACCATTGACA--------------------------------------------------------------------
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>forward_2268
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-----TGCATGTTGGATTCTGATACCCA----------------------------------------------------
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>reverse_4301
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------------------------------------------------------------TTGGGAGTGCTGTGGCTACT
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>forward_2578
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-----------------------------------------------------------------------------AGG
AGCAGGAAAGATTCGATG--------------------------------------------------------------
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>reverse_4626
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-----------------------------------------------------------------TGGGTTGATGAATAA
AGCTTGCTG-----------------------------------------------------------------------
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--------------------------------------
