>input_sequence_24978
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------------------------------------------------ATGCGCTCCATTTCTTCCGCCATGAGGTCGCT
CCTCCTCTCCG---CC------------CCCTCCCCCGCCTTCCTGCCCCGCTCCACCGCCCTCCGCCCGCTCCTCTCGC
TCCCTTTCCGGCCGGATCTTTCCCGCCCCAGGCCCCTCGGCCCTCCGGCCAGGTCGCTCTCTAAGAAGGCGGCGATGACG
GCGGCGGCGGCGGCGGCCAAGGCCCGGATAGACGGCCGTGGTTCGGCGATGGAGGCCCGGGAAGCGCAGTCCGGCGAGAT
TCACGTCATCGTCGGCCCCATGTTCGCTGGCAAGACCACCGCGCTTCTCCGCCGCGTCCAGGCCGAGGCCGGCACCGGCA
GGTACTCACCCCGTCCATTCTCTT----TCTTGTTTACTGATTCATTTCGCTGACTGCCAGTGAACCCCAGTTCCTGTCA
GACAGTCAGGGTTTCTGATAAGACCAAAGAAAAATCAACGCTCACAAGAGTAGGCATTAAGCCAAGTAC-----------
-------------------------------------------------------------------AGTAGTATATAAT
ACTAATGTGCTTCTTATATAAATCTAATTGTCAATATCTTGCATAGAAAACTGGTGGCCTGTCAGAGGTTCACTGGTCAG
TGATGGAATAATTCATGATCTTGGCTAAGTATATAATAACTAATCTTC---TTA----TATAACTCTAATTGTCAATACC
TTGCATAGAAAACTGGTGGTCTGTCAGAGTTTCACTGGTCTGTGATGGCATAGTCAAGGATCTTAGCACACTCAAACTGA
TATTTAGTTTCTTTCTTAAAAAGGCTGCTACGTCTCGAGTGATTTTCTTAGTCAGCAAGAAGATTGTTATTGGAGAGATT
TTGATGG-AAAAAATGCTTCTTGTTCTTTCTGTCTCCTGAATTCGACGCTTTTTGACTTCACCATTTACTTCCATATGTG
GGACAATTTGTCGTGGTAGAATTTTGACATCTTTGCTCCTTGCAATACAGGACTGTGGCACTCATAAAGTCTGACAAAGA
CAATCGATATGGATTGGATTCTGTTGTGACCCATGATGGCACAAAGATGGCATGCTGGGCTCTACCAGAGCTTTCAACTT
TCCAAGATAAATTAGGGAGAGAGGCTTATGATAAGGTGTGTCAAACACTTTCACCCTTCAATTTGGTTAATCATGCTGTG
CACTGTGAATTACTACTGCCTTGCAAATATTTTAGTTCTTTCAATGGATGCTTCAAACATCACTCTGCTATTGTTTGGTA
GTCTTATTTCTCGC-GCAATGTATTGTTACTCCATTTTATGCCGTATTGCTTCAGATTCTTTTTGCGAAAATGTGCACAA
AAATTATACCTTGACAGTGCTTTCTCA--ACAAGGTAGAAAAGAGAGGGATCTAGACTGTTGCTATCTGTGCTTGTGCTA
GCAGTGAATTCATAAAAGTAAATGTGTCATCCAGCATTATTTGAAAAGGAGATCTGTATGCCTATGCAAAATGCTATCAT
TTGGACCTGCACAGGTGGAAAAGTTTAATATTGGAGTGGTAGTTGAATGATCTTGGGCAT-GTTTGGTTGGATGCCACAA
TATTGCACAGTTAAGTTAGCCAGCTTTTACTTTGTTATGTTAATGTCTGGTTCTTCTCTGAACTTGTCATGTTTCACCTC
GTTTGACCTATAACCCACATTTCAAGGTCATGTTATTTGGTCACACTGAGGAAGGTGAATCCACCCAGTCTGTGGCTACA
AAAAATTGTTTTTGCTCTTGGCCTGAAATAGCAGTAATGCTCCTGTTTTCCATTTAGCTGAGGTTTGTG---AAAGAAGT
GAACATTGAGTAATTGTGGCAAGGTAGTTGACTGGAAAACTTACTGCCTCCAATCAAAATATGTTATGGTTGACTTTTCA
TGGTTGCTGGTAGCCATTTGTTTTTCAATAATATATTTGCAAGCCTGTATAAATTGCCAAATGTACTTGTGTTTATTTGA
ACAGTCTATGCCTGAGAAGCCATTACTGATCAAACAACAAAAACTTTGA-CTAAAAGCATCCCATGTTGAAAATTGACGA
GCTTGTAATCAGAGGACCTTGTTTTGTCACATGATAGCAGGAGGCAGTTTGTCATGCTTAGAGTTCATCTACTCACCTGA
TTTAGTAA----ATTGTCAATGATATGGGTTGACACTAGCTAATCTGTTATTCAGCCATTCTTAAAGAATACTCCCTCCG
TCCCAAAATAAGAGTCTCAAAATGTACTAAATTTAGTACAAAGTTGAGACACTTATTTTGGGACGGAGGGAGTACCTGTC
TGTGCGAACTTTCTTTTATCTGGTTATCATCACAACTTATCGTACAGTTGCTATGTGAGATGGTACCACCTCCTATCTGT
ACTGTTGCTATGGGAAATGGCCTGGAAGCTTTAGCCAGCCAATGCTGGTTGAGATAAGAGCTGTTGGTTTTTTCATGTCA
TTGTGTAGCATGGTGGTATTGAAGCTGTTGGTTTTGGTTGTCTGTAAGAATCTCATCAAAATTTGCTGCTACAGGTAGAT
GTCATAGGTATCGATGAAGCCCAGTTCTTCGATGATCTTCATGATTTTTGCAGCAAAGCTGCTGATCATGATGGAAAAAT
CATTGTGGTTGCAGGGCTAGATGGTGATTACAAAAGGTACTTGCTGAATGATTTATCCTGT--AACTTGTTTAGTTTCCC
TATGACTTGGCCATTTGCTGAATCT---------------AAGGCTGTTATATAGATAAAATCATCCAAATGGTCCAAAT
TTCATTCAGAAGGTATTGCAATTCTTTTTT-TTATCATGCCTACTGTTTGATGATCGAGTTGTTCCACAGGAACAAGTTT
GGCTCAGTGCTGGACATCATTCCCCTGGCCAACTCGGTCACCAAGCTGACAGCACGGTGTGAGTTGTGCGATCGCCGGGC
GTCCTTCACACTGAGGAAGACACAGGAAACCAGGACCGAACTCATTGGTGGAGCCGATGTGTATATGCCTGTGTGCAGGC
AGCACTACCTGGACGGGCAGATTGTCATCGAGGCCACAAGGATTGTCATGGATATTGAAAGATCCACGGAAGTAGCTCGC
TGCTAG--------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr1B_1_TraesCS1B01G396300
CTATGATGTTTGCCTCAAAAGGGAGGGTTAGAAAACACAGTTTTGCTAGAACTCATCTAGATAAGATATAATTTGGTCTC
ATTCACCTTTCATAGCCATTGGATATGATGCTATAAGATGCGTGTGTGCTGACGTGGGTTGTATCTTTTCTTGTTTTCAA
AGTGAATGAGATCAAATTATATCTCATCTAGCATGGTACGAGACGAGCGGGACGATGCTCAAAGCCAGTTTCGAAGCGGA
TTCCTCACTGAGCCCGCCTTTGAGCAGATCTTTTAACGCCTCGTTCCGATGCGAGTCTCCTAGTTGACAGAAGCATTGTA
TATTTATAGGACCA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AAATCAACTAGGATAGTGAG--TACAGATTCATAAC
TGGAAAGGGCATGCAGATGGAGGAGGGTCGGCCGGAGTTGAGAGAGCGATGGGCATCATCGTTCCAGAG-----------
--------------------------------------------------------------------------------
--------------------------GGGACGGAGTTGCGTTTTTTTTTTTTTTGAGAAAAATAAAATAGGGCAGAGTTT
CGTGAGGGCCAACCTGGGCCGTGGCCCGCCCAAGCAAGCC-TCTTGGAGCAGAAGAATAAT--CTGTTCATAGGCCCAAG
CCCATGCCTGTCACAGCGTTCGACGAGATAGCAGCCCAGCGCCCAGCGCCCAGGAGCTCACAACCCT-----CTCGCAGC
ACTCAGCACACCGCAGCCGCCGGCCGGCCGCCGCCCCACGGGTGACCGTCAGCCGCCGCCACCGCCCACCGACAACCGTC
CACCGGCGCACACCAGCCGCCGCCCACGGCCGCCCCTATCGATCTGTAGACCCGCTCGCCTCCGCGTCA----CCATACA
CGCGTTCCCCATCCCACCTCCCCCGCAAG-CC-AAGCCGCCGCCACCCTC-----CCCCGTCGTCCCGCCAAAACCCTAG
CCAAAAATTCCCCATTCCCTCCACGAAAGATTCAAACCCCGCCCCCAATTTTCAATCCTCCTCCCGCCGGACCCGATCCC
ACTCCCACCAACCCTCCCGAGAAAACTACCCATTAAAATCCCTCCCGGATGCGCTCCATTTCTTCCGCCATGAGGTCGCT
CCTCCTCTCCG---CC------------CCCTCCCCCGCCTTCCTGCCCCGCTCCACCGCCCTCCGCCCGCTCCTCTCGC
TCCCTTTCCGGCCGGATCTTTCCCGCCCCAGGCCCCTCGGCCCTCCGGCCAGGTCGCTCTCTAAGAAGGCGGCGATGACG
GCGGCGGCGGCGGCGGCCAAGGCCCGGATAGACGGCCGTGGTTCGGCGATGGAGGCCCGGGAAGCGCAGTCCGGCGAGAT
TCACGTCATCGTCGGCCCCATGTTCGCTGGCAAGACCACCGCGCTTCTCCGCCGCGTCCAGGCCGAGGCCGGCACCGGCA
GGTACTCACCCCGTCCATTCTCTT----TCTTGTTTACTGATTCATTTCGCTGACTGCCAGTGAACCCCAGTTCCTGTCA
GACAGTCAGGGTTTCTGATAAGACCAAAGAAAAATCAACGCTCACAAGAGTAGGCATTAAGCCAAGTAC-----------
-------------------------------------------------------------------AGTAGTATATAAT
ACTAATGTGCTTCTTATATAAATCTAATTGTCAATATCTTGCATAGAAAACTGGTGGCCTGTCAGAGGTTCACTGGTCAG
TGATGGAATAATTCATGATCTTGGCTAAGTATATAATAACTAATCTTC---TTA----TATAACTCTAATTGTCAATACC
TTGCATAGAAAACTGGTGGTCTGTCAGAGTTTCACTGGTCTGTGATGGCATAGTCAAGGATCTTAGCACACTCAAACTGA
TATTTAGTTTCTTTCTTAAAAAGGCTGCTACGTCTCGAGTGATTTTCTTAGTCAGCAAGAAGATTGTTATTGGAGAGATT
TTGATGG-AAAAAATGCTTCTTGTTCTTTCTGTCTCCTGAATTCGACGCTTTTTGACTTCACCATTTACTTCCATATGTG
GGACAATTTGTCGTGGTAGAATTTTGACATCTTTGCTCCTTGCAATACAGGACTGTGGCACTCATAAAGTCTGACAAAGA
CAATCGATATGGATTGGATTCTGTTGTGACCCATGATGGCACAAAGATGGCATGCTGGGCTCTACCAGAGCTTTCAACTT
TCCAAGATAAATTAGGGAGAGAGGCTTATGATAAGGTGTGTCAAACACTTTCACCCTTCAATTTGGTTAATCATGCTGTG
CACTGTGAATTACTACTGCCTTGCAAATATTTTAGTTCTTTCAATGGATGCTTCAAACATCACTCTGCTATTGTTTGGTA
GTCTTATTTCTCGC-GCAATGTATTGTTACTCCATTTTATGCCGTATTGCTTCAGATTCTTTTTGCGAAAATGTGCACAA
AAATTATACCTTGACAGTGCTTTCTCA--ACAAGGTAGAAAAGAGAGGGATCTAGACTGTTGCTATCTGTGCTTGTGCTA
GCAGTGAATTCATAAAAGTAAATGTGTCATCCAGCATTATTTGAAAAGGAGATCTGTATGCCTATGCAAAATGCTATCAT
TTGGACCTGCACAGGTGGAAAAGTTTAATATTGGAGTGGTAGTTGAATGATCTTGGGCAT-GTTTGGTTGGATGCCACAA
TATTGCACAGTTAAGTTAGCCAGCTTTTACTTTGTTATGTTAATGTCTGGTTCTTCTCTGAACTTGTCATGTTTCACCTC
GTTTGACCTATAACCCACATTTCAAGGTCATGTTATTTGGTCACACTGAGGAAGGTGAATCCACCCAGTCTGTGGCTACA
AAAAATTGTTTTTGCTCTTGGCCTGAAATAGCAGTAATGCTCCTGTTTTCCATTTAGCTGAGGTTTGTG---AAAGAAGT
GAACATTGAGTAATTGTGGCAAGGTAGTTGACTGGAAAACTTACTGCCTCCAATCAAAATATGTTATGGTTGACTTTTCA
TGGTTGCTGGTAGCCATTTGTTTTTCAATAATATATTTGCAAGCCTGTATAAATTGCCAAATGTACTTGTGTTTATTTGA
ACAGTCTATGCCTGAGAAGCCATTACTGATCAAACAACAAAAACTTTGA-CTAAAAGCATCCCATGTTGAAAATTGACGA
GCTTGTAATCAGAGGACCTTGTTTTGTCACATGATAGCAGGAGGCAGTTTGTCATGCTTAGAGTTCATCTACTCACCTGA
TTTAGTAA----ATTGTCAATGATATGGGTTGACACTAGCTAATCTGTTATTCAGCCATTCTTAAAGAATACTCCCTCCG
TCCCAAAATAAGAGTCTCAAAATGTACTAAATTTAGTACAAAGTTGAGACACTTATTTTGGGACGGAGGGAGTACCTGTC
TGTGCGAACTTTCTTTTATCTGGTTATCATCACAACTTATCGTACAGTTGCTATGTGAGATGGTACCACCTCCTATCTGT
ACTGTTGCTATGGGAAATGGCCTGGAAGCTTTAGCCAGCCAATGCTGGTTGAGATAAGAGCTGTTGGTTTTTTCATGTCA
TTGTGTAGCATGGTGGTATTGAAGCTGTTGGTTTTGGTTGTCTGTAAGAATCTCATCAAAATTTGCTGCTACAGGTAGAT
GTCATAGGTATCGATGAAGCCCAGTTCTTCGATGATCTTCATGATTTTTGCAGCAAAGCTGCTGATCATGATGGAAAAAT
CATTGTGGTTGCAGGGCTAGATGGTGATTACAAAAGGTACTTGCTGAATGATTTATCCTGT--AACTTGTTTAGTTTCCC
TATGACTTGGCCATTTGCTGAATCT---------------AAGGCTGTTATATAGATAAAATCATCCAAATGGTCCAAAT
TTCATTCAGAAGGTATTGCAATTCTTTTTT-TTATCATGCCTACTGTTTGATGATCGAGTTGTTCCACAGGAACAAGTTT
GGCTCAGTGCTGGACATCATTCCCCTGGCCAACTCGGTCACCAAGCTGACAGCACGGTGTGAGTTGTGCGATCGCCGGGC
GTCCTTCACACTGAGGAAGACACAGGAAACCAGGACCGAACTCATTGGTGGAGCCGATGTGTATATGCCTGTGTGCAGGC
AGCACTACCTGGACGGGCAGATTGTCATCGAGGCCACAAGGATTGTCATGGATATTGAAAGATCCACGGAAGTAGCTCGC
TGCTAGTTAGGGGTGTGTG--CCTTGCCCAGAATATCCCTCTCTTCAGTGCGTTATTCATCCAACAGCGTGTTGAGATGT
GCTACCAGTGTGTACCTGTTATTGATCATCTGTGGCAGCATGCCAGCCTGAGTTTCAGATTATGAGGCAATGCCATATTA
CCATAGGAGAACATAATTAAGTTGCAATTTGAGCAGATTGTAAATATTTACCAGTTGGGAATGTTGGTGCAAACAGCTCT
TCTTT-TAGAATACCCACCTGTTGTGACACAATGGG--------------------------GCATAAGACAGATTCTGG
CCGGGAAGCAGTGCGT--GTAATATGCGTTTATTGGTTAAGAAACATTGATTGGCATGAAATTGTTAGTCCCTGTATGAG
GTAGAATGAGAAACTGAAGAGGTAACAAATGGTTATGTATTTATTTGTGAGCATGACTTATAGTACGTTGTAATTTGGAT
GCTCCAGTTTGGAAATATTGTGTGTGCAGAAACAATCTTTTGGTACACATT--AAGTGTTAGTCAAAAAGACATGATCTG
CACAGCTTAGGTTGATGCTTTTGGTTGAGCCCAGTTCTGCTCTCTTTGACAGGCCTTCATCTCCTTGATGGATGCGGGCG
AGGTTGTGGGGCTAAGCAACGCCCATTTGGCCATCCGTTTGGCCTGGGCCTGATGTGCAGAGAATCACTCGGCGCAGCGC
CCGTAGTGCTCTCCATTTATCAAGAACTAAAACCACGGCAAGAGTATGTTTTTGACATAGTTGTGTTTGCTTCTGAACGT
CAAATTCTCACATGTGATGTTATCCGTTAAGCTGTTTTATGAAGGCACGCGAGTTGATGGGGGTCTGAGTGTCGGTAATA
CTTCATCTGGTGCACCAAAAACCTACTAGAACCAAAAACTGTGGTGCTAAAAGCCCTGTCAGTAAAAATAAAAAACCTTG
CCCAGTGGCATGGTTTGGTTTGTCTGGAGCATAGTTGTTTGCACAATCGGATGTTGTGTGATGACTCCAATTTACATAA
>chr1D_194
TGATACGAT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------ACGAGCGGGACGATGCTCAAAGCCAGCTTCGAAGCGGA
TTCCTCGCTGAGCCCTCCTTTGATCAGATCTTTTAACGCTTCGTTCCGATGCGAGTCTCCTAGTTGACAGAAGCATTATA
TATTTATATATATGTGAAGGCTCTGAACAAAAATCTGTAGAAATAAGCGCGGCAGAGAAGGATTGGCAAGAGGTGGCTCA
CTGGCCCTCTGGCCCAGCTTGCGTGTTTCCTGCCTTGGACTTGAGCTCGCTCTGCTGCTTCTCTTGACTTTCAGCATGTC
TCCGGCCCTTGAGAAAAAGGGAAATTCAATATTTAAGCCATTGAGATACTCGGTACATTATGATTTTCTTTTTGAAACAG
TTACACAATCATCTCGACGTCACAAGAGCCATGCTGCTAACTCCAAATTAACCAGGATAGTATATATACAGATTAATAAG
TGG-AAGGGCATGCAGATGAGGAGGAA-CGGCCGGAGTTGAGAGAGAGATGGGCATCATCGTTCTGGGGTACAGGAGGAG
AAGAGAAGAGAAGAGAAGATGGGGCTTACATCATGCCGTCCGCCGTGCTCCTCTGAGCCAGGTCGCCGGCCGCCGGAGGG
CGCGCTCCTTGCCGGCTGCTGCGTGCGGGGCGGAGTTACGTTTTTTTTTTGAGAA--------AAAATAGGGCAGAGTTT
CGTGAGGGCCAACCTGGGCCGTGGCCCGCCAAAGCAAGCCTTCTTGGAGCAGAAGAACAAC--TCGTTCCTAGGCCCAAG
CCCACACCTGTCACAGAGTTCGACGAGATAGCAGCCCAGCGCCCCGCGCCCAGGAGC-------TCACAACCCTCGCAGC
ACTCAGCACACCGCAGCCGCCGGCCGGCCGCCGCCCCACGGGTGACCGTCA-----CGCCGCCGCCCACCGTCCACCGTC
CACCGGCGCACGCCAGCCGCCGCCCACGGCCACCCCTATAGATTCGGAGACCGGCTCGCCTCCCCGTCACCATCCATCCA
CGCGTTCCCCTTCCCACCTCCCCCGCCAGGCC-AAGCCGCCGCCACCCTT-----CCCCGTCGTCCCGCCAAAACCCTAG
CGAAAAATTCCCCATTCCCTCCACGAAAGATTCAAACCCCGCCCACAATTTTCAATCCTCCTCCCGCCGGACCCGATCCC
ACCCCCACCTACCCACCCGAGAAAACTACCCATTAAAATCCCTCCCGGATGCGCTCCATTTCTTCCGCCATGAGGTCGCT
CCTCCTCTCCGGCCCC------------TCCTCCCCCGCCTTCCTCCCCCGCGCCACCGCCCTCTGCCCGCTCCTCTCGC
TCCCTTTCCGGCCGGATCTTTCCCGCCCCAGGCCCCTCGCCCCCCCGGCTCGGTCTCTCTCTAAGAAGGCAGCGCCGACG
GCGGCGGCGGC------CAGGACTCGGTTAGACGGCCGTGTTCCGGCGATGGAGGCCCGGGAAGCGCAGTCCGGCGAGAT
TCACGTCATCGTCGGCCCCATGTTCGCTGGCAAGACCACCGCGCTTCTCCGCCGTGTCCAGGCCGAGGCCGGCACCGGCA
GGTACTCACCCCCGTCCAGTCTCCCCTCTCTTGTTTACTGATTCATTTCGCTGACTGCCAGTGAACCCCGGTTCCTGTCA
GTCAGTCAGGGTTTCTGATAAGACCAAAGAAAAATCAACGCTCAGAAGAGTGTGTATTAAGCCAAGTACTCCCTCCGTAA
ACTAATATAAAAGCGTTTAGAATACTAAAGTAGTGATCTAAACACTCTTATATTAGTTTACAGAGGGAGTAGTATATAAT
ACTAATCTCCTTCTTATATAAATCTAATTGTCAATAGCTTGCATAGAAAACTGGTGGCCTGTCAGAGGTTCGCTGGTCAC
TGATGGAATAATTCATGATCTTGGCTAAGTATATAATAACTAATCCTC---TTCTTAGTATAACTCTAATTGTCAATAGC
TTGCATAGAAAACTGGTGGCCTGTCGGAGTTTCACTGGTCAGTGATGGCATAATCAATGATCTTAGCACACTCAAACTGA
TATTTTCTTTCTTTCTG-AAAAGGCTGTTATGTTATGAGTGATTTTCTTAGTCAGCAAGAAGATTGTTATTGGAGAGATT
TTGATGAAAAACAATGCTTCTTGCTCTTTCTGTCTCCTGAATTCCATGCTTTTTGACTTCACCATT--------TATGTG
GGACAATTCGTTGTGGTAGAATTTTGACATCTTTGCCCCTTGCAATACAGGACTGTGGCACTCATAAAGTCTGACAAAGA
CAATCGATATGGATTGGATTCTGTTGTGACCCATGACGGCACAAAGATGGCATGCTGGGCTCTACCCGAGCTTTCAACTT
TCCAAGATAAACTAGGGAGAGAGGCTTATGATAAGGTGTGTCAAACACTTTCAGCCTTCAATTTGGTTAATCATGCTGTG
CACTGTGAATTACTACTGCCATGCAAATATTCTAGTGGTTTGAATGGATGCTTCAAACATCACTCTGCTATTGTTTGGTA
GCCTTATTTCTCGC-GCAATTTATCGTTTCT------------------------------------------TGCACAA
AAATTATACCTTTACAGTGCTTTCTCA--ACAAGGTAGAAAAGAGAGTGATCTAGATTGTTGCTATCTGTGCTTGTGCTA
GCAGTGAATTCATAAAAGTAAATGTGCCATCAAGCATTATTTGAAAAGGAGATCTGTATGTCTATGCAAAATGCTATAAT
TTGGACCTGCCCAGATGGAAAAGTTTAATATTGGAGTGGTAGTTGTATGATCTTGGGGTGCGTTTGGTTGGATGCCACTA
TAATGCACAGTTAAGTTAGCGAGCTTTTACTTTGTTATGCTAATGTCTAGTTCTCC---GAACTTGTCATGTTTCACCTC
GTTTGACATATAACCCACATTTCAAGGTCAATTTATTTTGTCACACTGAGGAAGGTGAATCCACCCAGTCTGTGGCTACG
AAAG-TTGCTTTTGGTCTTGGCCTGAAATAGTAGTACTGCTCCTGTTTTCCATTTAGCTGAGATTTGTGAATAAAGAAGT
GAACATTGAGTAATTGTGGCAAGGTAGCTGACTGGAAAACTTGCTGCGTCCAATCAAAATATGTTATGGTTGACTTTTCA
TGGTTGCTGGTAGCCATTTGTTTTTCAATAATATATTTGCAAGCCTGTAGAAATTGCCAAATGTACTTGTGTTTATTTGA
ACAGTCTATGCCTGAGAAGCCATTACTGATCAAACAACAAAAAATTCGATCTACAAGCATCCTATGTTGAAAATTGACGA
GCTTGTATTCAGAGGACCTAGTTTTGTCACATGATAGCAGGAGGCAGTT-GTCATGCTTAGTGTTCATCTACTTACCTGA
TTTAGTAA----ATTGTCAATGATATGGATTG--ACTAGCTAATCTGTTATTCAGCCATTCTTAAAAAAAATCTGTTTG-
--------------------------------------------------------------------------------
TGTGCGAACTTTCTTTTATCTGGTTATCATCACAACTTATCGTACAGTTGCTACGTGAGATGGTACCACCTCCTATCTGT
ACCGTTGCTGTGGGAATTGGCCTGGAAGCTTTAGCCAGCCAACGCTGGTTGAGATAAGAGCTGTTAGTTTTTTCATGTCA
TTGTGTAGCATGGTGGTATTGAAGCTGTTGGATTTGGTTGTCTGTAAGAATCTCATCAAAATTTGCTGCTACAGGTAGAT
GTCATAGGTATCGATGAAGCCCAGTTCTTCGATGATCTTCATGATTTTTGCAGCAAAGCTGCTGATCATGATGGAAAAAT
CGTTGTGGTTGCAGGGCTAGATGGTGATTACAAAAGGTACTTGCTGAATGATTTATCTCGTAAAACTTATTTAGTTTCCC
TATGACTTGGCCATTTGCTGAATCTCTGTACATCCCCTAAAAGGCTGTTAAATAGATAAAATCATCCAAATGGTCCATAT
TTCATTCAGAAGGTATTGCAATT---TTTC-TTATCATGCCTACTGTTTGATGATTGAGTTGTTTCACAGGAACAAGTTT
GGCTCAGTACTGGACATCATTCCCCTGGCTAACTCGGTCACCAAGCTAACAGCACGGTGTGAGCTGTGCGATCGCCGGGC
GTCCTTCACATTGAGGAAGACACAGGAAACCAGGACCGAACTCATTGGTGGAGCCGATGTGTATATGCCTGTGTGCAGGC
AGCACTACTTGGACGGGCAGATTGTCATCGAGGCCACAAGGATTGTTATGGATATTGAAAGATCCACGGAAGTAGCTCGC
TGCTAGTTAGGGGTGTGTGTGGCTTATCCAGAATATCCCTCTCTTCAGTGTGTCATTCATCCAACAGCGTGTTGAGATGT
GCTACCAGTGTGTACCTGTTATTGATCATCTGTGGCAGCATGCCAGCCTGAGTTTCAGATTATGAGGCGTTGCCATATTA
CCATAGGAGAACTTAATTAAGTTGCGATTTGAGCAGATTGTAAATATTTACCAGTTGGGAATGTTGGTGCAAATAGCTCT
TCTTT-TAGAATACCCACCTGTTGCGACACAATGGG--------------------------TTATAATACAGTTTCTGG
CTGGGAAGGGAATGCTTAGTAATATGCGTTTGTTGG-TTACAAACATTGGTTGGCATGAAATTGTTTGTCTC--TATGAG
GTAGAATGAGAAACTGAAGAGGTAACAAATGGTTATGTATTTATTTGTGAGCATGTCTTATACAC---TGTAATTTGGAT
GCTCCAGTTTGGAAATATTGTGTGTGCAGAAACAATCTTTTGGTATACACATCAAGTGTTAGTCGAAATGACACGATCTG
CACAGCTTAGGTT-------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr1A_475
--------------------------------------------------------------------------------
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---------------------------------------------------------------AAAATAGGGCAGAGTTT
CGTGAGGGCCAACCTGGGCCGCGGCCCGCCAAAGCAAGCCTTCTTGGAGCAGAAGAATAATAACTTTTCCTAGGCCCAAG
CCCACACCTGTCACAGCGTTCCACGAGATAGCAGCCCAGCGCCCAACGCCCAGGAGCTCACAAGTCACAACCCTCGCAGC
GCTCAGCACACCGCAGCCGCCGGCCGGCCGCCGCCCCACGGGTGACCGTCA-----CGCCGCCGCCG-CCGCCCACCGTC
CACCGGCGCACACCAGCCGCAGCCCACGACCACCCCTATCGATTCGGAGACCCGCTCGCCTCCCCGTCA----CCATCCA
CGCCTTCCCCCTCCCACCTCCCCCGCCAAGCCAAAGCCGCCGCCACCCTTCCCTTCCCCGGCTTCCCTCCAAAACCCTAG
CGAAAAATTCCCCATTCCCTCCACGAAAGATTCAAACCCTGCCCCCAATTTTCAATCCTCCTCCCGCCGGACCCGATCCC
ACTCCCACCTACCCTCCCGAGAAAACTACCCATTAAAATCCCTCCCGGATGCGCTCCATTTCTTCCGCCATGAGGTCGCT
CCTCCTCTCCG---CCTCCGCCCCCTCCTCCTCCCCCGCTTTCTTGCCCCGCTCCACCGCCCTCCGCCCGCTGCTCTCGC
TCCCTTTCCGGCCGGATCTTTCCCGCCCCAGGCCCTTCGCCCCCCCGGCCAGGTCGCTCTCTAAGACGGCAC--------
-CGCCGGCGGCGGCGGCCAGGGCTCGGATAGACGAACGTGTTTCGGGGATGGAGGTCCAGGCGGCGAATTCCGGCGAGAT
TCACATCATCGTCGGGCCCATGTTCGCTGGCAAGACCACCGCGCTTCTCCGCCGGGTCCAGGCCGAGGCCGGCACCGGCA
GGTACTGACCCCCGTCCAGTCTCCTCTCTCTCTTGTTT---------------ACTGCCAGTGAACCCCGGTTCCTATCA
GTCAGTCAGGGTTTCTGATAAGACCAAAGAAAAATCAATGCTCAGAAGAGTAGGAGCCA---------------------
-------------------------------------------------------------------AGTAGTATATAAT
ACTGATGTCCTTCTTATAAC--TCTAATTGTCAATAGCTTGCATAGAAAACTGGTGGCCTGTCAGAGGTTCGCTGGTCGG
TGATGGAGTAATTCATGATCTTGTCTAAGTATATAATAACTAATCTTCTTCTTA----TATAACTCTAATTGTCAATACC
TTGCATAGAAAACTGGTGGCCTGTCAGAGTTTCACTGGTCAGTGATGGCATAATCAATGATCTTAGCACACTCAAACTGA
TATTTACTTTCTTTCTTAAAAAGACTGCTATGTTACGAGTGATTTTCTTAGTCAGCAAGAAGATTGCTATTGCAGAGATT
TTGATGAAAAC-AATGTGTCTTGCTCTTTCTGTCTCCTGAATTCCACGCTTTTTGACTTCGCCATTTACTTCCATATGTG
GGACAAATCGTTGTGGTAGAATTTTGACATCTTTGCTCCTTGCAATACAGGACTGTGGCACTCATAAAGTCTGACAAAGA
CAATCGATATGGATTGGATTCTGTTGTGACCCATGATGGCACAAAGATGGCATGCTGGGCTCTACCAGAGCTTTCAACTT
TCCAAGATAAATTAGGGAGAGATGCTTATGATAAGGTGTGACAAGCACTTTCAGCTTTCTATTTAGTTAATCATGCTGTG
CACTGTGAATTACTACTGCCTTTCAAATATTCTAATGGTTTCAATGGATGCTTCAAACATCACTCTGCTTTTGTTTGGTA
GTCTTATTTCTCGTTGCAATATATCGTTTCTCCATTTTATGCTGTATTGCTTCAGATTCTTTTTGCAAAAATGTACACAA
AAATTATACCTTTACAGTGCTTTCTCACAACAAGGTAGAAAAGAGAGCAATCTAGACTGTTGCTATATGTGCTTGTGCTA
GCAGTGAATTCATAAAAGTAAATGTGCCATCAAGCATTATTTGAAAAGGAGATCTGTATGTATATGCAAAATGCTATCAT
TTGGGCCTGCATAGATGGAAAAGTTTAATACTGGAGTGGTAGTTGTATGATCTTGGGC-GCGTTTGGTTGGATGCCACAA
TATTGCACAGTTAAGTTAGCCAGC-----------TATGTTAATGTCTAGTTCTTCTCTGAACTTATCATGTTTCACCTC
GTTTGACCTATAACCCATATTTCAAGGTCACATTATTTTGTCACATTGAGGAAGCTGAATCCACCCAGTCTGTGGCTACA
AAAAATTGCTTTTGGTCTTGGCCTGAAATAGTAGTACTGCTCCTGTTTTCCATTTAGCTGAGGTTTGTGAATAAAGAAGT
GAAAATTGAATAATTGTGGCAAGGTAGCTGACTGGAAAACTTACTGAGTCCAATCAAAACATGTTATGGTTGACTTTTT-
---------GTAGCCATTTGTTTTTCAATAATATATTTGCAAGCCTGTAGAAATTGCCAAATGTACTTGTGTTAATTTGA
ACAGTGTATGCCTAAGAAGCCATTATTTATCTAACAACAAAAAGTTTGATCTACAAGCATCCTGTGTTGAAAATTGACGA
GCTTGTAATTAGAGGACCTAGTTTTGTCACATGATAGCAGGAGGCAGTT-GTCATGCTTAGTGTTCATCTACTTGCCTGA
TTTAGTAAGTAGATTGTCAATGATATGGGTTG--ACTAGCTAATCTGTTCTTCAGCCATTCTTAAAAAATACATGTTTG-
--------------------------------------------------------------------------------
TGTGCGAACTTCCTTTTATCTGGTTATCATCACAACTTATCGTACAGTTGCTATGTGAGATGGTACCACCTCCTATCTGT
ACCGTTGCTGTGGGAAATGGCCTGGAAGCTTTAGCCAGCCAACAATGGTTGAGATAAGAGCTGTTGGTTTTTTCATGTCA
TGGTGTGGCATGGTGGTATTGAAGCTGTTGGTTTTGGTTGTCTGTAAGAATCTCATCAAAATTTGCTGCTACAGGTAGAT
GTCATAGGTATCGATGAAGCCCAGTTCTTCGATGATCTTCATGATTTTTGCAGCAAAGCCGCTGATCATGATGGAAAAAT
CGTTGTGGTTGCAGGGCTAGATGGTGATTACAAAAGGTACTTGCTGACTGATTTATCTCAT--AACTTGTTTAGTTTCCC
TATGATGTGGCCATTTGCTGAATCTCTGTACATCTCCTAAAAGAC--TTAAATAAATAAAATCATCCAAATGGTCCAAGT
TTCATTCAGAAGGTATTGCAATTCTTTTTTTTTATCATGCCTACTGTTTGATGGTCGAGTTGTTTCACAGGAACAAGTTT
GGCTCAGTACTGGACATCATTCCCCTGGCCAACTCGGTCACCAAGCTGACAGCACGGTGTGAGTTGTGCGATCGCCGGGC
GTCCTTCACATTGAGGAAGACACAGGAAACCAGGACCGAACTCATTGGTGGAGCCAATGTGTATATGCCTGTGTGCAGGC
AGCACTACTTGGACGGGCAGATTGTCATCGAGGCCACAAGGATTGTTATGGATATCGAAAGATCCACGGAAGTAGCTCGC
TGCTAGTTAGGGGTGT--GTGCCTTATCCAGAATATCCCTCTCTTCAGTAC--------TCCAACAGCGTGTTGAGATGT
GCTACCAGTGTGTACCTGTTATTGATCATCTGTGGCAGCATGCCAGCCTGAATTTCAAGTTATGAGGCAATGCCATATTA
CCATAGGAGAACTTAATTAAGTTGCAATTTGAGCAGATTGTAAATATTTACCAGTTGGGGATGTTGGTGCAAACATCTCT
TCTTTTTAGAATACCCACCTTTTAATTCGAAAATGATGACCTCTTGTGCCAAAATTGCGCACGCATGAGACAGATTCTGG
AAGGGAGGTGAATGCGTAGTAATATGTGGTTGTTTG-TAAGAAACATTGGTTAGCACGAAATTGTTAGTCCCTGTATTAG
GTAGAATGAGAAACTGAAGAGGTAACAAATGGTTATCTATTTATTTCTGGACATGTCTTATACAC---TGTAATTTGGAT
GCTCCAGTTCGGAAATATTGTGTGTGCAAAAAAAATATTTTGGTCACTCAT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>SNPs
SS--SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------S-----------
------S--------S-------S---------------S-------------------------------------S--
--------SSSSSS------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S---S--------SSS----------S----S
---S---------------SS-SS-SSS------------------S-----------------SS-S------------
--------------------------------------------------------------------------------
-----------------------------S-------S------------SSSSSSSSSSSSS-----------------
------------------------------S--------------------------------------S----------
----SS---------------------------------------------------------SS-S-------------
---------------------------------------------------SSSSS----S----------S-S------
-------------------------------S-----------SS-S----------------S-------------S--
----------S---------------S----------------------S------------------------------
-S------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
----------------------------S---------------------------------------------------
---------------------------------------S---S--------------------------S---SS----
-------------------S---S----------------S---------------------------------------
------------------------------------------------------S-------------------------
------------SSS-SSSSSSSS---------------------------------------------S----------
-S------------------------------------------S---------S-------------------------
--------------------------------------------------------------------------------
--------S---------------------------S----------------------------------S--------
--------------------------------------------------------------------------------
-------------------S--------------------S-----------S----S----------------------
------S-----------------------S--SS---------------------------------------------
------S----S-----------S--------------------S-----------------------------------
--------S--S--------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
-------------------------------S----SS------------------------------------------
--------------------S---S---S-------------S-----------------------S-------------
------------S----------------------------------S--------------------------------
--------------------------S----S----------------------------S-------------------
--------------S------------------------------S------------SS--------------------
------------------------------------------------S-------------------------------
------------------------------SS------S-----------------------------------------
--------S-----S----------------S----S-------------------------------------------
---------------------------S-------------------S--------------------------------
-------------------------------------------------S------------------------------
-------------------------------------------S---------S--------S-----------------
-------------------S-----------------------------S-----------S-----------S------
--------------------------------SS--------------------------------S-----SSSS-SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
--------------------------------------------------------------------------------
--S------S--------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S-------------------------------------------------------SS---------------------
--------------------------------------------------S-----------------------------
----------------------------------------------------------------S---------------
--------S-----------------------------------------------------------------------
----------S---------------------------------------------------------------------
--------S-------------------------------------S---------------------------------
-------------------------SS--------------------------S--------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
------------------------S-------------------------------------------------------
-S------SSSSSSS----------------S----S------------S------------------------------
-------------------------------------------------------S------SSSSSS------------
---------------------------------------------S---S--------------S---S----S------
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_144
--------------------------------------------------------------------------------
--------------------------------------------TGTGCTGACGTGGGTTGTAT----------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_2037
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TCTTGCATAGAAAACTGGTGGC----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>forward_1780
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GGTACTCACCCCGTCCATTC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_3742
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GACGGAGGGAGTACCTGTC
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>forward_1783
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---ACTCACCCCGTCCATTCTCT---------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_3743
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------ACGGAGGGAGTACCTGTC
TG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>forward_3685
--------------------------------------------------------------------------------
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-----------------------------------------------------------------AGAATACTCCCTCCG
TCCCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_5246
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------GGGCCTGATGTGCAGAGAAT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
