>input_sequence_24963
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-------------------------------------------------ATGGTCACGCCCCTCGACCTCGTCATCGCCC
TCGCCGCGCTGCTCCTCTCCGCCGCCGCGCCCGCGCCCGCGCTGGCTCACACCCGTGAGTACTACTTGCCACCGTCTTCT
CTTTTCCCCCCTTCACTCCTCTATAGACAGATCCATGCCTTCTTCCCCAGCAGTGTGTTCCTGCCTTGCTTGCTCCTTGC
GAGAACCTCGCGCGTGACCAGTTCGAAGTCAAAATA-TTTTCCTCAATCTCGTCTGCAAGGTCCGATTGATACTCCGGTG
GTCAATGCCATCTGAAAGAGCAGTAGATTTATCATAATCTAGCGCCCATCTGAAAGAGCAGTAAATTTGTCATATGCCAT
CTTTTCTTTGCCAAGGGCGCACACAAATCAGAAGATAGACAAC----TAAATTTGTCTCCCGGCTTCGCCAAAACATGTG
ATTTTGCTCCACCAAGGCCGGCACAAAAACAACAAATCTGCGGCACCTCGTCCCCCCTCTCTGATATATATACTGGTGCT
GGTGTGGGCGTGGCCGTCGACAACTATCAAGCCTCACTGGATAGATCCATAAAATATATTATTCCCTAATGGTTTACTCT
ATTGCTACATCTGGCACAAAACCTGCGCTCTAGATTATGCTCCTGTCAGAAACCGATCATATGTAGTACCTGAAATGGCT
CCACTCTTTCTGGTTGGCAAGCCAGCCACAACCCATTTTGGGCAGATGAGTTGGCCAGACCTTGCAAAAAAGAGAGATTT
GGTAGTAATAGGATTTCAGACTTGCATGCATCCACATGTATAACTGTTTTAAGAGGCTCTAGATAGACTCCGTTGCCAAT
CCAATCATATTTCCC---ATAAGGTTATTAATATCAATACTTTCTGTTTTCTGCAGCGTCATGTCCCGACGGTTGGCAAA
TCAGTCCTGACCGGCTAAAGTGCTTCATGCACATCTCAAGCTCACTTTCCTGGGACGGATCCGAAGCTCTCTGCCGCAAC
TTCAGCAGTCATCTGGCTGCATTATCATCGGTTCAGGAGCTAAATTTCGCAAGGTCTCTCTGTGGAGCTGCCTCCTCCGG
GTGCTGGGTTGGAGGGCGTCGCCGCAACACCAGCGGTC---TTGTTGGATGGAAATGGTCTGACAATTCGTCTTCTTGGA
ATGAGACCGCCTTTCCCGGCGAGCCGTTGCATCCCAATTGCACCGGCGCTCGCTGCAGTCTAGCCACCGGCGACGATATG
TGCACTTTGGTGACCAGTAAGCACACTGCACTTACTGGAAAGAAGTGTGCCGAGTCACATGGGCTGATTTGCATGATGAA
TCACGGTGAGTCTTTTTTTTTTTGGTAACACTGGAGTACTTTTGTTCCGTTACATGAAAATTTAGTTGCACTAACAGTCT
GACACCCACTGATTTATGCCAGAAGATAGGTGCTACCATGATCACTGCCACAAGGAGTATTTCATAGTCCTCATCGTCGT
AAGCGGCTTGATTCTCTCGACCACTCTAGCTGTTGTGGTTTGGCTGCTCGTCTACAAGCGAAGCAAGAAAAGGAAAAGAT
CGCGTGAAGCTTCCGGCGCTTCAGCTACCGCATTAGTGCCACCGCTATGGAAAGTGTTCAACAGTGAAGAACTTAGATCG
ATAACCAAGAACTTCAGTGAGGGAAACCGGCTGCCCGGAAATGCCAAGACAGGTGGTACCTACAGTGGAACCTTGCCAGA
TGGATCCAAATTAGCAATTAAGAGATTGAAGAGATCCAGCCTACAAAGGAAAAAGGATTTCTACTCCGAGATCAGTAGAG
TTGCAAAGCTCTATCATCCTAATTTAGTGGCTGTAAAAGGATGTTGTTATGATCATGGCGACCGCTTTATTGTCTATGAG
TTTGTCGCCAATGGGCCGTTGGATGTGTGGCTGCATCATATTCCCAGAGGAGGGCGGAGCCTTGATTGGGCAACGAGAAT
GAGAGTTGCCACAACCCTTGCACAGGGGATTGCGTAAGTCATCCTAACTCTTGTCTGTTCCACTCCGAGAAATGTTATTT
TTTTACTTAACTATTTGGAAAGTAATAGC---------------------------------------------------
--------------------------------------------------------------------------TGATA-
------AAGCACCTGTGGTCTAAGCTGCAATTATTTTAATCCATTCAGTTTCTTCTTTCATTATATTGATGCCTGTTTGC
TGTGTTTACCCAATTAT---GGTTGCTTGTTAAGCGGAACTTGTAGTC------CACAGATGTTTAATTCTTGGGAAAAT
GCTGGACATGCTTATGTTTATGTTAGGTTATAAATTGCGATATATAATTGCATAAGTCAGCTCTGGATTCACCGTTTTAC
TGTTGTAGGTTTCTCTGACATATTTATTAATTGGGAAAATTGCGATATATAATTGCATAAGTCAGCTCTGGACACTGA--
------------------------------------------AACATTAATTCGAGACATTTGGCTATCTTT--------
------------------AACCATATTAGTACCATTAATGATCGCATACTTACCGGTAGTCTTTTGAT-TCCAGATTTTT
GCATGACAAGGTGAAGCCCCAGGTAGTCCACCGTGATATCCGTGCAAGCAACGTCCTTCTGGACGAGGAATTTGGTTCCC
ATCTGATGGGGGTTGGGCTGTCCAAGTTTGTGCCGTGGGAAGTAATGCACGAGAGGACCGTCAAGGCGGCAACATACGGT
TACCTTGCCCCAGAGTTCATATACAGGAACGAGCTGACAACAAAGAGCGACGTCTACAGCTTCGGCGTGCTGCTTCTAGA
AATCATCAGTGGCCGTAGGCCAGCACAGTCCGTTGAATCTGCTGGATGGCAGACTATATTCGAGTGGGCGACGCCTCTGG
TCCAATCACACCGGCATCTGGAGCTGCTGGATCCGCTCATCAACGACTTGCCGGAGATAGGAGTGATCCAGAAGGTCGTG
GACCTCGTCTACGCCTGCACCCAGCATGTCCCCTCGGTGCGCCCAAGGATGTCTCACGTCGTCCATCAGCTGCAGCAGCT
TGAGCTCAAGTCAGCGGCGTCCGAGCAGCTGAGGAGCGGGACCAGCACCAGCGCGACTTCACCGATGCTGCCATTGGAGG
TCCGGACACCTCGCTGA---------------------------------------------------------------
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>chr3A_1_TraesCS3A01G078700
TTATTGATAATGCCCACCTTTGTCATATCAGTCATCTCGTAATGTGACAATCCATTTATTTTCCACAAGATTAAAAAGGT
AAATATATACCATTAATGGATATTTGAAATTTAAATTTCATACAAGCATGGCATAGCTCATAGTGATTGGATGATTTTGC
AGTATCAATACAATGTGATATTCTGGAGGCTATTTCGGATCTGGGGAGCATATGCTCCTGGATGAACAATAAATTCTAAA
TAAATAGTAAGTTTTTAAAAAAAAT-CTGTTTTTTTAGATTTCATGTTCTTTAGTTGTGTAGATTTTTATGTTAGTGTAA
CAAGCATGTTTGTGCTTGAATTTTTTTATGTGTAACGGAATAGCAGTGCTTCGTCGGTGAAACAAACAAAATTAGGTGTA
CCATTTCGTGTTTGACTTGTTTTTTTTAACAGGTCAAAATGCGTAGGTCTTTACCTAAAAGTTTGCGAGCAACATTTAGA
TGAAAAGAGACATTCCGTTGACTCGACTACGAGCCGCATATGATGGG-TTTATCAACCTCGGTATGATAGGGCGGCTCAA
TCTCAATCTCTTGGAGGCGCTCGCAGAGTTAGAGTGTGCACGCATGTGTTTAGAGTGATGAGTGTAAGTACTATGTTAAA
AAAAATATGGCCATTAATAACACATCTAATTTTTTTTCAGACTTTTGACATC---TAGAAAAATATTTTTGATGCGCGGG
AGCGTGTGCTTCCGAGCCGGTGAAAAAAATTATCTCAAAAAAAAA-CTGTGGAGTAAAAAGGGTATAGCAACAGCAACTG
GAGGCAGGCAGGCAGGGCCAGGTGAGGTGGGCAGTGGAATTAATGGCGAGCAGTCAAGACGGTGGGCCCACCCGTTCCCT
TCTCCCTCCTCTCCTTTCCCATCCATCCCAGTGAGAACAGAG---GAGAGCAGAGCAGAAAGAAACGCCGCCCCTCGGAG
GAGGGGAGACCGACCACCGGAGCAAGAAGCAAGGAGGGAGGGGGCGGCCATGGTCACGCCCCTCGACCTCGTCATCGCCC
TCGCCGCGCTGCTCCTCTCCGCCGCCGCGCCCGCGCCCGCGCTGGCTCACACCCGTGAGTACTACTTGCCACCGTCTTCT
CTTTTCCCCCCTTCACTCCTCTATAGACAGATCCATGCCTTCTTCCCCAGCAGTGTGTTCCTGCCTTGCTTGCTCCTTGC
GAGAACCTCGCGCGTGACCAGTTCGAAGTCAAAATA-TTTTCCTCAATCTCGTCTGCAAGGTCCGATTGATACTCCGGTG
GTCAATGCCATCTGAAAGAGCAGTAGATTTATCATAATCTAGCGCCCATCTGAAAGAGCAGTAAATTTGTCATATGCCAT
CTTTTCTTTGCCAAGGGCGCACACAAATCAGAAGATAGACAAC----TAAATTTGTCTCCCGGCTTCGCCAAAACATGTG
ATTTTGCTCCACCAAGGCCGGCACAAAAACAACAAATCTGCGGCACCTCGTCCCCCCTCTCTGATATATATACTGGTGCT
GGTGTGGGCGTGGCCGTCGACAACTATCAAGCCTCACTGGATAGATCCATAAAATATATTATTCCCTAATGGTTTACTCT
ATTGCTACATCTGGCACAAAACCTGCGCTCTAGATTATGCTCCTGTCAGAAACCGATCATATGTAGTACCTGAAATGGCT
CCACTCTTTCTGGTTGGCAAGCCAGCCACAACCCATTTTGGGCAGATGAGTTGGCCAGACCTTGCAAAAAAGAGAGATTT
GGTAGTAATAGGATTTCAGACTTGCATGCATCCACATGTATAACTGTTTTAAGAGGCTCTAGATAGACTCCGTTGCCAAT
CCAATCATATTTCCC---ATAAGGTTATTAATATCAATACTTTCTGTTTTCTGCAGCGTCATGTCCCGACGGTTGGCAAA
TCAGTCCTGACCGGCTAAAGTGCTTCATGCACATCTCAAGCTCACTTTCCTGGGACGGATCCGAAGCTCTCTGCCGCAAC
TTCAGCAGTCATCTGGCTGCATTATCATCGGTTCAGGAGCTAAATTTCGCAAGGTCTCTCTGTGGAGCTGCCTCCTCCGG
GTGCTGGGTTGGAGGGCGTCGCCGCAACACCAGCGGTC---TTGTTGGATGGAAATGGTCTGACAATTCGTCTTCTTGGA
ATGAGACCGCCTTTCCCGGCGAGCCGTTGCATCCCAATTGCACCGGCGCTCGCTGCAGTCTAGCCACCGGCGACGATATG
TGCACTTTGGTGACCAGTAAGCACACTGCACTTACTGGAAAGAAGTGTGCCGAGTCACATGGGCTGATTTGCATGATGAA
TCACGGTGAGTCTTTTTTTTTTTGGTAACACTGGAGTACTTTTGTTCCGTTACATGAAAATTTAGTTGCACTAACAGTCT
GACACCCACTGATTTATGCCAGAAGATAGGTGCTACCATGATCACTGCCACAAGGAGTATTTCATAGTCCTCATCGTCGT
AAGCGGCTTGATTCTCTCGACCACTCTAGCTGTTGTGGTTTGGCTGCTCGTCTACAAGCGAAGCAAGAAAAGGAAAAGAT
CGCGTGAAGCTTCCGGCGCTTCAGCTACCGCATTAGTGCCACCGCTATGGAAAGTGTTCAACAGTGAAGAACTTAGATCG
ATAACCAAGAACTTCAGTGAGGGAAACCGGCTGCCCGGAAATGCCAAGACAGGTGGTACCTACAGTGGAACCTTGCCAGA
TGGATCCAAATTAGCAATTAAGAGATTGAAGAGATCCAGCCTACAAAGGAAAAAGGATTTCTACTCCGAGATCAGTAGAG
TTGCAAAGCTCTATCATCCTAATTTAGTGGCTGTAAAAGGATGTTGTTATGATCATGGCGACCGCTTTATTGTCTATGAG
TTTGTCGCCAATGGGCCGTTGGATGTGTGGCTGCATCATATTCCCAGAGGAGGGCGGAGCCTTGATTGGGCAACGAGAAT
GAGAGTTGCCACAACCCTTGCACAGGGGATTGCGTAAGTCATCCTAACTCTTGTCTGTTCCACTCCGAGAAATGTTATTT
TTTTACTTAACTATTTGGAAAGTAATAGC---------------------------------------------------
--------------------------------------------------------------------------TGATA-
------AAGCACCTGTGGTCTAAGCTGCAATTATTTTAATCCATTCAGTTTCTTCTTTCATTATATTGATGCCTGTTTGC
TGTGTTTACCCAATTAT---GGTTGCTTGTTAAGCGGAACTTGTAGTC------CACAGATGTTTAATTCTTGGGAAAAT
GCTGGACATGCTTATGTTTATGTTAGGTTATAAATTGCGATATATAATTGCATAAGTCAGCTCTGGATTCACCGTTTTAC
TGTTGTAGGTTTCTCTGACATATTTATTAATTGGGAAAATTGCGATATATAATTGCATAAGTCAGCTCTGGACACTGA--
------------------------------------------AACATTAATTCGAGACATTTGGCTATCTTT--------
------------------AACCATATTAGTACCATTAATGATCGCATACTTACCGGTAGTCTTTTGAT-TCCAGATTTTT
GCATGACAAGGTGAAGCCCCAGGTAGTCCACCGTGATATCCGTGCAAGCAACGTCCTTCTGGACGAGGAATTTGGTTCCC
ATCTGATGGGGGTTGGGCTGTCCAAGTTTGTGCCGTGGGAAGTAATGCACGAGAGGACCGTCAAGGCGGCAACATACGGT
TACCTTGCCCCAGAGTTCATATACAGGAACGAGCTGACAACAAAGAGCGACGTCTACAGCTTCGGCGTGCTGCTTCTAGA
AATCATCAGTGGCCGTAGGCCAGCACAGTCCGTTGAATCTGCTGGATGGCAGACTATATTCGAGTGGGCGACGCCTCTGG
TCCAATCACACCGGCATCTGGAGCTGCTGGATCCGCTCATCAACGACTTGCCGGAGATAGGAGTGATCCAGAAGGTCGTG
GACCTCGTCTACGCCTGCACCCAGCATGTCCCCTCGGTGCGCCCAAGGATGTCTCACGTCGTCCATCAGCTGCAGCAGCT
TGAGCTCAAGTCAGCGGCGTCCGAGCAGCTGAGGAGCGGGACCAGCACCAGCGCGACTTCACCGATGCTGCCATTGGAGG
TCCGGACACCTCGCTGAAACCATCGGTCTAGAAACACCGC-----TGTTCTTCTCATCATCAGCCATTAGGTAGCGCATT
TCTTGCAGCGTGGAGTGACCCAAGAGCCTCCTGTAACCGTAAGCGCAACGACTTTCTTGTGGGCAAGTACTTAGGGAGAG
T-AGGGTCCTGGAGGTCTAAA-CCCCCGTTCTTGCCATCGTTGTCGAGGGCTATTTGTACCCCAGCTGATTTCTACCTTA
GATCTCAACATGTCTGAGTTTAGCAAGCAACATGAATTGTTCAATGTCGGTACTCGGTACAAGCTGTTTGTCTGTATGTT
ATCTGAATGTTGATGTCAGTGGTTCGTGGTATATCCTTTCTCAACTTATCGCTGAGCTTCGTATTTACAATTGAGAAC--
--AAGACATGTTGAGAGTACCATTCCAGGGTTGCACTAGAAGATGCACACTCATGAACTATAAATAGACATGTCTGAGTT
TAGCGAGCAACGTTCAGTGTCTACTCTCTAGGAGCTGCTGGTCTATGTATTATCTGAATGTTGTTTGATCTCGGTAGTTT
TGTGATATAACACATTGTCGAGCTTCATATTTACACTTGAGAACAAAAATGTGTTGAGATCTTTGCACTAGATGTGCTCA
TGAAGTAACTAGTGAAGTAGAAGGTTCTTAATTAATCTGCACAGCAGAGTCAACTGGAGCTAAGGA--ACAGGCTTTCGC
CGTACCCTGTTGAAGGTAGGTTTCAGTGGCTGGCTAACGCTGGGCTCAAACGGCAGCAACGGCTTCTTCCCCTGTGTGCT
ACTGACACCACTGCGGCCGGACGCCATCGCAGCGCCGGCGCCGGCTGCCTTGCTGGCCCTCTGCTTCTTGGCCTTGGGGG
CCTCCAGCCGCTCCAGGATCCTTGAGGTCTTCTCGTCCAGTGGCTTCACCGGAGAGGGAAGCATGGATACCGGAGGCCTG
GGGAATTGGGCCCTGGAAGAGGAGACCGGGGTGCAGAAGTCGTCGTTGTCGTCGATGATGATGAGCTTCT
>chr3B_1
TTATTGATAATGCCCACCTTTGTCATATCAGTCATCTCGTAATGTGACAATCCATTTATTTTCCACAAGATAAAAAAGGT
AAATATATACCATTAATGGATATTTGAAATTTATATTTCATACAAGCATGGCATAGCTCATAGTGATTGGATGATTTTGC
AATATCAATACAATGTGATATTCTGGAGTCTATTTCGGATCTAGGGAGCATATGCTCCTGGATGAACAATAAATTCTAAA
TAAATAGTAAGTTTTTTAAAAAAAAACTGTTTTTTTAGATTCCATGTTCTTTAGTTGTGTAGATTTTTATGTTAGTGTAA
CAAGCATGTTTGTGCTTGAATTTTTTTTT-TGTAACGGAATACCAGTGCTTCGTCAGTGAAACAAACAAAATTAAGAGTA
CCATTTCGTGTTCGACTTGTTTCTTTTAACAGGTCAAAATGCTTAAGTCTTTCCCTAAATGTTTGCGAGCAACATTTACA
TGGAAAGAGACATCCGGTCGACTCGACTACGAGCCGCATATGATGACTTTTATCAATCTCAGTATGATAGGGCGGCTCAA
TCTC------TTGGAGGCGTTCACAGAGTTAGAGTGTGCATGTATGTGTTCAGAGTGATGAGTGTAAGTATTATATTAAA
AAATATATGGCCAT---TAACACATATAATTTTTTTTCAGACATTTGACATCTTGTAGAAAAATATTTTTGATGCGCGGG
AGCGTGTGCTTCCGAGCCGGTGAAAAAAATTATCTCAAAAGAAAAACTGTGGAGTAAAAAGGGTATAGCAACAGCGACTG
GAGGCAGGCAG---GGGCCAGGTGAGGTGGGCAGTGGAATTAATGGCGAGTAGTCAAGACGGTGGGCCCACCCGTTCCCT
TCTTCCTCTCCTCCTTTCCCATCCATCCCAGTGCGAACTCCCAGTGAGAACAAAGCAGAAAGAAACGCCGCCCCTCGGAG
GACGGGAGACCGACCACCGGAGCAAG--------------GGGGCGGCCATGGCCATGCC------CCTCGCCCTCGTCC
TCGCCGCGTTGCTCCTCTCCGCCGCCGCGCCCGCGC------TGGCTCACACCCGTGAGTA-TAC-TGCCACCGTCTTCT
CTTTCACCCCCTTCACTC-----TAGATAGATCCATGACCTCTTCCCTAGGAGTGTGTTCCTGCCTTGCTTGTTCCTCGC
GAGAGCCGAGCGCCTGACCAGCTCGGAGTCGAGCTATTTTTCCTCACTCTCGTCTGCAAGGTCTGATTGATAAT------
--------------------------------------------------------AAT------TTTGTCATATGT-AT
CTTTTCTTTGCAAAGGGCGCACACAAATCAGAAGATAAATACTTAAATAAATTTGTCTCCCGGCTTCGCCAAAACATGTG
ATTTTGCTTCACCAAGGCCGGCACAAAAACAGCAAATCTGCGGCACCTCGTTCCCCCTATCTGATATATATACTGGTGGC
TGGTGCTGGTGTGCC----ACAACTATCAAGCGTCAGCGGCTAGATCCGTATAATATAATATTCCCTAATGGTTTACTCT
AGTGCTGCATCTGGCACAAAACGTGCGCTCTAGATTATGCTCCTGTCAGAAACCGATCATATG---TACTTGAAATGGCT
CGACTCTTTCTGGTTGGCAAGCCAGCCACAGCCCATTTTGGGCAGATGAGTTGGCCATACCTTGCAAAGAAAGACAGAAA
TTG-GCAATAGGACATCAGGCATGTATGCATCCACATGTATAACTGTTTTAAGAGGCTCTAGAT----GCCATTGCCAAT
CCAATGATATTTCCC---ATAAGGTTATTAATCTCAATACTTTCTGTTTTCTGCAGCGTCATGCCCTGACGGTTGGCAAA
TCAGTCCTGACCGGCTAAAATGCTTCATGCACATCTCAAGCTCCCTTTCCTGGGACGGATCCGAAGCTCTCTGCCGCAAC
TTCAGCGGTCATCTGGCTGCATTATCATCAGTTCAGGAGCTGAATTTCGCAAGGTCTCTCTGTGGAGCTGCCTCCTCCGG
GTGCTGGGTTGGAGGGCGTCGCCACAACACCACTGGTAGTGTTGGTGGCTGGAAATGGTCTGATAATTCGTCTTCTTGGA
ACGAGACCGCCTTTCCCGGTGAGCCGTTGCATCCCAATTGCACCGGTGCTCGCTGCGGTCTAGCCGCCAGTGACGATATG
TGCACTTTGGTGACCAGTAAGCACACTGCACTTACCGGAAAGAAGTGTGCTGAGTCACATGGGCTGATTTGCATGATGAA
TCACGGTGAGTC-----TTTTCTGGTAACACTGAAGTACTTTTGTTTCGTTGCATGAAAATTTGGTTGCACTAACAGTCT
GACACCCACTGATTTACACCAGAAGATAGATGCTACCATGATCACTGCCACAAGGAGTATTTCATAGTCCTCATCGTCGT
AAGTGGCTTGATTCTCTCAACCACTCTGGCTGTTGTGGTTTGGCTGCTCGTCTACAAGCGAAGCAAGAAAAGGAAAAGAT
CACGTGAAGCTTCCGGCGCTTCAGCTACCGCGTTAGTGCCACCGCTATGGAAAGTGTTCAACAGTGAAGAGCTTAGATCG
ATAACCAAGAACTTCAGTGAGGGAAACCGGCTGCCCGGGAATGCCAAGACGGGTGGTACCTACAGTGGAACCTTGCCAGA
TGGATCCAAATTAGCAATTAAGAGATTGAAGAGATCCAGCCTACAGAGGAAAAAGGATTTCTACTCTGAGATCAGTAGAG
TTGCAAAGCTCTATCATCCTAATTTAGTGGCTGTCAAAGGATGTTGTTATGATCATGGCGACCGCTTTATTGTCTACGAG
TTTGTTGCCAATGGGCCGTTAGATGTGTGGCTGCATCATATTCCCAGAGGAGGGCGGAGCCTTGATTGGGCAACGAGAAT
GAGAGTTGCCACAACTCTTGCACAGGGGATTGCGTAAGTCATCCTAACTCTTGTCTCTTCCACTCTGAGAAATCTT-TTT
TTTTACTTATCTATTTGGAAAGTAATACTCCCTCCGTCCGAAAATACTTGTCATCAAAATGGATAAAAAGAGATGTATCT
AGAACTAAAATACATCTAGATACATCCCCTTTTATCTAGTTTGATGACAAGTATTTCCGGACGGAGGGAGTAGTTGATA-
------AAGCACCTGTGGTCTAAGCTGCAATTATTTTAATCCATTCAGTTTCTTCTTTCATAATATTGATGCCTGTTTGC
TGTGTTTACCCAATTATTATGGTTGCTCGTTAAGTGGAACTTGTAGTA------TACAGACGTTTAATTCTTGGGAAAAT
GCTGGACATGCTTATGTTTATGTTAGGTTATAAATTATG--ATATAATTGCATAAGTCAGCTCTGGGTTCACCGTTTTAC
TGTTGTAGGTTT-----------------------------ATAGAATGATTGCTGCAGCCTTGTATAATTTACAAGCAA
TATTAATTCTCACATGTCGTTTGTGTTCTATTGAAACACG-TAACATTAATT-----CATTTGGCTGTCTTTGTCCCCAC
AGCCTTACATTTAATCACAACCATATTAGA-------------GCATACTTACCGGTGGTCTTTTGAT-TCCAGATTTCT
GCATGACAAGGTGAAGCCCCAGGTAGTCCACCGTGATATCCGTGCGAGCAACGTCCTTCTCGACGAGGAATTTGGTTCCC
ATCTGATGGGGGTTGGGCTGTCCAAGTTTGTGCCATGGGAAGTAATGCACGAGAGGACCGTCAAGGCGGCAACATACGGA
TACCTCGCCCCCGAGTTCATTTACAGGAACGAGCTGACAACAAAGAGTGACGTCTACAGCTTCGGCGTGCTGCTTCTAGA
AATCATCAGTGGCCGTAGGCCAGCGCAGTCCGTTGAATCCGCAGGATGGCAGACTATATTTGAATGGGCAACGCCTCTGG
TTCAATCACACCGGCATCTGGAGCTGCTGGACCCGCTCATCAACGACTTGCCGGAGATAGGAGTGATCCAGAAGGTCGTG
GACCTCGTCTATGCCTGCACCCAGCACGTCCCCTCGGTGCGGCCAAGGATGTCTCACGTCGTCCATCAGCTGCAGCAGCT
TGAGCTCAAGTCAGCGGCGTCTGAGCAGCTGAGGAGCGGGACCAGCACCAGCGCTACTTCACCGATGCTGCCATTGGAGG
TCCGGACACCTCGCTGAAACCATCGGTCTAGAAACACCGC-----TGTTCTTCTCATCATCAGCCATTAGGTAGCGCATT
TCTTGAAGCGTGGAGTGACCCAAGACCCCCCTGTAACCGTAAGCGCAACGACTTTCTTGTGGGCAAGTACTTAGGGAGAG
TGAGGGTACTGGATGTCTAAA-CCCTCGTTCTTGCCATCGTCGTCGATGGCCATTTGTACCCCAGCTGATTTCTACCTTA
GATCTCAACATGTCTGAGTTTAGCAAGCAACATGAATTGTTCAGTGTC--TACCCAGTAGAAGCTGTTCATCTATGTATT
TTCTGCGTGTTAATGCCAGTGTCTCATGATATATCATTTATCAACTTATCGTCGAGCTTCATATTAACAAT--TTGAGAA
CGAAAACATGTTGAGAATATCATTCTAGGGCTACACTGGATGAA------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CTCA
TGAAGTAACTAGTGAAGTAGAAGGCTCTTGATTAATCTGCAGAGCAGAGTGAACTGGAGGTCTAAGAGACGGGCTTTCGC
CGTACCCTGTTGAAGGTAGGTTTCAGCGGCTGGCTAGCGCTGGGCTCAAACGGCAGCAGCGGCTTCTTGGCCTGCGTGCT
ACTGACACCACCGCGGCCGGACGCCGTCGCAGCGCCCGCC------GCCTTGCTGGCCCTCTGCTTCTTGGCCTTGGGGG
CCTCCAGCCGCTCCAGGATCCTGGAGGTCTTCTCGTCCAGTGGCTTCACCGGAGACGGCAGCGTGGAGACCGGAGGCCTG
GGGAATGTGGCCCTGGAAGAGGAGACCGGGGTGCAGAAGTCGTCGTTGTCGTCGATGATGATGAGCTTCT
>chr3D_797
GGCGG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------CAGCCAGGGCCAGGTGTGGTAGGCAGTGGAATTAATGGCGAGCAGTCAAGACGGTGGGCCCACCCGTTCCCT
TCTCCCTCCTCTCCTTTCCCATCCATCCCAGTGAGAAC--------AGAGCAGAGCAGAAAGAAACGCCGCCCCTCGGAG
GAGGGGAGACCGACCACCGGAGCAAGAAGCAAGG---GAGGGCCCGGCCATGGCCCTCCC------CCTCGCCCTCCCCC
TCGCCGCGCTGCTCCTCTCCGCCGCCGCGCCCGCGC------TGGCTCATACCCGTGAGTATTAC-TGCCACCGTCTTCT
CTTTTCCCCC-TTCACTCCTCTCTAGACAGATCCATGCCTTCTTCCCCAGGAGTGTGCTCCTGCCTTGCTTATTCCTCGC
GAGAACCTCGCGCGTGGCCAGTTCGGAGTCGAGCTGTTTTTCCTG----TCATCTGCAAGGTCTGATTGATAGT------
--------------------------------------------------------AGTAATAAATTTGCCATATGCCGT
CTTTTCTTTGCAAAGGGCGCACACGAATCAGAAGATAAATAG-TAAATAAATTTGTCTCCCGGCTTCGCCAAAACATGTG
ATTTTGCTTCGCCAAGGCCGGCACAAAAACAGCAAATCTGCGGCACCTCGTCCCCCCTATCTGATATATATACTGGTGCT
GGTGTGGGCGTGGCCGTCGACAACTATCAAGCGTCACTAACTAGATCCACATAATATATTATTTCCTAATGGTTTACTCT
AGTGCTGCTTCTGGCACAAAACCTGCACTCTAGATTATGCTCCTGTCAG-AACCGCTCTGATG---TACCTGAAATGGCT
CGACTCTTTCTGGG--------CAGCCACAGCCCATTTTGGGCAGATGAGTTGGTCATACCTTGCAAAGAAAGACAGAGA
TTG-GTAATAGGATTTCGGACTTGTATGCAACCACATGTATAACTGTTTCAAGAAGCTCTAGAT----TCCGTTGTCAAT
CCAATCATATTTCCCATAATAAGGTTATTAATATCAATACTTTCTGTTTTCTGCAGCGTCATGCCCCGACGGTTGGCAAA
TCAGTCCTGATCGGGCCAAATGCTTCATGCACATCTCAACATCCCTTTCCTGGGACGGATCCGAAGCCCTCTGCCGCAAC
TTCAGCGGTCATCTGGCTGCATTATCATCAGTTCAGGAGCTGAATTTCGCGAGGTCTCTCTGTGGAGCTGCCTCCTCCGG
GTGCTGGGTTGGAGGGCGTCGCCGCAACACCAGTAGTGGTGTTGTTGGCTGGAAATGGTCTGACAATTCGTCTTCTTGGA
ACGGGACCGCATTTCCCGGTGAGCCGTTGCGTCCCAATTGCACCGGTGCTCGCTGCGGTCTAGCCACCGGCGACGATATG
TGCACTTTGGTGACCAGTAAGCACACTGCACTTACCGGAAAGAAGTGTGCCGAGTCACATGGGCTGATTTGCATGATGAA
TCACGGTGAGTCTTC----TTTTGGTAACACTGAAGTACTTTTGTTCCGTTGCATGAAAATTTAGTTGCACTAACAGTCT
GACACCCACTGATTTATGCCAGAAGATAGGTGCTACCATGATCACTGCCACAAGGAGTATTTCATAGTCCTCATCGTCGT
AAGCGGCTTGATTCTCTCGACCACGCTAGCTGTTGTGGTTTGGCTGCTCGTCTACAAGCGAAGCAAGAAAAGGAAAAGAT
CACGTGAAGCTTCCGGCGCTTCAGCTACCGCATTAGTGCCACCGCTGTGGAAAGTGTTCAACAGTGAAGAGCTTAGATCG
ATAACCAAGAACTTCAGTGAGGGAAACCGGCTGCCTGGAAATGCCAAGACAGGTGGTACCTACAGTGGAACCTTGCCAGA
TGGATCCAAACTAGCAATTAAGAGATTGAAGAGATCCAGCCTACAAAGGAAAAAGGATTTCTACTCTGAGATCAGTAGAG
TCGCAAAGCTCTATCATCCTAACTTGGTGGCTGTAAAAGGATGTTGTTATGATCATGGCGACCGCTTTATTGTCTATGAG
TTTGTCGCCAATGGTCCGTTGGATGTGTGGCTGCATCATATTCCCAGAGGAGGGCGGAGCCTTGATTGGGCAACGAGAAT
GAGAGTTGCCACAACTCTTGCACAGGGGATTGCGTAAGTCATCCTAACTCTTGTCTCTTCCACTCTGAGAAATGTT-ATT
TTTTACTTAACTGTTTGGAAAGTAATAAC---------------------------------------------------
--------------------------------------------------------------------------TGATAA
AGCATGAAGCTCCTGTGGTCTAAGCTGCAATTATTTTTATTCATTCAGTTTCTTCTTTCGTAATATTGATGCCTGTTTGC
TGTGTTTATCC---TATTATGGTTGCTCGTTAAATGGAACTTGTAGCTGTAGCCTACAGATGTTTAATTCTTTGGAAAAT
GCTGGACATGCTTA-GTTTATGTTAGGTTATGAATTATGATATATAATTGCATAAGTCAGCTCCAGATTCACCGTTGTAC
TGTTGTAGGTTTCTCTGACATATTTATTAATTTCAGACTAGATAGAATGATTGCTGCAGCCTTATAT---TTACAAGCAA
TATTAATTCTCACGTGTTGTTTGTGTTCTAATTAAACATGTTAACATTAATTTGAGACATTTGGCTGTCTTTGTCCCCAT
AATCTTACATTTAATCATGACCATATTAGTACCAATAATGATCGCATACTTACTGGTGCTCTTTTCCAATCCAGATTTTT
GCATGACAAGGTGAAGCCCCAGGTAGTCCACCGTGATATCCGTGCGAGCAACGTCCTTCTCGACGAGGAATTTGGTTCCC
ATCTGATGGGGGTCGGGCTGTCCAAGTTTGTGCCGTGGGAAGTAATGCACGAGCGGACCGTCAAGGCGGCAACATACGGA
TACCTTGCCCCCGAGTTCATTTACAGGAACGAGCTGACAACAAAGAGCGATGTCTACAGCTTCGGCGTGCTGCTTCTAGA
AATCATCAGTGGCCGTCGCCCAGCGCAGTCGGTTGAATCTGCTGGATGGCAGACAATATTCGAATGGGCGACGCCGCTGG
TCCAATCACACCGGCATCTGGAGCTGCTGGACCCGCTCATCAACGACATGCCGGAGATAGGAGTGATCCAGAAGGTCGTG
GACCTCGTCTACGCCTGCACCCAGCATGTCCCCTCGGTGCGGCCAAGGATGTCTCATGTCGTCCATCAGCTGCAGCAGCT
TGAGCTAAAGTCAGCGGCGTCTGAGCAGCTGAGGAGCGGGACCAGCACCAGCGCGACCTCTCCGATGCTGCCATTGGAGG
TCCGGACACCTCGCTGAAACCATCGGTCTAGAAACACCGCTGTGCTGTTCTTCTCATCGTCAGCCATTAGGTAGCGCATT
TCTTGCAGCGTGGAGTGACCCAAGAGCCTCCTGTAACCATAAGCGCAACGACTTTCTTGTGGGCAAGTACTTAGGGAGAG
T-AGGGTCCTGGAGGTCTAAACCCCTCGTGCTTGCCATCGTCGTCGAGGGCCATTTGTACCCCAGCTGATTTCTACCTTA
GATCTCAACATGTCTGAGTTTAGCAAGCAACATGAATTGTTCGATGTC--TACTCAGTAGATGCTGTTTATCTATGTATT
CTCTGAATGTTGATGTCAGTGGTTCGTGGCACATCCTTTCCCAACTTATTGTTGAGCTTCATAGTTACTACAATTCAGAA
CAAAAACATGTTGAGAATATCATTATAGGGCTACACTGGACGAA------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CTCA
TGAAGTAACTAGTGAAGTAGAAGGTTCTTAATTAATCTGCACAGCAGAGTCAACTGGAGCTAAGGA--ACAGGCTTTCGC
CGTACCCTGTTGAAGGTAGGCTTCAGTGGCTGGCTAGCGCTGGGCTCAAACGGCAGCAGCGGCTTCTTCCCCTGTGTGCT
ACTGACACCACCGCGGCCGGACGCCGTCGCGGCGCCGGCACTGGGCGGCTTGCTGGCCCTCTGCTTCTTGGCCTTGGGGG
CCTCCAGCCGCTCCAGGATCCTCGAGGTCTTCTCGTCCAGTGGCTTCACCGGAGACGGCAGCGTGGAGACCGGAGGCCTG
GGGAATGTGGCCCTGGAAGAGGAGACCGGAGTGCAGAAATCGTCATTGTCGTCGATGATGATGAGCTTCT
>SNPs
-----------------------------------------------------------------------S--------
---------------------------------S----------------------------------------------
-S--------------------------S-------------S-------------------------------------
----------------S-------S----------------S--------------------------------------
---------------------------S-S------------S------------S------------------S-S---
------------S---------S-------------------S--S------S------S------------------S-
--S----------S-S--S--------------------------SS---------S---S-------------------
----SSSSSS---------S--S-----------------S-S-------S-------------------S---S-----
---S----------SSS--------S----------------S-------------------------------------
----------------------------------------S----------------------------------S----
-----------S--------------------------------------------------------------------
--------------------------------------SSSS--------------------------------------
----------------------------------SSS----------------S--S---SSSSSS-----S-S------
------------------------------------SSSSSS-------------------S---S--------------
----------------------S---------------------------S---------------------S----S--
-------------------------S----S-SS------------S----------------S--------S-SSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-S-------------------
-----------S-------------------------S-S-SS-------------------------------------
--------S----------------------S--------------------------S---------------------
--------------------------------S-------S----------S----------------------------
-S----S--------------------------------------------------------SSS--------------
-S----------------------------S--------------------------S----------S--SSSSSSSSS
SSSS--------------------S---------------------------------------SSSS------------
---------------------------------------------------------------S----------------
-------------------S-----------------------S------------------------------------
------S----------------------S-----------S--------------------------------------
---------------------------------S---S----------S-------------------------------
-S-----------------S--------------------------S---------S-----------------------
-----------------------------------S--------------------------------------------
--------------SSS----------------S-----------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S--------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------S--------S----------S---
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
---------------------------S------S------------S------S-------------------------
------------------------------------SS------------------------------------------
--------------------------------SSSS-SSSSSSSSS--SSSSSSSSSSSSS-S-SS-SSSSSSSSS-S--
----------------------------------------------------S-------------S-------------
----------------------------------S----------------------S----------------------
---------------------------------------------S--------------S-------------------
-------------------------------------------------------------------------------S
-----------S--------S-----------------------------------------------------------
------------------------S--------------------------------------S----------------
-------------------------------S------------------------------------------------
-----------------------------------------S--------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S---------------S---------S----------------------------
------------------------------------------------SS-----S---S---------S---S-S-S--
S--------------------------------------------------S--------S----------SSSSS-S--
----S-----------S--S-----S----S-S----S--S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
--------------------------------------------------------------------------------
------------------------------------S---------------------S---------------------
-----------S-------------S-------------S-S--SS----------------------------------
----------------------S--------------------------------S--S---S----S------------
------SS--------------------------------------------------------------
>forward_580
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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TCTCAATCTCTTGGAGGCGC------------------------------------------------------------
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>reverse_1825
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----------------------------------------------------------------AGACTCCGTTGCCAAT
CCAA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>forward_1289
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------ATACTCCGGTG
GTCAATGCC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2276
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-----------------------------------TGGAAAGAAGTGTGCCGAGT-------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>forward_1295
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------------------CGGTG
GTCAATGCCATCTGA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2976
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---------------CCTTGCACAGGGGATTGCG----------------------------------------------
--------------------------------------------------------------------------------
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>forward_1472
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------------CAAGGCCGGCACAAAAACAA------------------------------------------------
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>reverse_3499
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----------------------------------------------------------AAGTCAGCTCTGGACACTGA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>forward_1749
--------------------------------------------------------------------------------
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-------------------------------------------------GTTGGCCAGACCTTGCAAAA-----------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_3840
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
TACCTTGCCCCAGAGTTCA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>forward_3741
--------------------------------------------------------------------------------
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-----------------------------------------GTGCAAGCAACGTCCTTCTG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_4721
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
TAGCGAGCAACGTTCAGTGT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
