>input_sequence_24873
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------------------------------------ATGGCTGCACAAGACACTCCTATGATCACCGAGGATGACTATGA
GGTACCCATCTTTTAGTTC--TTTTTTATTATAGGGCGCTGTTACTATTGAACTACCACAAGATATCTCTTGTACAATAT
TTTTCTCATGGCTACAGTATCACAATCGCATGAAATGTTTTTCATGCCCATCTGATATT-ACCAATTTTGTGTAACATTA
CTCACATATTATCAGTTAAATAGTGCTCAAAGTTCAACTTAAGCTGGCCAGCCATGGCCTATAAATATCAGCAGAGTAAG
AAAGAGAAGAGCCTGGGTTCTTGTTTTACATGTTTGCTATATGTCCGAAATTCTCTTATTTGCACCGGTTTGGACACATG
GGAGAGTTGCTATGTTGTTTACCAATGCTAGATGCACATAAGATATCTTCAAGT-ATATAGTCTTCAATTGTTAGATTAT
ACTTGAAAA-GAATTTGAGTACTCCCTCCGTCCCAAAATAATTGTCGCTGATCTAGTACAACTTTCTACTAACGTTGTAC
TAAATCGGCGACACTTATTTTGGGACTGAGGGAGCATGATA---------------------------------------
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--------TAACTGTTGGAACAGTTCATCTTATTTTATGCTGTTACTTGAAACAAGATTTTGGTGGGAATTGTATTTCTA
AATCAATTGTTTGTAAGGATCAAAATGTTCAACTCTTCTTGAGTTTTTACTGTTGTTGTGAACTATGTGCCTACATTTTT
CAGACTCAGCAGAAGAAGCAAGCTGCTGCAGATGTTCTTTTCAACTATTCACAGTTTGTTATGGTGTGCATTGGTGAGGG
AGTTCGCCCGACTGATCTCCGGTTGCACCTTATGAAGGTAGATTTGCTATCCTGTAACTTGTTGTGTTTTT-TTAATGTT
GCACATTTATTACCATCATTTTTAATGCTGGCCCTAAGCATGTGAGT------TCCTGCC-------AGAATTTCTTCTT
TGTGTACCCACAACAGTTTTTT-AGGTGCTCATGATTAATTTCCCCAAGCATAGAGAGGCCCAGGCCTTTACATACTCAA
GAGTAGATATATTATATTTTATTAGTGACATGTCTATTCTTAAGCGAAAGGAAGGAATTATTAGAGCAACAAATCTGACC
TTGAACCAGATGTG-CCAATTCGGTATCTTTCACTGATTCTTATTCCTGGAGGGCACTTTTATCTTTAGGATTTCTGGAC
CTCTGAGATCATATGTTTTATGCACCATTCGCCTACAGTGGTTTACATGAGATATTATTTCTGTCTCGCGATTCAGACAC
ACATATTTGCTAC-------------------------------------------------------------------
----------------AGTATTGTCGTGCATGGGAACCAAACATGGAACTGTTTTTAACAATTTCTGAACTTTATGCATT
TCATCTTTTGCTACGGTTTCCTATGTAGTTCAAATTGACCTGTTTCTTTACACCCTATAATGTAAATTAATGCCCTTTAG
TTAAATATCAACAAATGGATATTCGCCTTTATCATGTGATCACTCCATGGATGC-TTTTCTTCTTTTTATTTGATCATTT
ATTCTAACTTGTATAATTATTACCCTTTATCTTTGTCACTCTTGTGTTTTGAACCCTTCGGCT-TTTTCTTGAAGGGTGT
GCAACTGTTTTTTTTTCC--GAGCAACCGCC-------------------------------------------------
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-------------------------------------AGGAGCTTTGCCTTTTCAGT---AAGAGTAA-----GAGCTGG
CCAGTTAATAGGGAAAATTGGCCGGAAACCGATACATCAGTTACACACACACCAGCACTGAGATCGCGCACCAGGCGAGC
CGCTGGTTTCGCCACACGAGCAACTAGAGCCGACACCCTACAACCAGATTGGAAGCCGCCACGCTGAATCTGGCATCCAC
GCCGGTCCCAAGGCCACAACCAGACGAGTCAATGACTCAGTCGCCCAAGCAACCAGAGACGGCACCCCACAACAGCACAA
CAGTTTTTGGAGCTACTGCTCTGACTTACTAACCTAAAACACACACTGACCCCGAGGCAGAGCACTAGGCAAGCCGCCGG
CTCCGTCACTCAAGCAACTGGGGCCGACACCCCACAACCAGACCCAAAGCCGCCGCTCCAGCATCCATGCTGGCCCCGAG
CCGACACCCTAAGAAGACATCGAGATCCGGAGCCACCGCTCTGTCCTCCACATCGGGTGAGGTCGTGCACCGCCCGATTC
GATGGCTCGACCACGTCGTCCGCCACGGACGCTGACATGGCAACTCCACATGAT--AGTCTTCTCTGGCTAGGCCATGGC
CTCCTAAGGTGACGCCTCCAAGGAGGAAGTGACGAGGATGCCGCCGTCCCCTCCTCCGGCAGAAACAGGGAACTTGAACG
TTCACCTGGAGGGTTCAATACCAGAGACTTCGAGAGGTGAAATAGAGCACCCACGATGCCCCCTCCAAGGAGGGGAACGA
TGCCAGCAGGTGTCGCCATGTTCGGCGCCAACTAACTGTTCTATTCAC-----CTTGTGTTTTATGTCTTGGGATATTCA
CTCGAACAAGATAACATGTTTCTGGTGCAATTAAGATGTTAGTTAGCTGCATTCTTGCATTTGAAACTAAATTAGCAAGG
GGT-CAAATGAAAGCCTAACTATTCTGGCTTTGGCATATGGCTATGGGCCTGTTAGGGCTAGC-GTTCCAAAAGTGCACT
TTCTGATTACCCATCTCACCCAAAATAAGGAATAAGTAGTGTTCTATCTTCAAGTTGCACGTTCTACCCCTTGAACTCCA
AGCGTGTCAAAACTAAGCATCTCTACTCATTAAGTTTAAGTCTGCAGCCTAACTATTTTATGCTTGAATGCAATTTGACT
AGCAAAACACATGTCTCAGTGAGGATAGTGGCTATATAAGCACAATTGACACCAGGCAATTCATGCTTCTGTTCGCCAAC
AAACTCCGGGGTTATTTCTTCTGGCCTGAGTCCATCAGGCTGATATGATGCTAACCCAGATCTTCTGTCTCCTATTTCCC
CAGGAAATTTCAGGGATGCCCACCTCTTTGAAGGAAGAGCCACGGCAGGCAGCTGCCTCCCCAGATTCTAGCGGTGAACC
ATCATCCTCTGGGACGATGAAAGAAGACAGGAGCGAAATCCCATAA----------------------------------
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----------------------------------------------------------------------------
>chr1A_1_TraesCS1A01G223000
TATGATTAGAAGTATCTCTATTCTTCAATCTAAGGCGTCTTATTTATTTTTACTACTGTTCTTTTATGCATGTTATTGAT
ACCTGCATCTCTCCTGATCCCATCTGATGTAGAAATAAATTAGTTGGTTGGTTTCCCCATAATTTTGTGCTAATTACTCT
ACACCCGTCTAGGATTTTTATTCCCCCGTTTCAACGCACGGGCAATTAGTATTGTTATGTATTTAGAACATTTCCTCGAA
AAGTACCAACAACCAGCTGGGCCGGCCCAATAATAACGACGGGAGGGCGCCTTGAGGCGAAAACTCCTTTGTCTCGCAAC
GGCAGGCGTTACATAGCCGCTCCCCGCAAATGATAGCCCGTCTCGACCTCGTCTTCCTCGTTCCCTGGAACTCGCTCATC
TTCCTCGTTCCTATTTGAGGTCGAGCCCTCCTCCGGCCTCTCCGCCTCCTACCTGCTGATTGGGGTGTTCGATCCGGATT
CCACCTGCTCTGCTTGGTAAGCGTGCCCTTTAGCTTCGCCTCCCCCTGTAGTGAGGA-----------------------
--------------------------------------------------------------------------------
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----------------------------------------ATCGGCCCGTGGTGACCTAAATCGCCAGTGCCCCTTCCGT
CTTCCTCGCCTCCGGCACGGCTCCGCCGCCACGCGATCTATCGCTCCGGCGAGACCGGCCTTTTTCATCTGCTTCCTTAG
CTCCCTGTGGTGATTCTGAAGCTTCTGCCGCTGCCCCCCGTCGAACCGCTTTTGCTGTTAGTTGTTATTGACGAAATTTT
TATCCAGATAGTAAAAATA-------GA---TATTACATTGCTGTTTCGGGTTAT--TATGGCCTTATGGATGCTATGCA
CAAACAAAATAGTCACCGCTGCAATTGTGCAACAATATCCAAATACGTAGTACACATGGAACTGGAATTCTGTCAACCAC
TGTTTTCATTCTCTCC-AATCTAGATAAGCGTAGCTGAGGATTGGCTTAGGCACCATTCATCTGTTTCTGATATGATCTG
TACCCTACCTCAAACAGGATTAGAAGATATAAAAAAATGGCTGCACAAGACACTCCTATGATCACCGAGGATGACTATGA
GGTACCCATCTTTTAGTTC--TTTTTTATTATAGGGCGCTGTTACTATTGAACTACCACAAGATATCTCTTGTACAATAT
TTTTCTCATGGCTACAGTATCACAATCGCATGAAATGTTTTTCATGCCCATCTGATATT-ACCAATTTTGTGTAACATTA
CTCACATATTATCAGTTAAATAGTGCTCAAAGTTCAACTTAAGCTGGCCAGCCATGGCCTATAAATATCAGCAGAGTAAG
AAAGAGAAGAGCCTGGGTTCTTGTTTTACATGTTTGCTATATGTCCGAAATTCTCTTATTTGCACCGGTTTGGACACATG
GGAGAGTTGCTATGTTGTTTACCAATGCTAGATGCACATAAGATATCTTCAAGT-ATATAGTCTTCAATTGTTAGATTAT
ACTTGAAAA-GAATTTGAGTACTCCCTCCGTCCCAAAATAATTGTCGCTGATCTAGTACAACTTTCTACTAACGTTGTAC
TAAATCGGCGACACTTATTTTGGGACTGAGGGAGCATGATA---------------------------------------
--------------------------------------------------------------------------------
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--------TAACTGTTGGAACAGTTCATCTTATTTTATGCTGTTACTTGAAACAAGATTTTGGTGGGAATTGTATTTCTA
AATCAATTGTTTGTAAGGATCAAAATGTTCAACTCTTCTTGAGTTTTTACTGTTGTTGTGAACTATGTGCCTACATTTTT
CAGACTCAGCAGAAGAAGCAAGCTGCTGCAGATGTTCTTTTCAACTATTCACAGTTTGTTATGGTGTGCATTGGTGAGGG
AGTTCGCCCGACTGATCTCCGGTTGCACCTTATGAAGGTAGATTTGCTATCCTGTAACTTGTTGTGTTTTT-TTAATGTT
GCACATTTATTACCATCATTTTTAATGCTGGCCCTAAGCATGTGAGT------TCCTGCC-------AGAATTTCTTCTT
TGTGTACCCACAACAGTTTTTT-AGGTGCTCATGATTAATTTCCCCAAGCATAGAGAGGCCCAGGCCTTTACATACTCAA
GAGTAGATATATTATATTTTATTAGTGACATGTCTATTCTTAAGCGAAAGGAAGGAATTATTAGAGCAACAAATCTGACC
TTGAACCAGATGTG-CCAATTCGGTATCTTTCACTGATTCTTATTCCTGGAGGGCACTTTTATCTTTAGGATTTCTGGAC
CTCTGAGATCATATGTTTTATGCACCATTCGCCTACAGTGGTTTACATGAGATATTATTTCTGTCTCGCGATTCAGACAC
ACATATTTGCTAC-------------------------------------------------------------------
----------------AGTATTGTCGTGCATGGGAACCAAACATGGAACTGTTTTTAACAATTTCTGAACTTTATGCATT
TCATCTTTTGCTACGGTTTCCTATGTAGTTCAAATTGACCTGTTTCTTTACACCCTATAATGTAAATTAATGCCCTTTAG
TTAAATATCAACAAATGGATATTCGCCTTTATCATGTGATCACTCCATGGATGC-TTTTCTTCTTTTTATTTGATCATTT
ATTCTAACTTGTATAATTATTACCCTTTATCTTTGTCACTCTTGTGTTTTGAACCCTTCGGCT-TTTTCTTGAAGGGTGT
GCAACTGTTTTTTTTTCC--GAGCAACCGCC-------------------------------------------------
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-------------------------------------AGGAGCTTTGCCTTTTCAGT---AAGAGTAA-----GAGCTGG
CCAGTTAATAGGGAAAATTGGCCGGAAACCGATACATCAGTTACACACACACCAGCACTGAGATCGCGCACCAGGCGAGC
CGCTGGTTTCGCCACACGAGCAACTAGAGCCGACACCCTACAACCAGATTGGAAGCCGCCACGCTGAATCTGGCATCCAC
GCCGGTCCCAAGGCCACAACCAGACGAGTCAATGACTCAGTCGCCCAAGCAACCAGAGACGGCACCCCACAACAGCACAA
CAGTTTTTGGAGCTACTGCTCTGACTTACTAACCTAAAACACACACTGACCCCGAGGCAGAGCACTAGGCAAGCCGCCGG
CTCCGTCACTCAAGCAACTGGGGCCGACACCCCACAACCAGACCCAAAGCCGCCGCTCCAGCATCCATGCTGGCCCCGAG
CCGACACCCTAAGAAGACATCGAGATCCGGAGCCACCGCTCTGTCCTCCACATCGGGTGAGGTCGTGCACCGCCCGATTC
GATGGCTCGACCACGTCGTCCGCCACGGACGCTGACATGGCAACTCCACATGAT--AGTCTTCTCTGGCTAGGCCATGGC
CTCCTAAGGTGACGCCTCCAAGGAGGAAGTGACGAGGATGCCGCCGTCCCCTCCTCCGGCAGAAACAGGGAACTTGAACG
TTCACCTGGAGGGTTCAATACCAGAGACTTCGAGAGGTGAAATAGAGCACCCACGATGCCCCCTCCAAGGAGGGGAACGA
TGCCAGCAGGTGTCGCCATGTTCGGCGCCAACTAACTGTTCTATTCAC-----CTTGTGTTTTATGTCTTGGGATATTCA
CTCGAACAAGATAACATGTTTCTGGTGCAATTAAGATGTTAGTTAGCTGCATTCTTGCATTTGAAACTAAATTAGCAAGG
GGT-CAAATGAAAGCCTAACTATTCTGGCTTTGGCATATGGCTATGGGCCTGTTAGGGCTAGC-GTTCCAAAAGTGCACT
TTCTGATTACCCATCTCACCCAAAATAAGGAATAAGTAGTGTTCTATCTTCAAGTTGCACGTTCTACCCCTTGAACTCCA
AGCGTGTCAAAACTAAGCATCTCTACTCATTAAGTTTAAGTCTGCAGCCTAACTATTTTATGCTTGAATGCAATTTGACT
AGCAAAACACATGTCTCAGTGAGGATAGTGGCTATATAAGCACAATTGACACCAGGCAATTCATGCTTCTGTTCGCCAAC
AAACTCCGGGGTTATTTCTTCTGGCCTGAGTCCATCAGGCTGATATGATGCTAACCCAGATCTTCTGTCTCCTATTTCCC
CAGGAAATTTCAGGGATGCCCACCTCTTTGAAGGAAGAGCCACGGCAGGCAGCTGCCTCCCCAGATTCTAGCGGTGAACC
ATCATCCTCTGGGACGATGAAAGAAGACAGGAGCGAAATCCCATAAGCTTCATCTGCATCTTGCAAGGAGATGG-TATCT
CAGGATGATAGGCGATGATTTGTGATCATAGAGATGTAAATAAGTTAGCATGCTTGAGGCAAGGCCTGATTTGGTTTACA
GCGCTGAAGAGCACATTTTCCTGGCGGATGGTAACATTTGTGATCATTTTTCAAGCCACTTGCATTGCATCTACTCCCTC
CGTTCCGAATTACTTGTCGCAGGTATGAATGTATCTAGATGTATTTTAGTTCTAGATACATCCATTTCTACGACGAGTAA
TTTGGAACGGAGTATTAGTTGGGGTCCATATCTT------------------AGCCTATAATCGCCGAACAATACTGTTC
TGTTGTCCATGTCTTATGTTTAATCAGGTTGACTGGAGGTTCTGTTTTGCATTCCGGGGTTGGCAGGCACATTGCGGCTT
ACAT----CCCTAGGGCTTAGTTTCAAAACAGTTCATGGGTGTTGTGGAATGCATCAGGATTTCTTGCAGCTAAGTTTTA
TAATGGGCACGAAATCTGATTGTGAAGACCCTTTTTTACCTCTC----CTTTTTTTTGAGATATAAGCACCTTCCATTGG
AT---AGGGTTATTACA---------------------------------------------------------------
-------------------------------------------------------TACATAGGACACAATTGATGGAATT
TATGCAAGCGCAAGATCATATCGGTAGGCACAAAATCTTAGCAGCAGCATCAG------CA---CCGGGGGTTGGGAGAG
TGACTCCAAGATCACCCGCTCCACC-----TCTGTTAGAGAGGTCGTAGATGGAACGAGGATCTTTGACCCACT------
---GACTGAAGCTTATGAAATTCTGGAAGTTCCTCTTCGAA---------------------------------------
-------------AGTCGTTAAGATGGCCATATCGGTTGCTGCCTGATGAGAAAGCGCAGTTGGAGGATACTAGGAGGGA
CACTGCAGCAAAGTCAATCTATGCCATTGTGGTCCATGAGACA---TTTGCAAAAACACTTTCTGCAAGGGTGAAGGGGA
GACATCCCGTCCTGGTTTT----ATCAAGGTTAATGTTGATGCGGCCTACTAGTCAACAGGTGGGGAGTTCTTTCT
>chr1D_251
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----------AACCTGCTGGGCCGGCCCAATAATAGCGACGGGAGGGCGCCTTGAGGCGAAAACTCCTTTGTCTCGCAAC
GACAGGCGATACATAGCCGCTCCCCGCAAATGATAGCCCGTCTCGAGCTCGTCTTCCTCGTTCCCCACAGCTCGCTCGTC
TTCCTCATTCCTCTTTGAGGTCGAGCCCTCCTCCG---------CCTCCTACCTGCCGATTAGGGTGTTCGATCCGGATT
CCACCTGCTCTGCTTGGTAAGCGTGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCGGCCCGTGGTGACCTAAATCGCCGGTGCCCCTTGCGT
CTTCCTCGCCTCCGGCACGGCTCCGCCGCCACGCGATTTATCGCTCCGGAGAGGCCGGCCTCTTCCATCTGCTTCCATAG
CTCCCTCTGGTATTTCTGAAGTTTCGGAGGCCGGCC-----------GCTTTTGCTGCTAGTGGTTATTGGCGAAATTTT
CATCCAGATAGTATACATAGAACTAGGA---TATTACATCGCTTTTTCGGGTTAT--TATGGCCTTATGGATGCTTTGCA
TAAACAAAATAGTCACCGCTGCAATTGTGCAACAGTATCCAAATAGTAT----ACATGGAACTGGAATTCTGTCAACCAC
TGTTTTCATTCTCTCCAAATCTAGATAAGCGTAGCTGAGGGTTGGCTTAAGCACCATTCATCTGTTTCTGATGTGATCTG
TACCCTACCTCGATCAGGATTAGAAGATATAAAG-AATGGCTGCACAAGACACTCCTATGATCACCGAGGATGACTATGA
GGTACCCATCTTTTAGTTTATTTATTTATTATAGGGCGCTTTTACTATTGAACTACCACAAGATATCTCTTGTACAATAT
TTT-CTCATGGCTACAGGATCACAATCGCAGGAAATGTTTTTAATGCGCATCTGATATTTACCAATTTTGTGTAACATTA
CTCGCATATTGTCGGTTAAATAATGCTGAAAGTTCAACTTAAGCTGGCCAACCATGCCCTATAAATATCAGCAGAGTAAG
AAAGAGAAGAGCCTGGGTTCTTATTTTACATG-TTGCTATATGTCCGAAATTCTCTGATTTGCACCGGTTTGGTCTCGTG
GGAGAGTTGCTACGTTGTTTACCAATGCTAGATGCACATCAGATATCTTCAAGTAATATAGTCTTCAATTGTTAGATTAT
ACTTGAAAA-GAATTTGAGTACTCCCTCCGTCCCAAAATAAGTGTCGCTGATCTAGTACAACTTTGTACTAATGTTGTAC
TAAATCAGCGACACTTATTTTGGGACTGAAGGAGTATGATG---------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------TAACTGTTGGACCAGTTCATCTTATTTTATGCTTTTACTTG-AACAAGATTTTGGTGAGAATTGTATTTCTA
AATCAATTGTTTGTAAGGATCAAAATTTTCTACTCTTCTTGAGTTTTTGCTGTTGTTGTGAGCTATGTGCCTACGTTTTT
CAGACTCAGCAGAAGAAGCAAGCTGCTGCAGATGTTCTTTTCAACTATTCACAGTTTGTTATGGTGTGCATTGGTGAGGG
AGTTCGCCCGACTGATCTCCGGTTGCATCTTATGAAGGTAGATTTGCTATCCTGTAACTTGTTGTGTTTTTCTTAATGTT
GCACATTTATTACCATCATTTTTAATGTTGGCCCTAAGCATGTGAGTACCTGTTCCTGCC-------AGAATTTCTTCTT
TGTGTACCCACAACAGTTTTTT-AGGTGCTCATGATTAATTTCCCCAAGCATAGAGAGGCCCAGGCCTTTACATATTCAA
GAGTAGATACATTATACTTTATTAGTGACATGTCTATTCTTAAGCCAAAGGAAGGAATTATTAGAGCAACAAATTTGACC
CTGAACCAGATA-TACCAATATGGTACCTTTCACTGTTTCTTATTCCTGGAGGGCACTTTTATGTTTAGGATTTCTAGAC
CTCTGAGATAGTGAGATCATAGGTTTCTGGGCCTACAGTGGTTTACA---------------------------------
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--------------ATGGATATTCGCCTTGATCAGTTGATCACTCCATGGATGCTTTTTCTTCTTTTCATTTGATCATTT
ATTTTAACTTGCATAATTATTATCCTTTCCCTTTGTCACTCTTGAGTTTTGAACCCTTCGGCTATTTGCTTGAAGGGTGT
GCAACTGTTCTTTTTTTTTGGAGCAACCGGC-------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------AGGAGCTTTGCCTTTTCATT---AAGAAGAGTATAAGAACTGG
CCAGTTAATAGGGAAAATTGGCCGGGAACCGATACATCAGTGACACACACATCAGCACCGAGATCGCGCACCAGGCGAGC
CGCCGGCTTCACCACACGAGCAACTAGAGCCGACAC-CTACAACCAGATTCAAAGCCGCCGAGCTGACTTCGGCATCCAC
GCCGGTCCCAAGGCCACAACCAGACGAGTCGACGAATCAGTCACCCAAGCAACCAGAGGGGACACCCTACAACAGCACAA
CAGTTTTTGGAGCTACTACA----------AACCTAAGACACACGCTGACCCCGAGGCCGAGCACTAGGCGAGCCGCCGG
CTCCGTCACCCAAGCAACTGGAGCCGACACCCCACAACCAGACCCGAAGCTGGCGCGCCAGCATCCACACTGGCCCCAAG
CCAACACCCTAAGAAGACATCGAGATCCGGAGCCACCCCTCTGACCTCCACATCGGGTGAAGCCGTACACCGCCTGATTT
GATGGCTCGACCACGGCGTCCGCCATGGACGCTGGCATGGCAACTCTGCACGAT--AGTCTTATCTGGCTAGGCTC--GC
CTCCTAAGGTGATGCCTCCAAGGAGGAAGTGACGAGGACGCCGCCGTCCCCTCCTCCGACAGAAACAGGGGACTTAAACT
TTTGCCTAGAGGATTCAATACCACAGGCTTCGAGAGATAAAATAGAGCACCCACGATGCCCCCTCCAAGGAGGGGAACGA
TGCCCGCAGGTGTCGCCATCGTCGGCCCCAGCCAACTG-----TTCAC-----CTTGTGTTTTATGTCTTGGGATATTCA
CTCGAACAAGATAACATGTTTCTGGTGCAATTAAGATGTTAGTTAGCTGCATTCTTGCATTTGAAACTAAATTAGCAAGG
GGTGCAAATGAAAGCCTAACTATTCTGGCTTTGGCATATGACTATGGGCCTGTTAGGGCTAGCTGTTCCAAAAGTGCACT
TTCTGATTACCCATCTCACCCAAAGTAAGGAATGAGTAGTGTTTTATCTTCAAGTTGCACGTTCTACCCCTTGAACTCCA
AGCATTTCAAAACTAAGCATCTCTACTCATTAAGTTTAAGTCTGCAGCCTAACTATTTTATGCTTGAATGCAATTTGACT
AGCAAAACACATGTCTCAGTGAGGATAGTGGCTATATAAGCACAATTGACACCCGGCAATTCATGCTTCTGTTAGCCAAC
AAACTCTGGGGTTATTTCTTCTGGCCTGAGTCCATCAGGCTGATATGATGCTAACCCAGATCTTCTGTCTCCTATTTCCC
CAGGAAATTTCAGGGATGCCCACCTCTTTGAAGGAAGAGCCACGGCAGGCAGCTGCCTCCCCAAATTCTAGCGGTGAACC
ATCATCCTCTGGGACGATGAAAGAAGACAGGAGCGAAATCCCATAAGCTTCATCTGCATCTTGCAAGGAGATGGGTATCT
CAGGATGATAGGCGCTGATTTGTGATCATAGAGATGTAAATAAGTTAGCATGCTTGAGGCGAGGCCTGGTTTGGTTTACA
GCTCTGAAGAGCACATTTTCCTGGCGGATGGTAACGTGTGTGATCATTTTTCAAGCCACTTGCATTGCATCTA-------
--------------------------------------------------------------------------------
--------------TTAGTTGGGGTCCATATCTTCCTGCCATATGGGTAGATAGCCTATAATCGCAGAACAATACTGTTG
TGTTGTACATGTCTTCTGTTTAATCAGATTGATTGGAGGTTCTGTTTTGCATTCCAGGGTTGGCAGGCACACTGCGGCTT
ACATACATCCCTTGAGCTTAGTTTCAAACCAGTTCATGGGGGTTGTAGAATGCATCAGGATTTCTTGCTACTAAGTTTTG
TAATGGACACCAAATCTGATTGTGAAGACCCTTTTTAG---CTC----TTTTTTTTGGAAATGTAAGCACCTTCCATTGG
ATTTTAGGGCTATTACA---------------------------------------------------------------
-------------------------------------------------------TACATGGGGCTCAATTGATGGAATT
TATGCAAGCGCAAGATCATATCGCTAGGCACAAA-TCTTAGCAGCAGAACATGCAGCATCATCGCTGGGGGTTGGGAGAG
CGACTCCAAGATCACACGCTCCACC-----T-----AGAGAGGGCGTAGATGGAACGAGGATCTTCGACCCAGATACCAA
ACCGACTGAAGCTTATGAAATTCTGGAAGTTCCTCTTAAAAAGTCGTTTACATGAGGATCTTAGTGCTTGTGCGTTTGAG
AAGTTAGGTTTTTACTCGGTAAGATCGGCTCATCGGTTGCGGTATGATGAGAAAGCGCAGTTGGAGGATACTAGGAGTGA
CACTGCAGCAAACTCAATCTATGCCATTGTGGTCCATGAGACCTGCTTTGCAAAAACACTTTCTGCAAGGGTGAAGGGGA
TTCATTACGACCTGGTTTT----ATCAAGGTTAATGTCGATGCGGCCTACT-------------------------
>chr1B_297
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GCGAAACCTCCTTTGTCTCGCAAC
---AGGCGATACATAGCCACTCGCCGCAAATGGTAGCCCGTCTCGAGCTCGCCTTCCTCGTTCCCCAGAACTCGCTCGTC
TTCCTCGTTCCTCTTTGAGGTCGAGCCCTCCTCCG---------CCTCCTACCTGCTGATTGGGGCGTTCGATCCGGATT
CCACCTGCTCTGCTTGGTAAGCGTGCCCTCTAGCTTCGCCTCCCGCTGTAGTGAGGA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATCGTCCCGCGGTGACCTAAATCGCCGGTGCCCCTTCCGT
CTTCCTCGCCTCCGGCACGGCTCCGCCGCCACGCGATCTATCGCTCCGGCGAGGCCGGCCTTTTCCATCTGCTTCCTTAG
CTCCCTGTGTTGATTCTGAAGCTTCTGCCGCTGCCCCCA-TCGAGCCGCTTTTGCTGTTAGTTGTTATTGACGAAATTTT
CATCCAGATAGTCAAAATA-------GGTACTATTTCATAGCTGTTTCGGGTTATTATATGGCCTTATGGATGCTATGCA
TAAACAAAATAGTCACCGCTGCAATTGTGCAGCAATATCCGAATAGTCT----ACATGGAACTGGAATTCTGTCAACCAC
TGTTTTCATTCTCTCCAAATCTAGATAAGCGTAGTCGAGGATTGGCTTAAGCACCATTCATCTGTTTCTGATGTGGTCTG
TACCCTACCTCAAACAGGATTAGAAGATATAAAG-AATGGCTGCACAAGACACTCCTATGATCACCGAGGATGACTATGA
GGTACCCATTTTTA---TTTTTATTTTATTACAGAGCGCTTTTACTAGTGAACTACCACAAGATATCTCTTGTACAATAT
TTTTCTCATGGCTACAGGATCACAATCGCAGGAAATGTTTTTAATGCGCATGTGATATT-ACCAATTTTGTGTAACATTA
CTCGCATATTATCGGCTAAATAGTGCTCAAAGTTCAACTTAAGCTGGCCAACCATGCCCTATA-ATATCAGCAGAGTAAG
AAAGAGAAGAGTCTGAGTTCTTGTTTTACATG-TTGCTATATGTCCGAAATTCTCTGATCCGCACCGGTTTGGACACATG
GGAGAGTTGCTATGTTGTTTACCAATGCTAGATACACATAAGATATCTTCAAGTAATATAGTCTTCAATTGTTAGATTAT
ACTTGAAAAAGAATTTGAGTACTCCCTCCGTCCCAAAATAAGTGTCGCTGATCTAGTACAACTTTGTACTAACATTGTAC
TAAATCAGCGACACTTAATTTGTGACTGAGAGAGTATGATGTAAGGCCCCTCCCAATGCTCCACCTTGTACAGGTGCTAG
GGTTACCAACTAAGCAAAAATTCTGATGTGGCATGCTAGTTAAGAAGAGAGAGAGTAGTATGGTGACCCCAGGAAGAAAC
GGTGCTAAGCACGTGTACCTAGGTGGAAGCAAAATTCTGAGTCTACAACTAATTAAATGCATGAGGCTTAGCACCCAAAA
ACTTAGCACCTTGCATTGGGGACTTGAGTTGCTAAGGCATTTAATATACTTAGCACCTCATCTAAGCACCTTTGCATTGG
AGGAGGTCTAACTGTTGGACCAGTTCATCTTATTTTATGCTTTTACTTG-AACAAGATTTTGGTGGGAATTGTATTTCTA
AATCAATTGTTTGTAAGGATAAAAAAAATCTACTCTTGTTGAGTTTTTGCTGTTGTTGTGAGCTATGTGCCTACGTTTTT
CAGACTCAGCAGAAGAAGCAAGCTGCTGCAGATGTTCTTTTCAACTATTCACAGTTTGTTATGGTGTGCATTGGTGAGGG
AGTTCGCCCGACTGATCTCCGGTTGCATCTTATGAAGGTAGACTTGCTATCCTGTAACTTGTTATGTTTTT-TAAATGTT
GCACATTTATTACCAACATTTTTAATGTTGGCCCTAAGCATGCGAGT------ACCTGTTCCTGCCAAGAATTTCTTCTT
TGTGTACCCACAACAGTTTTTTTAGGTGCTCATGATTAATTTCCCCAAGCA--GAGAGGCCCAGGCCTTTACATACTCAA
GAGTAGATACATTATATTTTATTAGGGACATGTCTATTCTTAAGCCAAAGGAAGGAATTATTAGAGCAACAAATTTGATC
CTGAATCAGATAATACCAATTCGGTACCTTTCACTAATTCTTATTCCTGGAGGGCACTTTTATGTTTAGGATTTCTGGAC
CTCTGAGATCATAAGTTTTATGCACCATTCGCCTATAGTGGTTTACATGAGATATTGTTTCTATCG-------------C
ACATATTTGCTACTCCTTCCGTCCCATAATATAGGACGTTTTTTGACACTAGTCTAGTGTCAAAAAATGTCTTACATTAT
GAGACGGAGGGAGTAGAGTATTGCCATGCATGGGAACCAAA-ATGGAACTGTTTTTAACAATTTCTGAACTTTATGCATT
TCATCTTTCGCTATGATTTCCTATGGAGTTCAAATTGACCTGTTTCTCTACACCCTATAATGTAAATTAATGCC-TTTAG
TTAAATATCGACAAGTGGATATTCGCCTTGATCATTTGATCACTCCATGGATGCT-TTTCTTCTTTTCATTTGATTATTT
ATTCTAACTTGCATAATTATTATTCTATCCCTTTGTCACTCCTGAG-TTTGAACCCTTCGTTT-TCTGCTTGAAGGGTGT
GCAACTGTTTTTTTTTTCCTGAGCAACCGGAAGGGCTTCAAGCCTTCGATTGGTGATCCCAAGCACCTGGGATGTCCATT
AAGATCATTGTAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCTCTGCGTTTTCTCGAAAAAAAAAGGAACTTCGCCTTTCCATTAAGAAGAGTAG-----GAACTGG
CCAGTTAATAGGGAAAGTTGGCCAGAAACCGATACATCAGTGACACACACACCAGCACCGAGATCGCGCACCAGGCGAGC
CGCCGGCTTCGCCACACAAGCAACTAGAGCCAACACCCTACAACCAGATTCGAAGCCGCCACGCTGACTCCGGCATCCAC
GCCGATCCCAAGGCCACAACCAGACGAGTCGACGACTCAGTCACCCAAGCAACCAGAGACGGCGCCCTACAACAGCACAA
CAGTTTTTGGAGCTACTGCTCGGACTTACAAACTTAAAACACACGCTGACCCTGAGGCTGAGCACTAGGCGAGCCGCTAG
CTCCGTCACTCAAGCAACTGGAGCTGACACCCCACAATCTGACCCGAATCTGCCGCTCCAGCATCCACGCCGACCCCAAG
CCGATACCCTAAGAAGACATCGAGATCCGGAGCCACCGCTCTGACCTCCACATCGGGTGAGGCCGTGCGCCGCCCGATTC
GCTGGCCCGACCACGGCGTCCACCATGGATGCTG-CATGGCAACTTCATTCGATAGAGTCTTATCTGGCTAGGCCATGGC
CTCCTAAGGTGACGCCCCCAAGGAGGAAGTGACGAGGACGCCGCCGTTCCCTCCTCCGGCAGAAACAGGGGACTTGAACT
TTCACCTGGAGGATTCAATACCAGAGACTTTGGGAGATGAAATAGAGCACCCATGATGCCCCCTCCAAGGAGGGGAACGA
CGCCCACAGGTGTCGCCATCGTCGGCGCCAGCTAACTG-----TTCTATTCATCTTGTGTTTTATGTCTTGGGATATTCA
CTCGAACAAGATAACATGTTTCTGGTGCAATTAAGATGTTACTTAGCTGCATTCTTGCATTTGAAACTCAATTAGCAAGG
GGTGCACATGAAAGCCTAACTATTCTGGC------ATATGGCTATGGGCCTTTTAGGGCTAGCTGTTCCAAAAGTGCACT
TTCTGATTACCCATCTCTCCCAAAATAAGGAACAAGTAGTGTTTTATCTTCAAGTTGCACGTTCTACCCCTTGAACTCCA
AGCATTTCAAAACTAAGCATCTCTACTCATTAAGTTTAAATCTGCAGCCTGACTATTTTATGCTTGAATGCAATTTGACT
AGCAAAACACATGTCTCGGTGAGGATAGTGGCTATATAAGCACAGTTGACTCCCGGCAATTCATGCTTCTGTTAGCCAAC
AAACTCTGGGGTTATTCTTCTGGCCCTGAGTCCATCAGGCTGATATGATGCTAACCCAGATCTCCTGTCTCCTATTTCCC
CAGGAAATTTCAGGGATGCCCACCTCTTTGAAGGAAGAGCCACGGCAGGCAGCTGCCTCCCCAGATTCTAGCGGTGAACC
ATCATCCTCTGGGACGATGAAAGAAGACAGGAGCGAAATCCCATAAGCTTCATCTGCATCTTGCAAGGAGATGGGTATCT
CAGGATGGTAGGCTCTGATTTGTGATCATAGAGATGTAAATAAGTTAGCATGCTTGAGGCGAGGCCTGATTTGGTTTACA
GCGCTGAAGAGCACATTTTCCTGGCGGATGGTAACGTTTGTGATCATTTTTCAAGCCGCTTGCATTGCATCTA-------
--------------------------------------------------------------------------------
--------------TTAGTTGGGGTCCATATCTTCCTGCCATATGGGTAGATAGCAAATAATCGCGGAACAATACTGTTG
TGTTGTCCATGTCTTCTGTTTAATCAGGTTGATTGGAGGTTCTGTTTTGCATTCCGGGGTTGGCAGGCACATTGTGGCTT
ACAT----TCCTAGAGCTTAGTTTCAAACCAGTTCATGGGTGTTGTGGAATGCATCAGGATATCTTGCTGCTAAGGTTCA
TAATGGACACAAAATCTGATTGTGAAGACCCTTTTTAG---CTCTCTTCTTTTTTTTGAAATATAAGCACCTTCCATTGG
ATTTTATTAGGGGTATTACATACTCCCTCCGTCTGGAAATACTTGTCGGAGAAATGGATGTATCTAGATGTATTTTAATT
CTAGATACATCTTTTTTTATCCATTTCTCCGACAAGTATTTTCGGACGGAGGGAGTACATGGGACACAATTGATGGAATT
TATGCAAGTGCAAGATCATATCGGTAGGCACAAAATCTTAGCAGCAGAACATGCAGCATCA---CTGGGGGTTGGGAGAG
CGACTCCAAGATCACCCGCTCCAGCTCTGTT-----AGAGAGGGAGTAGATGGAACGAGGATCTTCGACCCAGATACCAA
ACCGACTGAAGCTTATGAAATTCTGGGAGTTGCTCTTAAAAAATCGTTTACATGAGGATCTTAGTGCTTGTGCGTTCGAG
AAGTTAGTTTTTTACTCTGTACGA-CGGCTTAACGGTTGCTGTCTGATGAGAAAGCACAGTTGGAGGATACTAGGAGGGA
CACTGCAGCAAACTCAATCTATGTCATTGTGGTCCATGAGACCAGCTTCGCAAAAACACTTTCTGCAAGGGTGAAGGGGA
GACATCACGTCCTGGTTTTATCAATCAAGGTTAATGTCGATGCGGCATACT-------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS----S--------------------S--------------------------------------------
-S------S-------------------------------------S------------------SS----------S--
------------S----------------------SSSSSSSSS------------------------------------
-----------------------------S--------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
-----------------------------------------------------S----------S---------------
--------------------------------------SS----S-----------------------------------
S--------------------------------------S----------------------------------------
S--------------------------------------------SSSSSSSS---------------------------
-------------------------------------------------S----------------------S-------
---------------------------------SS---------------------------------------------
------------------S---------------------S---------------------------------------
-----------------S------------S-----------S----S--------------------------------
---S---------S------------------------------------S-----S-----------------------
--------------------------------S-----------------------S-----------------------
--------------------------------------------------------------------------------
-----------------------------------------S-----------------------S--------------
------S---------------------------S-----S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S---------------------S-------S------------------------------
--------------------------S---S-----------------S------------S------------S-----
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
---------S-----------------------------------S----------------------------S-----
S----------SSS------------S------------------------------------S----------------
-------------S------------------------------------------S-----S--SSSSSSSSSSSSSS-
--------------------------------------------------------------------------------
-----------------------S-S---------------S--------------------------------------
--------S----S-S---------S---------------------S--------------------------S-----
---------S-------------------S-----S-------------------------------S------------
-----------S----------S-----SS--------------S----------------------S------------
----------------S------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S-----------S-------S----
-----------------------------------------S----------------S---------------------
---S--S-------------------------------------------S----------------S--S---------
------------------------------S-S---------S------------------------S------------
---------------------S-------S--------------S-------------S-----------S---------
---------------------S-----------------------S----S----------------S---------S--
-------------------------------------------S------------------S-----------------
---------------S---------S--------S---------------S-----------S-----------------
--------------------------------------S-------------------------------S--------S
------------S-----------------------S-------------------------------------------
----S--------------SS---------S-------SSSSS-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
---S-S--------------------------------------------------------------------------
-----------------------------------------------------S-------------------S------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S---------------------------------------------S-------------------
-----------------------------------S-------------------------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS---------------------------------------------------S-------------S
---------------S----------------S-----------------------------------------------
--------------S-------------S---------------------------------------S-----------
------S---S-------------------------SSSSS------------------S--------------------
---------S----------------------------------------------------------------------
------------------------------------------------------------S-------------------
-----------------------------------------------S-SSS-------------S--------------
S------------------------------SSSSS-------S---------------------S------SS------
-------------------------------------SS-----------------------------------------
--------------S---S------S-S-S------------S-------------------------------------
------------S-----------------------------S-------------------------------------
------S------------------------------S-------------SSSSSSSSSSSSSSSSSSSSSSSSS
>forward_387
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-----------------------------------------------CTCGTCTTCCTCGTTCCCTG-------------
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>reverse_2428
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---------------------------CTGGCCCTAAGCATGTGAGT---------------------------------
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>forward_1801
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--------------------TGGGACTGAGGGAGCATGATA---------------------------------------
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>reverse_4421
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--------------------TTCGGCGCCAACTAACTGTT----------------------------------------
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>forward_4333
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-------------------------------------------------------------------------TTGAACG
TTCACCTGGAGGG-------------------------------------------------------------------
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>reverse_6108
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---------------------------CCATATCGGTTGCTGCCTGA---------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
