>input_sequence_24755
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-----------------------------------------------------ATGAGAGATGAGACTCCAACCAAGAAC
AGGGTAAGTGACCAGACTACACATCAATCAACAGCTACTAC---TAT-----TATCTTCACAATTTTTCTGTGTCCGGTC
TCTGATCTTGCTTTGTTTCTGATTGGTGTGGGGGAAAAGCTGTCCTGGTCCAAGACCATCGTTAGGAAGTGGTTCAACAT
CAAAACAAAGGCCAAGGACTTCCATTCGGATTATGGAGTCGAACAAGGTACTTCCATTCAGCTGTTAACTTCAGACTTTT
TTCTTGCTCGGTGTTGTTCTGGCTGTTGGATCACATAAATTTCCTGTTGTTTCCAGAAGCAAGTTTGACCTCCTGCCTCC
TGCTCACGTGTAGTGTAGTGGA--TTTTTTTTGTTATTGTTGCAGAAACAATCAAACACATGCTTGAGACCTTAGTAAAA
ATGCAGTTTGTTTTTACTGTCCTTGTGCTAAAATTTTGCTTTGACTATTTCAGTGGGGATGCAGTGGAGGACCAGCTTCT
CAGAGAGGGATGTATGCAAGACCAAGAAGAGCAGAACAGGTACTACATTTTGCTTGCGTCCTCAGTCCTCACAGTAACTA
TTACTACTGCATTTTCAGATTTTTCACCCGTTTCCGTGGGTGCAAAATTGGCCGGTCAAAATGGTGTCCAATGCCCAACT
GACTGAATTAACTCCACCT---GTCCTCCTTGTTAGAGAGGTTGCCCAGGAAGAACTCCGATCGAGACTGTCGAGCAGGA
AACGGGATCGACCGCGCCTACATCACAAACACGCAGGACTACAGGTATATAATGCCTCTGTACAACACGACCGATTCGCC
GATCATTGCGAAAGCGAAGCCAGTTTGATGTGACAATCCATGTAACCGTGTGCTTAGGGTCTTTGCTGGTACATGGAATG
TGGGAGGAAGGTCACCATCCAGTCATCTGAACCTGGAGGACTGGCTCCATACTTCTCCTGCTGCTGATATATACGTCATT
GGGTATAACCTCTAAACTCATGCATTTACTTGAGCAGATATTCGTTT---GATGTATAGAGCATAAACATCCTGAAAAAT
GGTACAAATGAATAATGAGAATGTTGTTGTCCTATCAGGTTTCAGGAAATTGTTCCTTTGAATGCTGGCAACGTCCTGTT
GACCGAAGACAACGGTCCAGCCAAAAAGTGGGTTTCTCTTGTGAGAAAGACGCTAAATAATCTAGATCTCCAGGGCTCTG
CTGGGTACAACTACCATACCCCGTCGCCGGCTCCGGAACCTATCGCGGAGCTTAATGTTGATTTCGAGAGATCATCGAGG
AGGCAAAAGAACTCTTCGTTCTTCCATCGGCGTTCATTTCAGTCCTTGGGTCGAAGCTCAAGAATTGACATGATGGATCC
ACACTCCCTAGTGGACCGACGGTTCAGTGTTTGTGACCGGATTAGCTTTGGGAGCAGGCCGAGCGATGTTGACACCAGTA
TGAGGTGCGGTGGGTCCTCTGATGATGAGAATATGGACGAGGAATCACCTGGTGGCACCTTCTTCTCACCAATGCCATGT
GGATATGGTGCTCCACTATCAACAGATGACAATAACAGACGGTTGGTAAACTCCAAGTAAGTATTCTTGACAATGAATAT
AAATTCTTTGTGCCTGTAGCATAACTTAGTTGTTGCTGAGACTAAGTTGCTA-ATGACACAGTTTCCACTGGAAAGTAGG
AACTACTAATATTTCATTGAAATATCTTACAAG---C------TTCATTCATCACTTGGAATATGACTAAAGTTCTCTGA
ACTGAAACTCAGATTTTCTATGACACAGCAGGTATTGCTTAGTTGCTAGCAAGCAAATGGTTGGGGTTTTCCTAATGGTA
TGGGTGCGGAGTGACATAAGGGAGCATGTGAAGAACTTGAAGGTGTCATGTGTTGGAAGAGGCTTGATGGGATATCTTGG
AAATAAGGTACTGTTTGCTATTTATTACTCAGCTTTTCTAGGTGTGCAGTAGTCAATCTTAAGTTCG----------TTA
TTTTTTTCTGGCAC--TTTTTTTGGCTTTACATAGTTTTATAT-TGACCCATTCCCTCTTTTT----TTAGGGATCGATA
TCAATTAGCATGTCTCTGCATCAGACAAGCTTCTGCTTTGTTTGCACACACTTGACATCAGGTCAAAAAGATGGCGATGA
ACTTAGAAGAAATGCGGACGTGGTGGAAATATTGAGGAAAACCAGATTCCCACATGCTCATGGTGCACGCGACGAGAAGT
GGCCAGAGACAATCCTTGACCATGAGTATGTTCTACTTCCAGCTCGGTTATACGCAAGTAGAATAAAACTGCGAAAATGG
AACACCAATATCTTGGG----GTCTCATATATTTTGTTTCTTTCAGTCGAATAATATGGCTCGGGGATCTGAATTACCGG
ATAGCTCTTTCCTATCGCTCTGTGAAGGCTTTGGTTGAGATGCACAATTGGAAACAATTGTTGGAAAAAGATCAGGTAAG
CCAT-----------------------------ATCATATACCTCTTGAAGCAACTTGTGCTA-----------------
-------------------------------------------------------------CTGTTGCAATCACATTTTT
GGCCTTGTTTCTTACCTGAACATTTTCTGCAACAGCTTCGTATAGAGCAAAGGTTCGGTCGGGTATTCGCGGGCTGGAAA
GAAGGAAGGATTTACTTTCCACCCACGTACAAGTACTCGTACAACTCCGACAGATACGCAGGCGACGACATGCACCCAAA
TGAGAAGCGGAGGACACCCGCATGGTAAAAATTCACAAAACAAAACTCATCAATGCATTATTACATCCAAGCATGTCTTC
TTCCCCTTTTACAC---CCTTATTACTTTCACCTCAACAAAGCATTTTTTGTCTTTCTGAAGGTGCGATCGGATTTTATG
GTATGGCAGAGGCCTAAACCAACTATGTTACGTCCGCGGCGAGTCTAGATTCTCGGACCACAGGCCTGTATACAGCATTT
TCACGGCGGAGGTTAAACTGCCGAGCCAGGCCCAGTTCGGCAGCTTCACTCGGTCCAGCTCCCTAATGGGGGTGGATGAA
CTGCCATATCCAACTTATCCACGCAGTTACACAGATATCAACTTTTACTGA-----------------------------
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>chr4D_1_TraesCS4D01G015900
CAGTAATAAACACCATTAGCTTAGCTTAGCTTTGCTTTGCTTCTTTGGCCCGCATCGGGCTTGGAGCTAAAGAGCAAAGG
CTACATAGTA---G-----TAGAAGGCAAAGCAAAGCGCAGCAGCCAGCAG---TAGCCGAAGAGCAG----AGCAGAGC
AGCGGAGGCCCCCAAACCCAAAGCTTGCCAAAGCTTTCGCTTTATTCCCTTTATATTGGCCTCCGTGCCTCCCTCCCCCC
ACA---CTCTGCTA--------------------------------------CTGCCGCTGCTCCCTCGCCTCGCTCAGT
CC-GTCCGTCCCCTCCTCCTGCTCGCCTCCCTCTCCTTGAACCCACAGACCGCGCAGCGC---GCAGCGCAGAGCACCGT
G--------------------------------------------------------------------TTGCGCGCGAC
GTGGGCGCCCGG-----------------CTCCGTGTCCTCCGCCGGGTTCTTTGGATTCACTTCCTTTCTCCCAGGTGC
CAGCCATCCCCTCCCCCATTTATTTCCGCTGCCCCTCC----------CCGGCCCCCGGGCGTTCCCGCACGGCCCGGCC
ATTAACTCCCGCCCGCTCGCCCGCCACCGGCATTGATCCGGCCGGGCGTCGTGAGCTGGGCGTCTGGTGGGC-GTGATTG
CAGGAGCTTTCTCTCTTTACAGGCTCGTGCCGCCGGCCTCTTTTTGGGCCGTCTTTAATAATCCTCGCCTCTGCTTCCTG
AATCTTGCGGACGGTCTCTGCTTCCGTTCTTGATCTCGTTCCCCCACCCCCAAATACGCCATTCGCTGGTCCTTCTTTTC
CCCGTCAATCGCCTCTCGAGGGATTCTTGCTCCTTTTG--GTCCGAGCCGCCGAGCAATTCTTGGGAATTCCTGCTTCTC
CTTCCCAGTGTGGAATCTTCCAAACAAGGGGCGAAAAAAGGGGGAGGGAGAGGAAGAATCCGCCCTCCTCCCTTTTGCTT
TAGGATATCTA-TATAAACT-GTTCTTAGTGGGGGTACTGGAAAAGGGGGGCGAAATTGGGAGGGGATTGGAGGGAGGAG
CC-----ATCCCATCCCTGGAC--------CTGTATGAGGAAGCATTGAGACAATGAGAGATGAGACTCCAACCAAGAAC
AGGGTAAGTGACCAGACTACACATCAATCAACAGCTACTAC---TAT-----TATCTTCACAATTTTTCTGTGTCCGGTC
TCTGATCTTGCTTTGTTTCTGATTGGTGTGGGGGAAAAGCTGTCCTGGTCCAAGACCATCGTTAGGAAGTGGTTCAACAT
CAAAACAAAGGCCAAGGACTTCCATTCGGATTATGGAGTCGAACAAGGTACTTCCATTCAGCTGTTAACTTCAGACTTTT
TTCTTGCTCGGTGTTGTTCTGGCTGTTGGATCACATAAATTTCCTGTTGTTTCCAGAAGCAAGTTTGACCTCCTGCCTCC
TGCTCACGTGTAGTGTAGTGGA--TTTTTTTTGTTATTGTTGCAGAAACAATCAAACACATGCTTGAGACCTTAGTAAAA
ATGCAGTTTGTTTTTACTGTCCTTGTGCTAAAATTTTGCTTTGACTATTTCAGTGGGGATGCAGTGGAGGACCAGCTTCT
CAGAGAGGGATGTATGCAAGACCAAGAAGAGCAGAACAGGTACTACATTTTGCTTGCGTCCTCAGTCCTCACAGTAACTA
TTACTACTGCATTTTCAGATTTTTCACCCGTTTCCGTGGGTGCAAAATTGGCCGGTCAAAATGGTGTCCAATGCCCAACT
GACTGAATTAACTCCACCT---GTCCTCCTTGTTAGAGAGGTTGCCCAGGAAGAACTCCGATCGAGACTGTCGAGCAGGA
AACGGGATCGACCGCGCCTACATCACAAACACGCAGGACTACAGGTATATAATGCCTCTGTACAACACGACCGATTCGCC
GATCATTGCGAAAGCGAAGCCAGTTTGATGTGACAATCCATGTAACCGTGTGCTTAGGGTCTTTGCTGGTACATGGAATG
TGGGAGGAAGGTCACCATCCAGTCATCTGAACCTGGAGGACTGGCTCCATACTTCTCCTGCTGCTGATATATACGTCATT
GGGTATAACCTCTAAACTCATGCATTTACTTGAGCAGATATTCGTTT---GATGTATAGAGCATAAACATCCTGAAAAAT
GGTACAAATGAATAATGAGAATGTTGTTGTCCTATCAGGTTTCAGGAAATTGTTCCTTTGAATGCTGGCAACGTCCTGTT
GACCGAAGACAACGGTCCAGCCAAAAAGTGGGTTTCTCTTGTGAGAAAGACGCTAAATAATCTAGATCTCCAGGGCTCTG
CTGGGTACAACTACCATACCCCGTCGCCGGCTCCGGAACCTATCGCGGAGCTTAATGTTGATTTCGAGAGATCATCGAGG
AGGCAAAAGAACTCTTCGTTCTTCCATCGGCGTTCATTTCAGTCCTTGGGTCGAAGCTCAAGAATTGACATGATGGATCC
ACACTCCCTAGTGGACCGACGGTTCAGTGTTTGTGACCGGATTAGCTTTGGGAGCAGGCCGAGCGATGTTGACACCAGTA
TGAGGTGCGGTGGGTCCTCTGATGATGAGAATATGGACGAGGAATCACCTGGTGGCACCTTCTTCTCACCAATGCCATGT
GGATATGGTGCTCCACTATCAACAGATGACAATAACAGACGGTTGGTAAACTCCAAGTAAGTATTCTTGACAATGAATAT
AAATTCTTTGTGCCTGTAGCATAACTTAGTTGTTGCTGAGACTAAGTTGCTA-ATGACACAGTTTCCACTGGAAAGTAGG
AACTACTAATATTTCATTGAAATATCTTACAAG---C------TTCATTCATCACTTGGAATATGACTAAAGTTCTCTGA
ACTGAAACTCAGATTTTCTATGACACAGCAGGTATTGCTTAGTTGCTAGCAAGCAAATGGTTGGGGTTTTCCTAATGGTA
TGGGTGCGGAGTGACATAAGGGAGCATGTGAAGAACTTGAAGGTGTCATGTGTTGGAAGAGGCTTGATGGGATATCTTGG
AAATAAGGTACTGTTTGCTATTTATTACTCAGCTTTTCTAGGTGTGCAGTAGTCAATCTTAAGTTCG----------TTA
TTTTTTTCTGGCAC--TTTTTTTGGCTTTACATAGTTTTATAT-TGACCCATTCCCTCTTTTT----TTAGGGATCGATA
TCAATTAGCATGTCTCTGCATCAGACAAGCTTCTGCTTTGTTTGCACACACTTGACATCAGGTCAAAAAGATGGCGATGA
ACTTAGAAGAAATGCGGACGTGGTGGAAATATTGAGGAAAACCAGATTCCCACATGCTCATGGTGCACGCGACGAGAAGT
GGCCAGAGACAATCCTTGACCATGAGTATGTTCTACTTCCAGCTCGGTTATACGCAAGTAGAATAAAACTGCGAAAATGG
AACACCAATATCTTGGG----GTCTCATATATTTTGTTTCTTTCAGTCGAATAATATGGCTCGGGGATCTGAATTACCGG
ATAGCTCTTTCCTATCGCTCTGTGAAGGCTTTGGTTGAGATGCACAATTGGAAACAATTGTTGGAAAAAGATCAGGTAAG
CCAT-----------------------------ATCATATACCTCTTGAAGCAACTTGTGCTA-----------------
-------------------------------------------------------------CTGTTGCAATCACATTTTT
GGCCTTGTTTCTTACCTGAACATTTTCTGCAACAGCTTCGTATAGAGCAAAGGTTCGGTCGGGTATTCGCGGGCTGGAAA
GAAGGAAGGATTTACTTTCCACCCACGTACAAGTACTCGTACAACTCCGACAGATACGCAGGCGACGACATGCACCCAAA
TGAGAAGCGGAGGACACCCGCATGGTAAAAATTCACAAAACAAAACTCATCAATGCATTATTACATCCAAGCATGTCTTC
TTCCCCTTTTACAC---CCTTATTACTTTCACCTCAACAAAGCATTTTTTGTCTTTCTGAAGGTGCGATCGGATTTTATG
GTATGGCAGAGGCCTAAACCAACTATGTTACGTCCGCGGCGAGTCTAGATTCTCGGACCACAGGCCTGTATACAGCATTT
TCACGGCGGAGGTTAAACTGCCGAGCCAGGCCCAGTTCGGCAGCTTCACTCGGTCCAGCTCCCTAATGGGGGTGGATGAA
CTGCCATATCCAACTTATCCACGCAGTTACACAGATATCAACTTTTACTGATTGTGCATCCCCACGGAGCCAAGGTTCAT
ATACTACTAG----------------ACTGCATTGTCTCATTGTTTAAGCTGGCTGCTCTGTCAGCTTCACTGAATTCCA
TGTGAAGGCATC---GTACTCATCATCATCATAGCTTCCCTGCAGACATTCTTTCTTCGGTGCCAGAGTAGGAGTAGGCC
TGATGTCTGATG---AAACTTCATTCCTCCCAAGATTCCAGCAACTGGAATATTTTCCAGGCAACAGGTGATTCTGAGCT
GCTCTGCCCTTTCCGCACTTCAGTTCTTGTGTCCTC---------GGTGCTGTGATAGTAC-----TATTTTTAATGG--
---------------------------AAAGTTTGCTTGG-ACTAACAGGTACCTCACCTCTGACCGTTGTGCAGATTGC
AGATACTCTAGCCAAGAAGATGGCTTGTAATTCCAGATTTAGGTAGGTATGATGCATACACTACTAGCACTTGATA----
TCGTTTTGGAGAGA-AGTGTAAAACTGGAAGACTGAC---ACCTTCCCACACCTATTCTCTATTCTACAGGAAGGTTTGC
GCCGTT----CGTTCTGCACAGTTTTGATTGATTCTAACCATCTACGGGCGGACACAAACGCAA----------------
-------CCAAAATGCAAGATAGTTGTGGTCCTGATTTGAGCTAGCAGTACGAGTAG---CCACTGACAGCCGAAGCTAA
TTTTGTGGCGTGCCTTTTGGATTATTTTTTTCCTTTTCCCGAGCGGTTTGTGACTCTGGAAGGGAAGGCTTGTTTTTCTT
TTTCCTCTCCGTTTT-------TTTGCTTGGTCTCGTGATGTAACAAGAGCCGCTTGGCTCAGCTCGGTCATTTTTAGTC
AAT---------------------AGAAAGAAACAGCCACCATTTGTACAGCATGACGTTTGTGCCGACAGAATAGAGTA
GTAGC------------------------------------------------------ACTGGAGTGTCCCGGCCCATG
CTTGGCAAGAAATGATCACCGGCACGGGCGCACACCTGTCCATGCATGCTTGTGCGCAAAGCAATGCT--------CCCA
GGA--------CAAAAGAAGAGAAAGTTTCACCCACAAGCCGCCGCTGCCTCT
>chr4A_29
----------------------------GCTTTGCTTTGCGTCTTTGGCCCGCATCGGGCTTGGAGCTGAAGAGCAAAGG
CTACACAGTGCTCCTCTCCTAGAAGGCAAAGCAAAGCGCAGCAGCCAGCAG---TAGCCGAAGAGCAGC--------AGC
AGCGGAGGCCCCCAAACCCAAAGCTCGCCAAAGCTTTCGCTTTATTCCCTTCATATTGGCCTCCGTGCCTCCCTCCCCCC
ACACTCCTCTGCTA--------------------------------------CTGCCGCTGCTCCCTCGCCTCGCCTCGC
TCTGTCCGTCCCCTCCTCCTGCTCGCCTCCCCCTCCTTGAACCCACAGACCGCGCAGCGCAGCGCAGAGCAGAGCGCCGT
CCGTCCTCTCCCGCCTCCCCCTCCACGACCCTCCAGCGCCGCCGGCGCCC-GCGAGCTCACTCCTCGCATTGCGCGCGAC
GTGGGCGGCCGGGTCGC------------CTCCGTGTCCTCCGCCGAGTTCCTTGGATTCACTTTCTTTCCCCCAGGTGC
CGGCCAGCCCCTCCCCCATTTATTTCCGCTG-----------CCCCTGCCGGCCCCCGGGCGTTCCCGCACGGCCGGGCC
ATTAACTCCCGCCCGCTCGCCCGCCACCGGCATTGATCCGACCGGGCGTCGTGAGCTGGGCGTCTGGTGGGTTGTAATTG
CAGGAGCTTTC--TCTTTACAGGCTCGTGTCGCCGGCCTCTTTTGGGGCTCTCTTTAA-----------------TCCTG
AATCTTGCC----GTCTCTGCTTCCGTTCTTGATCTCGTCCCCCCACCCCCAAATACGCCATTCCTTGGCCCTTCTTTTC
CCCACCAATCGCCTCTCGAGGGATTCTCGCCCCTTTTGTCT---GAGCCGCCGAGCAATTCTTGGCAATTCCTGCTTCTC
CTTCCCAGCGCGGAATCTTCCGAACAAGGGGTGAAAAAAGGGG-AGGGAGAGGAAGAATCCGCCCTCCTCCCTTTTGCTT
TAGGATATCTATAAACTGTTCGTTCTTAGTGGGGCTACTAGA-AAAGGGGGCGAAATTGGGAGGGGATTGGGGGGAGGAG
CC-----ATCCCATCCCACCCCTGGACCTGCTGCATGAGGAAGCATTGAGACAATGAGAGATGAGACTCCAACCAAGAAC
AGGGTAAGTGACCA-----CACATCAATCAACAGCTACTAATAGTAT-----TATCTTCACAATTATCCTGTGTCCAGTC
TCTGATCTTGCTTTGGCTCTGATTGGTGTGGGGGAAAAGCTGTCCTGGTCCAAGACCATCGTTAGGAAGTGGTTCAACAT
CAAATCAAAAGCCAAGGACTTCCATTCGGATTATGGAGTCGAACAAGGTACTAACTACATGCTGTTAACCTCAGGCTTTT
TTCC--CTCGGTGTT---CTGGCTGCTGGAT---ATGAATTTCCTGTTGTTTCCAGGAGCAAGTTTGACCTCCTGCTTCC
TACTCCTATGTAGTGTAGTA-ATTTTTTTTTGGTTATTGTTGCAGAAACAACCAAACACATGCTTGAGACCTCAGTAAAA
ATGCAGATTGTTTTCACTGTCCTTGTGCTAAAATTTTGCTCTGACTATTTCAGTGGGGATGCAGTGGAGGACCAGCTTCT
CAGAGAGGGATGTGTGCAAGACCAAGAAGAGCAGAACAGGTACTACATTTTGCTTGCGTCCTCAGTCCTCACAGTAACTA
TC---ACTGCATTTTCAGATTTTTCACCCCTTTCCATGGGTGCAAAATTGACCGGTCAACATGGTGTCCTATGCCCAACT
GACCAAATTAACTCTACCT---GTCCTCCTT---AGAGAGGCTGCCCAGGAAGAACTCGGATCGGGACTGTCGAGCAGGA
AACGGAATCGACCGCGCCTACATCACAAACACGCAGGACTACAGGTATATAATGCTTCTGTACAACAAGATCGATTCGCC
GATCATTGCGAAAGCGAAGTCAGTCTGATGTGACAATCCATGTAACCGTGTGCTTAGGGTGTTCGCTGGTACATGGAATG
TGGGAGGAAGGTCACCATCCAGTCATCTGAATCTGGAGGACTGGCTCCATACTTCTCCTGCTGCTGATATATACGTCATC
GGGTATAA-CTCTAAACTCATGCATTTACTTGAGCAAATATTCGTTTTTTGATATATAGAGCATAAACATCCTGAAAAAT
GGTCCAAATGAATAATGAGAATGTTGTTGTCCTATCAGGTTTCAGGAAATTGTTCCTTTGAATGCTGGCAACGTCCTCTT
GACCGAAGACAATGGTCCAGCGAAAAAATGGGTCTCTCTTGTGAGAAAGACGCTAAATAATCTGGATCTCCAGGGCTCTG
CCGGGTACAACTACCACACCCCGTCGCCGGCTCCGGAACCTATCGCGGAGCTTAATGTCGATTTCGAGAGATCGTCAAGA
AGACAAAAGAACTCTTCGTTCTTCCACCGGCGTTCGTTTCAGTCCTTGGGTCGAAGCTCAAGAATTGACATGATGGATCC
ACACTCCCTAGTGGACCGACGGTTCAGTGTTTGTGACCGGATTAGCTTTGGGAGCAGGCCAAGCGATGTTGACACCAGTA
TGAGGTGTGGTGGGTCCTCTGATGATGAGAATATGGACGAGGAATCACCTGGTGGCACCTTCTTCTCACCAATGCCATTT
GGATATGGTGCTCCACTATCAACAGATGACAACAACAGACGGTTGGTAAACTCTAAGTAAGTATTCTTGACAATGAATAT
ATATTCTTTGCGCCTGTAGCATAACTTAGTTGTTGCTGAGACTAAGTTGCTAGATGACACAGTTTCCACTGGAAAGTAGG
AACTACTAATATTTCATCGATACATCTTACAAG---CTTCATATTCATTCATCACTTGGAATGG--CTAAAGTTCTCTGA
ACTGAAACTCAGATTTTCTATGACACAGCAGGTATTGCTTAGTTGCTAGCAAGCAAATGGTTGGGGTTTTCCTCATGATT
TGGGTGCGGAGTGACATAAGGGAGCATGTGAAGAACTTGAAGGTGTCATGTGTTGGTAGAGGCTTGATGGGATATCTTGG
AAATAAGGTACTGTTTGCCATTTATTGCTCAGCTTTTCTAGGTGTGCAGTAGTCAATCTTAAGTTCGTTGTGTGCATTTA
TTTTTTCCTGGCAC--TTTTCTTGGCTTTACATAGTTTTATATATGACCCATTCCCTCTTTTTTTTCTTAGGGATCGATA
TCAATCAGCATGTCTCTGCATCAGACAAGCTTCTGCTTTGTTTGCACACACTTAACATCAGGTCAGAAGGATGGCGATGA
ACTTAGAAGGAATGCGGACGTGGTGGAAATATTGAGAAAAACCAGATTCCCACATGCTCATGGTGCACGCGACGAGAAGT
CGCCAGAGGCAATTCTTGACCATGAGTATGTAGTACTTCCAGCTCGGCTGTACCCAAGTAGAATAAAATTGCACAAATGG
AAGACCAATATCTTATATAGTGTCTCATATATTTTGTTTCTTTCAGTCGAATAATATGGGTCGGGGATCTGAATTACCGG
ATAGCTCTTTCCTATCGCTCCGTGAAGGCTTTGGTCGAGATGCACAACTGGAAACAATTGTTGGAAAAGGATCAGGTAAG
CCATTCTGGTCAGAGGTTCGGAACTGATAACATATCATATACCTCTTGAAGCAACTTGCGCAGCTCTG------------
------------------------------------------------------------------GCGATCACATTCTT
GGCCTTGTTTCTTACCTGAAAATTTTCTGCAACAGCTTCGTATAGAGCAAAGGTTTGGTCGGGTATTCGCCGGCTGGAAA
GAAGGGAGGATTTATTTTCCACCCACGTACAAGTACTCATACAACTCCGACAGATACGCGGGCGACGATATGCATCCAAA
TGAGAAGCGGAGGACGCCCGCATGGTAAAAATTCACAAAACAAAACTTATCGATGCATTATTACATCCAAGCATACCTTC
TTCCCCTTTTACA------TCATGACTTTCCCCTCAACGAAAACATTTTTCTTTTCCTGAAGGTGCGATCGGATTTTATG
GCATGGCAGAGGCCTAAACCAACTATGTTACGTCCGCGGCGAGTCTAGATTCTCAGACCACAGGCCTGTATACAGCATTT
TCACGGCAGAGGTTAAACTGCCGAGCCAGGCCCAATTCGGCAGCTTCACCCGGTCCAGCTCCCTAATGGGGGTGGATGAA
CTGCCATACCCAACTTATCCACGCAGTTACACAGATATCAACTTTTACTGATTGTGCATCCCCATGGAGCCAAGGTTTGT
ATTCTACTACTAGTACCAGTATATTCACTGCACTGTCTCATTGTTTAAGCTGGCTGCTCTGTCAGCTTCACTGAATTCCA
TGTGAAGGCATTGTTGTACTCATCATCATCATAGCTTCCCTGCAGACATTCTTTCTTCGGTGCCAGAGTAGGGGCAGTAG
------------------CTTCATTCCTCCCAAGATTCCAGCAACTGTAATA-TTTCCAGGCAACAGGTGATTCTGAACT
GCTCTGCCCTTCCCCCACTCCAGTTCTTGTG-CCTCCTCATGGTTAGTGCTGTGATAGCATATGCAGAGGGTATGCATTT
TTTATTTATTATACCACCATGAGTGCAAAAGTTTGCTTGA-GCTAAC----ACCTCAGCTCTCACCGTCGTGCAGATTGC
AGATACTC-----AAGAAGATGCCATCTAATTCTAGATTTTTAGGTATGTGATATACTTGAGTAGATC-----------G
TCGTTTTCGAGAGACAGTTTAAAACGGGACCACTAATAAGACCTTCCCACACTTG--------TCTACAGGAAGATTTGC
ACCGTCCGTCCGTTCTGCACAGTTTTGATTGATTCTAACCGTCATCCCTGGG-----CGGGCACACATTTCATTTCCAAA
CCAGAATCCAGAATGCAGGACTGCTCTGGTCGTGATTTAAGCTAGTAGATAGGGTAGGAGTCACTGACAGCCGAAGCTAA
TTTTGTGGCGTGCCGTTTGGA------TTTCCTTTTTCCGGAGTGGTTTGTGATTC-GGAAGGGAATGCTTGTTTTTCTT
TTTCTTTTCTTTTTTTCTCATATTTGCTTGGTCTCCTGATGTAACAAGAGCCACTTGGCTCGGCTCGGCTCGGCCCAGCC
CAGTCATTTTAGTCAAAATAGAA---AAAGAAACAGCCACCATTTGTACAGCATTATCATCATCATACCATCTGAAGCTT
GAGCGGTTGAGCCGTTGTGCTGTGCCTATGATGGATTTACTATGTTTATAGTGCTTACTACTGGAGTGTCCCTCCCCATG
CTTGGCAAGAAATGATCACCGGGCAGCAGAG----------------GCTTGCGCGCAAAGCAATGCTCCCTCCCTCCCA
GGA--------CAAAAGAAGAGAAAGTTTCACCCACAAGCCGCCTCTGCCTCT
>chr4B_29
----------------------------GCTGTGCTTTGCTTCTTTGGCCCGCATCGGGCTTGGAGCTAAAGAGCAAAGG
CTACATAGTACTGG-----TAGAAGGCAAAGCAAAGCGCAGCAGCCAGCAGAAGTAGCCGAAGAGCAGCAGCAGCAGAGC
AGCGGAGGCCCCCAAACCCAAAGGCCAAAGCTCTC--CGCTTTATTCCCTTCATATTGGCCTCCGTGCCCCCCTCCCCCC
ACACTCCCCTGCTCCCTCACTCACTCCGCCCGCCCCCCTGCCGGCCTGCTAGCTGCTGCTCCTACCTCTCCC--------
-----CCGTCCCCTCCTCCTGCTCGCCCCCCTCTCCTTGAACCCAGAGACCGCGCACCGCAGAGCAGAGCAGCAGCGTGT
CCTCGTGCTCTCTCCTCCCCCTCCACGACCCTCCAGCGCCGCCGGCGCCCCGCGAGCTCGCTCCTCGCATTGCGCGCGAC
GTGGGCGGCCGGCTCACACAGGCGCCCGGCTCCGTGTCCTCCGCCGGGTTCCTTGGATTCACTTCCTTTCTCCCAGGTGC
CGGCCAGCCCCTCCCCCATTTATTTCTGCTGCCCCTTCCCCGCCCCTGCCGGCCCCCGGGCGTTTCTGCACGGCCCGGCC
ATTAACTCC--------CGCCCGCCACCGGCATTGATCCGGCCAAGCCTTGTGAGCTGGGCGTCTGGTGGGC-GTGATTG
CAGGAGCTTTC--TCTTTACAGGCTCGTGTCGCCGGCCTCTTTTTGGGCCGTCTTTATTAATCCTCGGCTCCGGTTCCTG
AATCTTGCC----GTCTCTGCTTCCGTTCTTGATCTCGTCCCCCCACCCCCAAATACGCCATCCGTTGGTCCTTCTTTTC
CCCATCAACCACCCCTCGAGGGATTCTTCTTGCTCCTTTTGTCCGAGCCGCCGAGCAATTCTTGGGAATTCCTGCTTCTC
CTTCCCTGTGCGGAATCTTCCAAACAAGGGGTGAAAAAGGGGG-ACGGAGAGGAAGAATCCGCCCTCCTCCCTTTTGCTT
TAGGATAACTACTATAAACT-GTTCTTAGTGGGGGTGCTAGAGAAAGGGGGCGAAATTGGGAGGGGATTGGAGGGAGGAG
CCGTCACATCCCATCCCTGGAC--------CTGCATGAGGAAGCATTGAGACAATGAGAGATGAGACTCCAACCAAGAAC
AGGGTAAGTGACCAGACTACACATCAATCAACAGCTACTAC---TACGCTACTATCTTCACAATTTTTCTGTGTCCATTC
TCTGATCTTGCTTTGGTTCTGATTGGTGCGGGGGAAAAGCTGTCCTGGTCCAAGACCATTGTTAGGAAGTGGTTCAACAT
CAAAACAAAAGCCAAGGACTTCCATTCAGATTATGGAGTCGAACAAGGTACTACATG------------------CTTTC
TTCTTGCTCGGTGTT---CTGGCTGTTGGATCATATAAATTTTCTGTTGTTTCCAGAAGCAAGTTTGACCTCCTGCTTCC
TGCTCCTATGTAGTGTAGTA-A--TTTTTTTGGTTATTGTTGCAGAAACAACCAAACGCATCCTTGAGACCTCAGTAAAA
ATGCAGTTTGTTTTTACTGCCCTTGTGCTAAAATTTTGCTCTGACTATTTCAGTGGGGATGCAGTGGAGGACCAGTTTCT
CAGAGAGGGATGTGTGCAAGACCAAGAAGAGCAGAACAGGTACTACATTTTGCTTGCGTCCTCAGTCCTCACAGTAACTA
TC---ACTGCATTTTCAGTTTTTTCACCCCTGTCCATGGGTGCAAAATTGACCGGTCAACATGGTGTCCTATGCCCAACC
GACTGAATTAACTCTACTTCTCGTCCTCCTT---AGAGAGGTTGCCCAGGAAGAACTCGGATCGGGACTGTCGAGCAGGA
AATGGGATCGACCGCGCCTACATCACAAACACGCAAGACTACAGGTATATAATGCTTCTGTACAACACGACCGATTCGCC
GATCATTGCGAAAGCGAAGTCAGTTTGATGTGACAATCCATGTAACCGTGTGCTTAGGGTCTTTGCTGGTACATGGAATG
TGGGAGGAAGGTCACCATCCAGTCATCTGAACCTGGAGGACTGGCTGCATACTTCTCCTGCTGCTGATATATACGTCATT
GGGTATAA-CTCTAAACTCATGCATTAACTTGAGCAGATATTCA---TTTGATGTATACAGCATAAACATCCTGAGAAAT
GGTACAAATGAATAATGAGAATGTTATTGTCCTATCAGGTTTCAGGAAATTGTTCCTTTGAATGCTGGCAACGTCCTGTT
GACCGAAGACAACGGTCCAGCGAAAAAGTGGGTTTCTCTTGTGAGAAAAACGCTAAATAATCTAGATCTCCAGGGCTCTG
CTGGGTACAACTACCACACCCCGTCGCCGGCTCCGGAACCTATCGCGGAGCTTAATGTTGATTTCGAGAGATCATCGAGG
AGACAAAAGAACTCTTCATTCTTCCATCGGCGTTCATTTCAGTCCTTGGGTCGAAGCTCAAGAATTGACATGATGGATCC
TCACTCCCTAGTGGACCGACGGTTCAGTGTTTGTGACCGGATTAGCTTTGGGAGCAGGCCGAGCGATGTTGACACCAGTA
TGAGGTGTGGTGGGTCCTCTGATGATGAGAATATGGACGAGGAATCACCTGGTGGCACCTTCTTCTCACCAATGCCATGT
GGATATGGTGCTCCACTATCAACAGATGACAATAACAGGCGGTTGGTAAACTCCAAGTAAGTATTCTTAACATGACTTAA
TTC-----------------------------------------------------------TTCCCACTGGAAAGTAAG
AACTGCTAATATTTCATTGAAATGTCTTGCAAGCTTC------TTCATTCATCACTTGGAATGG--ATAAAGTTCTTTGA
ACTGAAACTCAGATTTTCTATGACACAGCAGGTATTGCTTAGTTGCTAGCAAGCAAATGGTTGGAGTTTTCCTGATGGTA
TGGGTGCGGAGTGACATAAGGGAGCATGTGAAGAACTTGAAGGTGTCGTGTGTTGGTAGAGGCTTGATGGGATATCTTGG
AAATAAGGTACTGTTTGCTATTTATTACTCAGCTTTTCTAGGCGTGCAGTTGTCAATCTGAAGTTCGTTGTGTGCATTTA
TTTTTGATGGCACGTTTTTTTCTGGCTTTTTACATAGTTTTATATGACCCATTCCCTGTTTTT----TTAGGGATCAATA
TCAATCAGTATGTCTCTGCATCAGACAAGCTTCTGCTTTGTTTGCACACACTTAACATCAGGTCAAAAAGATGGCGATGA
ACTTAGAAGAAATGCGGATGTGGTGGAAATATTGAGAAAAACCAGATTCCCACATGCTCATGGTGCACGCGACGAGAAGT
GGCCAGAGACAATCCTTGACCATGAGTATGTTCTACTTCCAGCTCGGTTATACACAAGTAGAATAAAACTGTGAAAATGG
AACACCCGTATCTTGGG----GTCTCATATATTTTGTTTCTTTCAGTCGAATAATATGGCTCGGGGATTTGAATTACCGG
ATAGCGCTTTCCTATCGCTCTGTGAAGGCTTTGGTTGAGATGCACAATTGGAAACAATTGTTGGAAAAAGATCAGGTAAG
CCAT-----------------------------ATCATATGCCCCTTAAAGCAACTTGCGCAGCTATATTTTTTTGAAAC
GGAGGCAAAAGATTTGCCTCATCGATTAATTAAGCAGAAGAGAATTGCCCATCTTGCGCAGCTATTGCAATCACATTCTT
GGCCTCGTTTCTTACCTGAAAATTTTCTGCAACAGCTTCGTATAGAGCAAAGGTTTGGTCGGGTATTCGCGGGCTGGAAA
GAAGGCAGAATTTATTTTCCACCCACGTACAAGTACTCGTACAACTCCGACAGATACGCGGGCGATGATATGCATCCAAA
TGAGAAGCGGAGGACACCCGCATGGTAAAAATTCACAAATCAAACTTATT-GATGCATTATTACATCCAAGAATGCCTTC
TTCCCCTTTTACACCCTCCTTATTACTTTCACCTCAACGACAAACATTTTTCCTTTCTGAAGGTGCGATCGGATTTTATG
GTATGGCAGAGGCCTAAACCAACTATGTTACGTCCGCGGCGAGTCCAGATTCTCGGACCATAGACCCGTATACAGCATTT
TCACGGCGGAGGTTAAACTGCCGAGCCAGGCCCAGTTCGGCAGCTTCACTCGCTCCAGCTCCCTAATGGGGGTGGATGAA
GTGGCATACCCAACTTATCCACGCAGTTACACAGATATCAACTTTTACTGATTGTGCATCCCCATGGAGCCAAGGTTTGT
ATACTGCTACTACT---AGTATATTCACTGCATTGTCTCATTGTTTAAGCTGGCTGCTCTGTCAGCTTCACTGAATTCCA
TGTGAAGGCATTGTAT---TCATCATCATCATAGCTTCCTTGCAGACATTCTTTCTTCGGTGCCAGAGTAGGAGTAGACC
TGATGTGTCTGATGAAAACTTCATTCCTCCCAAGATTCCAGCAACTGGAATATTT-CCAGGCAACAGGTGGTTCTGAACT
GCTCTGCCCTTTCCCCACTCCAGTTTTTGTGCCCTCGGCATGCCTGGTGCTGTGATAGTACTCTATTATTTTTAATGG--
---------------------------AAAGTTTTGCTTGGGCTAAT----ACCTAAACCCTGACCGTTGTGCAGATTGC
AGATACTCTAGTCAAGAAGACGCCTTGTAATTCCAGATGTAGGTAGGTGTGATACATACACTATTAGTACTTGATACGTG
TCGTTTTCGAGAGA-AGTTTAAAGCTGGACCACTAATAATACCTTCCCACACTTTC-------TCTTTAGGAAGATTTGC
GCCGTT----CGTTCTGCACAGTTTTGATTGATTCTAACCATCGTCCCCGGCAGTGTCGGGCACAAATTTCGCTTGCAAA
CCAGAATGCA-------GGACGGCTCTGGCTCTGATTTAAGCTAGTAGATAGAGTAG---TCACTGACAGCTGAAGCTAA
TTTTGTGGCGTGCCATTTGGATTT---TTCCCCTTTTCCTGAGCGGTTTGTGACTCTGGAAGGGAAGTTTTTTTTTTACT
TGTCTCCCGATGTAA---------------------------AACAAGAGCCGCTTGGATCGGCTCAGCTC---------
-AGTCATTTTAGTGACCAAAAAGAAGAAAGAAACAGCCACCATTTGTACAGCATTG---TCATCATACCATCTGAACCTT
GG--------GCCGTCGTGCTGTGCCTGATGATATATTTATATTGATAGTG------CTACTGGAGTGTCCCGGCCCATG
CTTGGCAAGAAATGATCACCGGCACGGGCGCACACTTGTC----CATGCTTGTGCGCAAAGCAATGCTCCCTCCCTCCCT
CCCTCCCAGGGCAAAAGAAGAGAAAGTTTCACCCACAAGCCGCCTCTGCCT--
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S-------------------------S----------------------------
---------------------------------------------------------------------------SSS-S
S------------------------------------------------------------------S-------S----
S-------------------------------------------------------------------------------
-------S-------------------------------------------S----------------------------
-S----S-----------------------------S-------------------------------------------
--------------------------------------------------------------------------------
-----------SS----------------S-------------------------------------S---S-S------
--------SSSSS--------------------------S-------------------------S--------------
---S----------------------------------------------------------------------------
----------S--------------------S-----------S------------------------------------
---------------------------------------S--S--S----------------------------------
---------------------------------S----------------------------------------------
----------------------------------------------------------------------------S---
---------------S----------------------------------------------------------------
---------S------------------------------------------S--SSSSS---------S----S-----
---------------SSS---------------S------------------------------------------S---
-----SSS-----------SS----------S-------------------S--------------------S-------
----------------------------------------S---------------------------------------
-------------S------------------------------------------------------------------
-SSSS------------------------S-----S--------------S--------S---------S----------
--------------S----------------SSS------------------------S-----S---------------
-------------------------------------------------------S------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
----------------S---------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S--------S---------------------------------------------------------------------
--------------------------------------------------------------SSSS--------------
-------------------------------------------------------------------------S------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
-----S-----------------------------------------------S--------------------------
------------------------------------S-------------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S--SS-----------------
---------------------------------------------------------------S-------------S--
--------------------S----------------------------------S------------------------
-----S--------S--------------------------------------------S--------S-----S-----
-----------------------------------------------S---S-----------------------S----
--------------------------------------S--SS-S-----S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-------------------------------------------------------S------------SS-
---------S----------------------------------------------------------------------
-----------S-----------------------------------------------------------------S--
------S-SSSS-----------------------------------------------------------------S--
--------------S----S-----------S------------------------------------------------
-----------------------------------------S-----SSSS------S----------------------
-----------S----------S-------------------------S----S---------S----------------
-------S----------S----------SS---S-S---------------S-SSSSSSSSS-----------S-----
-------------------------------------------SS-SSSS---SSSSSSS---S----------------
----------S------S--SS-S-S------------S------S--SSS---------S-------------------
--------------S--------SSSS---S--------S----------------------------------------
----S----SS------------------------S-------------------------S------SSSSSSSS--S-
S-S---------------------------------------------------S-SSS-SS-SSSSS--SSSS-SSS-S
-SSSS---------------------------------------------------------------------------
-----------------------------------S----SSSS------------------------------------
--------------------------------------------S--------
>forward_811
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TGCTTCCTG
AATCTTGCGGA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1905
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----------------------------------------------------------------AGACTGTCGAGCAGGA
AACG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------
>forward_1873
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-------------ACTCCACCTGTCCTCCTTGT-----------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
>reverse_3034
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------AATGGTA
TGGGTGCGGAGTG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
>forward_1899
--------------------------------------------------------------------------------
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---------------------------------------GGTTGCCCAGGAAGAACTCC---------------------
--------------------------------------------------------------------------------
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>reverse_3995
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------CCCAAA
TGAGAAGCGGAGGA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------
>forward_3980
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----------------------------------------ACAACTCCGACAGATACGCA--------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
>reverse_5010
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-------------------------------------------------CGGACACAAACGCAACCAAA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
