>input_sequence_24504
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-----------------------------GCTTCCAACCCCACTTA---CCAGCCGGCAGCGCTAATCTCGTAACAAAAT
CCACCAATAGGATTCTAAGCTTTATTTCCCAGAGATTTTTATTCTATCTCTCTCTTTCCGCCGCTCCGCTCGTGCGTTCG
GCGCAACAGCAAACCGATCGCAATGCCTTGCGTGCCAGCTCCAATCTCCTAGCC--GCCGCCGCTCGCCCGCTCTCCAAT
CCGCCTCCATCTCCAACCGCAATCCTCCCCCGATTCTTCCGAGTTCAGTTACCACTGCCCGTACCACCACCACTACTTGA
ACCCACCGCCGTCAATCTGCGTCGGGG-TTTAGCAGCTCCGCCCGCCCGTCCCCAAAGGTCCGCTTTTTCTT----TCTC
CTTCACGAACTCGCAGTAAAAAGGAAATTCCGACTCCATCTTGAGTAGCGGCAGCGGTAGCAGAATTTAACAGGCGCCGC
ATCCTCGCCGTCGTCGCCAAAGATGTGACTCTGTTTTTCGATTATTATTGATTCTCTCATCGGCGGCGTAGAGCCTAAAT
TTCCGGCGTAACT--TTGGGTTGTCTCGCAGGTCCAGCGGCGAAGAGTAAAGGAACCTGCCCGGATTCAAAGCGGCGGCG
GGATCGGATTCCATCACTTGGATAAATTGCCACCGATCGGCTTTTTTCCTTCCTTCCGTCCGTCGGTGTGCCGGTGCGGC
GGCCGGGCAGCGAGAGGGGGAGTCCGAGGACAGGTGGGAACTAGAAGGCCGGTACTGCTGGCTCCTCCGTTTGGTTTGCA
GGGGAGGGGTTCAGTCAGATGGGGGCCATCATGTGCTGCTTACGCGGCCGCGGCCCCGGCCCCGGCGACGACGCGCCTGG
CTGCTGCTGCCTGCCATGGCCTTTCCTGAACAACGATCGCAACAACG------ACAACAACAACAGCAACAATCACAACT
CGGTATGTTTCTACCTATCTGTTTGTTTTGCCCGTCTTGTCTGGAGATATTTGGTGGAGTTGCGGTGATATAGACATGTG
ATGGATTTAGTCATGGTGTTGGTGAAATGCACGGAAATCGTGTTGCGGAGTGGCAGATGGTGGGTGGATTTTCCGTGTTC
GTGATCCTCGCATGCGCTAGTCATGCCCCAGGATCGCATTGCCGTGATCTCAGAATAGCGGATGTTCATTATTGTGTTCA
TTTAATTGCGTAACTTGTATCGGCTAACTGTAAATTAGTAGTAGTAGATAAACCATGAACGGATATTAGTAGTTTGCATG
GAGCCTATCCAGTTTTATTACCCTGAGACTTGTTTGACAGTCAGTCCAGAGGTGCTATTCTCAGAAGTTGGAACTGGACA
ACTCGGTACTCTATAAGTAAGATACTAACACCCAACTACAAATGGTCTGTCCGTGTAGCTTGAAAATTATTACAGTAGTA
AACAGTTTGGTATAATTA---ATGGTGCCACATTTGTCCATAATAATTCCATGTTCTGTCTGGACCTTCTGTTTCAGTCA
GCTGCTATGCACTAGTATCATCTAAATGTTTTATTCACCCACAGGGCGCTCCTGCTCGTCAACGAGCGAATACACGGGTT
GCGCCTGTTCAGGGAAGGGTTCCTCCTGCGGGTTCACGGCAGGATGATTCAATGAACACCTTCCGCTGCCCACCTAGGCC
TTTGCCTTATGATGATCCTCAATTCAGACATCAAACGGAGCGCCACCCGCTGGTGGCAGGACATGACAAGGCTTCAACGC
AATCCCAGAAATCTAAACTACTTGAAGAAAACAATGATGCTGATACCAGATCAACTTGTGCCGATCAGAAGGCTGATGGA
CCGTCCCTGAAAGATCAGTCGGGAGGTAAAAAAATCGGGGGAGCTCAAGTCTGTGTTCCTTCTGATTCTGAGGATGACTG
TCCAATATGCCTAGAAGGTCAGTGAAAACAATTACCTGTTTTACAACTCCTTCACTATTCAGAATTGCAGCATCTTGTAT
TTTCGCTCAGGGGGATTTACAATTTACACTTCTTCGCATATATCATATAAAGTAC-------------------------
---------------------------------------------------ACGAGAAAGAGAGCATCTGAAACATTCTT
GTGTCAGTTGCAAAAATA--------------------------------------------------------------
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---------------------TACGTATTTGTTCATTTTAATCATTATTGTTAATGAATATATGTCTTAATTAATCAGTT
CTCATTGATAGCTGGTTTGTTACCATTTTATCAAATTGCTGCCACGT----GAATACATCTACTCTGGCAATGGTAAAGG
AAAACAAATGTAGCATCCCATAACTCTGAATTTATATCCTTGTACTTTGTGCACAGTTGTTTGCTCTTCTTGTCTTCTGA
TTGTTTCTTATTTACAGAGTATGATTACGAGAATCCAAAGATAGTGCTTCAGTGCAACCATAATTTCCATCTTAGTTGCA
TTTACGAGTGGATGGAAAGAAGTCAATCTTGTGCGGTCTGTGCCAAGGTATTAAACTTATACGTAAACCCCCTTTTTTTC
ACCTGAGAAGGGAAGCATTAGTTGGTATTTGATCTAATCTGGCAAAAATCATGTCAAACATTTTGACTGCTGAACTGCTC
CATTGTAGGTAATGTTGTTTAAAGTGGACCAATAACCATGCTGGCTGCAATTCTTTACACATGCTGAAGACCCAGGACTG
AATTGCTTAGGTTGTGTACATAGCATCGGTGAAATCATGTCGCTAGATTGTTTGCTGAAACCTCTAGCGGTGCGAAGATT
CGGCTTTTCCTTCTAGAGCAG----TTCATGTTTCTCTTTTCTCCACGAATTTGATGATTTCTGCCAATGCACACCTGGC
ATTTTTCAAACTGATGTTACTTTGGTGAACGGTGGGTGATCGCATTGGCTTGACATGCTCAAGTATAATACTCTGGAAAC
CTCACAAGTTACATCCACTTCTTTGCCAATAGCTATTTTGACATCATTTCAATAGTTTCCATCTAGAACCATGTAGTTCT
AGAATCAAGATGCAGCGTATGCTCACCCCTAATGTATCGTTATTATTGAATGAGCAGTACATGATCTATCACAAGTTTAG
AAAGTTCAAATTGAACATGATTTAACAAGTAGAAACAAAATTGAGGTTTCTCAGACTTGAAATCACTAATTAATTAGGG-
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>chr3D_1_TraesCS3D01G332600
TAAGACAAGTAATATGGATCGGAGGGCGTAATTTTGAAATATGGTTTATCGGAGTTGCCATCAGGGTGCGAAACAGTACT
CCCTCCATCTTGAATTACTTGTCTTTAGTTTTGTGAAGAAACGATGTATCTAGACATGTATTTGTGTTAGAGATACATCC
ATATTTAGAAAATTTTAAGACAAATAATTTGAGACGAAGATAATAAATGACATGACAAAACAAAATTGAAAAATGCCATG
GCAAAACACATCTCAATTAAGCACGGCAATATGATTTAAGTTGCCATAGCAAAAGTCATTATTACATATATCTATTCCAC
TGCAATGACACACTGGAAGCAGAGATACATGCACTAATGCAGGGCATGGCCCTAGCCCTGCAACATATCGAGCTTCATGT
TGTCGCGCAGTCGGATTCGTCCATGGCATTGTCGATTTTCAGTGGTGATTCACTACTTCGGTCTCCATATACACGGTCAT
CTAGTTTTGGAGATTAATTCCCTCAGAGAGAACCGGGAGTTTATTCTGCAAAAGCTTCATAGTAGTCAGAATAGAGTTGC
AGATTGTCTGGCAAGATATAGTCGTGCTGAACGTAGCACAACGGTGTGGCTCCACAGAGGGTCCTCGTGTACTGAAATTC
TTGCCTCTTAATTGTAACTCTATTATATTGAAATAAAACTCTTTTATCCCCGCAGAAAAAGTCATTATCAAGTCAGTATG
CCCAACATGATATTCTTTTTTTTTTGCGGGGAGCCCAATATGATATTCTACTTGCCATGGCAACAAAAAATAT--ATGAA
AAATGTCGTGGCAACACATCTTAATTACACACACAAAAGAA---------------------------------------
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------------------------------------------------------------------TCCTGTAGATTTAC
TATCCACCGTAAGTCC--------------------------------------ATGTAAGAGTACACCATTAGACGGGG
ACGAAATCTTTCACGAAGAAAAGCAGAGTATCCAGAGATAAAAAGCAGG----GGGGCCTTGCAAAAGGCAGCGAAGGGT
GGTCCGCCAGGGAAAAATCATACTAGTCAGCTTCCAACCCCACTTA---CCAGCCGGCAGCGCTAATCTCGTAACAAAAT
CCACCAATAGGATTCTAAGCTTTATTTCCCAGAGATTTTTATTCTATCTCTCTCTTTCCGCCGCTCCGCTCGTGCGTTCG
GCGCAACAGCAAACCGATCGCAATGCCTTGCGTGCCAGCTCCAATCTCCTAGCC--GCCGCCGCTCGCCCGCTCTCCAAT
CCGCCTCCATCTCCAACCGCAATCCTCCCCCGATTCTTCCGAGTTCAGTTACCACTGCCCGTACCACCACCACTACTTGA
ACCCACCGCCGTCAATCTGCGTCGGGG-TTTAGCAGCTCCGCCCGCCCGTCCCCAAAGGTCCGCTTTTTCTT----TCTC
CTTCACGAACTCGCAGTAAAAAGGAAATTCCGACTCCATCTTGAGTAGCGGCAGCGGTAGCAGAATTTAACAGGCGCCGC
ATCCTCGCCGTCGTCGCCAAAGATGTGACTCTGTTTTTCGATTATTATTGATTCTCTCATCGGCGGCGTAGAGCCTAAAT
TTCCGGCGTAACT--TTGGGTTGTCTCGCAGGTCCAGCGGCGAAGAGTAAAGGAACCTGCCCGGATTCAAAGCGGCGGCG
GGATCGGATTCCATCACTTGGATAAATTGCCACCGATCGGCTTTTTTCCTTCCTTCCGTCCGTCGGTGTGCCGGTGCGGC
GGCCGGGCAGCGAGAGGGGGAGTCCGAGGACAGGTGGGAACTAGAAGGCCGGTACTGCTGGCTCCTCCGTTTGGTTTGCA
GGGGAGGGGTTCAGTCAGATGGGGGCCATCATGTGCTGCTTACGCGGCCGCGGCCCCGGCCCCGGCGACGACGCGCCTGG
CTGCTGCTGCCTGCCATGGCCTTTCCTGAACAACGATCGCAACAACG------ACAACAACAACAGCAACAATCACAACT
CGGTATGTTTCTACCTATCTGTTTGTTTTGCCCGTCTTGTCTGGAGATATTTGGTGGAGTTGCGGTGATATAGACATGTG
ATGGATTTAGTCATGGTGTTGGTGAAATGCACGGAAATCGTGTTGCGGAGTGGCAGATGGTGGGTGGATTTTCCGTGTTC
GTGATCCTCGCATGCGCTAGTCATGCCCCAGGATCGCATTGCCGTGATCTCAGAATAGCGGATGTTCATTATTGTGTTCA
TTTAATTGCGTAACTTGTATCGGCTAACTGTAAATTAGTAGTAGTAGATAAACCATGAACGGATATTAGTAGTTTGCATG
GAGCCTATCCAGTTTTATTACCCTGAGACTTGTTTGACAGTCAGTCCAGAGGTGCTATTCTCAGAAGTTGGAACTGGACA
ACTCGGTACTCTATAAGTAAGATACTAACACCCAACTACAAATGGTCTGTCCGTGTAGCTTGAAAATTATTACAGTAGTA
AACAGTTTGGTATAATTA---ATGGTGCCACATTTGTCCATAATAATTCCATGTTCTGTCTGGACCTTCTGTTTCAGTCA
GCTGCTATGCACTAGTATCATCTAAATGTTTTATTCACCCACAGGGCGCTCCTGCTCGTCAACGAGCGAATACACGGGTT
GCGCCTGTTCAGGGAAGGGTTCCTCCTGCGGGTTCACGGCAGGATGATTCAATGAACACCTTCCGCTGCCCACCTAGGCC
TTTGCCTTATGATGATCCTCAATTCAGACATCAAACGGAGCGCCACCCGCTGGTGGCAGGACATGACAAGGCTTCAACGC
AATCCCAGAAATCTAAACTACTTGAAGAAAACAATGATGCTGATACCAGATCAACTTGTGCCGATCAGAAGGCTGATGGA
CCGTCCCTGAAAGATCAGTCGGGAGGTAAAAAAATCGGGGGAGCTCAAGTCTGTGTTCCTTCTGATTCTGAGGATGACTG
TCCAATATGCCTAGAAGGTCAGTGAAAACAATTACCTGTTTTACAACTCCTTCACTATTCAGAATTGCAGCATCTTGTAT
TTTCGCTCAGGGGGATTTACAATTTACACTTCTTCGCATATATCATATAAAGTAC-------------------------
---------------------------------------------------ACGAGAAAGAGAGCATCTGAAACATTCTT
GTGTCAGTTGCAAAAATA--------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TACGTATTTGTTCATTTTAATCATTATTGTTAATGAATATATGTCTTAATTAATCAGTT
CTCATTGATAGCTGGTTTGTTACCATTTTATCAAATTGCTGCCACGT----GAATACATCTACTCTGGCAATGGTAAAGG
AAAACAAATGTAGCATCCCATAACTCTGAATTTATATCCTTGTACTTTGTGCACAGTTGTTTGCTCTTCTTGTCTTCTGA
TTGTTTCTTATTTACAGAGTATGATTACGAGAATCCAAAGATAGTGCTTCAGTGCAACCATAATTTCCATCTTAGTTGCA
TTTACGAGTGGATGGAAAGAAGTCAATCTTGTGCGGTCTGTGCCAAGGTATTAAACTTATACGTAAACCCCCTTTTTTTC
ACCTGAGAAGGGAAGCATTAGTTGGTATTTGATCTAATCTGGCAAAAATCATGTCAAACATTTTGACTGCTGAACTGCTC
CATTGTAGGTAATGTTGTTTAAAGTGGACCAATAACCATGCTGGCTGCAATTCTTTACACATGCTGAAGACCCAGGACTG
AATTGCTTAGGTTGTGTACATAGCATCGGTGAAATCATGTCGCTAGATTGTTTGCTGAAACCTCTAGCGGTGCGAAGATT
CGGCTTTTCCTTCTAGAGCAG----TTCATGTTTCTCTTTTCTCCACGAATTTGATGATTTCTGCCAATGCACACCTGGC
ATTTTTCAAACTGATGTTACTTTGGTGAACGGTGGGTGATCGCATTGGCTTGACATGCTCAAGTATAATACTCTGGAAAC
CTCACAAGTTACATCCACTTCTTTGCCAATAGCTATTTTGACATCATTTCAATAGTTTCCATCTAGAACCATGTAGTTCT
AGAATCAAGATGCAGCGTATGCTCACCCCTAATGTATCGTTATTATTGAATGAGCAGTACATGATCTATCACAAGTTTAG
AAAGTTCAAATTGAACATGATTTAACAAGTAGAAACAAAATTGAGGTTTCTCAGACTTGAAATCACTAATTAATTAGGGG
ATACCCCTTGCAAAGGTCAATACCACCTCCTCTGGTGGTGACAAGTGGGCATGTGCACCACTTATCGCAACCACGGAGTT
TTGGTGTGTTTTCTCACCAAGCGCTTAAGGATGTGAGGTTTTCTGTTTGTGTCTTTTTTTTTTCTTCTT--------CTT
GGATTCGTTTGTTTCAAAATGATTTATCACTCGTACCGCTTGTCCAAATTATGAACCGCTTTCACCTTTGTGTTTCTCGC
GCCTAGGTTTTCAAAACTCGATCCACTTTGATAGGTTTCGATGAACAG--TTTTCTGCAAAATCTATGCTCCAAGCTGTA
CTAATCCATGCTTCAAAACTGACTAAAATGTGCTTCAAACTATACTAAGGTGTGCTTCACTTTTTTTGGGACGCACGGTC
GCTTTTTCACATGAGTAGCACATGT-GTGCTTCACACGAAAAACCAAAATAAAAGAACCGAAGATAGAAAAAACTGGAAA
TAGAAAATACATAAACAAAAAACAAAGATCGAAAAAATGGAAATTAAAAAACCAGGAACCATAAAAAAATCAGAAATACA
AAAGTGGAGACCAAAAAAAGCTGAAAACCAAGCGATAAACCAGAACCATAAAAAATGAAAACAAAAAATATACTTGAGGC
AAAAACATAGTTGATAGTTGTGTTTTCACGCAGAAGCACAACTATGCTTCACGTAGAACGACACGTGTGCTTTATCTTTT
TAGAGAAGCACAACCGTGTTTCACTTTCAAGAGAAGC-AAACTGTGCTTACAACTACGAAAAGGTAAATCCCGAACGCTT
GGATTTTGCCAATGGCAATCAAATGTTTTTTATGACAACTTTAGTTGACGCAAGGATGTCAATTTTAGTTGGCACGCATG
ACAATTTTCTATCAAAAACAAATCGCGGGTGAAATTGCCATGGTTACCAACCAAACTTGTTATCCCCGCATCAACTATAT
TTATCATAAAAAA-CATTTGATTTGTCATGGGCAACATGCGAACGTTCAGGG----------------------------
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>chr3B_126
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---------------------------------------------GTATCTAGACATGTTTTAGTGTTG--GATATATCC
GTGTCTAGAAAAATGTAAGACAAGCAATTTGAGATGGAGGTAATAAATGATATGAAAAAACAAATTTGAAAAATGCCATG
GCAAAACACATCTCAATTAAGCACACCAATATGATTTAAGTTGCCATAGCG-----------------------------
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---------------------------------------------------------AAACTCATTATCAAGTTAGTATG
TCCAACATGATAC---------------------------------TCTACTTGCCATGGCAACAAGAAATATGTATGAA
AAATATTGTGGCAAGACATCTTAATCTATACCTACTGATAAAGTACGAAACACTTCTACCTTCCAACGTCGCGTCTTTTT
TTGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTCCCGGTTTACGTGATTCTAGAGATAATGTTTCACTATTTTTGGAAAG
TCCCTTGCATTTCCCTCAAAACAACCCGCAGGTTTAAGTGACTCCAGAAAAATTGTGTGTTGTTTGCGGAAAACATCCTG
ACATTTGGTTTAATTAACCAGTAGTACATACCATATGTTTTTTAAAATAGTCATACCTTTTAAACCGTAACTCTGATTTT
AACATATTATATATAAAATTTGATTAAAAACATTGTAGAATCTGAATATGATGTTATTTTACCCGTTAACCCGAACCAAC
CTGTGGTTGGATGGTTAGAGGAACCGTGGTATCCCCAACCCACCAGGGTTCAAATCCTGGTGCTCGCAGAGACGTTCCCG
TCGATGATGAGGTGCTTACGATGACTTCGTAAATTTCAAGATGATATGCCGGTTCAATCTTTCAGAGGTGCTCATAGGGG
TAGGGTGTGGGTGTGTGTTCATAGGGATGAGTGTATGCGCGTGTATATGAGCGCTTGCTGTACTGTGTTTAAAAAACCAT
TTAAAAATGTTATTTAGGGCGATGCCTTAATCATAGTGTAGTCCCGGTTTAAGTGATTCCAGAGATAATGTTTCACTATA
TGTGAAAAAACCCTTGTAGTTTCCTCAAATTAACCCGCAGTCGAGGTTTGAGTGACTCCAGAAAAACCGTTCGTTGTTTG
CGAAAAACACCCTAACATTTGGTTTAATTAAGCCGCAATACATATCATACATTAAAAAAAATAGTTCATATCTTTTAAAC
TGCAACTTCAATTGTAAAATATTATATATGAAATTTGATTATTTTTTATAGAATTCAAATATGATGTTATTTTACGTGTT
AGCAATTAAAAAATGTTATTTTAGGGTGATCCCTTAACCAATAGTGCACGATCCGCCTCTCTTTTGTATTGGTGTAGATC
CGGATTGTAAATGAACACCATAGTAATTTTAGATCGGATACAAAAGAAATCATTTGTAACAACACATGGATGCGTCGGCA
AAACCTCGCACGGGAAAAAGGAAAGCAAATTTCTCATGTTATGTGAAGAGAAACATTTTAGAATTGACCACATTCAAACA
CACTGTGAGTGTGTGAGCATTGATGCCACCATCGACGATGATGGAAGGAGGATAAGCGGCAACACAAATGGGATGCTGTT
TTCGAATAAATAACATGGATCTATTGGAGTCTTGAGTCACGGTTATTAGATAGGCCCATCTGAACTTCGTGTAGATTTAC
AATCTTCCGGATCAAAGCCTATGTAAGAGTATTCGCAAAAAAAAAAAATAGCCTATGCAAGAGTACACCATTAGACGGGG
CCGAAATCTCTG--GAACAAAAGCAGAGTATCCAGAGATAGATA--AAAAGCAGGGACTTTGCAAAAGGTAGCG-AGGGT
G----GCCAGGGAAAAATCATA---GTCAGCTTCCACCCCCACTTATAACCAGCCGGCAGCGCTAATCTCGTAACAAAAT
CCACCAATAGGATTCTAAACTTTATTCCGG-GAGATTTTTATTCTATCTCTCTCTTTCCGCCGCTCCGCCCGTGCGTTCG
GCGCAACAGCAAACCGATCGCAATGCCTTGCGTGCCAGCTCCAATCTCCTAGCCCCGCCGCTGCTCGC------------
---------TCTCCAACCGCAATCCTCCCCCGATTCTTCCGAGTTCAGTTACCACTGCCCGTACCACCACCACTACTTGA
ACCCGCCGCCGTCAATCTGCGTCGGGGGTTTAGCAGCTCCGCCCGTCCGTCCCCAAAGGTCCGCCT----TT----TCTC
CTTCACCAACTCGCAGTGAAAAGGAAATTCCGGTTCCATCTTG------------GGTAGCAGAATTTAACTGGCGCCGC
ATGCTCGCCGTCG---CCGACGATGTGACCCTGTTTTTTTTCTTCTATCGATCCTCTCGCCGGCGGCGCAGGGCCTAAAT
TTGCGGCGTAGTAACTTGGGTTGTTTCGCAGGTCCAGCGGCGAAGAGTAAAGGAGCCTGCCCGGATTCTAAGCGGCGG--
-GATCGGATTCCATCCCTTGGATAAATTGCCACCGATCGGCTTTTTTCCTTCCTTCCTTCCGCCGGTGTGCCGGTGCGAC
GGCCGGGTAGCGAGAGGGGAGGTCCGAGGATAGGTGG-AACTAGAAGGCCGGTACTACTGGCTCCTCCGTTTGGTTTGCA
GGGGAGGGGTTCAGTCAGATGGGGGCCATCATGTGCTGCTTACGCGGCCGCGGCC------CCGGCGACGACGCGCCTGG
CTGCTGCTGCCTGCCATGGCCTTTCCTGAACAACGATCGCAACAACG------ACAACAACAACAC---CAATCACAACT
CGGTATGCTTTTACCTATCTGTTTGTTTTGCCCGTCTTGTCTGGAGATATTTGGTGCAGTTGCGGTGATATAGACATGTG
ATGGATTTAGTCATGGTGTTGGTGAAATGCACGGAACTTGTGTTGCGGAGTGGCAGTTGGTGGGTGGATTTTCCATGTTC
GTGATCCTCGCATTCGGCAGTCATGTCCCAGGATCGCATTGCCGTGATCTCAGAATAGCAAATGTTCATTATTGTGTTCA
TTTAATTGCGTAACTTGTAGCGGCTAACTGTAAATTAGTAGAT----ATAAACCATGAACGGATATTAGTAGTTTGCATG
GAGCCTATCCAGTTTTATTACCCTGAGACTTGTTTGACAGTCAGTTCAGAGGTGCTATTCTCAGAAGTTGGAACTGGACA
ACTCGGTACTGAATAAGTAAGATACTAACACCCAACTACAAATGGTCTGTCCGTGTAGCTTCAAAATTATTACAGTACTA
AACAATTTGGTATACTTA---ATGATGTCACATTTGTCCAGAATAATTGCATGTTCTGTCTGGACCTTCTGTTTCAGTCA
GCTGCTATGCACTAGTACCATCTAAATGTTTTATCCCCCCACAGGGCCCTCCTGCTCGTCAAAGAGCGAATACACGGGTT
GCGCCTGTTCAGGGAAGGGTTCCTCCTGCGGGTTCACGGCAGGATGATTCAATGAACACCTTCCGCTGCCCTCCTAGGCC
TTTGCCTTATGATGATCCTCAATTCAGACATCAAACGGAGCGCCACCCGCTGGTGGCAGGACGTGACAAGGCTTCAACAC
AATCCCAGAAATCTAATCTACTTGAAGAAAGCAATGATGCTGATACCAGATCAACTTGTGCCGATGAGAAGGCTGATGGA
TCGTCCCTGAAAGCTGAGTCGGGAGGTAAAAAACTCGGGGGAGCTAAGGTCTGTGTTCCTTCTGATTGTGAGGATGACTG
TCCAATATGCCTAGAAGGTCAGTGAAAACAATTACCTGTTTTACAACTCCTTCAATATTCAGAATTGCAGCATCTTGTA-
----GCTCAGTGGGATTTAAAATTTACACTTC---GCATATAAAGTACTCCCTCTGTAAACTAATATAAGAGCATTTAGA
TTACTAAAATAGTGATCTAAACGCTCTTATATTAGTTTACGGAGGGAGTACACGAGAAAGAGAGCATCTGAAACATTCTT
GTGTCAGTTGCAAAAATA--------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TACGTATTTGTTCATTTTAATCATTATTGTTAATGA--ATATGTCTTAATTAATCAGTT
CTCATTGATAGCTAGTTTGTTACCCTTTTATCAAATTGCTGCCACGTACGTGAATACATCTACTCTGGCAATGGTAAAGG
AAAACAAATGTAGCATTCCATAACCCTGATATTATATCCTTGTACTTTGTGCACAGTTGTTCGCTCTTCTTGTCTTCTGA
TTGTTTCTTATTTGCAGAGTATGATTACGAGAATCCAAAGGTAGTGCTTCAGTGCAACCATAATTTCCATCTTAGTTGCA
TTTACGAGTGGATGGAAAGAAGTCAATCTTGTGCTGTCTGTGCCAAGGTATTAAACTTCTACCTAAAACCCCTTC-TTTC
ACCTGAGAAGGGAAGCATTAGTTGGTATTTGATCTAATCTGGCAAAAATCATGTCAAACATTTTGACTGCTGAACTGCTC
CATTGTAGGTAATGTTGTTTAAAGAGGACCAATAACCATGCTGGCTGCAATTCTTTACACATACTGAAGACCCAGGACTG
AATCGCTTAGGTTGTGTACATAGCA-CGGTGAAATCATGTCGCTAGATTGTTTGCTGAAACCTCTAGCGGTGCGAAGATT
CGGCATTTCCTTCTAGAGCAGACAATTCATGTTTCTCTTTTCTCCACGAATTTGATGATTTCTGCCAACGCACACCTGGC
ATTTTTCAAACTGATGTTACTTTGGTGAACGGTGGGTGATCGCATTGGCTTGACATGCTCAAGTATAATACTCTGGAAAC
TTCACAAGTTACATCCACTTCTTTGCCAATAGCTATTTTGACATCATTTCAACAGCTTCCATCTAGAACCATGTAGTTCG
AGAATCAAGATGCAGTGTATGCTCACCCCTAACATATCGTTATTATTGAATGAGTAGTACATGATTTATCACAAGTTTAG
GAAGTTCAAATTCAGCATGATTTATCAAGTAGAAACAGAACTGAGGTTTCTGAGACTTGAAATCACTAATTAATTAGGGG
ATACCCCTTGGAAAGGTCAATACCACCTCCTCTGGTGGTGACAAGTGGGCATGTGCACCACTTATCGCAACCACGGAGTT
TTGGTGGGTTTTCTCACCTCGCGCTCGAGGATGTGAGGTTTTCTGTTTGTGTTTTT-----------TT--------CTT
AGATTTGTTTTTTTCAAAATGATTTATCACTCGAACCGCGTGTCCAAATCATCAACCGCTTTCACCGCTGTGCTTCTCGC
GTCTAGGTTTTCAAAACTCGATCCATGTTGATAGTTTTCGATGAACATTTTTTTCTGCAAAATCTATGCTCCAAGCTGTA
CTAGTCCGTGCTTCAAAACTGACTAAAATGTGCTTCAAACAATACTAAGGTGTACTTCACTTTTTTTGTGACCCACAGTC
GCTTTTTCACACGAGTAGCACAATGGGTGCTTCACATGAAAAACCAAAATAAAAGAGCCGGAGATAGAAAAAACTGCAAA
TAGAAAATACATAAATAAAAAACAAAGATATTGTCGAAAGTATTAAACTTCTACCTAAAACC------------------
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--------------------------------------CCTTCTTTCACCTGAGAATGGAAGCATTAGTTG---------
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-------------ATATTTGATCTGATCTGGCAAAAATCATGTCAAACATTTTGACTGTTGAACTGCTCCATTGTAGCCT
GTAGGTAATGTTGTTTAAAGAGGACCAATAACCATGCTGGCTGCAATTCTTTACACATGCTGAAGACCCAGGAGTGAATC
GCTTTAGTCAGTGAAATCATGTCACTAGATTGTTTGTTGAAACCTCTAGCAGTGCGAAGATTCGGCTTTTCCTTCTAGAG
TAGACAGTTCATGTTTCTCTTTTCTCCACGAATTTGATGATTTCTGCCAACACACACCTAATATTTCAATTACTTTTGTG
AACAGTGGGTGATCGCACTGGCTTGACATGCTCAACTATGATACTCTGGAAACTTCACAACTTGCATCCACTTCTTTGCC
AATAGCTATTTTGACATCATTTCAATAGTTTCCATCTAGAACCATGTAGTTTTAGAATCAAGATGCAGCGTATGCTCACC
CCCAATCGTAT
>chr3A_904
TTTCGCAAA-----------------------------------------------------------------------
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------------------AAAAGCAGAGTATCCAGAGATAGATATAAAAAGCAGGGACCTTGCAAAAGGCAGCG-AGGGT
GGTCCGCCAGGGAAAAATCATA---GTCAGCTTCCACCCCCACTTA---CCAGCCGGCAGCGCTAATCTCGTAACAAAAC
CCACCAATAGGATTCTAAGCTTTATTTCCCAGAGATTTTTATTCTATCTCTCTCTTTCCGCCGCTCCGCCCGTGCGTTCG
GCGCAACAGCAAACCGATCGCAATGCCTTGCGTGCCAGCTCCAATCTCCTAGCC--GCCGCCGCTCG------------T
CCGCCTGCATCTCCAACCGCAATCCTCCCCCGATTCTCCCGAGTTCAGTTACCACTGCCCGTACCACCACCACTACTTGA
ACCCACCGCCGTCAATCTGCGTCGGGG-TTTAGCAGCTCCGCCCGTCCGTCCCCAAAGGTCCGCCT----TTTCTTTCTC
CTTCACAAACTCGCAGTCAAAAGGAAATTCCGACTCCATCTTGAGTAGCGGCAGCGGTAGCAGAATTTAAGTGGCGCCGC
ATACTCGCCGTCGTCGCCAAAGATGTGACTCTGTTTTTCGATTATTGTTGATTCTCTCATCGGCGGCGTAGAGCCTAAAT
TTCCGGCGTAACT--TTGGGTTGTTTCGCAGGTCCAGCGGCGAAGAGTAAAGGAACCTGCCCGGATTCAAAGCGACGG--
-GATCGGATTCCATCCCGTGGATAAATTGCCACCGATCGCCTTTTTTCCTTCCTTCCTTCCGTCGGTGTGCCGGTGCGGC
GGCCGGGTAGCGAGAGGGGAGGTCCAAGGATAGGTGGGAACTAGAAGGCCGGTACTGCTGGCTCCTCCGTTTGGTTTGCA
GGGGAGGGGTTCAGTCAGATGGGGGCCATCATGTGCTGCTTACGCGGCCGCGGCC------CCGGCGACGACGCGCCTGG
CTGCTGCTGCCTGCCATGGCCTTTCCTGAACAACGATCGCAACAACGATAACAACAACAACAACAG---CAATCACAACT
CGGTATGCTTTTACCTATCTGTTTGTTTTGTACGTCTTGTCTGGAGATATTTGGTGCAGTTGCGGTGATATAGACATGTG
ATGGATTTAGTCATGGTGTTGGTGAAATGCACGGAACTTGTGTTGCGTAGTGGCAGATGGTGGGTGGATTTTCCGTCTTC
CCGATCCTCGCATGCGCTAGTCATGCCCCAGGATCGCATTGCCGTGATCTCAGAATAGCGGATGTTCATTATTGTGTTCA
TTTAATTGCGTAATTTGTAAAT----------------TAGTAGTAGATAAACCATGAACGGATATTAGTAGTTTGCATG
GAGCCTATCTGGTTTTATTACCCTGAGACTTGTTTGACAGTTG----AGAGCTGCTATTCTCAGAAGTTGGAAGTGGACA
ACTCGGTACTGAATAAGTAAGATACTAACACCCAATTACAAACGGCCAGTCCGTGTAGCTTGAAAATTATTACAGTACTA
AACAGTTTGGTATACTTATTAATGGTGCCACATTTGTCCAGAATAATTGCATGTTCTGTCTGGACCTTCTGTTTCAGTCA
GCTGCTATGCACTGGTATCATCTAAATGTTTTATTCCCCCACAGGGCGGTCCTGCTCGTCAAAGAGCAAATACACGGGTT
GCGCCTGTTCAGGGAAGGGTTCCTCCTGCGGGTTCACGGCAGGATGATTCAATGAACACCTTCCGCTGCCCTCCTAGGCC
TTTGCCTTATGATGATCCTCAATTCAGACATCAAACGGAGCGCCACCCGCTGGTGGCAGGACATAACAAGGCTTCAACGC
AATCCCAGAAATCTAAACTACTTGAAGAAAACAATGATGCTGATACCAGATCAACTTGTGCCGATCAGAAGGCTGATGGA
CCGTCCCTGAAAGCTGAGTCGGGAGGTAAAAAGATCGGGGGAGCTCAAGTCTGTGTTCCTTCTGATTCTGAGGATGATTG
TCCAATATGCCTAGAAGGTCAGTGAAAACAATTACCTGTTTTACAACTCCTTCACTATTCAGAATTGCAGCATCTTGTAT
TTTCGCTCTGGGGGATTTACAATTTACACTTC---GCATATATCATATAAAGTAC-------------------------
---------------------------------------------------ACAAGAAAGAGAGAATCTGAAACATTATT
GTGTCAGTTGCAAAAATATACTCCCTCCGTTCCTAAATATTTGTCTTTTTAGAGATTTCAAATGGACTACCACATACAGA
TGTATATAGACATATTTTAGAGTGTAGATTCACTCATTTTGCTCCGTATGTAGTCACTTGTTGAAATCTCTAGAAAGACA
AATATTTAGAAACGGAGGGAGTACGTGTTTGTTCATTTTAATCATTATTGTTAATGA--ATATGTCTTAATTAATCAGTT
CTCATTGATAGCTGGTTTGTTATCATTTTATCAAATTGCTGCCACGT----GAATACATCTACTCTGGCAATGGTAAAGG
AAAACAAATGTAGCATTCCATAACTCTGAATTTATATCCTTGTACTTTGTGCAGAGTTGTTTGCTCTTCTTGTCTTCTGA
TTGTTTCTTATTTACAGAGTATGATTACGAGAATCCAAAGATAGTGCTTCAGTGCAACCATAATTTCCATCTTAGTTGCA
TTTACGAGTGGATGGAAAGAAGTCAATCTTGTGCGGTCTGTGCCAAGGTATTAAACTTATACGTAAAATCCCTTTTTTTC
ACCTGAGAAGGGAAGCATTAGTAGGTATTTGATCTAATCTGGCAAAAATCATGTCAAACATTTTGACTGCTGAACTGCTC
CATTGTAGGTAATGTTGTTTAAAGAGGACCAATAA-CATGCTGGCTGCAATTCTTTACACATGCTGAAGACCCAGGACTG
AATTGCTTAGGTTGTGTACATAGCATTGGTGAAATCATGTCGCTAGATTGTTTGCTGAAACCTCTAGCGGTGCGAAGATT
TGGCTTTTCCTTCTAGAGCAG----TTCATGTTTCTCTTTTCTCCACGAATTTAATGATTTCTGCCAATGCACACCTGGC
ATTTTTCAAACTGATGTTACTTTGGTGAACGGTGGGTGATCGCACTGGCTTGACATGCTCAAGTATAATGCTCTGGAAAC
TTCACAAGTTACATCCACTTCTTTGCCAATAGCTATTTTGACATCATTTCAATAGTTTCCATCTAGAACCATGTAGTTCT
AGAATCAAGATGCAGCGTATGCTTACCCCTAGTGTATCGTTATTATTGAATGAGT-------------------------
-----TCAAATTGAGCATGATTTATCAAGTAGAAACAAAATTGAGGTTTCTCAGACTTGAAATCACCAATTAATTAGGGG
ATACC-CTTGCAAAGGTCAATACCACCTCCTCTGGTGGTGACAAGTGGGCATGTGAAC---------CAACCACGGAGTT
TTGGTGTGTTTTCTCACAAAGCGCTTGAGGATGTGAGGTTTTCTGTTTGTGTCTTT-----------TTTTCTTCTTCTT
AGATTCGTTTGTTTCAAAATGATTTATCACTCGTACCGCGTGTCCAAATGATGAACCGCTTTCACCTTTGTGTTTCTCGC
GCCTAGGTTTTCAAAACTCGGTCCACTTTGGTAGGTTTTGATGAACAG--TTTTCTGCAAAATCTATGCTCCAAGCTGTA
CTAATCCATGCTTCAAAACTGACTAAAATGTGCTTCAAACTATACTAAGGTGTGCTTCACTTTTTTTGGGACGCACAGTC
GCTTTTTCACATGAGTAGCACATGT-GTGCTTCACACGAAAAACCAAAATAAAAGAACCGAAGATAGAAAAAACTGCAAA
TAGAAAATACATAAACAAAAAACAAAGATCAAAAAAATGGAAATTAAAAAACCAGGAACCATAAAAAAATCAGAAATACA
AAAGTGGAGACCAAAAAAAGCTGAAAACCAAGCGATAAACCAGAACAATAAAAAATGAAAAAAAAA----TAGTTGAGGC
GAAAACATAGTTGATAGTTGTGTTTTCACGTAAAAGCACAACTATGCTTCACGTAGAACGACACGTGTGCTTTATCTTTT
TAGAGAAGCACAACCGTGTTTCACTTTCTAGAGAAGCAAAACTGTGGTTACAACTACGAAAAGATAAATCCCGAACGCTT
GGATTTTGCCAATGGCAATCAAATCTTTTTTATGACAACCTTAGTTGACGCGAGGATGGCAAATTTAGTTGGCACCCATG
ACAATTTTCTATCAAAAATAACTCACGGGTGAAATTGCCATGGTTACCAACCAAACTTGTTATCCCCGCATCAACTATAT
TTATCATAAAAAAACATTTGATTTGTCATGGGCAAAATCCGAACGTTCGGGG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>SNPs
-SSSS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S--S-----SSS----S----
S-S-S-------S-S--------SS---------S-S--S----------S----S--------S---------------
------------------------SS------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S------------S------
S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S-------------
----S-S-------S----------SSSSSS-SSSSS-S-----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------S-----------
S---SS---S-SSSSS-----------------------------------------S----------------------
S--------S-SSS---S----------------------S-S-SS-SS-------S-----------------S-----
----------------------SSS-----------S-------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------SSSSSSSSSSS-
------S-------------------------------------------------------------------------
---------------------------------------------S------------------S-SSSS----------
------S----------S-----------------------------------------------------S--------
--S-----------------------------------------------------------------------------
------------------------S-----------------------------------------------------SS
S--------------S-----------------------------------------S----------------------
-------S-----------SS---------S-------------------------------------------------
-------------------------------------------------------SSSSSS-------------------
------------------------------------------------------------------SSS-----------
-------S--S---------------------------------------------S-----------------------
------------------------------------S-S-----------------------------------------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
---------------------------------------------S----------------------------------
----------SS-----------------------------------------------------------------S--
--------------S-------------------------S-------S-------------------------------
------------------------------------S-------------------------S-----------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S-S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------SSS---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------SS---------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
------------------------------------------------------S----------S--------------
S-------------S---------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------SSSSSSSSSSS-------------
S--------------------------------------S---------S------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
----------------------------------------------------------------------------S---
------------------------------S-------------------------------------------------
----------------------------------------------S--------------S----SSSS--S-------
S-----------------------------S-S-----------------------------------------------
----------------------------S-----------------S----------------S----------------
------------------------S--------------S-----------S------S---S------------S----
------------------S--S--S-------------------------------------------------------
-----------------------------------S--S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_761
--------------------------------------------------------------------------------
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---------------------TTTTGCGGGGAGCCCAATAT---------------------------------------
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>reverse_3311
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------------------------------CAGGTGGGAACTAGAAGGCC------------------------------
--------------------------------------------------------------------------------
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>forward_3043
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---------------------------------------------------------------AATTTAACAGGCGCCGC
ATC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4143
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--------------------------------------------------------------CGAGCGAATACACGGGTT
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_3145
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-----CGGCGTAACTTTGGGTTGTC-------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_5057
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----------------CCCATAACTCTGAATTTATATCCTTGT-------------------------------------
--------------------------------------------------------------------------------
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>forward_4414
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--------------------------------------------------------------------------GATGGA
CCGTCCCTGAAAGA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_6317
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------------GGTC
GCTTTTTCACATGAGTAGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
